HHsearch results for GI: 254780346 and protein with PDBid: 3c3k_A
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.99A {Actinobacillus succinogenes 130Z}
Probab=94.58 E-value=0.13 Score=29.77 Aligned_cols=124 Identities=19% Similarity=0.178 Sum_probs=62.4
Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHH
Q ss_conf 71799980312899999999999999987995555530014422699999986331137853566541200066524678
Q gi|254780346|r 6 PHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSIVTPGVLEIPAAVSMVMNAKTRSVTYDGIIVLGVVMRGKTAHCDV 85 (149)
Q Consensus 6 ~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i~VPGa~EiP~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~H~e~ 85 (149)
.||+++...-.......-+.|+.+.+.+++.+.+.+.+.+.++.....+..........++|++++. .|.
T Consensus 125 ~~i~~i~~~~~~~~~~~R~~gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~~----------~d~ 194 (285)
T 3c3k_A 125 KRIALINHDLAYQYAQHRESGYLNRLKFHGLDYSRISYAENLDYMAGKLATFSLLKSAVKPDAIFAI----------SDV 194 (285)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHHHHHHTCCCCEEEECSSSSHHHHHHHHHHHHSSSSCCSEEEES----------SHH
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEC----------CHH
T ss_conf 5699982445664045767999999998599843121222114555789999887417997537745----------779
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH------CCCCCCCHHHHHHHHHHHH
Q ss_conf 9999999999999743997056542558899999950------6565745699999999999
Q gi|254780346|r 86 IAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQAFDRV------SPSHLDRGGCAARSALAMI 141 (149)
Q Consensus 86 I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~QA~~R~------~~~~~nkG~eaa~Aal~mi 141 (149)
.+..+.+.+.+.. ..+|=-..|++.++...+..-. ..+...-|..|++.+++++
T Consensus 195 ~a~g~~~~l~~~g--~~vp~di~vig~d~~~~~~~~~p~lttv~~~~~~~g~~a~~~L~~~i 254 (285)
T 3c3k_A 195 LAAGAIQALTESG--LSIPQDVAVVGFDGVDISQITVPALTTVQQPSEQIGMKAVSLLLEQI 254 (285)
T ss_dssp HHHHHHHHHHHTT--CCTTTTCEEECSBCCGGGGTSSSCCBEEECCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC--CCCCCEEEEEECCCHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHH
T ss_conf 9999999999849--97784389982387289981589834999499999999999999997