HHsearch results for GI: 254780346 and protein with PDBid: 3egc_A
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcription, transcription regulation; 2.35A {Burkholderia thailandensis E264}
Probab=92.92 E-value=0.13 Score=29.80 Aligned_cols=98 Identities=11% Similarity=0.042 Sum_probs=36.2
Q ss_pred EEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEE-EEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHH
Q ss_conf 1799980312899999999999999987995555-530014422699999986331137853566541200066524678
Q gi|254780346|r 7 HVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSS-IVTPGVLEIPAAVSMVMNAKTRSVTYDGIIVLGVVMRGKTAHCDV 85 (149)
Q Consensus 7 kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~-i~VPGa~EiP~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~H~e~ 85 (149)
+|+++...-+..-.....+|+.+.+.+.|..... ...++.++...+.+..........++|+++|. .|.
T Consensus 127 ~i~~~~~~~~~~~~~~R~~gf~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~----------~D~ 196 (291)
T 3egc_A 127 RIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAGGVRADNGRDGAIKVLTGADRPTALLTS----------SHR 196 (291)
T ss_dssp SEEEECSCTTSHHHHHHHHHHHHHHHHTTCCCCGGGEEC------CCHHHHHHHHTC-CCCSEEEES----------SHH
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEECC----------CHH
T ss_conf 6988327743305889999999999984998432112367764557999999998559998510115----------789
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
Q ss_conf 9999999999999743997056542558899
Q gi|254780346|r 86 IAHAVTRGLVDLSINGSLPIGNGIVVVDSEQ 116 (149)
Q Consensus 86 I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~ 116 (149)
++-.+.+.+.+..+ .+|=-..|++.++.+
T Consensus 197 ~A~g~~~al~~~g~--~vP~di~vig~D~~~ 225 (291)
T 3egc_A 197 ITEGAMQALNVLGL--RYGPDVEIVSFDNLP 225 (291)
T ss_dssp HHHHHHHHHHHHTC--CBTTTBEEEEESCCG
T ss_pred HHHHHHHHHHHHCC--CCCCCCEEEEECCHH
T ss_conf 99879999998389--889986899967869