HHsearch results for GI: 254780346 and protein with PDBid: 3hcw_A
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=95.31 E-value=0.17 Score=28.98 Aligned_cols=100 Identities=14% Similarity=0.093 Sum_probs=42.6
Q ss_pred CEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHH-HHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHH
Q ss_conf 717999803128999999999999999879955555300144226-9999998633113785356654120006652467
Q gi|254780346|r 6 PHVLIIEARFYENLSAMLFEGCVNVLHSRAVQWSSIVTPGVLEIP-AAVSMVMNAKTRSVTYDGIIVLGVVMRGKTAHCD 84 (149)
Q Consensus 6 ~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~~~~i~VPGa~EiP-~a~~~~~~~~~~~~~~D~vIaLG~VIkGeT~H~e 84 (149)
.||++|..+-+......-.+|+.+.+++++.+++.+......+-- -+.+.+.........+||+++. .|
T Consensus 132 ~~i~~i~~~~~~~~~~~r~~gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aii~~----------~d 201 (295)
T 3hcw_A 132 DELIFITEKGNFEVSKDRIQGFETVASQFNLDYQIIETSNEREVILNYMQNLHTRLKDPNIKQAIISL----------DA 201 (295)
T ss_dssp SEEEEEEESSCCHHHHHHHHHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHHTCTTSCEEEEES----------SH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC----------CH
T ss_conf 75677548743157888889999999976999424432566035667777777764147776434557----------78
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH
Q ss_conf 899999999999997439970565425588999
Q gi|254780346|r 85 VIAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQ 117 (149)
Q Consensus 85 ~I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~Q 117 (149)
.++-.+.+.+.+.. ..+|=-..|++.++.+.
T Consensus 202 ~~a~g~~~~l~~~g--~~ip~dv~vvg~d~~~~ 232 (295)
T 3hcw_A 202 MLHLAILSVLYELN--IEIPKDVMTATFNDSYL 232 (295)
T ss_dssp HHHHHHHHHHHHTT--CCTTTTEEEEEECCSHH
T ss_pred HHHHHHHHHHHHCC--CCCCCCCCEEECCCHHH
T ss_conf 99999999999869--98894614441488689