HHSEARCH alignment of GI: 254780346 and SCOP domain: d1kz1a_

Alignment
>d1kz1a_ c.16.1.1 (A:) Lumazine synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=0  Score=316.67  Aligned_cols=137  Identities=26%  Similarity=0.403  Sum_probs=125.5

Q ss_pred             CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHH-CCCC---EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
Q ss_conf             966587179998031289999999999999998-7995---555530014422699999986331137853566541200
Q gi|254780346|r    1 MEVFIPHVLIIEARFYENLSAMLFEGCVNVLHS-RAVQ---WSSIVTPGVLEIPAAVSMVMNAKTRSVTYDGIIVLGVVM   76 (149)
Q Consensus         1 m~~~~~kI~IV~s~~~~~i~~~ll~ga~~~l~~-~~~~---~~~i~VPGa~EiP~a~~~~~~~~~~~~~~D~vIaLG~VI   76 (149)
                      |+-...||+||.|+||++|+++|++||.+.|.+ .++.   +++++|||+||||++++++++    +++|||+|+|||||
T Consensus         5 l~~~~~rI~IV~s~~n~~i~~~L~~ga~~~l~~~~~~~~~~i~v~~VPGa~EiP~~~~~~~~----~~~~D~iIalG~VI   80 (150)
T d1kz1a_           5 LKGPELRILIVHARGNLQAIEPLVKGAVETMIEKHDVKLENIDIESVPGSWELPQGIRASIA----RNTYDAVIGIGVLI   80 (150)
T ss_dssp             CCCTTCCEEEEECCTTHHHHHHHHHHHHHHHHHHHCCCGGGEEEEECSSGGGHHHHHHHHHH----HSCCSEEEEEEEEE
T ss_pred             CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHH----CCCCCEEEEEEEEE
T ss_conf             78889889999741878999999999999999856998434279995777778999999873----24656178887776


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCC-CCCHHHHHHHHHHHH
Q ss_conf             06652467899999999999997439970565425588999999506565-745699999999999
Q gi|254780346|r   77 RGKTAHCDVIAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQAFDRVSPSH-LDRGGCAARSALAMI  141 (149)
Q Consensus        77 kGeT~H~e~I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~QA~~R~~~~~-~nkG~eaa~Aal~mi  141 (149)
                      ||||+|||+||++|++|||++|+++++||+||||||+|++||++|++.+. .|||.|||+||++|.
T Consensus        81 kGeT~H~e~I~~~v~~gl~~lsl~~~~PI~~GILt~~n~~QA~~R~~~~~~~nkG~eaa~aal~ma  146 (150)
T d1kz1a_          81 KGSTMHFEYISEAVVHGLMRVGLDSGVPVILGLLTVLNEEQALYRAGLNGGHNHGNDWGSAAVEMG  146 (150)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEESSHHHHHHHBTCTTCCBHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf             376258789999999999998553896379997887999999998278677766899999999999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Lumazine synthase
superfamily: Lumazine synthase
family: Lumazine synthase
domain: Lumazine synthase
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]