HHSEARCH alignment of GI: 254780346 and SCOP domain: d1rvv1_

Alignment

Probab=100.00  E-value=0  Score=334.02  Aligned_cols=142  Identities=28%  Similarity=0.448  Sum_probs=134.5

Q ss_pred             CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCC---EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCC
Q ss_conf             65871799980312899999999999999987995---555530014422699999986331137853566541200066
Q gi|254780346|r    3 VFIPHVLIIEARFYENLSAMLFEGCVNVLHSRAVQ---WSSIVTPGVLEIPAAVSMVMNAKTRSVTYDGIIVLGVVMRGK   79 (149)
Q Consensus         3 ~~~~kI~IV~s~~~~~i~~~ll~ga~~~l~~~~~~---~~~i~VPGa~EiP~a~~~~~~~~~~~~~~D~vIaLG~VIkGe   79 (149)
                      -...||+||.|+||++|+++|++||.+.|.++|+.   +++++||||||+|++++++++    +++|||+||||||||||
T Consensus        10 ~~~~ki~IV~s~~n~~I~~~l~~ga~~~l~~~g~~~~~i~v~~VPGa~EiP~~~~~~~~----~~~~daiIalG~VIkGe   85 (154)
T d1rvv1_          10 GTGLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAE----TKKYDAIITLGTVIRGA   85 (154)
T ss_dssp             CTTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHH----TSCCSEEEEEEEEECCS
T ss_pred             CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEHHHHHHHHHC----CCCCCEEEEEEEEECCC
T ss_conf             89988999980176999999999999999985998667579997845318799998750----34656278888997178


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             524678999999999999974399705654255889999995065657456999999999999998636
Q gi|254780346|r   80 TAHCDVIAHAVTRGLVDLSINGSLPIGNGIVVVDSEQQAFDRVSPSHLDRGGCAARSALAMIELKKSLS  148 (149)
Q Consensus        80 T~H~e~I~~~v~~gl~~lsl~~~~PI~~gILt~~n~~QA~~R~~~~~~nkG~eaa~Aal~mi~l~~~l~  148 (149)
                      |+|||+||++|++|||++|+++++||+|||||++|++||++|++++.+|||.|||+||++|++|+|+|.
T Consensus        86 T~H~e~I~~~v~~gl~~lsl~~~~PV~~GILt~~n~~QA~~R~~~~~~nKG~eaA~aal~m~~l~r~l~  154 (154)
T d1rvv1_          86 TTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAGTKAGNKGVDCAVSAIEMANLNRSFE  154 (154)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHCSCEEEEEEEESSHHHHHHTEEETTEEHHHHHHHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             706778999999999999632798779862588988999998267654509999999999999986429

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Lumazine synthase
superfamily: Lumazine synthase
family: Lumazine synthase
domain: Lumazine synthase
species: Bacillus subtilis [TaxId: 1423]