HHsearch alignment for GI: 254780347 and conserved domain: COG0307
>COG0307 RibC Riboflavin synthase alpha chain [Coenzyme metabolism].
Probab=100.00 E-value=0 Score=494.66 Aligned_cols=195 Identities=45% Similarity=0.721 Sum_probs=184.1
Q ss_pred CCCEEEEEEEEEEEEEECCCCEEEEEEE-CCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf 9453371189999998769935999981-755112667724653331542365045556686799998656553201355
Q gi|254780347|r 1 MFTGIVTDIGKIIAMTPIAKGMRLRVMT-SYNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS 79 (204)
Q Consensus 1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~-~~~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~ 79 (204)
T Consensus 1 MFTGIIe~iG~V~~~~---~~~~~~i~~~~~~~~d~~lGdSIAvnGvCLTVt~~~~-----~~f~~dv~~ETl~~TnL~~ 72 (204)
T COG0307 1 MFTGIVEEIGKVKKVE---NGITLTIESAKLILEDVKLGDSIAVNGVCLTVTEFNE-----DGFSVDVMPETLRRTNLGD 72 (204)
T ss_pred CCCEEEEEEEEEEECC---CCEEEEEEECCCCCCCCCCCCEEEECCEEEEEEEECC-----CCEEEEECHHHHHHCCHHH
T ss_conf 9653310369998504---8569999504545566756774788989899999889-----9699995389964330101
Q ss_pred CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEE-CCCCCCCEECCCCEEEEEEEEEEEEEECCC
Q ss_conf 5656631335432000004764245401001101110023313798751-342112100235719982345787741685
Q gi|254780347|r 80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLS-LPHNLEQFIAVKGSVCLNGVSLTVNLVGKN 158 (204)
Q Consensus 80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~-~~~~~~~~l~~KgsI~idGvSLTV~~~~~~ 158 (204)
T Consensus 73 ~~~G~~VNLERAl~~~~r~GGH~VsGHVDg~g~I~~i~~~~na~~~~~~~~~~~l~kyiv~KGsIavDGiSLTV~~v~~~ 152 (204)
T COG0307 73 LKVGDKVNLERALKLGDRLGGHLVSGHVDGTGEIVKIEKDGNAVRFWFKAPPEELAKYIVEKGSIAVDGISLTVNEVEDD 152 (204)
T ss_pred CCCCCEEEEEHHCCCCCCCCCEEEEEEEEEEEEEEEEEECCCEEEEEEECCCHHHHHHHCCCCEEEEEEEEEEEEEECCC
T ss_conf 66688885104133798353178876770089999998748709999975998998552046449983189999977287
Q ss_pred EEEEEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHHHHHHHCCCCC
Q ss_conf 499998444330133002489967469713588999998602335
Q gi|254780347|r 159 FFDVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARLYALNTS 203 (204)
Q Consensus 159 ~f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~kyv~r~~~~~~~ 203 (204)
T Consensus 153 ~F~V~lIPhT~~~T~l~~~~~Gd~VNiE~D~l~kyver~l~~~~~ 197 (204)
T COG0307 153 TFSVSLIPHTLERTTLGEKKVGDRVNIEIDVLAKYVERLLAAGKA 197 (204)
T ss_pred EEEEEEEECCHHHCCHHHCCCCCEEEEEECHHHHHHHHHHHHCCC
T ss_conf 899999736043300300668998899681799999999863213