HHsearch alignment for GI: 254780347 and conserved domain: PRK09289
>PRK09289 riboflavin synthase subunit alpha; Provisional.
Probab=100.00 E-value=0 Score=514.31 Aligned_cols=198 Identities=44% Similarity=0.696 Sum_probs=191.9
Q ss_pred CCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCCC
Q ss_conf 94533711899999987699359999817551126677246533315423650455566867999986565532013555
Q gi|254780347|r 1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYNTSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIASW 80 (204)
Q Consensus 1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~l 80 (204)
T Consensus 1 MFTGIIe~~G~i~~i~~~~~~~~l~I~~~~~~~~~~iG~SIavnGvCLTV~~~~-----~~~~~fdv~~ETl~~T~l~~l 75 (198)
T PRK09289 1 MFTGIVEEVGTVVSIEEKGGGRRLTIEAPKLLSDLKLGDSIAVNGVCLTVTEID-----GDGFTVDVSPETLRRTNLGDL 75 (198)
T ss_pred CCCEECCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEECCEEEEEEECC-----CCEEEEEEEHHHHHHCCCCCC
T ss_conf 988543548999999976997899998086435676788799888998889868-----988999989788333137777
Q ss_pred CCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCEE
Q ss_conf 65663133543200000476424540100110111002331379875134211210023571998234578774168549
Q gi|254780347|r 81 GIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNFF 160 (204)
Q Consensus 81 ~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~f 160 (204)
T Consensus 76 ~~G~~VNLErsl~~gd~lgGH~VsGHVD~~~~i~~i~~~~~~~~~~i~~p~~~~~yiv~KGsIaidGvSLTV~~v~-~~F 154 (198)
T PRK09289 76 KVGDRVNLERALRLGDRLGGHIVSGHVDGTGEIVSIEKSGNSVEFRIKAPAELAKYIVEKGSIAVDGVSLTVNEVD-GEF 154 (198)
T ss_pred CCCCEEEECCCCCCCCEECCCEEEEEECEEEEEEEEEECCCCEEEEEECCHHHHCCCCCCCEEEEEEEEEEEEEEC-CEE
T ss_conf 7796671055755886206713238713489999999848829999992979963777776699961699978437-889
Q ss_pred EEEEEHHHHCCCCHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCC
Q ss_conf 99984443301330024899674697135889999986023359
Q gi|254780347|r 161 DVLLIRHTIEETTWKMHKVGDLINIEVDSMMRYIARLYALNTSQ 204 (204)
Q Consensus 161 ~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D~l~kyv~r~~~~~~~~ 204 (204)
T Consensus 155 ~v~lIP~Tl~~T~l~~~~~Gd~VNiE~D~lakyv~r~l~~~~~~ 198 (198)
T PRK09289 155 SVNLIPHTLEVTTLGELKVGDRVNLEIDLLAKYVERLLAARKNA 198 (198)
T ss_pred EEEEEHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCC
T ss_conf 99995455654724448689988995862999999986443079