HHsearch alignment for GI: 254780347 and conserved domain: PRK13020

>PRK13020 riboflavin synthase subunit alpha; Provisional.
Probab=100.00  E-value=0  Score=505.18  Aligned_cols=197  Identities=34%  Similarity=0.559  Sum_probs=190.4

Q ss_pred             CCCEEEEEEEEEEEEEECCCCEEEEEEECCC-CCCCCCCCEEEECCEEEEEEEECCCCCCCCEEEEEEEHHHHHHCCCCC
Q ss_conf             9453371189999998769935999981755-112667724653331542365045556686799998656553201355
Q gi|254780347|r    1 MFTGIVTDIGKIIAMTPIAKGMRLRVMTSYN-TSKMKLGCSIAHAGICLTVVRLSEEHSVDNWYEVEVWAETNRITNIAS   79 (204)
Q Consensus         1 MFtGIV~~~G~V~~i~~~~~~~~l~i~~~~~-~~~l~~G~SIavnGvCLTV~~i~~~~~~~~~f~~~~~~ETl~~T~l~~   79 (204)
T Consensus         1 MFTGIIe~~G~I~~i~~~~~~~~l~I~~~~~~~~~l~iGdSIavnGvCLTV~~~~-----~~~~~fdv~~ETl~~T~l~~   75 (207)
T PRK13020          1 MFTGIVQAVAEVVAIHKKDGLNTLEIAFPPDLLEGLEIGASVAVNGVCLTVTKIE-----GDRVFFDVMEETLRLTNLAN   75 (207)
T ss_pred             CCCEECCEEEEEEEEEECCCCEEEEEECCCHHHCCCCCCCEEEECCEEEEEEECC-----CCEEEEEEEHHHHHHCCHHH
T ss_conf             9885516389999999769968999986822413577898799888898889748-----98599998789631252313


Q ss_pred             CCCCCCCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCE
Q ss_conf             56566313354320000047642454010011011100233137987513421121002357199823457877416854
Q gi|254780347|r   80 WGIGTFINLERSVKLGDRLDGHLVSGHIDGTVEILFLDFIGDSMYCRLSLPHNLEQFIAVKGSVCLNGVSLTVNLVGKNF  159 (204)
Q Consensus        80 l~~G~~VNLE~a~~~g~~lgGH~v~GhVd~~~~i~~i~~~~~~~~~~i~~~~~~~~~l~~KgsI~idGvSLTV~~~~~~~  159 (204)
T Consensus        76 ~~~G~~VNLEral~~gdrlgGH~V~GHVD~~~~i~~i~~~~~~~~~~i~~p~~~~~~iv~KGSIaidGVSLTV~~v~~~~  155 (207)
T PRK13020         76 LRVGDRVNIERSAKFGAEIGGHILSGHVDTTAEVVEISETEENYDIRFRVPPEWMKYIFAKGFIGVNGCSLTVGDVEEGW  155 (207)
T ss_pred             CCCCCEEEECCCCCCCCEECCCEEEEECCEEEEEEEEEECCCCEEEEEECCHHHHCCCCCCCEEEEEEEEEEEEEECCCE
T ss_conf             23598760044756876517816789800599999999848938999955979953667687799924899998773998


Q ss_pred             EEEEEEHHHHCCCCHHHCCCCCEEEEEHH----HHHHHHHHHHCCCC
Q ss_conf             99998444330133002489967469713----58899999860233
Q gi|254780347|r  160 FDVLLIRHTIEETTWKMHKVGDLINIEVD----SMMRYIARLYALNT  202 (204)
Q Consensus       160 f~v~lIp~Tl~~T~l~~~k~Gd~VNiE~D----~l~kyv~r~~~~~~  202 (204)
T Consensus       156 f~V~lIPhTl~~T~l~~~k~Gd~VNiE~D~~~~~i~k~ver~l~~~~  202 (207)
T PRK13020        156 FEVHLIPETLRATNLGAKKVGDKVNIEIDSQTQVIVDTVERVLAARL  202 (207)
T ss_pred             EEEEEEEHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             99999511354384434868998998385883489999999987543