HHsearch alignment for GI: 254780348 and conserved domain: pfam00383
>pfam00383 dCMP_cyt_deam_1 Cytidine and deoxycytidylate deaminase zinc-binding region.
Probab=99.88 E-value=1.7e-22 Score=172.14 Aligned_cols=93 Identities=43% Similarity=0.633 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE-CCEEEEEEECCC-CC---CCHHHHHHHHHHC-----CHHCCCEEEE
Q ss_conf 789999999999998708821888964799986-998999984388-76---9848999999730-----0106988999
Q gi|254780348|r 5 SFDARFMSAALRFSRWHVGLTSTNPSVACLIVK-DGIVIGRGVTAY-GG---CPHAEVQALEEAG-----EEARGATAYV 74 (364)
Q Consensus 5 ~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~-~g~ii~~g~~~~-~G---~~HAE~~al~~~~-----~~~~~atlyv 74 (364)
T Consensus 2 ~~de~~m~~A~~~A~~a~-~~~~~~~VGaviv~~~g~ii~~g~N~~~~~~~~~~HAE~~Ai~~a~~~~~~~~~~~~~lyv 80 (104)
T pfam00383 2 EWDEYFMRLALEAAKRAY-TPYSNFPVGAVIVKNDGGIIATGYNGENAGYDPTIHAERNAIRNAGRLGEGIKLEGATLYV 80 (104)
T ss_pred CHHHHHHHHHHHHHHHCC-CCCCCCCEEEEEECCCCCEEEEEECEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEC
T ss_conf 789999999999998667-9889997899999279979998857075699963018999999999966997112632326
Q ss_pred ECCCCCCCCCCCHHHHHHHHCCCCEEEEEC
Q ss_conf 057321157521055565301343246630
Q gi|254780348|r 75 TLEPCSHYGRSPPCAQFIIECGIRRVVVCV 104 (364)
Q Consensus 75 tLEPC~h~GktppC~~~ii~~gIk~Vvi~~ 104 (364)
T Consensus 81 T~ePC~m------C~~ai~~~gi~~Vvyg~ 104 (104)
T pfam00383 81 TLEPCGM------CRQAIIESGIKKVVFGT 104 (104)
T ss_pred CCCCHHH------HHHHHHHHCCCEEEECC
T ss_conf 9897699------99999996919999809