>pfam01872 RibD_C RibD C-terminal domain. The function of this domain is not known, but it is thought to be involved in riboflavin biosynthesis. This domain is found in the C terminus of RibD/RibG, in combination with pfam00383, as well as in isolation in some archaebacterial proteins. This family appears to be related to pfam00186.

Probab=100.00 E-value=2.1e-43 Score=313.28 Aligned_cols=194 Identities=38% Similarity=0.543 Sum_probs=166.2 Q ss_pred CHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCC--CCCCEEEEECCC Q ss_conf 220110102787720211365322221013566676420144036631220134542354434444--344215764466 Q gi|254780348|r 150 SHITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQ--EHSPMRIILDPH 227 (364) Q Consensus 150 P~V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~--~~~P~riVld~~ 227 (364) T Consensus 1 P~V~l~~A~SlDG~Ia~~~g~~~wis~~~~~~~~~~lR~~~daIlvG~~T~~~d~p~l~~r~~~~~~~~~~p~~vVl~~~ 80 (196) T pfam01872 1 PYVILKFAISLDGKIAAAGGSSQWITGEEARADVHQLRAEADAILVGRGTVRADNPSLTVRWVKGRAAERQPPRVVVDST 80 (196) T ss_pred CEEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEECHHHHHHHCCCCCEECCCCCCCCCCCEEEEECCC T ss_conf 98999999969888599999867138977989999998618959974565211075651650476631369829998378 Q ss_pred CCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCC Q ss_conf 89980221003444670798546554210110022322222333222788999986079969998123899999997889 Q gi|254780348|r 228 FKLSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRL 307 (364) Q Consensus 228 l~i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~L 307 (364) T Consensus 81 l~~~~~~~~~~~~-~-~~~i~~~~~~~~~-------~~~~~~~~~~~~~~~l~~L~~~g~~~ilveGG~~l~~~fl~~~L 151 (196) T pfam01872 81 LRVPLDARVLNDD-A-PTLVATTEPADKE-------KVEKLKVLRVDLKELLRELKERGIRSLLVEGGATLAGSLLRAGL 151 (196) T ss_pred CCCCCHHHHHCCC-C-CEEEEECCCCCHH-------HCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCC T ss_conf 8889212442589-9-8899983763254-------32122345789999999998679987999857999999976884 Q ss_pred CCEEEEEEECEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCEEE Q ss_conf 889999960743268875233345454446405446886793699 Q gi|254780348|r 308 VDSIILYRSQIVIGEGGIPSPLEEGYLEKNFMCVRRDYFGSDVCL 352 (364) Q Consensus 308 vDEl~ifiaP~ilG~~g~~s~~~~~~~~~~~~l~~~~~ig~Dv~~ 352 (364) T Consensus 152 iDE~~l~i~P~ilG~~g~~~f~~~~~~~~~l~l~~~~~~~~~~v~ 196 (196) T pfam01872 152 VDELRLYIAPKLLGGGGRTLFGGEGFLALKLKLVSSEAIGNGVVL 196 (196) T ss_pred CCEEEEEECCEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCEEC T ss_conf 889899983667889997777889976767689889992991289

HHsearch alignment for GI: 254780348 and conserved domain: pfam01872