HHsearch results for GI: 254780348 and protein with PDBid: 1kmv_A
>1kmv_A DHFR, dihydrofolate reductase; oxidoreductase, antiparasitic drugs, lipophilic antifolates; HET: LII NDP; 1.05A {Homo sapiens} SCOP: c.71.1.1 PDB: 1dhf_A* 1hfr_A* 1drf_A* 1kms_A* 1ohj_A* 1ohk_A* 1pd8_A* 1pd9_A* 1pdb_A 1s3u_A* 1s3v_A* 1s3w_A* 1u72_A* 1yho_A* 2c2s_A* 2c2t_A* 2dhf_A* 3ghw_A* 3fs6_A* 1mvs_A* ...
Probab=98.25 E-value=1.1e-05 Score=57.15 Aligned_cols=128 Identities=16% Similarity=0.125 Sum_probs=81.7
Q ss_pred HHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH------CCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEE--EEEC
Q ss_conf 10102787720211365322221013566676420------144036631220134542354434444344215--7644
Q gi|254780348|r 154 LKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRA------QSDAILVGIGTVLADDPELTCRLNGLQEHSPMR--IILD 225 (364)
Q Consensus 154 lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa------~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~r--iVld 225 (364)
+=+|++.||-|.. +|+--|...++..++...+-. ..++|++|.+|... ++.....-|-| ||++
T Consensus 6 ~I~A~~~n~~IG~-~g~lPW~~~~~Dl~~Fk~~T~~~~~~~~~~~vIMGrkT~es--------~p~~~rpLp~R~niVlS 76 (186)
T 1kmv_A 6 CIVAVSQNMGIGK-NGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFS--------IPEKNRPLKGRINLVLS 76 (186)
T ss_dssp EEEEECTTCEEEB-TTBCSSCCCHHHHHHHHHHHHCCSSTTCEEEEEEEHHHHHH--------SCGGGCSCTTSEEEEEC
T ss_pred EEEEECCCCCCCC-CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHH--------CCCCCCCCCCCEEEEEE
T ss_conf 9999889996737-99187988989999999986799877774189994673431--------76567626996699983
Q ss_pred CCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHH----CCCCEEEECCHHHHHHH
Q ss_conf 66899802210034446707985465542101100223222223332227889999860----79969998123899999
Q gi|254780348|r 226 PHFKLSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVG----RGVTSLLVEGGAAVAHS 301 (364)
Q Consensus 226 ~~l~i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~----~gi~~iLVEGG~~l~~s 301 (364)
++...+.+. ...+ ..+++++++.+.. .....|+|-||+.+..+
T Consensus 77 r~~~~~~~~------------------------------~~~v---~~s~~~~~~~~~~~~~~~~~~~ifIIGG~~IY~~ 123 (186)
T 1kmv_A 77 RELKEPPQG------------------------------AHFL---SRSLDDALKLTEQPELANKVDMVWIVGGSSVYKE 123 (186)
T ss_dssp SSCSSCCTT------------------------------CSEE---ESSHHHHHHHHTSTTTTTTEEEEEECCCHHHHHH
T ss_pred CCCCCCCCC------------------------------CEEE---CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH
T ss_conf 254445687------------------------------6686---1889999998654765067766999750999999
Q ss_pred HHHCCCCCEEEEEEECEEECCC
Q ss_conf 9978898899999607432688
Q gi|254780348|r 302 FINSRLVDSIILYRSQIVIGEG 323 (364)
Q Consensus 302 fl~~~LvDEl~ifiaP~ilG~~ 323 (364)
||+..++||+|++.-..-..++
T Consensus 124 ~l~~~~~d~i~lT~I~~~~~~D 145 (186)
T 1kmv_A 124 AMNHPGHLKLFVTRIMQDFESD 145 (186)
T ss_dssp HHTSCSCEEEEEEEESSCCCCS
T ss_pred HHHCCCCCEEEEEEECCCCCCC
T ss_conf 9737554479999972244788