HHsearch results for GI: 254780348 and protein with PDBid: 1vq2_A

>1vq2_A DCMP deaminase, deoxycytidylate deaminase; hydrolase; HET: DDN; 2.20A {Enterobacteria phage T4} SCOP: c.97.1.2
Probab=99.94  E-value=3e-27  Score=202.76  Aligned_cols=128  Identities=26%  Similarity=0.318  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCC------------------------------------
Q ss_conf             99999999999987088218889647999869989999843887------------------------------------
Q gi|254780348|r    7 DARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYG------------------------------------   50 (364)
Q Consensus         7 d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~~------------------------------------   50 (364)
                      ++.||+.|...|++.   +-|+..||||||+||+|||+||+..+                                    
T Consensus         3 ~~~~M~~A~~~a~rS---~c~~~~VGAVIV~~~~IIs~G~Ng~P~G~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (193)
T 1vq2_A            3 ASTVLQIAYLVSQES---KCCSWKVGAVIEKNGRIISTGYNGSPAGGVNCCDYAAEQGWLLNKPKHAIIQGHKPECVSFG   79 (193)
T ss_dssp             HHHHHHHHHHHHTTC---CCSSBCCEEEEEETTEEEEEEECBCCTTSCCHHHHHHHHTCEEEC-----------------
T ss_pred             HHHHHHHHHHHHHHC---CCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCC
T ss_conf             899999999999758---99999878999989989998748997688764533101211103211122210110000112


Q ss_pred             ---------------------CCCHHHHHHHHHHC---CHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCC
Q ss_conf             ---------------------69848999999730---010698899905732115752105556530134324663010
Q gi|254780348|r   51 ---------------------GCPHAEVQALEEAG---EEARGATAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDD  106 (364)
Q Consensus        51 ---------------------G~~HAE~~al~~~~---~~~~~atlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~D  106 (364)
                                           ...|||++||.++.   ....|+|||||+|||.+      |+.+|+++||+||||+..|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~iHAE~~ai~~~~~~~~~~~~~~lyvt~~PC~~------Ca~~i~~~gI~~V~~~~~~  153 (193)
T 1vq2_A           80 STDRFVLAKEHRSAHSEWSSKNEIHAELNAILFAAENGSSIEGATMYVTLSPCPD------CAKAIAQSGIKKLVYCETY  153 (193)
T ss_dssp             ---CEEECGGGHHHHHHHHHHHCBCHHHHHHHHHHHHTCCCTTCEEEEEECCCHH------HHHHHHHHTCCEEEEEECC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCHHH------HHHHHHHHCCCEEEEEECC
T ss_conf             1100000002332100136788769899999999883788877436647896599------9999999798989996289


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHC
Q ss_conf             121101243311001898896222101232001222201
Q gi|254780348|r  107 PDVRVSGRGLQWLSQKGIIVDRMMESEGKIFLHAYLTRQ  145 (364)
Q Consensus       107 Pnp~v~gkGi~~L~~~GI~V~~~~~~~~~~ln~~f~~~~  145 (364)
                      |+.  .+.|.++|+++||+|..+.++++..||..+|...
T Consensus       154 ~~~--~~~~~~~l~~~gI~v~~i~~~~~~~l~~~~~~~~  190 (193)
T 1vq2_A          154 DKN--KPGWDDILRNAGIEVFNVPKKNLNKLNWENINEF  190 (193)
T ss_dssp             TTC--CTTTTHHHHHTTCEEEECCGGGCCSSCGGGCCCB
T ss_pred             CCC--CHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf             995--3799999998799799519999999999999998