HHsearch results for GI: 254780348 and protein with PDBid: 1vq2_A
>1vq2_A DCMP deaminase, deoxycytidylate deaminase; hydrolase; HET: DDN; 2.20A {Enterobacteria phage T4} SCOP: c.97.1.2
Probab=99.94 E-value=3e-27 Score=202.76 Aligned_cols=128 Identities=26% Similarity=0.318 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCC------------------------------------
Q ss_conf 99999999999987088218889647999869989999843887------------------------------------
Q gi|254780348|r 7 DARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYG------------------------------------ 50 (364)
Q Consensus 7 d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~~------------------------------------ 50 (364)
++.||+.|...|++. +-|+..||||||+||+|||+||+..+
T Consensus 3 ~~~~M~~A~~~a~rS---~c~~~~VGAVIV~~~~IIs~G~Ng~P~G~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (193)
T 1vq2_A 3 ASTVLQIAYLVSQES---KCCSWKVGAVIEKNGRIISTGYNGSPAGGVNCCDYAAEQGWLLNKPKHAIIQGHKPECVSFG 79 (193)
T ss_dssp HHHHHHHHHHHHTTC---CCSSBCCEEEEEETTEEEEEEECBCCTTSCCHHHHHHHHTCEEEC-----------------
T ss_pred HHHHHHHHHHHHHHC---CCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCC
T ss_conf 899999999999758---99999878999989989998748997688764533101211103211122210110000112
Q ss_pred ---------------------CCCHHHHHHHHHHC---CHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCC
Q ss_conf ---------------------69848999999730---010698899905732115752105556530134324663010
Q gi|254780348|r 51 ---------------------GCPHAEVQALEEAG---EEARGATAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDD 106 (364)
Q Consensus 51 ---------------------G~~HAE~~al~~~~---~~~~~atlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~D 106 (364)
...|||++||.++. ....|+|||||+|||.+ |+.+|+++||+||||+..|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~iHAE~~ai~~~~~~~~~~~~~~lyvt~~PC~~------Ca~~i~~~gI~~V~~~~~~ 153 (193)
T 1vq2_A 80 STDRFVLAKEHRSAHSEWSSKNEIHAELNAILFAAENGSSIEGATMYVTLSPCPD------CAKAIAQSGIKKLVYCETY 153 (193)
T ss_dssp ---CEEECGGGHHHHHHHHHHHCBCHHHHHHHHHHHHTCCCTTCEEEEEECCCHH------HHHHHHHHTCCEEEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCHHH------HHHHHHHHCCCEEEEEECC
T ss_conf 1100000002332100136788769899999999883788877436647896599------9999999798989996289
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHC
Q ss_conf 121101243311001898896222101232001222201
Q gi|254780348|r 107 PDVRVSGRGLQWLSQKGIIVDRMMESEGKIFLHAYLTRQ 145 (364)
Q Consensus 107 Pnp~v~gkGi~~L~~~GI~V~~~~~~~~~~ln~~f~~~~ 145 (364)
|+. .+.|.++|+++||+|..+.++++..||..+|...
T Consensus 154 ~~~--~~~~~~~l~~~gI~v~~i~~~~~~~l~~~~~~~~ 190 (193)
T 1vq2_A 154 DKN--KPGWDDILRNAGIEVFNVPKKNLNKLNWENINEF 190 (193)
T ss_dssp TTC--CTTTTHHHHHTTCEEEECCGGGCCSSCGGGCCCB
T ss_pred CCC--CHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 995--3799999998799799519999999999999998