HHsearch results for GI: 254780348 and protein with PDBid: 2g84_A

>2g84_A Cytidine and deoxycytidylate deaminase zinc- binding region; structural genomics, PSI, protein structure initiative; 1.40A {Nitrosomonas europaea atcc 19718} SCOP: c.97.1.2
Probab=99.93  E-value=1.7e-25  Score=190.92  Aligned_cols=133  Identities=23%  Similarity=0.325  Sum_probs=109.4

Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE--CCEEEEEEECCCC----CCCHHHHHHHHHHCCH----------H
Q ss_conf             7789999999999998708821888964799986--9989999843887----6984899999973001----------0
Q gi|254780348|r    4 SSFDARFMSAALRFSRWHVGLTSTNPSVACLIVK--DGIVIGRGVTAYG----GCPHAEVQALEEAGEE----------A   67 (364)
Q Consensus         4 ~~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~--~g~ii~~g~~~~~----G~~HAE~~al~~~~~~----------~   67 (364)
                      .+.|+.||++||++|+++...  .+.+||||||+  +|+||++|+.+..    ...|||++||++|.++          .
T Consensus        25 ~~~~e~~M~~aielAr~~~~~--g~~P~GavIv~~d~g~Iia~g~N~~~~~~dpt~HAEi~Ai~~a~~~~~~~~l~~~~~  102 (197)
T 2g84_A           25 LAAPEARMGYVLELVRANIAA--DGGPFAAAVFERDSGLLIAAGTNRVVPGRCSAAHAEILALSLAQAKLDTHDLSADGL  102 (197)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHT--TCCSCEEEEEETTTCBEEEEEECCTTTTTCTTCCHHHHHHHHHHHHHTCSCTTCTTS
T ss_pred             CCCHHHHHHHHHHHHHHHHHC--CCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             788599999999999999876--999789999988999899987177778899663799999999999847654466455


Q ss_pred             CCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCC--------CCCCCCCCCCEEE-ECCCCHHHHHH
Q ss_conf             69889990573211575210555653013432466301012110124--------3311001898896-22210123200
Q gi|254780348|r   68 RGATAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGR--------GLQWLSQKGIIVD-RMMESEGKIFL  138 (364)
Q Consensus        68 ~~atlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gk--------Gi~~L~~~GI~V~-~~~~~~~~~ln  138 (364)
                      .++|||+|||||      |.|+.+|+++||+|||||..||+....|.        ....+.+.+|+|. +++++||..+.
T Consensus       103 ~~~tlYtT~EPC------~MC~~Ai~~agI~rVvyg~~~~d~~~~G~~~~~~~~~~~~~~~~~~i~v~ggvl~dE~~~Ll  176 (197)
T 2g84_A          103 PACELVTSAEPC------VMCFGAVIWSGVRSLVCAARSDDVEAIGFDEGPRPENWMGGLEARGITVTTGLLRDAACALL  176 (197)
T ss_dssp             CCEEEEEEECCC------HHHHHHHHHHCCSEEEEEECHHHHHHTTCCCCCCCTTHHHHHHHTTCEEECCTTHHHHHHHH
T ss_pred             CCCEEEEECCCC------HHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHH
T ss_conf             585799634778------88999999862798999960898654576532027777668765999898688899999999


Q ss_pred             HHHHHH
Q ss_conf             122220
Q gi|254780348|r  139 HAYLTR  144 (364)
Q Consensus       139 ~~f~~~  144 (364)
                      +.|+..
T Consensus       177 k~f~~~  182 (197)
T 2g84_A          177 REYNAC  182 (197)
T ss_dssp             HHHHHH
T ss_pred             HHHHHC
T ss_conf             999976