HHsearch results for GI: 254780348 and protein with PDBid: 2nx8_A
>2nx8_A TRNA-specific adenosine deaminase; TAD, hydrolase; 2.00A {Streptococcus pyogenes serotype M6}
Probab=100.00 E-value=2.1e-37 Score=271.27 Aligned_cols=155 Identities=27% Similarity=0.400 Sum_probs=140.9
Q ss_pred CCCC-HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCC----CCCHHHHHHHHHHCC-----HHCCC
Q ss_conf 9687-7899999999999987088218889647999869989999843887----698489999997300-----10698
Q gi|254780348|r 1 MPVS-SFDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYG----GCPHAEVQALEEAGE-----EARGA 70 (364)
Q Consensus 1 m~~~-~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~~----G~~HAE~~al~~~~~-----~~~~a 70 (364)
|++| +.|++||++|+++|+++ .+.+||+||||||+||+|||+|||... +..|||++|+++|.. .+.|+
T Consensus 9 m~~~~~~d~~fM~~Al~~A~~a--~~~g~~PVGaVIV~~g~IIa~g~N~~~~~~~~~~HAe~~ai~~a~~~~~~~~l~~~ 86 (179)
T 2nx8_A 9 MPYSLEEQTYFMQEALKESEKS--LQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEGNWRLLDT 86 (179)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHH--HHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTE
T ss_pred CCCCHHHHHHHHHHHHHHHHHH--HHCCCCCEEEEEEECCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 5678178999999999999986--03699988999998999999861513058997232999889999986088737676
Q ss_pred EEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC----CCEEE-ECCCCHHHHHHHHHHHHC
Q ss_conf 8999057321157521055565301343246630101211012433110018----98896-222101232001222201
Q gi|254780348|r 71 TAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQK----GIIVD-RMMESEGKIFLHAYLTRQ 145 (364)
Q Consensus 71 tlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~----GI~V~-~~~~~~~~~ln~~f~~~~ 145 (364)
|+||||||| |.|+.+|+.+||+|||+|..||++.+.|.+..+|++. +++|. |++++||..|++.||.+.
T Consensus 87 ~lyvTlEPC------~mC~~ai~~a~I~rVvy~~~d~~~g~~g~~~~~~~~~~~~~~~eV~~Gvl~~e~~~Llk~Ff~~~ 160 (179)
T 2nx8_A 87 TLFVTIEPC------VMCSGAIGLARIPHVIYGASNQKFGGVDSLYQILTDERLNHRVQVERGLLAADCANIMQTFFRQG 160 (179)
T ss_dssp EEEEEECCB------HHHHHHHHHTTCCEEEEEECCTTTBTTTTSCCGGGCTTTTCCCEEEECTTHHHHHHHHHHHHHHH
T ss_pred EEECCCCCC------HHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHH
T ss_conf 244576866------79999999828684999537998774563888754131289978991868999999999999999
Q ss_pred CCCCCHHHHHHCCCHHHH
Q ss_conf 134222011010278772
Q gi|254780348|r 146 VEKRSHITLKIAVSQDNM 163 (364)
Q Consensus 146 ~~~rP~V~lK~A~SlDGk 163 (364)
..++|+++.|+|+|.|++
T Consensus 161 r~k~~~~~~~~~~~~d~~ 178 (179)
T 2nx8_A 161 RERKKIAKHLIKEQSDPF 178 (179)
T ss_dssp HHHHHHHHHHHHC-----
T ss_pred HHCCCCHHHHHHHHCCCC
T ss_conf 860970025688746999