HHsearch results for GI: 254780348 and protein with PDBid: 3dh1_A
>3dh1_A TRNA-specific adenosine deaminase 2; zinc-binding protein, translation, tRNA processing, hydrolase, structural genomics; 2.80A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=219.20 Aligned_cols=143 Identities=22% Similarity=0.303 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECC----CCCCCHHHHHHHHHHC-----------CHHCC
Q ss_conf 78999999999999870882188896479998699899998438----8769848999999730-----------01069
Q gi|254780348|r 5 SFDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTA----YGGCPHAEVQALEEAG-----------EEARG 69 (364)
Q Consensus 5 ~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~----~~G~~HAE~~al~~~~-----------~~~~~ 69 (364)
++|++||+.||++|+++... .+.+||||||+||+||++||.. ..+..|||++||+.+. ..+.|
T Consensus 24 ~~de~~M~~Al~lA~~a~~~--g~~PvGaViV~~g~IIa~g~N~~~~~~d~t~HaEi~ai~~a~~~~~~~~~~~~~~l~~ 101 (189)
T 3dh1_A 24 EETEKWMEEAMHMAKEALEN--TEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEH 101 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHT--TSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHHHHCCCHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHC--CCCCEEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 78999999999999987416--9998899999899899986144555788776489999999999998741125432578
Q ss_pred CEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC------CCCEEE-ECCCCHHHHHHHHHH
Q ss_conf 8899905732115752105556530134324663010121101243311001------898896-222101232001222
Q gi|254780348|r 70 ATAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQ------KGIIVD-RMMESEGKIFLHAYL 142 (364)
Q Consensus 70 atlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~------~GI~V~-~~~~~~~~~ln~~f~ 142 (364)
+||||||||| |.|+.+|+++||+|||||+.||+....|..+..... .+++|. |++++||..|++.||
T Consensus 102 ~tlYtT~EPC------~mCa~ai~~agI~rVvyg~~d~~~g~~g~~~~l~~~~~~~~~~~~~v~~gvl~ee~~~llk~Ff 175 (189)
T 3dh1_A 102 TVLYVTVEPC------IMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCIPGYRAEEAVEMLKTFY 175 (189)
T ss_dssp EEEEEEECCB------HHHHHHHHHHTCCEEEEEECCTTTBTBTTSCBCTTCCCTTSSCCCEEECCTTHHHHHHHHHHHT
T ss_pred CEEEECCCCH------HHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHH
T ss_conf 5468524881------9999999995998799997189988756247877654111389908986958999999999999
Q ss_pred HHCCCCCCHHHHH
Q ss_conf 2011342220110
Q gi|254780348|r 143 TRQVEKRSHITLK 155 (364)
Q Consensus 143 ~~~~~~rP~V~lK 155 (364)
.....++|..-.|
T Consensus 176 ~~~r~~~p~~k~k 188 (189)
T 3dh1_A 176 KQENPNAPKSKVR 188 (189)
T ss_dssp CC-----------
T ss_pred HHHCCCCCCCCCC
T ss_conf 9866799977768