HHsearch results for GI: 254780348 and protein with PDBid: 3dh1_A

>3dh1_A TRNA-specific adenosine deaminase 2; zinc-binding protein, translation, tRNA processing, hydrolase, structural genomics; 2.80A {Homo sapiens}
Probab=99.96  E-value=1.1e-29  Score=219.20  Aligned_cols=143  Identities=22%  Similarity=0.303  Sum_probs=121.8

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECC----CCCCCHHHHHHHHHHC-----------CHHCC
Q ss_conf             78999999999999870882188896479998699899998438----8769848999999730-----------01069
Q gi|254780348|r    5 SFDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTA----YGGCPHAEVQALEEAG-----------EEARG   69 (364)
Q Consensus         5 ~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~----~~G~~HAE~~al~~~~-----------~~~~~   69 (364)
                      ++|++||+.||++|+++...  .+.+||||||+||+||++||..    ..+..|||++||+.+.           ..+.|
T Consensus        24 ~~de~~M~~Al~lA~~a~~~--g~~PvGaViV~~g~IIa~g~N~~~~~~d~t~HaEi~ai~~a~~~~~~~~~~~~~~l~~  101 (189)
T 3dh1_A           24 EETEKWMEEAMHMAKEALEN--TEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEH  101 (189)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT--TSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHHHHCCCHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHC--CCCCEEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             78999999999999987416--9998899999899899986144555788776489999999999998741125432578


Q ss_pred             CEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC------CCCEEE-ECCCCHHHHHHHHHH
Q ss_conf             8899905732115752105556530134324663010121101243311001------898896-222101232001222
Q gi|254780348|r   70 ATAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQ------KGIIVD-RMMESEGKIFLHAYL  142 (364)
Q Consensus        70 atlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~------~GI~V~-~~~~~~~~~ln~~f~  142 (364)
                      +|||||||||      |.|+.+|+++||+|||||+.||+....|..+.....      .+++|. |++++||..|++.||
T Consensus       102 ~tlYtT~EPC------~mCa~ai~~agI~rVvyg~~d~~~g~~g~~~~l~~~~~~~~~~~~~v~~gvl~ee~~~llk~Ff  175 (189)
T 3dh1_A          102 TVLYVTVEPC------IMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLPNTGRPFQCIPGYRAEEAVEMLKTFY  175 (189)
T ss_dssp             EEEEEEECCB------HHHHHHHHHHTCCEEEEEECCTTTBTBTTSCBCTTCCCTTSSCCCEEECCTTHHHHHHHHHHHT
T ss_pred             CEEEECCCCH------HHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHH
T ss_conf             5468524881------9999999995998799997189988756247877654111389908986958999999999999


Q ss_pred             HHCCCCCCHHHHH
Q ss_conf             2011342220110
Q gi|254780348|r  143 TRQVEKRSHITLK  155 (364)
Q Consensus       143 ~~~~~~rP~V~lK  155 (364)
                      .....++|..-.|
T Consensus       176 ~~~r~~~p~~k~k  188 (189)
T 3dh1_A          176 KQENPNAPKSKVR  188 (189)
T ss_dssp             CC-----------
T ss_pred             HHHCCCCCCCCCC
T ss_conf             9866799977768