HHsearch results for GI: 254780348 and protein with PDBid: 3ir2_A
>3ir2_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrolase, metal-binding, zinc, alternative splicing, cytoplasm; HET: DNA; 2.25A {Homo sapiens} PDB: 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=94.24 E-value=0.099 Score=30.52 Aligned_cols=94 Identities=21% Similarity=0.257 Sum_probs=61.6
Q ss_pred CCHHHHHHHHHHCCH---H-C--CCEEEEECCCCCCCCCCCHHHHHHHHC-----CCCEEEEECC--CCCCCCCCCCCCC
Q ss_conf 984899999973001---0-6--988999057321157521055565301-----3432466301--0121101243311
Q gi|254780348|r 52 CPHAEVQALEEAGEE---A-R--GATAYVTLEPCSHYGRSPPCAQFIIEC-----GIRRVVVCVD--DPDVRVSGRGLQW 118 (364)
Q Consensus 52 ~~HAE~~al~~~~~~---~-~--~atlyvtLEPC~h~GktppC~~~ii~~-----gIk~Vvi~~~--DPnp~v~gkGi~~ 118 (364)
+-|||+.-|...... + . .-|.|+|=-||. .|++.|.+. .++-.++++. +..|+ .-.|...
T Consensus 78 ~~HAE~~Fl~~i~~~~ld~~~~Y~VTwy~SwSPC~------~CA~~va~FL~~~~~v~L~If~sRLY~~~~~-~q~gLr~ 150 (207)
T 3ir2_A 78 GRHAELCFLDVIPFWKLDLDQDYRVTCFTSWSPCF------SCAQEMAKFISKNKHVSLCIKTARIYDDQGR-AQEGLRT 150 (207)
T ss_dssp CCCHHHHHHHHGGGGCCCTTSCEEEEEEEEECCCH------HHHHHHHHHHHHCTTEEEEEEEEECCCCSSS-HHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHH------HHHHHHHHHHHHCCCEEEEEEHHHHCCCCHH-HHHHHHH
T ss_conf 73489999998756167945437898877369739------9999999999768991798777652534607-8999999
Q ss_pred CCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHH
Q ss_conf 001898896222101232001222201134222011
Q gi|254780348|r 119 LSQKGIIVDRMMESEGKIFLHAYLTRQVEKRSHITL 154 (364)
Q Consensus 119 L~~~GI~V~~~~~~~~~~ln~~f~~~~~~~rP~V~l 154 (364)
|.++|+.|..+--+|...-=+-|.. ..++||.-.
T Consensus 151 L~~aG~~v~iM~~~eF~~CW~nFV~--~~~~~F~PW 184 (207)
T 3ir2_A 151 LAEAGAKISIMTYSEFKHCWDTFVD--HQGAPFQPW 184 (207)
T ss_dssp HHHTTCEEEECCHHHHHHHHHHHBC--CTTCCCCCC
T ss_pred HHHCCCCEEEECHHHHHHHHHHHHH--CCCCCCCCH
T ss_conf 9987997896181888999999870--899988876