HHsearch results for GI: 254780348 and protein with PDBid: 3nrr_A
>3nrr_A Dihydrofolate reductase-thymidylate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, niaid, DHFR; HET: NAP D16 UMP; 1.80A {Babesia bovis} PDB: 3kjr_A* 3i3r_A* 3k2h_A*
Probab=98.33 E-value=1.2e-05 Score=57.03 Aligned_cols=159 Identities=16% Similarity=0.083 Sum_probs=95.1
Q ss_pred HHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH------------CCCCEEEEHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 20110102787720211365322221013566676420------------144036631220134542354434444344
Q gi|254780348|r 151 HITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRA------------QSDAILVGIGTVLADDPELTCRLNGLQEHS 218 (364)
Q Consensus 151 ~V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa------------~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~ 218 (364)
-+.+=.|++.||-|+ .+|+--|-.-++..++..++-. .-++|++|.+|... ++....+-
T Consensus 14 ~i~lIvA~~~n~~IG-~~~~LPW~~lp~Dl~~Fk~~T~~~~~~~~~~~~~~~n~VIMGRkT~eS--------ip~~~~PL 84 (515)
T 3nrr_A 14 DLTIFVAVALNKVIG-HKNQIPWPHITHDFRFLRNGTTYIPPEVLSKNPDIQNVVIFGRKTYES--------IPKASLPL 84 (515)
T ss_dssp CEEEEEEECTTSEEE-BTTBCSSCCCHHHHHHHHHHHHCCCHHHHHHSTTCCEEEEEEHHHHHT--------SCGGGCSC
T ss_pred CEEEEEEECCCCEEC-CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHH--------CCCCCCCC
T ss_conf 689999988999276-799688865999999999973689764433435679589980674766--------89777889
Q ss_pred CEE--EEECCCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHH-HCCCCEEEECCH
Q ss_conf 215--76446689980221003444670798546554210110022322222333222788999986-079969998123
Q gi|254780348|r 219 PMR--IILDPHFKLSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILV-GRGVTSLLVEGG 295 (364)
Q Consensus 219 P~r--iVld~~l~i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~-~~gi~~iLVEGG 295 (364)
|-| ||++++..- ..++.+. .++.++++.+. +.+...|+|-||
T Consensus 85 p~R~nIVlSr~~~~-------------------------------~~~~~~~----~sl~~al~~~~~~~~~~~i~IiGG 129 (515)
T 3nrr_A 85 KNRINVILSRTVKE-------------------------------VPGCLVY----EDLSTAIRDLRANVPHNKIFILGG 129 (515)
T ss_dssp TTEEEEEECSSCCC-------------------------------CTTEEEE----SSHHHHHHHHHHHSCCSCEEECCC
T ss_pred CCCEEEEECCCCCC-------------------------------CCCCEEE----CCHHHHHHHHHHCCCCCCEEEECC
T ss_conf 77959998998976-------------------------------8996898----999999999984168785899651
Q ss_pred HHHHHHHHHCCCCCEEEEEEECEEECCCCCCCCCCCCCCCCCCEEEEEEE--ECCC---EEEEEEECC
Q ss_conf 89999999788988999996074326887523334545444640544688--6793---699995074
Q gi|254780348|r 296 AAVAHSFINSRLVDSIILYRSQIVIGEGGIPSPLEEGYLEKNFMCVRRDY--FGSD---VCLEYIGKN 358 (364)
Q Consensus 296 ~~l~~sfl~~~LvDEl~ifiaP~ilG~~g~~s~~~~~~~~~~~~l~~~~~--ig~D---v~~~y~~k~ 358 (364)
+++...||...++|+++++.-..-..++. -+| .. ...|.+.+... -.++ -+.+|.|++
T Consensus 130 ~~IY~~~l~~~~~d~i~lT~I~~~~~gD~-~FP--~i--~~~~~~~~~~~~~~~~~~~y~F~~y~Rk~ 192 (515)
T 3nrr_A 130 SFLYKEVLDNGLCDKIYLTRLNKEYPGDT-YFP--DI--PDTFEITAISPTFSTDFVSYDFVIYERKD 192 (515)
T ss_dssp HHHHHHHHHTTCEEEEEEEEESSCCCCSE-ECC--CC--CTTEEEEEECCCEECSSCEEEEEEEEECC
T ss_pred HHHHHHHCCCCCCCEEEEEEEEEEECCCC-CCC--CC--CCCCEEEEEECCCCCCCCCEEEEEEEEEC
T ss_conf 99999861634589899988805754773-178--88--74116999842546799965999999856