HHSEARCH alignment of GI: 254780348 and SCOP domain: d1r5ta_

Alignment
>d1r5ta_ c.97.1.1 (A:) mono-domain cytidine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.39  E-value=0.028  Score=32.58  Aligned_cols=85  Identities=24%  Similarity=0.411  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHCCC---CCCCCCCEEEEEE-ECCEEEEEEECC----CCCCCHHHHHHHHHH---CCHHCCCEEEEE--
Q ss_conf             999999999987088---2188896479998-699899998438----876984899999973---001069889990--
Q gi|254780348|r    9 RFMSAALRFSRWHVG---LTSTNPSVACLIV-KDGIVIGRGVTA----YGGCPHAEVQALEEA---GEEARGATAYVT--   75 (364)
Q Consensus         9 ~~m~~a~~~a~~~~g---~t~pNP~Vg~viv-~~g~ii~~g~~~----~~G~~HAE~~al~~~---~~~~~~atlyvt--   75 (364)
                      +-++..++.|.+...   .-+-|=.|||++. +||+|+ .|...    ...+-|||..||-++   |.+.....+.++  
T Consensus         8 ~~~~~L~~~a~~a~~~ayaPYS~f~VGAAl~t~~G~I~-~G~NvEnas~~~~lCAEr~Ai~~a~~~g~~~~~~~~vv~~~   86 (141)
T d1r5ta_           8 RQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIF-TGANVENASYSNCICAERSAMIQVLMAGHRSGWKCMVICGD   86 (141)
T ss_dssp             HHHHHHHHHHHHHGGGCBCTTTCCCEEEEEECTTSCEE-EEECBCCSSGGGCBCHHHHHHHHHHHTTCCSCCCEEEEEES
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf             99999999999999818288669947899996899898-88861245555566777889999887068764068998506


Q ss_pred             -----CCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf             -----5732115752105556530134324
Q gi|254780348|r   76 -----LEPCSHYGRSPPCAQFIIECGIRRV  100 (364)
Q Consensus        76 -----LEPC~h~GktppC~~~ii~~gIk~V  100 (364)
                           +-||      +-|-+.|.+.+-+..
T Consensus        87 ~~~~~~sPC------G~CRQ~l~E~~~~~~  110 (141)
T d1r5ta_          87 SEDQCVSPC------GVCRQFINEFVVKDF  110 (141)
T ss_dssp             CSSSCCCCC------HHHHHHHHTTSCTTC
T ss_pred             CCCCCCCCH------HHHHHHHHHHCCCCC
T ss_conf             777778822------879999999668985


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Cytidine deaminase
domain: mono-domain cytidine deaminase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]