HHSEARCH alignment of GI: 254780348 and SCOP domain: d1wwra1

Alignment
>d1wwra1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Aquifex aeolicus [TaxId: 63363]}
Probab=100.00  E-value=8.5e-34  Score=245.32  Aligned_cols=133  Identities=23%  Similarity=0.333  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCC----CCCCHHHHHHHHHHCCH-----HCCCEEEEEC
Q ss_conf             89999999999998708821888964799986998999984388----76984899999973001-----0698899905
Q gi|254780348|r    6 FDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAY----GGCPHAEVQALEEAGEE-----ARGATAYVTL   76 (364)
Q Consensus         6 ~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~----~G~~HAE~~al~~~~~~-----~~~atlyvtL   76 (364)
                      .|++||++|+++|+++.  ..++|+||||||++|+||+.|++..    .+.+|||++|+++|..+     +.|+|+||||
T Consensus         2 ~~e~fM~~Ai~~A~~a~--~~~~~pVGaVIV~~~~ii~~g~n~~~~~~~~~~HAE~~ai~~a~~~~~~~~l~~~tlY~Tl   79 (151)
T d1wwra1           2 GKEYFLKVALREAKRAF--EKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRLNTKYLEGCELYVTL   79 (151)
T ss_dssp             SHHHHHHHHHHHHHHHH--HTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTCSCCTTEEEEESS
T ss_pred             CHHHHHHHHHHHHHHHH--HCCCCCEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
T ss_conf             88999999999999875--2699999999997995666303322246750113899999999875385655786765002


Q ss_pred             CCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC----CCEEEECCCCHHHHHHHHHHHHCC
Q ss_conf             7321157521055565301343246630101211012433110018----988962221012320012222011
Q gi|254780348|r   77 EPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQK----GIIVDRMMESEGKIFLHAYLTRQV  146 (364)
Q Consensus        77 EPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~----GI~V~~~~~~~~~~ln~~f~~~~~  146 (364)
                      |||.|      |+.+|+++||+|||||+.||++.+.|++++.|+++    +++|.++..+||.+|++.||...+
T Consensus        80 EPC~m------C~~ai~~~~I~rVvyg~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ee~~~Ll~~Ff~~~R  147 (151)
T d1wwra1          80 EPCIM------CSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLNHRVKWEYYPLEEASELLSEFFKKLR  147 (151)
T ss_dssp             CCBHH------HHHHHHHTTCSEEEESSCCTTTBTTTTSCCGGGCTTCSSCCEEEECCCHHHHHHHHHHHHHHH
T ss_pred             CCCCH------HHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHH
T ss_conf             68827------888999855885899845699875343888876421589988996039999999999999972


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Deoxycytidylate deaminase-like
domain: tRNA adenosine deaminase TadA
species: Aquifex aeolicus [TaxId: 63363]