HHSEARCH alignment of GI: 254780348 and SCOP domain: d1z3aa1

Alignment
>d1z3aa1 c.97.1.2 (A:13-168) tRNA adenosine deaminase TadA {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=1.7e-34  Score=249.95  Aligned_cols=138  Identities=28%  Similarity=0.413  Sum_probs=124.4

Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCCC----CCHHHHHHHHHHCC-----HHCCCEEEE
Q ss_conf             778999999999999870882188896479998699899998438876----98489999997300-----106988999
Q gi|254780348|r    4 SSFDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYGG----CPHAEVQALEEAGE-----EARGATAYV   74 (364)
Q Consensus         4 ~~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~~G----~~HAE~~al~~~~~-----~~~~atlyv   74 (364)
                      .-.|++||++|+++|+++  .+.|||+||||||+||+|||+|++...|    ..|||++|++++..     ...++++|+
T Consensus         4 ~~~~e~~M~~Ai~~A~~a--~~~~~~pvGaViv~~g~Iia~g~n~~~~~~~~~~HAE~~ai~~a~~~~~~~~l~~~~lyt   81 (156)
T d1z3aa1           4 EFSHEYWMRHALTLAKRA--WDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYV   81 (156)
T ss_dssp             TTSHHHHHHHHHHHHHHH--HHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTCEEEE
T ss_pred             CCCHHHHHHHHHHHHHHH--CCCCCCCEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE
T ss_conf             558999999999999985--458989899999989908999601114557540567777677777531365545744640


Q ss_pred             ECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCC----CEEE-ECCCCHHHHHHHHHHHHCCCCC
Q ss_conf             0573211575210555653013432466301012110124331100189----8896-2221012320012222011342
Q gi|254780348|r   75 TLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKG----IIVD-RMMESEGKIFLHAYLTRQVEKR  149 (364)
Q Consensus        75 tLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~G----I~V~-~~~~~~~~~ln~~f~~~~~~~r  149 (364)
                      |||||      |+|+.+|+++||+|||||+.||++.+.|+|+..|+++|    |+|. |++++||..|++.||+.+++++
T Consensus        82 T~ePC------~mC~~aii~~gI~rVvyg~~d~~~~~~g~~~~~l~~~~~~~~ieV~~gvl~ee~~~ll~~Ff~~~r~~~  155 (156)
T d1z3aa1          82 TLEPC------VMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRRQEI  155 (156)
T ss_dssp             EECCC------HHHHHHHHHHTCSEEEEEECCTTTCTBTTSCBCTTCTTCSSCCEEECCTTHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCC------CCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf             25665------432658987377657997523887655718899871788999689908589999999999999998574


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Deoxycytidylate deaminase-like
domain: tRNA adenosine deaminase TadA
species: Escherichia coli [TaxId: 562]