HHSEARCH alignment of GI: 254780348 and SCOP domain: d2b3za2

Alignment
>d2b3za2 c.97.1.2 (A:1-145) Riboflavin biosynthesis protein RibD {Bacillus subtilis [TaxId: 1423]}
Probab=100.00  E-value=4.3e-43  Score=308.04  Aligned_cols=144  Identities=40%  Similarity=0.706  Sum_probs=140.1

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHCCHHCCCEEEEECCCCCCCCCC
Q ss_conf             89999999999998708821888964799986998999984388769848999999730010698899905732115752
Q gi|254780348|r    6 FDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYGGCPHAEVQALEEAGEEARGATAYVTLEPCSHYGRS   85 (364)
Q Consensus         6 ~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~~G~~HAE~~al~~~~~~~~~atlyvtLEPC~h~Gkt   85 (364)
                      +|++||++|+++|+++.+.+.|||+||||||+||+||+.|+++..|.+|||.+|+..|..++.++|+|||||||+|+|+|
T Consensus         1 ~De~fM~~Al~~A~~a~~~~~~~p~VGaViV~~g~ii~~g~n~~~~~~hae~~a~~~a~~~~~~~~lyvtlepc~~~~~~   80 (145)
T d2b3za2           1 MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYVTLEPCSHYGKT   80 (145)
T ss_dssp             CHHHHHHHHHHHHGGGTTSSTTSCCCEEEEESSSSEEEEEECCSTTSCCHHHHHHHHHGGGGTTCEEEESSCCCCCCSSS
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             94999999999998614677999988999995572101222233577732657899989886334533345643456896


Q ss_pred             CHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE-ECCCCHHHHHHHHHHHHCCCCC
Q ss_conf             105556530134324663010121101243311001898896-2221012320012222011342
Q gi|254780348|r   86 PPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGIIVD-RMMESEGKIFLHAYLTRQVEKR  149 (364)
Q Consensus        86 ppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI~V~-~~~~~~~~~ln~~f~~~~~~~r  149 (364)
                      |+|+.+|+++||+|||||+.||++.+.|+|+++|+++||+|. |++++||.+|++.||++.+++.
T Consensus        81 ~mC~~aIi~agI~rVvyg~~d~~~~~~g~~~~~l~~~gieV~~gvl~~e~~~ll~~Ff~~~r~gl  145 (145)
T d2b3za2          81 PPCAELIINSGIKRVFVAMRDPNPLVAGRGISMMKEAGIEVREGILADQAERLNEKFLHFMRTGL  145 (145)
T ss_dssp             CCHHHHHHHHTCCEEEESSCCSCTTTTTHHHHHHHTTTCEEEECTTHHHHHHHTHHHHHHHHHSS
T ss_pred             CHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             20889999828995775133467655573889998099989808479999999999999986198


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Deoxycytidylate deaminase-like
domain: Riboflavin biosynthesis protein RibD
species: Bacillus subtilis [TaxId: 1423]