HHSEARCH alignment of GI: 254780348 and SCOP domain: d2d30a1

Alignment
>d2d30a1 c.97.1.1 (A:1-124) mono-domain cytidine deaminase {Bacillus anthracis [TaxId: 1392]}
Probab=95.65  E-value=0.022  Score=33.38  Aligned_cols=92  Identities=22%  Similarity=0.296  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCEEEEEE-ECCEEEEEEECCCC----CCCHHHHHHHHHHCCH--HCCCEEEEEC---
Q ss_conf             999999999999870882188896479998-69989999843887----6984899999973001--0698899905---
Q gi|254780348|r    7 DARFMSAALRFSRWHVGLTSTNPSVACLIV-KDGIVIGRGVTAYG----GCPHAEVQALEEAGEE--ARGATAYVTL---   76 (364)
Q Consensus         7 d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv-~~g~ii~~g~~~~~----G~~HAE~~al~~~~~~--~~~atlyvtL---   76 (364)
                      ++..++.|++..++. ..-+-|-.|||.+. +||+|+ .|.....    -+-|||..||-++-..  .+-..+.|.=   
T Consensus         3 ~~~L~~~A~~a~~~a-yaPyS~f~VGAal~~~~G~i~-~G~NvEn~s~~~~~CAEr~Ai~~a~~~g~~~~~~i~v~~~~~   80 (124)
T d2d30a1           3 SKQLIQEAIEARKQA-YVPYSKFQVGAALLTQDGKVY-RGCNVENASYGLCNCAERTALFKAVSEGDKEFVAIAIVADTK   80 (124)
T ss_dssp             HHHHHHHHHHHHTTC-BCTTTCCCEEEEEEETTCCEE-EEECBCCSSGGGCBCHHHHHHHHHHHTTCCCEEEEEEEESCS
T ss_pred             HHHHHHHHHHHHHCC-CCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCC
T ss_conf             899999999999718-388669968999996899999-998632555776548899998988765873057999982787


Q ss_pred             ---CCCCCCCCCCHHHHHHHHCCCC--EEEEECCC
Q ss_conf             ---7321157521055565301343--24663010
Q gi|254780348|r   77 ---EPCSHYGRSPPCAQFIIECGIR--RVVVCVDD  106 (364)
Q Consensus        77 ---EPC~h~GktppC~~~ii~~gIk--~Vvi~~~D  106 (364)
                         -||      +-|-+.|.+.+-.  +|++...|
T Consensus        81 ~~~~PC------G~CRQ~l~E~~~~~~~i~~~~~~  109 (124)
T d2d30a1          81 RPVPPC------GACRQVMVELCKQDTKVYLSNLH  109 (124)
T ss_dssp             SCCCCC------HHHHHHHHHHSCTTCEEEEECSS
T ss_pred             CCCCCC------HHHHHHHHHHCCCCCEEEEECCC
T ss_conf             755873------57899999856899489998699


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Cytidine deaminase
domain: mono-domain cytidine deaminase
species: Bacillus anthracis [TaxId: 1392]