HHSEARCH alignment of GI: 254780348 and SCOP domain: d2fr5a1

Alignment

Probab=96.03  E-value=0.02  Score=33.53  Aligned_cols=81  Identities=21%  Similarity=0.241  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCEEEEEE-ECCEEEEEEECCC----CCCCHHHHHHHHHHC---CHHCCCEEEEE-----
Q ss_conf             9999999999870882188896479998-6998999984388----769848999999730---01069889990-----
Q gi|254780348|r    9 RFMSAALRFSRWHVGLTSTNPSVACLIV-KDGIVIGRGVTAY----GGCPHAEVQALEEAG---EEARGATAYVT-----   75 (364)
Q Consensus         9 ~~m~~a~~~a~~~~g~t~pNP~Vg~viv-~~g~ii~~g~~~~----~G~~HAE~~al~~~~---~~~~~atlyvt-----   75 (364)
                      +.+..|. .|++....-+-|-.|||++. +||+|. .|....    ..+-|||..||-++-   .+...+.+.++     
T Consensus         7 ~l~~~A~-~a~~~AyaPYS~f~VGAa~~~~dG~i~-~G~NvEnasy~~~iCAEr~Ai~~a~~~g~~~~~~~~~~~~~~~~   84 (136)
T d2fr5a1           7 RLLLSSR-EAKKSAYCPYSRFPVGAALLTGDGRIF-SGCNIENACYPLGVCAERTAIQKAISEGYKDFRAIAISSDLQEE   84 (136)
T ss_dssp             HHHHHHH-HHHTTCBCTTTCCCEEEEEEETTSCEE-EEECBCCSSGGGCBCHHHHHHHHHHHTTCCCEEEEEEEESCSSS
T ss_pred             HHHHHHH-HHHHCCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCHHHEEEEEEECCCCCCEEEEEEECCCCCC
T ss_conf             9999999-999628488669967899995899899-98740356665663522100023101288517999831146788


Q ss_pred             -CCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             -5732115752105556530134
Q gi|254780348|r   76 -LEPCSHYGRSPPCAQFIIECGI   97 (364)
Q Consensus        76 -LEPC~h~GktppC~~~ii~~gI   97 (364)
                       +-||      +-|-+.|.+.+-
T Consensus        85 ~~~PC------G~CRQ~l~E~~~  101 (136)
T d2fr5a1          85 FISPC------GACRQVMREFGT  101 (136)
T ss_dssp             CCCCC------HHHHHHHHHTCS
T ss_pred             CCCCC------HHHHHHHHHHCC
T ss_conf             87865------666589986099

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Cytidine deaminase
domain: mono-domain cytidine deaminase
species: Mouse (Mus musculus) [TaxId: 10090]