Query gi|254780348|ref|YP_003064761.1| 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine [Candidatus Liberibacter asiaticus str. psy62] Match_columns 364 No_of_seqs 245 out of 4143 Neff 7.0 Searched_HMMs 13730 Date Wed Jun 1 04:24:27 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780348.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d2b3za1 c.71.1.2 (A:146-359) R 100.0 0 0 355.2 16.1 206 150-356 1-213 (214) 2 d2azna1 c.71.1.2 (A:6-224) HTP 100.0 0 0 334.4 16.7 209 147-358 1-219 (219) 3 d2hxva1 c.71.1.2 (A:148-345) R 100.0 4.2E-45 0 321.7 15.6 194 150-356 1-197 (198) 4 d2hxva2 c.97.1.2 (A:1-147) Rib 100.0 1.8E-44 0 317.3 13.3 143 6-149 1-147 (147) 5 d2b3za2 c.97.1.2 (A:1-145) Rib 100.0 4.3E-43 0 308.0 11.7 144 6-149 1-145 (145) 6 d1z3aa1 c.97.1.2 (A:13-168) tR 100.0 1.7E-34 1.3E-38 250.0 11.1 138 4-149 4-155 (156) 7 d2b3ja1 c.97.1.2 (A:1-151) tRN 100.0 4.5E-34 3.3E-38 247.2 12.9 135 5-147 2-150 (151) 8 d1wwra1 c.97.1.2 (A:1-151) tRN 100.0 8.5E-34 6.2E-38 245.3 11.3 133 6-146 2-147 (151) 9 d1p6oa_ c.97.1.2 (A:) Cytosine 100.0 8.8E-31 6.4E-35 225.0 10.5 131 3-144 5-145 (156) 10 d1wkqa_ c.97.1.2 (A:) Guanine 100.0 1.7E-30 1.3E-34 223.0 11.7 138 6-151 4-158 (158) 11 d1vq2a_ c.97.1.2 (A:) Deoxycyt 99.9 1.3E-27 9.1E-32 203.7 12.2 128 7-145 3-190 (193) 12 d2a8na1 c.97.1.2 (A:2-131) Cyt 99.9 7.3E-27 5.3E-31 198.5 12.8 115 5-127 1-128 (130) 13 d2g84a1 c.97.1.2 (A:1-189) Put 99.9 2.6E-26 1.9E-30 194.8 10.4 132 5-144 24-180 (189) 14 d1d1ga_ c.71.1.1 (A:) Dihydrof 99.8 3.9E-19 2.8E-23 146.4 13.9 159 152-357 3-164 (164) 15 d1seja1 c.71.1.1 (A:3-180) Bif 98.4 2.3E-06 1.7E-10 60.2 11.4 158 153-358 6-177 (178) 16 d1vdra_ c.71.1.1 (A:) Dihydrof 98.4 2.8E-06 2.1E-10 59.6 11.1 154 153-356 3-156 (157) 17 d1j3ka_ c.71.1.1 (A:) Bifuncti 98.3 1.5E-05 1.1E-09 54.7 14.2 82 273-358 144-230 (231) 18 d3dfra_ c.71.1.1 (A:) Dihydrof 98.3 7.8E-06 5.6E-10 56.6 12.5 151 154-357 3-161 (162) 19 d2fzia1 c.71.1.1 (A:1-206) Dih 98.3 1.1E-06 8E-11 62.3 7.6 133 148-323 3-153 (206) 20 d1kmva_ c.71.1.1 (A:) Dihydrof 98.2 1.2E-05 9E-10 55.3 10.6 159 154-358 6-186 (186) 21 d1ra9a_ c.71.1.1 (A:) Dihydrof 97.9 0.00015 1.1E-08 48.0 11.7 151 152-357 2-159 (159) 22 d1alna2 c.97.1.1 (A:151-294) T 97.8 2.1E-05 1.5E-09 53.8 5.9 98 5-103 36-144 (144) 23 d1df7a_ c.71.1.1 (A:) Dihydrof 97.3 0.0011 8.3E-08 42.0 9.8 117 152-321 2-120 (159) 24 d1aoea_ c.71.1.1 (A:) Dihydrof 97.3 0.00033 2.4E-08 45.6 6.3 125 149-317 3-136 (192) 25 d2z3ga1 c.97.1.1 (A:2-124) Bla 96.7 0.0097 7.1E-07 35.7 9.6 93 2-103 1-106 (123) 26 d1r5ta_ c.97.1.1 (A:) mono-dom 96.4 0.028 2.1E-06 32.6 10.5 85 9-100 8-110 (141) 27 d2fr5a1 c.97.1.1 (A:11-146) mo 96.0 0.02 1.5E-06 33.5 8.3 81 9-97 7-101 (136) 28 d1uwza_ c.97.1.1 (A:) mono-dom 95.9 0.017 1.2E-06 34.1 7.4 90 9-106 5-107 (130) 29 d2d30a1 c.97.1.1 (A:1-124) mon 95.7 0.022 1.6E-06 33.4 7.1 92 7-106 3-109 (124) 30 d1alna1 c.97.1.1 (A:1-150) Two 95.6 0.033 2.4E-06 32.1 7.9 79 10-96 52-140 (150) 31 d1juva_ c.71.1.1 (A:) Dihydrof 94.7 0.14 1E-05 27.9 9.5 37 285-323 119-155 (193) 32 d1twda_ c.1.30.1 (A:) Copper h 70.4 2.5 0.00018 19.4 4.0 121 69-204 50-182 (247) 33 d1zcza2 c.97.1.4 (A:158-452) A 67.2 3.6 0.00026 18.4 10.0 94 11-126 47-140 (295) 34 d1o13a_ c.55.5.1 (A:) Hypothet 58.3 2.8 0.00021 19.1 2.4 32 89-126 57-88 (107) 35 d1i4na_ c.1.2.4 (A:) Indole-3- 57.3 2.2 0.00016 19.8 1.7 29 178-206 212-240 (251) 36 d1piia2 c.1.2.4 (A:1-254) Indo 55.3 1.8 0.00013 20.5 0.9 28 179-206 219-246 (254) 37 d1vc4a_ c.1.2.4 (A:) Indole-3- 52.5 1.9 0.00014 20.2 0.7 11 188-198 127-137 (254) 38 d1gsoa2 c.30.1.1 (A:-2-103) Gl 52.3 2.6 0.00019 19.3 1.4 79 50-134 11-101 (105) 39 d1u9ya2 c.61.1.2 (A:156-284) P 51.6 1.8 0.00013 20.4 0.5 55 68-124 49-103 (129) 40 d1qzua_ c.34.1.1 (A:) 4'-phosp 51.1 3.3 0.00024 18.6 1.8 89 117-224 25-124 (181) 41 d2nu7a1 c.2.1.8 (A:2-120) Succ 50.8 3.7 0.00027 18.3 2.0 22 37-58 5-26 (119) 42 d1dkua2 c.61.1.2 (A:167-315) P 47.7 3.8 0.00028 18.2 1.6 54 69-124 50-103 (149) 43 d1eo1a_ c.55.5.1 (A:) Hypothet 47.2 5.6 0.00041 17.1 2.4 32 263-295 64-95 (124) 44 d1zbfa1 c.55.3.1 (A:62-193) BH 46.0 4.3 0.00031 17.9 1.7 43 22-65 10-57 (132) 45 d1oi7a1 c.2.1.8 (A:1-121) Succ 45.8 4.1 0.0003 18.0 1.6 23 174-197 15-37 (121) 46 d1vhca_ c.1.10.1 (A:) Hypothet 39.8 6 0.00044 16.9 1.6 28 175-202 48-75 (212) 47 d1mxsa_ c.1.10.1 (A:) KDPG ald 38.3 6.2 0.00045 16.8 1.5 28 175-202 51-78 (216) 48 d1hc8a_ a.4.7.1 (A:) Ribosomal 35.7 6 0.00043 16.9 1.1 28 83-113 4-32 (74) 49 d1a53a_ c.1.2.4 (A:) Indole-3- 35.3 7.8 0.00057 16.1 1.7 15 278-292 217-231 (247) 50 d1mmsa1 a.4.7.1 (A:71-140) Rib 34.7 6.1 0.00045 16.8 1.0 27 84-113 1-28 (70) 51 d1r2ra_ c.1.1.1 (A:) Triosepho 34.4 7.9 0.00058 16.1 1.5 41 263-304 200-240 (246) 52 d2c4ka2 c.61.1.2 (A:167-350) P 32.8 7.4 0.00054 16.3 1.2 41 274-314 98-142 (184) 53 d1wbha1 c.1.10.1 (A:1-213) KDP 32.1 9.2 0.00067 15.6 1.6 123 175-307 49-177 (213) 54 d1n55a_ c.1.1.1 (A:) Triosepho 30.2 7 0.00051 16.4 0.7 40 263-303 203-242 (249) 55 d1o5xa_ c.1.1.1 (A:) Triosepho 28.4 8.9 0.00064 15.7 1.0 41 263-304 200-240 (246) 56 d1kv5a_ c.1.1.1 (A:) Triosepho 27.8 8.4 0.00061 15.9 0.8 40 263-303 203-242 (249) 57 d2b0va1 d.113.1.1 (A:4-149) Hy 27.3 12 0.00085 14.9 1.4 42 26-67 1-55 (146) 58 d1mo0a_ c.1.1.1 (A:) Triosepho 27.1 9.6 0.0007 15.5 1.0 40 263-303 209-248 (257) 59 d1b9ba_ c.1.1.1 (A:) Triosepho 25.6 6.9 0.0005 16.5 -0.0 41 263-304 204-244 (252) 60 d3cjrb1 a.4.7.1 (B:71-137) Rib 24.8 9.2 0.00067 15.6 0.5 26 85-113 1-27 (67) 61 d1p90a_ c.55.5.2 (A:) NafY cor 24.8 17 0.0012 13.8 2.1 44 76-127 49-92 (123) 62 d1aw1a_ c.1.1.1 (A:) Triosepho 24.5 17 0.0013 13.8 2.5 41 263-304 204-245 (255) 63 d1g5qa_ c.34.1.1 (A:) Epidermi 24.0 17 0.0012 13.8 1.8 82 116-223 22-113 (174) 64 d1vqoi1 a.4.7.1 (I:71-140) Rib 23.6 12 0.00088 14.8 0.9 26 85-113 2-28 (70) 65 d1o2da_ e.22.1.2 (A:) Alcohol 23.0 18 0.0013 13.6 5.7 68 59-126 16-89 (359) 66 d1jl1a_ c.55.3.1 (A:) RNase H 22.0 19 0.0014 13.5 3.9 44 23-67 9-57 (152) 67 d2q4qa1 c.103.1.1 (A:2-122) Hy 20.4 21 0.0015 13.2 2.6 13 186-198 57-69 (121) 68 d1neya_ c.1.1.1 (A:) Triosepho 20.4 7.8 0.00057 16.1 -0.6 39 264-303 202-240 (247) No 1 >d2b3za1 c.71.1.2 (A:146-359) Riboflavin biosynthesis protein RibD {Bacillus subtilis [TaxId: 1423]} Probab=100.00 E-value=0 Score=355.15 Aligned_cols=206 Identities=30% Similarity=0.412 Sum_probs=186.1 Q ss_pred CHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC Q ss_conf 22011010278772021136532222101356667642014403663122013454235443444434421576446689 Q gi|254780348|r 150 SHITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQEHSPMRIILDPHFK 229 (364) Q Consensus 150 P~V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~riVld~~l~ 229 (364) |||++|+|+|+|||||..+|+++||||++||+++|+||+++||||+|++|++.|||+||+|.++. .++|.+||+|++++ T Consensus 1 P~V~~k~A~SlDG~Ia~~~g~s~wit~~~sr~~~h~lR~~~dailvG~~Tv~~D~p~l~~R~~~~-~~~p~~vv~d~~l~ 79 (214) T d2b3za1 1 PYVTLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPNV-TKQPVRVILDTVLS 79 (214) T ss_dssp CEEEEEEEEETTSBSSCTTSCCTTSSCHHHHHHHTTHHHHSSEEEEEHHHHHHHCCCCCCCSTTC-CSCCEEEEECTTCC T ss_pred CEEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHCCCCCCC-CCCCCCCCCCCCCC T ss_conf 97999998879788788899667889989999999999861211233053101320000246543-23330211133455 Q ss_pred CCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCC--CCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCC Q ss_conf 980221003444670798546554210110022322222333--222788999986079969998123899999997889 Q gi|254780348|r 230 LSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCD--CRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRL 307 (364) Q Consensus 230 i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~--~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~L 307 (364) +++++++|.......+++++...+..+...+...++.++... ..|++++++.|+++||++||||||++++++||++|| T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~L~~~gi~~ilvEGG~~l~~sfl~~~L 159 (214) T d2b3za1 80 IPEDAKVICDQIAPTWIFTTARADEEKKKRLSAFGVNIFTLETERIQIPDVLKILAEEGIMSVYVEGGSAVHGSFVKEGC 159 (214) T ss_dssp CCTTCHHHHSCSSCEEEEECTTSCHHHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHTC T ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCC T ss_conf 35211278740356411111112344555553036542112111212389999998779977999726788899985574 Q ss_pred CCEEEEEEECEEECCCCCCCCCCCCCC-----CCCCEEEEEEEECCCEEEEEEE Q ss_conf 889999960743268875233345454-----4464054468867936999950 Q gi|254780348|r 308 VDSIILYRSQIVIGEGGIPSPLEEGYL-----EKNFMCVRRDYFGSDVCLEYIG 356 (364) Q Consensus 308 vDEl~ifiaP~ilG~~g~~s~~~~~~~-----~~~~~l~~~~~ig~Dv~~~y~~ 356 (364) |||+++|+||+++|+++.+++++.... ...|++++++++|+|++++|++ T Consensus 160 vDEl~l~iaP~ilG~~~~~~~~~~~~~~~l~~~~~l~l~~~~~~g~Di~l~~~p 213 (214) T d2b3za1 160 FQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQIGRDIKLTAKP 213 (214) T ss_dssp CSEEEEEEESBCCCCSSSCBSSCSSCCSSTTSSCBEEEEEEEEETTEEEEEEEE T ss_pred HHEEEEEECCEEECCCCCCCCCCCCCCCCHHHCCCCEEEEEEEECCEEEEEEEE T ss_conf 213656887756558887654477571284446265864689989829999997 No 2 >d2azna1 c.71.1.2 (A:6-224) HTP reductase {Methanococcus jannaschii [TaxId: 2190]} Probab=100.00 E-value=0 Score=334.36 Aligned_cols=209 Identities=27% Similarity=0.454 Sum_probs=177.7 Q ss_pred CCCCHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEECC Q ss_conf 34222011010278772021136532222101356667642014403663122013454235443444434421576446 Q gi|254780348|r 147 EKRSHITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQEHSPMRIILDP 226 (364) Q Consensus 147 ~~rP~V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~riVld~ 226 (364) .+||||++|+|+|+|||||..+|++ ||||++|+.++|+||+.+||||+|++|++.|||+|++|..+ ..++|.+||+|+ T Consensus 1 ~~RP~V~lk~a~SlDG~ia~~~g~~-~is~~~~~~~~~~lR~~~dailvG~~Tv~~dnp~l~~r~~~-~~~~~~~vv~d~ 78 (219) T d2azna1 1 EKKPYIISNVGMTLDGKLATINNDS-RISCEEDLIRVHKIRANVDGIMVGIGTVLKDDPRLTVHKIK-SDRNPVRIVVDS 78 (219) T ss_dssp CCCCEEEEEEEEETTCBSSCTTCCC-CCCCHHHHHHHHHHHHTSSEEEEEHHHHHHHCCCCSCCSSC-CSSCCEEEEECT T ss_pred CCCCEEEEEEEECCCCCEECCCCCC-CCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHEEEECCC-CCCCCCEEEEEC T ss_conf 9988799999997878888899987-84898999999999986286332633443122110231146-555553499627 Q ss_pred CCCCCHHHHHCCCCCCCEEEEECCCCCCC---HHHHCCCCCCCCCCCCC--CCHHHHHHHHHHCCCCEEEECCHHHHHHH Q ss_conf 68998022100344467079854655421---01100223222223332--22788999986079969998123899999 Q gi|254780348|r 227 HFKLSLDSKIIKTALLAPVIIVTENDDPV---LALAFRKKNINIIYCDC--RDLKKLLTILVGRGVTSLLVEGGAAVAHS 301 (364) Q Consensus 227 ~l~i~~~~~l~~~~~~~~~ii~~~~~~~~---~~~~~~~~~v~vi~~~~--~dl~~iL~~L~~~gi~~iLVEGG~~l~~s 301 (364) ++++++++++|+... ..+++++...... +.......++.++..+. .||+++|+.|+++|+++|||||||+|+++ T Consensus 79 ~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~l~~L~~~g~~~llvEGG~~l~~s 157 (219) T d2azna1 79 KLRVPLNARVLNKDA-KTIIATTEDTNEEKEKKIKILEDMGVEVVKCGRGKVDLKKLMDILYDKGIKSILLEGGGTLNWG 157 (219) T ss_dssp TCCCCTTCGGGSTTS-CEEEEECSCCCHHHHHHHHHHHHTTCEEEECCSSSCCHHHHHHHHHHTTCCEEEEEECHHHHHH T ss_pred CCCCCHHHHHHHCCC-CCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHH T ss_conf 877455566642157-7236640453213444443201341799835888748999999987610658999218999999 Q ss_pred HHHCCCCCEEEEEEECEEECCCCCCCCCCCCC-----CCCCCEEEEEEEECCCEEEEEEECC Q ss_conf 99788988999996074326887523334545-----4446405446886793699995074 Q gi|254780348|r 302 FINSRLVDSIILYRSQIVIGEGGIPSPLEEGY-----LEKNFMCVRRDYFGSDVCLEYIGKN 358 (364) Q Consensus 302 fl~~~LvDEl~ifiaP~ilG~~g~~s~~~~~~-----~~~~~~l~~~~~ig~Dv~~~y~~k~ 358 (364) ||++|||||+++|+||+++|+++.++++.... ....|++++++++|+|++++|+.|+ T Consensus 158 fl~~~lvDEl~l~iaP~ilG~~~~~~~~~~~~~~~l~~~~~l~l~~~~~~g~dv~l~y~vkk 219 (219) T d2azna1 158 MFKEGLVDEVSVYIAPKIFGGKEAPTYVDGEGFKTVDECVKLELKNFYRLGEGIVLEFKVKK 219 (219) T ss_dssp HHHTTCCCEEEEEEESCCCCCTTSCBSSCSSCCSSGGGSCCEEEEEEEEETTEEEEEEEECC T ss_pred HHHHHHHHEEEEEECCEEECCCCCCCCCCCCCCCCHHHCCCCEEEEEEEECCEEEEEEEECC T ss_conf 99997765299998747766888766447777447446127666059998998999999779 No 3 >d2hxva1 c.71.1.2 (A:148-345) Riboflavin biosynthesis protein RibD {Thermotoga maritima [TaxId: 2336]} Probab=100.00 E-value=4.2e-45 Score=321.74 Aligned_cols=194 Identities=30% Similarity=0.394 Sum_probs=164.0 Q ss_pred CHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCC Q ss_conf 22011010278772021136532222101356667642014403663122013454235443444434421576446689 Q gi|254780348|r 150 SHITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQEHSPMRIILDPHFK 229 (364) Q Consensus 150 P~V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~riVld~~l~ 229 (364) |||++|+|+|+|||||..+|+++|||++ +|.++|+||+++||||||++|++.|||+||+|.+ ..++|.|||+|++++ T Consensus 1 P~V~lk~A~SlDG~ia~~~g~~~wit~~-~~~~~h~lRa~~DaIlvG~~Tv~~D~p~L~~R~~--~~~~P~rvVld~~~~ 77 (198) T d2hxva1 1 PFVALKYASTLDGKIADHRGDSKWITDK-LRFKVHEMRNIYSAVLVGAGTVLKDNPQLTCRLK--EGRNPVRVILDRKGV 77 (198) T ss_dssp CEEEEEEEEETTSEEECTTSCCTTSCST-THHHHHHHHHHSSEEEEEHHHHHHHCCCCCCCST--TSCCCEEEEECTTCT T ss_pred CEEEEEEEECCCCCEECCCCCCCCCCCH-HHHHHHHHHHHCCHHHHCCCCCCCCCCEEEECCC--CCCCCEEEEECCCCC T ss_conf 9799999996988967899987768848-9999999997355123234633012532543146--887643698666777 Q ss_pred CCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCC Q ss_conf 98022100344467079854655421011002232222233322278899998607996999812389999999788988 Q gi|254780348|r 230 LSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRLVD 309 (364) Q Consensus 230 i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~LvD 309 (364) ++.++..+.... .++++++++........... .....+++++|+.|+++|+++||||||++|+++||++ +| T Consensus 78 l~~~~~~~~~~~-~~~ii~~~~~~~~~~~~~~~------~~~~~~l~~il~~L~~~gi~~ilvEGG~~l~~sfl~~--~D 148 (198) T d2hxva1 78 LSGKVFRVFEEN-ARVIVFTESEEAEYPPHVEK------ALSDCSVESILRNLYERDIDSVLVEGGSKVFSEFLDH--AD 148 (198) T ss_dssp TTTCCCGGGSSS-SCEEEEESCSSCCCCTTSEE------EECCCCHHHHHHHHHHTTCCEEEECCCHHHHHHHGGG--CS T ss_pred CCHHHHHHCCCC-CCEEEEECCCCCCCCHHHCC------CCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH--CC T ss_conf 987787641589-72899964632112012101------3345899999999987799789873389999999974--85 Q ss_pred EEEEEEECEEECCCCCCCCC---CCCCCCCCCEEEEEEEECCCEEEEEEE Q ss_conf 99999607432688752333---454544464054468867936999950 Q gi|254780348|r 310 SIILYRSQIVIGEGGIPSPL---EEGYLEKNFMCVRRDYFGSDVCLEYIG 356 (364) Q Consensus 310 El~ifiaP~ilG~~g~~s~~---~~~~~~~~~~l~~~~~ig~Dv~~~y~~ 356 (364) |+++|+||+++|+ |.+.+. .......+|++++++.+|+|++++|++ T Consensus 149 e~~~~iaP~ilG~-g~~~~~~~~~~~~~~~~l~l~~~~~~g~di~l~~rp 197 (198) T d2hxva1 149 VVFGFYSTKIFGK-GLDVFSGYLSDVSVPPKFKVVNVEFSDSEFLVEMRP 197 (198) T ss_dssp EEEEEEESCCCSS-SEETTTTCCCCTTSCCCEEEEEEEEETTEEEEEEEE T ss_pred EEEEEECCHHHCC-CCCCCCCCHHHHHHCCCCEEEEEEEECCEEEEEEEE T ss_conf 9999985332068-841125521102325376787789989989999997 No 4 >d2hxva2 c.97.1.2 (A:1-147) Riboflavin biosynthesis protein RibD {Thermotoga maritima [TaxId: 2336]} Probab=100.00 E-value=1.8e-44 Score=317.32 Aligned_cols=143 Identities=42% Similarity=0.709 Sum_probs=136.8 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHC---CHHCCCEEEEECCCCCCC Q ss_conf 89999999999998708821888964799986998999984388769848999999730---010698899905732115 Q gi|254780348|r 6 FDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYGGCPHAEVQALEEAG---EEARGATAYVTLEPCSHY 82 (364) Q Consensus 6 ~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~~G~~HAE~~al~~~~---~~~~~atlyvtLEPC~h~ 82 (364) +|++||++|+++|+++.+.|.|||+||||||+||+|||+|+|...|.+|||++|+..|. ++++|+|||||||||+|. T Consensus 1 ~he~~M~~Al~~A~~~~~~~~~~~pVGaViV~~g~IIa~g~n~~~~~~hae~~ai~~a~~~~~~l~~~~lYvTlEPC~~~ 80 (147) T d2hxva2 1 MYETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYFGGPHAERMAIESARKKGEDLRGATLIVTLEPCDHH 80 (147) T ss_dssp HHHHHHHHHHHHHHTTTTTSTTSCCCEEEEEETTEEEEEEECCSTTSCCHHHHHHHHHHHTTCCCTTCEEEEEECCCCSC T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC T ss_conf 96999999999998605667999948999998994777611003688348999899999817887798885204555556 Q ss_pred CCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE-ECCCCHHHHHHHHHHHHCCCCC Q ss_conf 752105556530134324663010121101243311001898896-2221012320012222011342 Q gi|254780348|r 83 GRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGIIVD-RMMESEGKIFLHAYLTRQVEKR 149 (364) Q Consensus 83 GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI~V~-~~~~~~~~~ln~~f~~~~~~~r 149 (364) |+||||+.+|+++||+|||||+.|||+ ++|+|++.|+++||+|. |++++||.+|++.||++++++| T Consensus 81 ~~~p~C~~ai~~agi~rVv~g~~dp~~-~~~~~~~~l~~~~i~V~~gvl~~e~~~l~~~F~~~~~~kr 147 (147) T d2hxva2 81 GKTPPCTDLIIESGIKTVVIGTRDPNP-VSGNGVEKFRNHGIEVIEGVLEEEVKKLCEFFITYVTKKR 147 (147) T ss_dssp SSSCCHHHHHHHHTCCEEEEEECCCCG-GGCCHHHHHHTTTCEEEECTTHHHHHHHTHHHHHHHHHSS T ss_pred CCCHHHHHHHHHCCCCEEEEECCCCCC-CCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCC T ss_conf 997235577775386524564244654-1002335655599789938579999999999999998593 No 5 >d2b3za2 c.97.1.2 (A:1-145) Riboflavin biosynthesis protein RibD {Bacillus subtilis [TaxId: 1423]} Probab=100.00 E-value=4.3e-43 Score=308.04 Aligned_cols=144 Identities=40% Similarity=0.706 Sum_probs=140.1 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHCCHHCCCEEEEECCCCCCCCCC Q ss_conf 89999999999998708821888964799986998999984388769848999999730010698899905732115752 Q gi|254780348|r 6 FDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYGGCPHAEVQALEEAGEEARGATAYVTLEPCSHYGRS 85 (364) Q Consensus 6 ~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~~G~~HAE~~al~~~~~~~~~atlyvtLEPC~h~Gkt 85 (364) +|++||++|+++|+++.+.+.|||+||||||+||+||+.|+++..|.+|||.+|+..|..++.++|+|||||||+|+|+| T Consensus 1 ~De~fM~~Al~~A~~a~~~~~~~p~VGaViV~~g~ii~~g~n~~~~~~hae~~a~~~a~~~~~~~~lyvtlepc~~~~~~ 80 (145) T d2b3za2 1 MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYVTLEPCSHYGKT 80 (145) T ss_dssp CHHHHHHHHHHHHGGGTTSSTTSCCCEEEEESSSSEEEEEECCSTTSCCHHHHHHHHHGGGGTTCEEEESSCCCCCCSSS T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC T ss_conf 94999999999998614677999988999995572101222233577732657899989886334533345643456896 Q ss_pred CHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE-ECCCCHHHHHHHHHHHHCCCCC Q ss_conf 105556530134324663010121101243311001898896-2221012320012222011342 Q gi|254780348|r 86 PPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGIIVD-RMMESEGKIFLHAYLTRQVEKR 149 (364) Q Consensus 86 ppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI~V~-~~~~~~~~~ln~~f~~~~~~~r 149 (364) |+|+.+|+++||+|||||+.||++.+.|+|+++|+++||+|. |++++||.+|++.||++.+++. T Consensus 81 ~mC~~aIi~agI~rVvyg~~d~~~~~~g~~~~~l~~~gieV~~gvl~~e~~~ll~~Ff~~~r~gl 145 (145) T d2b3za2 81 PPCAELIINSGIKRVFVAMRDPNPLVAGRGISMMKEAGIEVREGILADQAERLNEKFLHFMRTGL 145 (145) T ss_dssp CCHHHHHHHHTCCEEEESSCCSCTTTTTHHHHHHHTTTCEEEECTTHHHHHHHTHHHHHHHHHSS T ss_pred CHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCC T ss_conf 20889999828995775133467655573889998099989808479999999999999986198 No 6 >d1z3aa1 c.97.1.2 (A:13-168) tRNA adenosine deaminase TadA {Escherichia coli [TaxId: 562]} Probab=100.00 E-value=1.7e-34 Score=249.95 Aligned_cols=138 Identities=28% Similarity=0.413 Sum_probs=124.4 Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCCC----CCHHHHHHHHHHCC-----HHCCCEEEE Q ss_conf 778999999999999870882188896479998699899998438876----98489999997300-----106988999 Q gi|254780348|r 4 SSFDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYGG----CPHAEVQALEEAGE-----EARGATAYV 74 (364) Q Consensus 4 ~~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~~G----~~HAE~~al~~~~~-----~~~~atlyv 74 (364) .-.|++||++|+++|+++ .+.|||+||||||+||+|||+|++...| ..|||++|++++.. ...++++|+ T Consensus 4 ~~~~e~~M~~Ai~~A~~a--~~~~~~pvGaViv~~g~Iia~g~n~~~~~~~~~~HAE~~ai~~a~~~~~~~~l~~~~lyt 81 (156) T d1z3aa1 4 EFSHEYWMRHALTLAKRA--WDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYV 81 (156) T ss_dssp TTSHHHHHHHHHHHHHHH--HHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTCEEEE T ss_pred CCCHHHHHHHHHHHHHHH--CCCCCCCEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEE T ss_conf 558999999999999985--458989899999989908999601114557540567777677777531365545744640 Q ss_pred ECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCC----CEEE-ECCCCHHHHHHHHHHHHCCCCC Q ss_conf 0573211575210555653013432466301012110124331100189----8896-2221012320012222011342 Q gi|254780348|r 75 TLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKG----IIVD-RMMESEGKIFLHAYLTRQVEKR 149 (364) Q Consensus 75 tLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~G----I~V~-~~~~~~~~~ln~~f~~~~~~~r 149 (364) ||||| |+|+.+|+++||+|||||+.||++.+.|+|+..|+++| |+|. |++++||..|++.||+.+++++ T Consensus 82 T~ePC------~mC~~aii~~gI~rVvyg~~d~~~~~~g~~~~~l~~~~~~~~ieV~~gvl~ee~~~ll~~Ff~~~r~~~ 155 (156) T d1z3aa1 82 TLEPC------VMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRRQEI 155 (156) T ss_dssp EECCC------HHHHHHHHHHTCSEEEEEECCTTTCTBTTSCBCTTCTTCSSCCEEECCTTHHHHHHHHHHHHHHHHTTC T ss_pred CCCCC------CCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCC T ss_conf 25665------432658987377657997523887655718899871788999689908589999999999999998574 No 7 >d2b3ja1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Staphylococcus aureus [TaxId: 1280]} Probab=100.00 E-value=4.5e-34 Score=247.16 Aligned_cols=135 Identities=32% Similarity=0.437 Sum_probs=121.1 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCC----CCCCHHHHHHHHHHCC-----HHCCCEEEEE Q ss_conf 789999999999998708821888964799986998999984388----7698489999997300-----1069889990 Q gi|254780348|r 5 SFDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAY----GGCPHAEVQALEEAGE-----EARGATAYVT 75 (364) Q Consensus 5 ~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~----~G~~HAE~~al~~~~~-----~~~~atlyvt 75 (364) .+|++||++||++|+++ ...|||+||||||++|++|+.|+++. .+..|||++|++++.. ...++|+|+| T Consensus 2 ~~D~~fM~~Ai~~A~~a--~~~g~~PVGaViV~~~~ii~~g~~~~~~~~~~~~HAe~~a~~~~~~~~~~~~~~~~~ly~t 79 (151) T d2b3ja1 2 TNDIYFMTLAIEEAKKA--AQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVT 79 (151) T ss_dssp HHHHHHHHHHHHHHHHH--HHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTEEEEEE T ss_pred CCHHHHHHHHHHHHHHH--CCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE T ss_conf 61899999999999984--5369898999997366410133100013676110025666479999728877778768874 Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC----EEE-ECCCCHHHHHHHHHHHHCCC Q ss_conf 5732115752105556530134324663010121101243311001898----896-22210123200122220113 Q gi|254780348|r 76 LEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGI----IVD-RMMESEGKIFLHAYLTRQVE 147 (364) Q Consensus 76 LEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI----~V~-~~~~~~~~~ln~~f~~~~~~ 147 (364) ||||. +|+.+|+++||+|||||+.|||+.+.|+|++.|+++|| +|. |++++||.+|++.||...+. T Consensus 80 ~ePC~------mC~~aii~~gI~~Vv~g~~d~~~~~~g~~~~~l~~~~i~~~~~v~~Gvl~~e~~~L~~~Ff~~~r~ 150 (151) T d2b3ja1 80 LEPCV------MCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRA 150 (151) T ss_dssp ECCCH------HHHHHHHHTTCSEEEEEECCTTTCTBTTSCBTTSCTTSSCCCEEECCTTHHHHHHHHHHHHHHHHH T ss_pred CCCHH------HHHCHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHC T ss_conf 36435------331206651355689974069987467654456645789998797691899999999999999858 No 8 >d1wwra1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Aquifex aeolicus [TaxId: 63363]} Probab=100.00 E-value=8.5e-34 Score=245.32 Aligned_cols=133 Identities=23% Similarity=0.333 Sum_probs=117.8 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCC----CCCCHHHHHHHHHHCCH-----HCCCEEEEEC Q ss_conf 89999999999998708821888964799986998999984388----76984899999973001-----0698899905 Q gi|254780348|r 6 FDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAY----GGCPHAEVQALEEAGEE-----ARGATAYVTL 76 (364) Q Consensus 6 ~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~----~G~~HAE~~al~~~~~~-----~~~atlyvtL 76 (364) .|++||++|+++|+++. ..++|+||||||++|+||+.|++.. .+.+|||++|+++|..+ +.|+|+|||| T Consensus 2 ~~e~fM~~Ai~~A~~a~--~~~~~pVGaVIV~~~~ii~~g~n~~~~~~~~~~HAE~~ai~~a~~~~~~~~l~~~tlY~Tl 79 (151) T d1wwra1 2 GKEYFLKVALREAKRAF--EKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRLNTKYLEGCELYVTL 79 (151) T ss_dssp SHHHHHHHHHHHHHHHH--HTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTCSCCTTEEEEESS T ss_pred CHHHHHHHHHHHHHHHH--HCCCCCEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECC T ss_conf 88999999999999875--2699999999997995666303322246750113899999999875385655786765002 Q ss_pred CCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC----CCEEEECCCCHHHHHHHHHHHHCC Q ss_conf 7321157521055565301343246630101211012433110018----988962221012320012222011 Q gi|254780348|r 77 EPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQK----GIIVDRMMESEGKIFLHAYLTRQV 146 (364) Q Consensus 77 EPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~----GI~V~~~~~~~~~~ln~~f~~~~~ 146 (364) |||.| |+.+|+++||+|||||+.||++.+.|++++.|+++ +++|.++..+||.+|++.||...+ T Consensus 80 EPC~m------C~~ai~~~~I~rVvyg~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ee~~~Ll~~Ff~~~R 147 (151) T d1wwra1 80 EPCIM------CSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLNHRVKWEYYPLEEASELLSEFFKKLR 147 (151) T ss_dssp CCBHH------HHHHHHHTTCSEEEESSCCTTTBTTTTSCCGGGCTTCSSCCEEEECCCHHHHHHHHHHHHHHH T ss_pred CCCCH------HHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHH T ss_conf 68827------888999855885899845699875343888876421589988996039999999999999972 No 9 >d1p6oa_ c.97.1.2 (A:) Cytosine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=99.97 E-value=8.8e-31 Score=224.97 Aligned_cols=131 Identities=27% Similarity=0.434 Sum_probs=115.2 Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE--ECCEEEEEEECCC----CCCCHHHHHHHHHHCC----HHCCCEE Q ss_conf 8778999999999999870882188896479998--6998999984388----7698489999997300----1069889 Q gi|254780348|r 3 VSSFDARFMSAALRFSRWHVGLTSTNPSVACLIV--KDGIVIGRGVTAY----GGCPHAEVQALEEAGE----EARGATA 72 (364) Q Consensus 3 ~~~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv--~~g~ii~~g~~~~----~G~~HAE~~al~~~~~----~~~~atl 72 (364) .|..|++||+.|+++|+++ ...++++|||||| ++|+||++||+.. .+.+|||++||++|.. .++|+|| T Consensus 5 ~~~~D~~~M~~A~~~A~~a--~~~g~~PvGaviV~~~~g~Iia~g~N~~~~~~~~~~HAE~~Ai~~a~~~~~~~l~~~tl 82 (156) T d1p6oa_ 5 ASKWDQKGMDIAYEEAALG--YKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTLENCGRLEGKVYKDTTL 82 (156) T ss_dssp CCTTHHHHHHHHHHHHHHH--HHTTSCCCEEEEEETTTCCEEEEEECCHHHHTCSSCCHHHHHHHHHCSCCHHHHTTEEE T ss_pred CCHHHHHHHHHHHHHHHHH--HHCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEE T ss_conf 7299999999999999988--77699988999999179989999705665456654332889998873036543223378 Q ss_pred EEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH Q ss_conf 990573211575210555653013432466301012110124331100189889622210123200122220 Q gi|254780348|r 73 YVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGIIVDRMMESEGKIFLHAYLTR 144 (364) Q Consensus 73 yvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI~V~~~~~~~~~~ln~~f~~~ 144 (364) ||||||| |+|+.+|+++||+|||||..| ...|+|.+.|+.+|++|.++++++|.+|++.||.. T Consensus 83 yvTlEPC------~mC~~ai~~~gI~rVv~G~~~---~~~~~g~~~L~~~~~~v~~v~~~ec~~Ll~~Ff~~ 145 (156) T d1p6oa_ 83 YTTLSPC------DMCTGAIIMYGIPRCVVGENV---NFKSKGEKYLQTRGHEVVVVDDERCKKIMKQFIDE 145 (156) T ss_dssp EEEECCC------HHHHHHHHHHTCCEEEEEESS---SCCCTHHHHHHHTTCEEEECCCHHHHHHHHHHHHH T ss_pred EEECCCC------HHHHHHHHHHCCCEEEECCCC---CCCCCHHHHHHCCCEEEEEECHHHHHHHHHHHHHH T ss_conf 8505687------789999998099989991799---98865589861488278545799999999999997 No 10 >d1wkqa_ c.97.1.2 (A:) Guanine deaminase GuaD {Bacillus subtilis [TaxId: 1423]} Probab=99.97 E-value=1.7e-30 Score=223.00 Aligned_cols=138 Identities=22% Similarity=0.296 Sum_probs=114.4 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCC----CCCHHHHHHHHHHCC-----HHCCCEEEEEC Q ss_conf 899999999999987088218889647999869989999843887----698489999997300-----10698899905 Q gi|254780348|r 6 FDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYG----GCPHAEVQALEEAGE-----EARGATAYVTL 76 (364) Q Consensus 6 ~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~~----G~~HAE~~al~~~~~-----~~~~atlyvtL 76 (364) .|+.||++|+++|+++.....++| ||||||+||+||++|++... ...|||++||++|.. ++.|+|||||| T Consensus 4 ~~~~~M~~Ai~~A~~~~~~g~~~P-vGaviv~~~~ii~~g~n~~~~~~~~t~HAE~~ai~~a~~~~~~~~l~~~tlyvTl 82 (158) T d1wkqa_ 4 NHETFLKRAVTLACEGVNAGIGGP-FGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTSC 82 (158) T ss_dssp CHHHHHHHHHHHHHHHHHTTSSSS-CEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSSCTTEEEEEEE T ss_pred CHHHHHHHHHHHHHHHHHCCCCCC-EEEEEEECCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEC T ss_conf 889999999999998644689998-8999995661014303302046777621789999999874276414797899974 Q ss_pred CCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC--------CCCCCCCEEEECCCCHHHHHHHHHHHHCCCC Q ss_conf 73211575210555653013432466301012110124331--------1001898896222101232001222201134 Q gi|254780348|r 77 EPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQ--------WLSQKGIIVDRMMESEGKIFLHAYLTRQVEK 148 (364) Q Consensus 77 EPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~--------~L~~~GI~V~~~~~~~~~~ln~~f~~~~~~~ 148 (364) ||| |+|+.+|+++||+|||||+.||++...|.+.. .+.+.++.|.+++.+|+..+.+.| .+..++ T Consensus 83 EPC------~mC~~ai~~agi~~Vvy~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~e~~~~f~~~-~~~~~k 155 (158) T d1wkqa_ 83 EPC------PMCLGAIYWARPKAVFYAAEHTDAAEAGFDDSFIYKEIDKPAEERTIPFYQVTLTEHLSPFQAW-RNFANK 155 (158) T ss_dssp CCC------HHHHHHHHHHCCSEEEEEECHHHHHHTTCSHHHHHHHHTSCGGGSSSCEEECCCTTTTHHHHHH-HHCTTC T ss_pred CCC------HHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCEEHHHHHHHHHHHHHH-HHHHCC T ss_conf 777------6579999963579899987589853367606776888836866266127317789997999999-886179 Q ss_pred CCH Q ss_conf 222 Q gi|254780348|r 149 RSH 151 (364) Q Consensus 149 rP~ 151 (364) ||| T Consensus 156 ~~Y 158 (158) T d1wkqa_ 156 KEY 158 (158) T ss_dssp CCC T ss_pred CCC T ss_conf 989 No 11 >d1vq2a_ c.97.1.2 (A:) Deoxycytidylate deaminase {Bacteriophage T4 [TaxId: 10665]} Probab=99.95 E-value=1.3e-27 Score=203.69 Aligned_cols=128 Identities=27% Similarity=0.350 Sum_probs=110.6 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCC-C---------------------------------- Q ss_conf 99999999999987088218889647999869989999843887-6---------------------------------- Q gi|254780348|r 7 DARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYG-G---------------------------------- 51 (364) Q Consensus 7 d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~~-G---------------------------------- 51 (364) .+.||+.|+..|++. +-|+..||||||+||+|||+||+..+ | T Consensus 3 ~~~~M~~A~~~A~rS---~c~~~~VGAVIV~~~~IIs~G~Ng~p~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (193) T d1vq2a_ 3 ASTVLQIAYLVSQES---KCCSWKVGAVIEKNGRIISTGYNGSPAGGVNCCDYAAEQGWLLNKPKHAIIQGHKPECVSFG 79 (193) T ss_dssp HHHHHHHHHHHHTTC---CCSSBCCEEEEEETTEEEEEEECBCCTTSCCHHHHHHHHTCEEEC----------------- T ss_pred HHHHHHHHHHHHHHC---CCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCC T ss_conf 899999999999768---99899868999989989998606886788765420244321103310011101222112232 Q ss_pred ----------------------CCHHHHHHHHHHC---CHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCC Q ss_conf ----------------------9848999999730---010698899905732115752105556530134324663010 Q gi|254780348|r 52 ----------------------CPHAEVQALEEAG---EEARGATAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDD 106 (364) Q Consensus 52 ----------------------~~HAE~~al~~~~---~~~~~atlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~D 106 (364) ..|||++||.+|. ....|+|||||+||| ++|+.+|+++||+||||+..| T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~HAE~nai~~a~~~~~~~~~~~ly~t~~PC------~~Ca~~i~~~gI~~V~~~~~~ 153 (193) T d1vq2a_ 80 STDRFVLAKEHRSAHSEWSSKNEIHAELNAILFAAENGSSIEGATMYVTLSPC------PDCAKAIAQSGIKKLVYCETY 153 (193) T ss_dssp ---CEEECGGGHHHHHHHHHHHCBCHHHHHHHHHHHHTCCCTTCEEEEEECCC------HHHHHHHHHHTCCEEEEEECC T ss_pred CCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCC------HHHHHHHHHCCCCEEEEEECC T ss_conf 21100000013443211257898689999999877607787775477258996------789999985157889997279 Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHC Q ss_conf 121101243311001898896222101232001222201 Q gi|254780348|r 107 PDVRVSGRGLQWLSQKGIIVDRMMESEGKIFLHAYLTRQ 145 (364) Q Consensus 107 Pnp~v~gkGi~~L~~~GI~V~~~~~~~~~~ln~~f~~~~ 145 (364) |+. .++|+++|+++||+|..+.++++.++|..||... T Consensus 154 ~~~--~~~~~~~l~~~gI~v~~i~~~~~~~l~~~~~~~~ 190 (193) T d1vq2a_ 154 DKN--KPGWDDILRNAGIEVFNVPKKNLNKLNWENINEF 190 (193) T ss_dssp TTC--CTTTTHHHHHTTCEEEECCGGGCCSSCGGGCCCB T ss_pred CCC--CHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHH T ss_conf 985--4789999998799899539999999989999998 No 12 >d2a8na1 c.97.1.2 (A:2-131) Cytidine and deoxycytidylate deaminase CodA {Agrobacterium tumefaciens [TaxId: 358]} Probab=99.94 E-value=7.3e-27 Score=198.51 Aligned_cols=115 Identities=32% Similarity=0.393 Sum_probs=102.7 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCC----CCCCHHHHHHHHHHCC-----HHCCCEEEEE Q ss_conf 789999999999998708821888964799986998999984388----7698489999997300-----1069889990 Q gi|254780348|r 5 SFDARFMSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAY----GGCPHAEVQALEEAGE-----EARGATAYVT 75 (364) Q Consensus 5 ~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~----~G~~HAE~~al~~~~~-----~~~~atlyvt 75 (364) +.|++||+.||++|+++ ....+++||||||+||+||+.|++.. .+..|||++|+++|.+ ...|+||||| T Consensus 1 a~~~~fM~~Al~~A~~a--~~~~~~PVGavIV~~~~ii~~g~n~~~~~~~~~~HaE~~ai~~a~~~~~~~~l~~~tly~T 78 (130) T d2a8na1 1 AERTHFMELALVEARSA--GERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIRMACEALGQERLPGADLYVT 78 (130) T ss_dssp CCHHHHHHHHHHHHHHH--HHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTCSCCTTCEEEEE T ss_pred CCHHHHHHHHHHHHHHH--HCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECC T ss_conf 95799999999999986--2359997999999899199862331012466521059899999999838767889788225 Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC----EEE Q ss_conf 5732115752105556530134324663010121101243311001898----896 Q gi|254780348|r 76 LEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGI----IVD 127 (364) Q Consensus 76 LEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI----~V~ 127 (364) |||| |.|+.+|+.+||+|||||+.||++.+.|.++++|++.++ +|. T Consensus 79 ~EPC------~mC~~ai~~~gI~rVvyg~~d~~~g~~gs~~~l~~~~~lnh~~eV~ 128 (130) T d2a8na1 79 LEPC------TMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQPTCHHAPDVY 128 (130) T ss_dssp ECCB------HHHHHHHHHTTCSEEEEEECCTTTBCSSSTTCGGGSTTCCCCCEEE T ss_pred CCCC------HHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEE T ss_conf 6668------7899999985569799997389998756420341077889984887 No 13 >d2g84a1 c.97.1.2 (A:1-189) Putative deaminase NE0047 {Nitrosomonas europaea [TaxId: 915]} Probab=99.93 E-value=2.6e-26 Score=194.82 Aligned_cols=132 Identities=24% Similarity=0.397 Sum_probs=108.4 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE--CCEEEEEEECCC--CCCC--HHHHHHHHHHCCH----------HC Q ss_conf 789999999999998708821888964799986--998999984388--7698--4899999973001----------06 Q gi|254780348|r 5 SFDARFMSAALRFSRWHVGLTSTNPSVACLIVK--DGIVIGRGVTAY--GGCP--HAEVQALEEAGEE----------AR 68 (364) Q Consensus 5 ~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv~--~g~ii~~g~~~~--~G~~--HAE~~al~~~~~~----------~~ 68 (364) ..++.+|++||++|+++. ..-+.+||||||+ +|+||++|+... .+.| |||++||++|..+ .. T Consensus 24 ~~~e~~M~~ai~lAr~a~--~~g~~P~GaviV~~~~g~Iia~g~N~~~~~~dpt~HAEi~AI~~A~~~~~~~~l~~~~l~ 101 (189) T d2g84a1 24 AAPEARMGYVLELVRANI--AADGGPFAAAVFERDSGLLIAAGTNRVVPGRCSAAHAEILALSLAQAKLDTHDLSADGLP 101 (189) T ss_dssp CSHHHHHHHHHHHHHHHH--HTTCCSCEEEEEETTTCBEEEEEECCTTTTTCTTCCHHHHHHHHHHHHHTCSCTTCTTSC T ss_pred CCHHHHHHHHHHHHHHHH--HCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC T ss_conf 885999999999999998--769998899999789998999870876768998634999999999998630111221236 Q ss_pred CCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCC--------CCCCCCCCCCCEEE-ECCCCHHHHHHH Q ss_conf 988999057321157521055565301343246630101211012--------43311001898896-222101232001 Q gi|254780348|r 69 GATAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSG--------RGLQWLSQKGIIVD-RMMESEGKIFLH 139 (364) Q Consensus 69 ~atlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~g--------kGi~~L~~~GI~V~-~~~~~~~~~ln~ 139 (364) ++||||||||| |.|+.+|+++||+|||||+.||+....| .....+.+++|+|. +++++||.+|++ T Consensus 102 ~~tlY~TlEPC------~MC~~Ai~~a~I~rVvyga~~~d~~~~g~~~~~~~~~~~~~~~~~~ieV~~gvl~dE~~~Llk 175 (189) T d2g84a1 102 ACELVTSAEPC------VMCFGAVIWSGVRSLVCAARSDDVEAIGFDEGPRPENWMGGLEARGITVTTGLLRDAACALLR 175 (189) T ss_dssp CEEEEEEECCC------HHHHHHHHHHCCSEEEEEECHHHHHHTTCCCCCCCTTHHHHHHHTTCEEECCTTHHHHHHHHH T ss_pred CCEEEECCCCC------HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHH T ss_conf 85788205777------178778888517989998618985446765430067776788759998987876999999999 Q ss_pred HHHHH Q ss_conf 22220 Q gi|254780348|r 140 AYLTR 144 (364) Q Consensus 140 ~f~~~ 144 (364) .|+-. T Consensus 176 ~f~~~ 180 (189) T d2g84a1 176 EYNAC 180 (189) T ss_dssp HHHHH T ss_pred HHHHC T ss_conf 99980 No 14 >d1d1ga_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Thermotoga maritima [TaxId: 2336]} Probab=99.81 E-value=3.9e-19 Score=146.38 Aligned_cols=159 Identities=18% Similarity=0.251 Sum_probs=115.9 Q ss_pred HHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCC-CCCCCCCCCCCCCCCEEEEECCCCCC Q ss_conf 01101027877202113653222210135666764201440366312201345-42354434444344215764466899 Q gi|254780348|r 152 ITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADD-PELTCRLNGLQEHSPMRIILDPHFKL 230 (364) Q Consensus 152 V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~Dn-P~Lt~R~~~~~~~~P~riVld~~l~i 230 (364) |++.+|||+||+||..++ .| ++++.+.+.+++++.+|+|++|.+|..... | + ..-..+|++++... T Consensus 3 ii~~~A~sldG~Ia~~~~--~w-~~~~D~~~f~~~~~~~~~vimGr~T~e~~~~p-----l-----~~r~~iv~s~~~~~ 69 (164) T d1d1ga_ 3 VIFVLAMDVSGKIASSVE--SW-SSFEDRKNFRKITTEIGNVVMGRITFEEIGRP-----L-----PERLNVVLTRRPKT 69 (164) T ss_dssp EEEEEEECTTSEEECSST--TC-SCHHHHHHHHHHHHHHTEEEEEHHHHHHHCSC-----C-----TTSEEEEECSSCCC T ss_pred EEEEEEECCCCCEECCCC--CC-CCHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-----C-----CCCCEEEEEECCCC T ss_conf 999999758886728997--98-89889999999971799799936421235776-----5-----57704887301110 Q ss_pred CHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCE Q ss_conf 80221003444670798546554210110022322222333222788999986079969998123899999997889889 Q gi|254780348|r 231 SLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRLVDS 310 (364) Q Consensus 231 ~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~LvDE 310 (364) ..+ ....+ -..++.++++.|.+.+.++++|+||+++.++||+++|+|| T Consensus 70 ~~~---------~~~~~-----------------------~~~~~~~~~~~l~~~~~~~i~v~GG~~l~~~~l~~~liDe 117 (164) T d1d1ga_ 70 SNN---------PSLVF-----------------------FNGSPADVVKFLEGKGYERVAVIGGKTVFTEFLREKLVDE 117 (164) T ss_dssp CSC---------TTEEE-----------------------ECCCHHHHHHHHHTTTCSEEEEEECHHHHHHHHHTTCCSE T ss_pred CCC---------CCEEE-----------------------ECCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCE T ss_conf 125---------74478-----------------------5279999999987569983699864488999864888677 Q ss_pred EEEEEECEEECCCCCCCCCCCCCCCCCCEEEEEEEECCC--EEEEEEEC Q ss_conf 999960743268875233345454446405446886793--69999507 Q gi|254780348|r 311 IILYRSQIVIGEGGIPSPLEEGYLEKNFMCVRRDYFGSD--VCLEYIGK 357 (364) Q Consensus 311 l~ifiaP~ilG~~g~~s~~~~~~~~~~~~l~~~~~ig~D--v~~~y~~k 357 (364) +++++.|.++|+ |.+.+ ........+++.+.+.++++ +.++|..| T Consensus 118 i~lt~~p~~~g~-G~~lf-~~~~~~~~l~l~~~~~~~~~g~v~l~Y~v~ 164 (164) T d1d1ga_ 118 LFVTVEPYVFGK-GIPFF-DEFEGYFPLKLLEMRRLNERGTLFLKYSVE 164 (164) T ss_dssp EEEEECSEEESS-CEESS-CCCSCEEEEEEEEEEECSTTCCEEEEEEEC T ss_pred EEEEEEEEECCC-CCCCC-CCCCCCCCEEEEEEEEECCCCEEEEEEEEC T ss_conf 999992275388-88878-998877743998999948999899999979 No 15 >d1seja1 c.71.1.1 (A:3-180) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain {Cryptosporidium hominis [TaxId: 237895]} Probab=98.42 E-value=2.3e-06 Score=60.23 Aligned_cols=158 Identities=15% Similarity=0.160 Sum_probs=89.1 Q ss_pred HHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH------CCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCE--EEEE Q ss_conf 110102787720211365322221013566676420------14403663122013454235443444434421--5764 Q gi|254780348|r 153 TLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRA------QSDAILVGIGTVLADDPELTCRLNGLQEHSPM--RIIL 224 (364) Q Consensus 153 ~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa------~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~--riVl 224 (364) ++-.|++.+|-|+. +|+--| .-++..++..++-. .-++|++|.+|... |-.| .-|- -||+ T Consensus 6 ~~vaa~~~~~~IG~-~~~lPW-~~~~Dl~~Fk~~T~~~~~~~~~~~vIMGrkT~es----l~~~------pl~~r~~iVl 73 (178) T d1seja1 6 IVVAASVLSSGIGI-NGQLPW-SISEDLKFFSKITNNKCDSNKKNALIMGRKTWDS----IGRR------PLKNRIIVVI 73 (178) T ss_dssp EEEEEETTTCEEEB-TTBCSS-CCHHHHHHHHHHHHCCSCTTSEEEEEEEHHHHHH----TTSC------CCTTEEEEEE T ss_pred EEEEEECCCCCEEC-CCCCCC-CCHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHC----CCCC------CCCCCEEEEE T ss_conf 99999748981957-997474-2789999999985799876773079994131011----2531------3577349998 Q ss_pred CCCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHC-CCCEEEECCHHHHHHHHH Q ss_conf 4668998022100344467079854655421011002232222233322278899998607-996999812389999999 Q gi|254780348|r 225 DPHFKLSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGR-GVTSLLVEGGAAVAHSFI 303 (364) Q Consensus 225 d~~l~i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~~-gi~~iLVEGG~~l~~sfl 303 (364) +++..... ....+++ ..++++.++.+.+. +.+.|+|-||+.+...|| T Consensus 74 S~~~~~~~--------~~~~~~v------------------------~~s~~~~l~~~~~~~~~~~i~IiGG~~IY~~~l 121 (178) T d1seja1 74 SSSLPQDE--------ADPNVVV------------------------FRNLEDSIENLMNDDSIENIFVCGGESIYRDAL 121 (178) T ss_dssp CSSSCCCS--------SCTTEEE------------------------ESSHHHHTTSTTSCTTEEEEEECCCHHHHHHHH T ss_pred CCCCCCCC--------CCCEEEE------------------------CCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHH T ss_conf 35765333--------5550453------------------------214999988765025876499971279999974 Q ss_pred HCCCCCEEEEEEECE-EECCCCCCCCCCCCCCCCCCEEEEEEEE-CCCE---EEEEEECC Q ss_conf 788988999996074-3268875233345454446405446886-7936---99995074 Q gi|254780348|r 304 NSRLVDSIILYRSQI-VIGEGGIPSPLEEGYLEKNFMCVRRDYF-GSDV---CLEYIGKN 358 (364) Q Consensus 304 ~~~LvDEl~ifiaP~-ilG~~g~~s~~~~~~~~~~~~l~~~~~i-g~Dv---~~~y~~k~ 358 (364) ..+++||++++.-+. ...++. -+| .. ....+...+.+.. .+++ +.+|.|++ T Consensus 122 ~~~~~d~i~lT~I~~~~~~gD~-~FP--~i-~~~~~~~~~~~~~~~~~~~y~F~vy~rk~ 177 (178) T d1seja1 122 KDNFVDRIYLTRVALEDIEFDT-YFP--EI-PETFLPVYMSQTFCTKNISYDFMIFEKQE 177 (178) T ss_dssp HTTCCSEEEEEEECCCSSCCSE-ECC--CC-CTTCEEEEECCCEEETTEEEEEEEEECCC T ss_pred HCCCCCEEEEEEEEEECCCCCE-ECC--CC-CHHHEEEEEEEEECCCCCCEEEEEEEEEE T ss_conf 2341478999998224267876-999--89-84683888887353689956999999975 No 16 >d1vdra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Haloferax volcanii [TaxId: 2246]} Probab=98.38 E-value=2.8e-06 Score=59.59 Aligned_cols=154 Identities=16% Similarity=0.141 Sum_probs=96.9 Q ss_pred HHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCH Q ss_conf 11010278772021136532222101356667642014403663122013454235443444434421576446689980 Q gi|254780348|r 153 TLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQEHSPMRIILDPHFKLSL 232 (364) Q Consensus 153 ~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~riVld~~l~i~~ 232 (364) ++=.|++.||-|+ .+|+--|-.-++..++..++ ..-.++++|.+|... |.-. +.++ ..||++++.. T Consensus 3 ~~I~A~~~n~~IG-~~~~lPW~~~~~Dl~~F~~~-T~~~~vIMGrkT~es----l~~~---l~~R--~~iV~s~~~~--- 68 (157) T d1vdra_ 3 VSVAALAENRVIG-RDGELPWPSIPADKKQYRSR-IADDPVVLGRTTFES----MRDD---LPGS--AQIVMSRSER--- 68 (157) T ss_dssp EEEEEEEETSEEE-BTTBCSSCCCHHHHHHHHHH-TSSSCEEEEHHHHHH----TTTS---CCSS--SEEEECSSCC--- T ss_pred EEEEEECCCCCEE-CCCCCCCCCCHHHHHHHHHC-CCCCEEEEECCCCEE----CCCC---CCCC--CEEEEEECCC--- T ss_conf 9999998999380-79928774588899998861-799769998330001----6535---6675--1266410122--- Q ss_pred HHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEE Q ss_conf 22100344467079854655421011002232222233322278899998607996999812389999999788988999 Q gi|254780348|r 233 DSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRLVDSII 312 (364) Q Consensus 233 ~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~LvDEl~ 312 (364) . ....++.+ ..+++++++.+.+.+.+.|+|-||+.+...|+ .++||++ T Consensus 69 ---------------------~-----~~~~~~~~----~~s~~~a~~~~~~~~~~~i~IiGG~~iy~~~l--~~~d~i~ 116 (157) T d1vdra_ 69 ---------------------S-----FSVDTAHR----AASVEEAVDIAASLDAETAYVIGGAAIYALFQ--PHLDRMV 116 (157) T ss_dssp ---------------------C-----CCSSSCCE----ESSHHHHHHHHHHTTCSCEEEEECHHHHHHHG--GGCSEEE T ss_pred ---------------------C-----CCCCCEEE----EEEHHHHHHHHHCCCCCEEEEEECHHHHHHHC--CCCCEEE T ss_conf ---------------------0-----02697699----70299999997517984699993637865311--3179999 Q ss_pred EEEECEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEE Q ss_conf 99607432688752333454544464054468867936999950 Q gi|254780348|r 313 LYRSQIVIGEGGIPSPLEEGYLEKNFMCVRRDYFGSDVCLEYIG 356 (364) Q Consensus 313 ifiaP~ilG~~g~~s~~~~~~~~~~~~l~~~~~ig~Dv~~~y~~ 356 (364) +++-+....++ .-.| . ....+|++.+.....+=.+.+|.| T Consensus 117 lT~I~~~~~gD-~~FP--~-~d~~~w~~~~~~~~~~f~~~~y~R 156 (157) T d1vdra_ 117 LSRVPGEYEGD-TYYP--E-WDAAEWELDAETDHEGFTLQEWVR 156 (157) T ss_dssp EEEEEEECCCS-EECC--C-CCTTTEEEEEEEECSSCEEEEEEE T ss_pred EEEECCCCCCC-EECC--C-CCHHHCEEEEEEECCCEEEEEEEE T ss_conf 99857864688-8888--8-876888999997069989999993 No 17 >d1j3ka_ c.71.1.1 (A:) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Probab=98.35 E-value=1.5e-05 Score=54.75 Aligned_cols=82 Identities=16% Similarity=0.250 Sum_probs=61.0 Q ss_pred CCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEEEEECEEECCCCCCCCCCCCCCCCCCEEEEEEEE--CCCE Q ss_conf 22788999986079969998123899999997889889999960743268875233345454446405446886--7936 Q gi|254780348|r 273 RDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRLVDSIILYRSQIVIGEGGIPSPLEEGYLEKNFMCVRRDYF--GSDV 350 (364) Q Consensus 273 ~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~LvDEl~ifiaP~ilG~~g~~s~~~~~~~~~~~~l~~~~~i--g~Dv 350 (364) .++++++..+.+.+...|+|-||+.+..+||+..++|++|++.-.....++. ++.. .....|++++.... .++. T Consensus 144 ~sl~~ai~~~~~~~~~~IfIIGG~~IY~~~L~~~~id~iylT~I~~~~e~Dt---fFP~-id~~~f~~~~~~~~~~e~~~ 219 (231) T d1j3ka_ 144 NKVEDLIVLLGKLNYYKCFILGGSVVYQEFLEKKLIKKIYFTRINSTYECDV---FFPE-INENEYQIISVSDVYTSNNT 219 (231) T ss_dssp SSHHHHHHHHHHSCCSCEEECCCHHHHHHHHHTTCCSEEEEEEEEEEECCSE---ECCC-CCTTTEEEEEECCCEEETTE T ss_pred HHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCEEEEEEECCCCCCCE---ECCC-CCHHHCEEEEEEECCCCCCC T ss_conf 0199999997514777369977689999998760378899987656406877---7787-88688999986500037997 Q ss_pred ---EEEEEECC Q ss_conf ---99995074 Q gi|254780348|r 351 ---CLEYIGKN 358 (364) Q Consensus 351 ---~~~y~~k~ 358 (364) +.+|.|++ T Consensus 220 ~y~F~~Y~rkn 230 (231) T d1j3ka_ 220 TLDFIIYKKTN 230 (231) T ss_dssp EEEEEEEEECC T ss_pred EEEEEEEEECC T ss_conf 04899999737 No 18 >d3dfra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Lactobacillus casei [TaxId: 1582]} Probab=98.34 E-value=7.8e-06 Score=56.63 Aligned_cols=151 Identities=13% Similarity=0.107 Sum_probs=98.1 Q ss_pred HHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCC--EEEEECCCCCCC Q ss_conf 101027877202113653222210135666764201440366312201345423544344443442--157644668998 Q gi|254780348|r 154 LKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQEHSP--MRIILDPHFKLS 231 (364) Q Consensus 154 lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P--~riVld~~l~i~ 231 (364) |=+|++.||-|+ .+|.--| ..++.+++-..+ ..-.+|++|.+|... | +. ...| ..||++++-.. T Consensus 3 lI~A~~~ng~IG-~~~~lpW-~~~~Dl~~F~~~-T~~~~vIMGrkT~es----l----p~--~pl~~R~~iVls~~~~~- 68 (162) T d3dfra_ 3 FLWAQNRNGLIG-KDGHLPW-HLPDDLHYFRAQ-TVGKIMVVGRRTYES----F----PK--RPLPERTNVVLTHQEDY- 68 (162) T ss_dssp EEEEECTTCEEE-BTTBCSS-CCHHHHHHHHHT-TTTSEEEEEHHHHHH----S----SS--SSCTTSEEEEECSCTTC- T ss_pred EEEEECCCCCEE-CCCCCCC-CCHHHHHHHHHH-HCCCEEEEECCCHHH----H----CC--CCCCCCEEEEECCCCCC- T ss_conf 899998999464-7997677-699999999997-279818994302121----0----34--35477247995155432- Q ss_pred HHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEE Q ss_conf 02210034446707985465542101100223222223332227889999860799699981238999999978898899 Q gi|254780348|r 232 LDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRLVDSI 311 (364) Q Consensus 232 ~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~LvDEl 311 (364) ...++.++ .++.+++..+.+...+.++|-||+.+..+|+. ++|++ T Consensus 69 -----------------------------~~~~~~~~----~s~~~~i~~~~~~~~~~i~IiGG~~Iy~~~l~--~~d~i 113 (162) T d3dfra_ 69 -----------------------------QAQGAVVV----HDVAAVFAYAKQHLDQELVIAGGAQIFTAFKD--DVDTL 113 (162) T ss_dssp -----------------------------CCTTSEEE----SSHHHHHHHHHHCCSSCEEECCCHHHHHHTGG--GCCEE T ss_pred -----------------------------CCCCCEEC----CHHHHHHHHHHHCCCCCEEECCHHHHHHHHHH--HCCEE T ss_conf -----------------------------23672401----02889999875325420234236789998775--47999 Q ss_pred EEEEECEEECCCCCCCCCCCCCCCCCCEEEEEEEECC---C---EEEEEEEC Q ss_conf 9996074326887523334545444640544688679---3---69999507 Q gi|254780348|r 312 ILYRSQIVIGEGGIPSPLEEGYLEKNFMCVRRDYFGS---D---VCLEYIGK 357 (364) Q Consensus 312 ~ifiaP~ilG~~g~~s~~~~~~~~~~~~l~~~~~ig~---D---v~~~y~~k 357 (364) +++.-+.-..++ ...| ......|..++.+.+.+ + .+.+|.|| T Consensus 114 ~lT~I~~~~~~D-~~fp---~~~~~~~~~v~~~~~~~~~~~i~y~f~~y~Rk 161 (162) T d3dfra_ 114 LVTRLAGSFEGD-TKMI---PLNWDDFTKVSSRTVEDTNPALTHTYEVWQKK 161 (162) T ss_dssp EEEEESSCCCCS-EECC---CCCGGGEEEEEEEEECCSSGGGCEEEEEEEEC T ss_pred EEEEECCCCCCC-EECC---CCCHHHCEEEEEEEECCCCCCCCEEEEEEEEE T ss_conf 999867731688-6768---78857979999887325679973799999971 No 19 >d2fzia1 c.71.1.1 (A:1-206) Dihydrofolate reductases, eukaryotic type {Fungus (Pneumocystis carinii) [TaxId: 4754]} Probab=98.30 E-value=1.1e-06 Score=62.34 Aligned_cols=133 Identities=17% Similarity=0.153 Sum_probs=82.6 Q ss_pred CCCHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH---------CCCCEEEEHHHHCCCCCCCCCCCCCCCCCC Q ss_conf 42220110102787720211365322221013566676420---------144036631220134542354434444344 Q gi|254780348|r 148 KRSHITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRA---------QSDAILVGIGTVLADDPELTCRLNGLQEHS 218 (364) Q Consensus 148 ~rP~V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa---------~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~ 218 (364) +.+-+.+=+|++.||-|+. +|+--| .-++..++...+-. .-++|++|.+|... =| .....- T Consensus 3 ~~~~i~lIvA~~~~~~IG~-~~~lPW-~~~~Dl~~Fk~~T~~~~~~~~~~~~n~VIMGRkT~eS-ip-------~~~~pL 72 (206) T d2fzia1 3 QQKSLTLIVALTTSYGIGR-SNSLPW-KLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWES-IP-------LQFRPL 72 (206) T ss_dssp SSSCEEEEEEEETTCEEES-SSSCSS-CCHHHHHHHHHHHHCCCTTGGGTEEEEEEEEHHHHHH-SC-------GGGCSC T ss_pred CCCEEEEEEEECCCCCEEC-CCCCCC-CCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHC-CC-------CCCCCC T ss_conf 8871899999889996707-991367-7989999999975689876654557189985445325-44-------335568 Q ss_pred CEE--EEECCCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHH-------CCCCE Q ss_conf 215--764466899802210034446707985465542101100223222223332227889999860-------79969 Q gi|254780348|r 219 PMR--IILDPHFKLSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVG-------RGVTS 289 (364) Q Consensus 219 P~r--iVld~~l~i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~-------~gi~~ 289 (364) |-| ||++++..... ..++.+ ..++.++++.+.+ .+++. T Consensus 73 p~R~niVlSr~~~~~~-----------------------------~~~~~~----~~s~~~al~~~~~~~~~~~~~~~~~ 119 (206) T d2fzia1 73 KGRINVVITRNESLDL-----------------------------GNGIHS----AKSLDHALELLYRTYGSESSVQINR 119 (206) T ss_dssp TTEEEEEECSCCSSCC-----------------------------CSSCEE----ESSHHHHHHHHHHHSCTTSSSEEEE T ss_pred CCCEEEEEECCCCCCC-----------------------------CCEEEE----ECCHHHHHHHHHHHHHHHHCCCCCE T ss_conf 9974899834888654-----------------------------524898----4258999999998766654047763 Q ss_pred EEECCHHHHHHHHHHCCCCCEEEEEEECEEECCC Q ss_conf 9981238999999978898899999607432688 Q gi|254780348|r 290 LLVEGGAAVAHSFINSRLVDSIILYRSQIVIGEG 323 (364) Q Consensus 290 iLVEGG~~l~~sfl~~~LvDEl~ifiaP~ilG~~ 323 (364) |+|-||+.+..+||+..++|+++++.-.....++ T Consensus 120 I~VIGG~~IY~~~L~~~~~d~i~lT~I~~~~~~D 153 (206) T d2fzia1 120 IFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCD 153 (206) T ss_dssp EEEEECHHHHHHHHHCTTEEEEEEEEEESCCCCS T ss_pred EEEECHHHHHHHHHCCCCCCEEEEEEECCCCCCC T ss_conf 8994528999998437300889999966512588 No 20 >d1kmva_ c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic type {Human (Homo sapiens) [TaxId: 9606]} Probab=98.17 E-value=1.2e-05 Score=55.27 Aligned_cols=159 Identities=14% Similarity=0.083 Sum_probs=91.7 Q ss_pred HHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH------CCCCEEEEHHHHCCCCCCCCCCCCCCCCCCC--EEEEEC Q ss_conf 10102787720211365322221013566676420------1440366312201345423544344443442--157644 Q gi|254780348|r 154 LKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRA------QSDAILVGIGTVLADDPELTCRLNGLQEHSP--MRIILD 225 (364) Q Consensus 154 lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa------~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P--~riVld 225 (364) +=+|++-+|-|.. +|+--|-.-++..++...+-. ..++|++|.+|... =|.. ...-| .-||++ T Consensus 6 ~IvA~~~n~~IG~-~g~LPW~~~~~D~~~Fk~~T~~~~~~~~~~~vIMGrkT~eS-lp~~-------~~pLp~R~niVlS 76 (186) T d1kmva_ 6 CIVAVSQNMGIGK-NGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFS-IPEK-------NRPLKGRINLVLS 76 (186) T ss_dssp EEEEECTTCEEEB-TTBCSSCCCHHHHHHHHHHHHCCSSTTCEEEEEEEHHHHHH-SCGG-------GCSCTTSEEEEEC T ss_pred EEEEECCCCCCCC-CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC-CCCC-------CCCCCCCEEEEEE T ss_conf 9999889996618-99487877989999999986799887873389996430025-2224-------7646883699983 Q ss_pred CCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHH----CCCCEEEECCHHHHHHH Q ss_conf 66899802210034446707985465542101100223222223332227889999860----79969998123899999 Q gi|254780348|r 226 PHFKLSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVG----RGVTSLLVEGGAAVAHS 301 (364) Q Consensus 226 ~~l~i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~----~gi~~iLVEGG~~l~~s 301 (364) ++...+.+. ...+ ..++.+++..+.+ ...+.++|-||+.+..+ T Consensus 77 r~~~~~~~~---------~~~~------------------------~~s~~~~~~~~~~~~~~~~~~~i~IiGG~~iY~~ 123 (186) T d1kmva_ 77 RELKEPPQG---------AHFL------------------------SRSLDDALKLTEQPELANKVDMVWIVGGSSVYKE 123 (186) T ss_dssp SSCSSCCTT---------CSEE------------------------ESSHHHHHHHHTSTTTTTTEEEEEECCCHHHHHH T ss_pred CCCCCCCCC---------CEEE------------------------CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH T ss_conf 255545566---------4563------------------------1689999987544765257772999762789999 Q ss_pred HHHCCCCCEEEEEEECEEECCCCCCCCCCCCCCCCCCEEEEEE-------EECCC---EEEEEEECC Q ss_conf 9978898899999607432688752333454544464054468-------86793---699995074 Q gi|254780348|r 302 FINSRLVDSIILYRSQIVIGEGGIPSPLEEGYLEKNFMCVRRD-------YFGSD---VCLEYIGKN 358 (364) Q Consensus 302 fl~~~LvDEl~ifiaP~ilG~~g~~s~~~~~~~~~~~~l~~~~-------~ig~D---v~~~y~~k~ 358 (364) ||+..++|+++++.-..-.-++. -.|. .....|++++.. .-.++ .+.+|.|++ T Consensus 124 ~L~~~~~~~i~lT~I~~~~~~D~-ffP~---id~~~~~~~~~~~~~~~~~~~~~~~~y~F~~y~r~~ 186 (186) T d1kmva_ 124 AMNHPGHLKLFVTRIMQDFESDT-FFPE---IDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKND 186 (186) T ss_dssp HHTSCSCEEEEEEEESSCCCCSE-ECCC---CCTTTCEECSCCTTCCCSCEEETTEEEEEEEEEEC- T ss_pred HHHCCCCCEEEEEEECCEECCCE-ECCC---CCHHHCEEEEEECCCCCCCCCCCCCCEEEEEEEECC T ss_conf 97367634899999731007888-8787---896996898875264357753289718999999796 No 21 >d1ra9a_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Escherichia coli [TaxId: 562]} Probab=97.89 E-value=0.00015 Score=47.96 Aligned_cols=151 Identities=15% Similarity=0.154 Sum_probs=90.1 Q ss_pred HHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC Q ss_conf 01101027877202113653222210135666764201440366312201345423544344443442157644668998 Q gi|254780348|r 152 ITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQEHSPMRIILDPHFKLS 231 (364) Q Consensus 152 V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~riVld~~l~i~ 231 (364) |.+=.|++.||-|+ .+|+--| ..++..++..++ ..-.++++|.+|...= |+ .+ +++ .-||++++.... T Consensus 2 i~~I~A~~~~~~IG-~~~~lPW-~~~~Dl~~Fk~~-T~~~~viMGrkT~esl-~~---~L---p~R--~niVls~~~~~~ 69 (159) T d1ra9a_ 2 ISLIAALAVDRVIG-MENAMPW-NLPADLAWFKRN-TLDKPVIMGRHTWESI-GR---PL---PGR--KNIILSSQPGTD 69 (159) T ss_dssp EEEEEEECGGGEEE-CSSCCSC-CCHHHHHHHHHH-HTTSCEEEEHHHHHHH-CS---CC---TTS--CEEEECSSCCSC T ss_pred EEEEEEECCCCCEE-CCCCCCE-ECHHHHHHHHHH-CCCCEEEEECCCHHHH-HH---HC---CCC--CEEEEEECCCCC T ss_conf 89999997999450-7995151-489999998851-4897799815183554-65---37---998--129985067754 Q ss_pred HHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEE Q ss_conf 02210034446707985465542101100223222223332227889999860799699981238999999978898899 Q gi|254780348|r 232 LDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRLVDSI 311 (364) Q Consensus 232 ~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~LvDEl 311 (364) .. +.+ ...+..... .......++|=||+++...|+. ++||+ T Consensus 70 ~~-------------------------------~~~----~~~~~~~~~--~~~~~~~i~ViGG~~IY~~~l~--~~d~i 110 (159) T d1ra9a_ 70 DR-------------------------------VTW----VKSVDEAIA--ACGDVPEIMVIGGGRVYEQFLP--KAQKL 110 (159) T ss_dssp TT-------------------------------SEE----ESSHHHHHH--TTCSCSCEEECCCHHHHHHHGG--GCSEE T ss_pred CC-------------------------------CCC----HHHHHHHHH--HHHCCCCEEEECCCHHHHHHHH--HCCEE T ss_conf 32-------------------------------000----132788999--8606874399768059998865--50789 Q ss_pred EEEEECEEECCCCCCCCCCCCCCCCCCEEEEEEEECC------C-EEEEEEEC Q ss_conf 9996074326887523334545444640544688679------3-69999507 Q gi|254780348|r 312 ILYRSQIVIGEGGIPSPLEEGYLEKNFMCVRRDYFGS------D-VCLEYIGK 357 (364) Q Consensus 312 ~ifiaP~ilG~~g~~s~~~~~~~~~~~~l~~~~~ig~------D-v~~~y~~k 357 (364) +++.-+....++ .-.| . .....|++++...... + .+.+|.|| T Consensus 111 ~lT~I~~~~egD-~~FP--~-~d~~~w~~v~~~~~~~~~~~~~~y~f~~y~RK 159 (159) T d1ra9a_ 111 YLTHIDAEVEGD-THFP--D-YEPDDWESVFSEFHDADAQNSHSYCFEILERR 159 (159) T ss_dssp EEEEECCCCCCS-EECC--C-CCGGGEEEEEEEEECCCSSCSSCEEEEEEEEC T ss_pred EEEEECCCCCCC-EECC--C-CCHHHCEEEEEEECCCCCCCCCCEEEEEEECC T ss_conf 999847642684-4689--9-98689899999972667789986799999869 No 22 >d1alna2 c.97.1.1 (A:151-294) Two-domain cytidine deaminase {Escherichia coli [TaxId: 562]} Probab=97.79 E-value=2.1e-05 Score=53.76 Aligned_cols=98 Identities=16% Similarity=0.096 Sum_probs=73.7 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE-ECCEEEEEEECCCC---CCCHHHHHHHHHH---CCHHCCCEEEEECC Q ss_conf 78999999999999870882188896479998-69989999843887---6984899999973---00106988999057 Q gi|254780348|r 5 SFDARFMSAALRFSRWHVGLTSTNPSVACLIV-KDGIVIGRGVTAYG---GCPHAEVQALEEA---GEEARGATAYVTLE 77 (364) Q Consensus 5 ~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv-~~g~ii~~g~~~~~---G~~HAE~~al~~~---~~~~~~atlyvtLE 77 (364) ..|..+++.|++.|++..--.+..| |||++. +||+|+.-.+.... -+-|||..||.++ |.+..+-...|.+| T Consensus 36 ~~~d~L~~~A~~aa~~ayaPYS~~~-vGaal~~~~G~i~~G~nvEnaa~~~slcAE~~Ai~~av~~G~~~~~I~~~v~ve 114 (144) T d1alna2 36 LTGDALSQAAIAAANRSHMPYSKSP-SGVALECKDGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAE 114 (144) T ss_dssp CCSSHHHHHHHHHHHTCBCTTTCCC-EEEEEEETTSCEEEEECBCCTTSTTCBCHHHHHHHHHHHTTCCGGGEEEEEEEE T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCC-CEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEE T ss_conf 6879999999999984629878985-158999679999997631135567885589999999998499956879999982 Q ss_pred ----CCCCCCCCCHHHHHHHHCCCCEEEEE Q ss_conf ----32115752105556530134324663 Q gi|254780348|r 78 ----PCSHYGRSPPCAQFIIECGIRRVVVC 103 (364) Q Consensus 78 ----PC~h~GktppC~~~ii~~gIk~Vvi~ 103 (364) ||+|.|.+..|...|-...++.|+++ T Consensus 115 ~~~~~is~~~~~r~~l~~~~~~~~~~v~l~ 144 (144) T d1alna2 115 KADAPLIQWDATSATLKALGCHSIDRVLLA 144 (144) T ss_dssp CTTCSSCCHHHHHHHHHHHTCCCEEEEECC T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCEEEEEC T ss_conf 799987838999999998667787289839 No 23 >d1df7a_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Mycobacterium tuberculosis [TaxId: 1773]} Probab=97.34 E-value=0.0011 Score=41.99 Aligned_cols=117 Identities=16% Similarity=0.146 Sum_probs=72.2 Q ss_pred HHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEE--EEECCCCC Q ss_conf 0110102787720211365322221013566676420144036631220134542354434444344215--76446689 Q gi|254780348|r 152 ITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQEHSPMR--IILDPHFK 229 (364) Q Consensus 152 V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~r--iVld~~l~ 229 (364) |.+=+|++.+|-|+ .+|+--| .-++..++..++ ..-.+|++|.+|... | +.....-|-| ||++++.+ T Consensus 2 i~~I~A~~~n~~IG-~~~~lPW-~~~~Dl~~Fk~~-T~~~~viMGrkT~eS----l----p~~~~pLp~R~niVlsr~~~ 70 (159) T d1df7a_ 2 VGLIWAQATSGVIG-RGGDIPW-RLPEDQAHFREI-TMGHTIVMGRRTWDS----L----PAKVRPLPGRRNVVLSRQAD 70 (159) T ss_dssp EEEEEEEETTSEEE-BTTBCSS-CCHHHHHHHHHH-HTTSEEEEEHHHHHH----S----CGGGSSCTTSEEEEECSSTT T ss_pred EEEEEEECCCCCEE-CCCCCCC-CCHHHHHHHHHH-CCCCEEEEECCCHHH----H----CCCCCCCCCCCEEEEECCCC T ss_conf 39999988999775-8996151-288999999996-479869997152455----4----33561489861599714543 Q ss_pred CCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCC Q ss_conf 98022100344467079854655421011002232222233322278899998607996999812389999999788988 Q gi|254780348|r 230 LSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRLVD 309 (364) Q Consensus 230 i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~~~LvD 309 (364) ... .++.++ .++++.+ ....++|=||+++...++. ++| T Consensus 71 ~~~------------------------------~~~~v~----~sl~~a~------~~~~i~IiGG~~IY~~~l~--~~~ 108 (159) T d1df7a_ 71 FMA------------------------------SGAEVV----GSLEEAL------TSPETWVIGGGQVYALALP--YAT 108 (159) T ss_dssp CCC------------------------------TTSEEE----SSHHHHT------TSSSEEECCCHHHHHHHGG--GCS T ss_pred CCC------------------------------EEEEEC----CCHHHHH------CCCCEEEECCHHHHHHHHH--HCC T ss_conf 341------------------------------011000----5898841------6683899543379997533--279 Q ss_pred EEEEEEECEEEC Q ss_conf 999996074326 Q gi|254780348|r 310 SIILYRSQIVIG 321 (364) Q Consensus 310 El~ifiaP~ilG 321 (364) +++++.-....+ T Consensus 109 ~i~lT~I~~~~~ 120 (159) T d1df7a_ 109 RCEVTEVDIGLP 120 (159) T ss_dssp EEEEEEECCCCC T ss_pred EEEEEEEECCCC T ss_conf 999999951378 No 24 >d1aoea_ c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic type {Yeast (Candida albicans) [TaxId: 5476]} Probab=97.27 E-value=0.00033 Score=45.65 Aligned_cols=125 Identities=17% Similarity=0.217 Sum_probs=75.8 Q ss_pred CCHHHHH-HCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH------CCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCE- Q ss_conf 2220110-102787720211365322221013566676420------14403663122013454235443444434421- Q gi|254780348|r 149 RSHITLK-IAVSQDNMIGMAGCGSVPITGFISKNQVHLLRA------QSDAILVGIGTVLADDPELTCRLNGLQEHSPM- 220 (364) Q Consensus 149 rP~V~lK-~A~SlDGkIa~~~g~s~wIT~~~sr~~vh~lRa------~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~- 220 (364) +|-|++= .|++-|+-|.. +|+--| .-++..++..++-. .-.+|++|.+|... ++.....-|- T Consensus 3 ~p~i~~ivaa~~~~~gIG~-~~~LPW-~l~~Dl~~Fk~~T~~~~~~~~~~~vIMGRkT~eS--------lp~~~rPLp~R 72 (192) T d1aoea_ 3 KPNVAIIVAALKPALGIGY-KGKMPW-RLRKEIRYFKDVTTRTTKPNTRNAVIMGRKTWES--------IPQKFRPLPDR 72 (192) T ss_dssp SCCEEEEEEEETTTTEEEB-TTBCSC-CCHHHHHHHHHHHHCCSSTTCEEEEEEEHHHHHH--------SCGGGCSCTTS T ss_pred CCCEEEEEEEECCCCEECC-CCCCCC-CCHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH--------CCCCCCCCCCC T ss_conf 9856999999679972948-990266-6989999999984667666778389997023432--------37431103685 Q ss_pred -EEEECCCCCCCHHHHHCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHH Q ss_conf -5764466899802210034446707985465542101100223222223332227889999860799699981238999 Q gi|254780348|r 221 -RIILDPHFKLSLDSKIIKTALLAPVIIVTENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVA 299 (364) Q Consensus 221 -riVld~~l~i~~~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~ 299 (364) -||++++..... ...++.+ ..+++++++.+. +...|+|=||+++. T Consensus 73 ~niVlSr~~~~~~----------------------------~~~~v~~----~~s~~~al~~~~--~~~~i~ViGG~~iY 118 (192) T d1aoea_ 73 LNIILSRSYENEI----------------------------IDDNIIH----ASSIESSLNLVS--DVERVFIIGGAEIY 118 (192) T ss_dssp EEEEECTTCCCEE----------------------------EETTEEE----ESSHHHHHHTCC--SEEEEEECCCHHHH T ss_pred EEEEEECCCCCCC----------------------------CCCEEEE----ECCHHHHHHHHC--CCCEEEEECCHHHH T ss_conf 5899963654543----------------------------4440355----157999998732--78579995655899 Q ss_pred HHHHHCCCCCEEEEEEEC Q ss_conf 999978898899999607 Q gi|254780348|r 300 HSFINSRLVDSIILYRSQ 317 (364) Q Consensus 300 ~sfl~~~LvDEl~ifiaP 317 (364) .+||+..++|+++++.-. T Consensus 119 ~~~l~~~~~d~i~iT~I~ 136 (192) T d1aoea_ 119 NELINNSLVSHLLITEIE 136 (192) T ss_dssp HHHTTSTTEEEEEEEEEE T ss_pred HHHHHCCCCCEEEEEEEE T ss_conf 997533048989999995 No 25 >d2z3ga1 c.97.1.1 (A:2-124) Blasticidin-S deaminase {Aspergillus terreus [TaxId: 33178]} Probab=96.67 E-value=0.0097 Score=35.72 Aligned_cols=93 Identities=27% Similarity=0.380 Sum_probs=60.2 Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE-ECCEEEEEEECCC--CCCCHHHHHHHHHHCCH-HCCC-EEEEE- Q ss_conf 68778999999999999870882188896479998-6998999984388--76984899999973001-0698-89990- Q gi|254780348|r 2 PVSSFDARFMSAALRFSRWHVGLTSTNPSVACLIV-KDGIVIGRGVTAY--GGCPHAEVQALEEAGEE-ARGA-TAYVT- 75 (364) Q Consensus 2 ~~~~~d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv-~~g~ii~~g~~~~--~G~~HAE~~al~~~~~~-~~~a-tlyvt- 75 (364) |+|..|+..+.+|..... ...-+-|-.|||++. +||+|+ .|.... ..+-+||..||-++-.. .+.- ++++. T Consensus 1 pl~~~~~~Li~~A~~~~~--~~~~~s~f~VGAa~l~~~G~i~-~G~NvEN~s~glCAEr~Ai~~a~~~g~~~i~~i~~v~ 77 (123) T d2z3ga1 1 PLSQEESTLIERATATIN--SIPISEDYSVASAALSSDGRIF-TGVNVYHFTGGPCAELVVLGTAAAAAAGNLTCIVAIG 77 (123) T ss_dssp CCCHHHHHHHHHHHHHHH--HSCCCSSSCEEEEEEETTSCEE-EEECCCCTTTCCCHHHHHHHHHHHTTCCCEEEEEEEE T ss_pred CCCHHHHHHHHHHHHHHH--CCCCCCCCCEEEEEEECCCCEE-EEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEE T ss_conf 989899999999999974--4798789877999995899999-9871147888633551576556650897448999997 Q ss_pred ------CCCCCCCCCCCHHHHHHHHCCC-CEEEEE Q ss_conf ------5732115752105556530134-324663 Q gi|254780348|r 76 ------LEPCSHYGRSPPCAQFIIECGI-RRVVVC 103 (364) Q Consensus 76 ------LEPC~h~GktppC~~~ii~~gI-k~Vvi~ 103 (364) +-|| +-|-+.|.+.+- -+|++. T Consensus 78 ~~~~~~~sPC------G~CRQ~l~Ef~~~~~vi~~ 106 (123) T d2z3ga1 78 NENRGILSPC------GRCRQVLLDLHPGIKAIVK 106 (123) T ss_dssp TTTTEEECCC------HHHHHHHHHHCTTCEEEEE T ss_pred CCCCCCCCCC------HHHHHHHHHHCCCCEEEEE T ss_conf 6898767830------8899999996899769999 No 26 >d1r5ta_ c.97.1.1 (A:) mono-domain cytidine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=96.39 E-value=0.028 Score=32.58 Aligned_cols=85 Identities=24% Similarity=0.411 Sum_probs=51.8 Q ss_pred HHHHHHHHHHHHCCC---CCCCCCCEEEEEE-ECCEEEEEEECC----CCCCCHHHHHHHHHH---CCHHCCCEEEEE-- Q ss_conf 999999999987088---2188896479998-699899998438----876984899999973---001069889990-- Q gi|254780348|r 9 RFMSAALRFSRWHVG---LTSTNPSVACLIV-KDGIVIGRGVTA----YGGCPHAEVQALEEA---GEEARGATAYVT-- 75 (364) Q Consensus 9 ~~m~~a~~~a~~~~g---~t~pNP~Vg~viv-~~g~ii~~g~~~----~~G~~HAE~~al~~~---~~~~~~atlyvt-- 75 (364) +-++..++.|.+... .-+-|=.|||++. +||+|+ .|... ...+-|||..||-++ |.+.....+.++ T Consensus 8 ~~~~~L~~~a~~a~~~ayaPYS~f~VGAAl~t~~G~I~-~G~NvEnas~~~~lCAEr~Ai~~a~~~g~~~~~~~~vv~~~ 86 (141) T d1r5ta_ 8 RQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIF-TGANVENASYSNCICAERSAMIQVLMAGHRSGWKCMVICGD 86 (141) T ss_dssp HHHHHHHHHHHHHGGGCBCTTTCCCEEEEEECTTSCEE-EEECBCCSSGGGCBCHHHHHHHHHHHTTCCSCCCEEEEEES T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEC T ss_conf 99999999999999818288669947899996899898-88861245555566777889999887068764068998506 Q ss_pred -----CCCCCCCCCCCHHHHHHHHCCCCEE Q ss_conf -----5732115752105556530134324 Q gi|254780348|r 76 -----LEPCSHYGRSPPCAQFIIECGIRRV 100 (364) Q Consensus 76 -----LEPC~h~GktppC~~~ii~~gIk~V 100 (364) +-|| +-|-+.|.+.+-+.. T Consensus 87 ~~~~~~sPC------G~CRQ~l~E~~~~~~ 110 (141) T d1r5ta_ 87 SEDQCVSPC------GVCRQFINEFVVKDF 110 (141) T ss_dssp CSSSCCCCC------HHHHHHHHTTSCTTC T ss_pred CCCCCCCCH------HHHHHHHHHHCCCCC T ss_conf 777778822------879999999668985 No 27 >d2fr5a1 c.97.1.1 (A:11-146) mono-domain cytidine deaminase {Mouse (Mus musculus) [TaxId: 10090]} Probab=96.03 E-value=0.02 Score=33.53 Aligned_cols=81 Identities=21% Similarity=0.241 Sum_probs=50.1 Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEEE-ECCEEEEEEECCC----CCCCHHHHHHHHHHC---CHHCCCEEEEE----- Q ss_conf 9999999999870882188896479998-6998999984388----769848999999730---01069889990----- Q gi|254780348|r 9 RFMSAALRFSRWHVGLTSTNPSVACLIV-KDGIVIGRGVTAY----GGCPHAEVQALEEAG---EEARGATAYVT----- 75 (364) Q Consensus 9 ~~m~~a~~~a~~~~g~t~pNP~Vg~viv-~~g~ii~~g~~~~----~G~~HAE~~al~~~~---~~~~~atlyvt----- 75 (364) +.+..|. .|++....-+-|-.|||++. +||+|. .|.... ..+-|||..||-++- .+...+.+.++ T Consensus 7 ~l~~~A~-~a~~~AyaPYS~f~VGAa~~~~dG~i~-~G~NvEnasy~~~iCAEr~Ai~~a~~~g~~~~~~~~~~~~~~~~ 84 (136) T d2fr5a1 7 RLLLSSR-EAKKSAYCPYSRFPVGAALLTGDGRIF-SGCNIENACYPLGVCAERTAIQKAISEGYKDFRAIAISSDLQEE 84 (136) T ss_dssp HHHHHHH-HHHTTCBCTTTCCCEEEEEEETTSCEE-EEECBCCSSGGGCBCHHHHHHHHHHHTTCCCEEEEEEEESCSSS T ss_pred HHHHHHH-HHHHCCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCHHHEEEEEEECCCCCCEEEEEEECCCCCC T ss_conf 9999999-999628488669967899995899899-98740356665663522100023101288517999831146788 Q ss_pred -CCCCCCCCCCCHHHHHHHHCCC Q ss_conf -5732115752105556530134 Q gi|254780348|r 76 -LEPCSHYGRSPPCAQFIIECGI 97 (364) Q Consensus 76 -LEPC~h~GktppC~~~ii~~gI 97 (364) +-|| +-|-+.|.+.+- T Consensus 85 ~~~PC------G~CRQ~l~E~~~ 101 (136) T d2fr5a1 85 FISPC------GACRQVMREFGT 101 (136) T ss_dssp CCCCC------HHHHHHHHHTCS T ss_pred CCCCC------HHHHHHHHHHCC T ss_conf 87865------666589986099 No 28 >d1uwza_ c.97.1.1 (A:) mono-domain cytidine deaminase {Bacillus subtilis [TaxId: 1423]} Probab=95.92 E-value=0.017 Score=34.12 Aligned_cols=90 Identities=28% Similarity=0.385 Sum_probs=54.6 Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEEE-ECCEEEEEEECCCC----CCCHHHHHHHHHHC---CHHCCCEEEEE----- Q ss_conf 9999999999870882188896479998-69989999843887----69848999999730---01069889990----- Q gi|254780348|r 9 RFMSAALRFSRWHVGLTSTNPSVACLIV-KDGIVIGRGVTAYG----GCPHAEVQALEEAG---EEARGATAYVT----- 75 (364) Q Consensus 9 ~~m~~a~~~a~~~~g~t~pNP~Vg~viv-~~g~ii~~g~~~~~----G~~HAE~~al~~~~---~~~~~atlyvt----- 75 (364) ..+..|++ |++....-+-|-.|||++. .+|+|+ .|..... .+-+||..||-++- +....+...++ T Consensus 5 ~L~~~A~~-a~~~ayaPyS~f~VGAa~~~~~G~i~-~G~NvEnas~~~~~CAEr~Ai~~a~~~g~~~~~~i~v~~~~~~~ 82 (130) T d1uwza_ 5 ELITEALK-ARDMAYAPYSKFQVGAALLTKDGKVY-RGCNIENAAYSMCNCAEATALFKAVSEGDTEFQMLAVAADTPGP 82 (130) T ss_dssp HHHHHHHH-HHTTCBCTTTCCCEEEEEEETTSCEE-EEECBCCSSGGGCBCHHHHHHHHHHHHTCCCEEEEEEEESCSSS T ss_pred HHHHHHHH-HHHHCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCCEEHHHHHHHHHHHCCEEEEEEECCCCCC T ss_conf 99999999-99718287569948899996899999-87600345666553200035678888642012268997289986 Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCEEEEECCC Q ss_conf 5732115752105556530134324663010 Q gi|254780348|r 76 LEPCSHYGRSPPCAQFIIECGIRRVVVCVDD 106 (364) Q Consensus 76 LEPC~h~GktppC~~~ii~~gIk~Vvi~~~D 106 (364) +-||-+ |-+.|.+.+-+.+.|-..+ T Consensus 83 ~sPCG~------CRQ~l~E~~~~~~~i~l~~ 107 (130) T d1uwza_ 83 VSPCGA------CRQVISELCTKDVIVVLTN 107 (130) T ss_dssp CCCCHH------HHHHHHHHSCTTCEEEEEC T ss_pred CCCCHH------HHHHHHHHCCCCCEEEEEC T ss_conf 676789------9999998478984899987 No 29 >d2d30a1 c.97.1.1 (A:1-124) mono-domain cytidine deaminase {Bacillus anthracis [TaxId: 1392]} Probab=95.65 E-value=0.022 Score=33.38 Aligned_cols=92 Identities=22% Similarity=0.296 Sum_probs=55.2 Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEE-ECCEEEEEEECCCC----CCCHHHHHHHHHHCCH--HCCCEEEEEC--- Q ss_conf 999999999999870882188896479998-69989999843887----6984899999973001--0698899905--- Q gi|254780348|r 7 DARFMSAALRFSRWHVGLTSTNPSVACLIV-KDGIVIGRGVTAYG----GCPHAEVQALEEAGEE--ARGATAYVTL--- 76 (364) Q Consensus 7 d~~~m~~a~~~a~~~~g~t~pNP~Vg~viv-~~g~ii~~g~~~~~----G~~HAE~~al~~~~~~--~~~atlyvtL--- 76 (364) ++..++.|++..++. ..-+-|-.|||.+. +||+|+ .|..... -+-|||..||-++-.. .+-..+.|.= T Consensus 3 ~~~L~~~A~~a~~~a-yaPyS~f~VGAal~~~~G~i~-~G~NvEn~s~~~~~CAEr~Ai~~a~~~g~~~~~~i~v~~~~~ 80 (124) T d2d30a1 3 SKQLIQEAIEARKQA-YVPYSKFQVGAALLTQDGKVY-RGCNVENASYGLCNCAERTALFKAVSEGDKEFVAIAIVADTK 80 (124) T ss_dssp HHHHHHHHHHHHTTC-BCTTTCCCEEEEEEETTCCEE-EEECBCCSSGGGCBCHHHHHHHHHHHTTCCCEEEEEEEESCS T ss_pred HHHHHHHHHHHHHCC-CCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCC T ss_conf 899999999999718-388669968999996899999-998632555776548899998988765873057999982787 Q ss_pred ---CCCCCCCCCCHHHHHHHHCCCC--EEEEECCC Q ss_conf ---7321157521055565301343--24663010 Q gi|254780348|r 77 ---EPCSHYGRSPPCAQFIIECGIR--RVVVCVDD 106 (364) Q Consensus 77 ---EPC~h~GktppC~~~ii~~gIk--~Vvi~~~D 106 (364) -|| +-|-+.|.+.+-. +|++...| T Consensus 81 ~~~~PC------G~CRQ~l~E~~~~~~~i~~~~~~ 109 (124) T d2d30a1 81 RPVPPC------GACRQVMVELCKQDTKVYLSNLH 109 (124) T ss_dssp SCCCCC------HHHHHHHHHHSCTTCEEEEECSS T ss_pred CCCCCC------HHHHHHHHHHCCCCCEEEEECCC T ss_conf 755873------57899999856899489998699 No 30 >d1alna1 c.97.1.1 (A:1-150) Two-domain cytidine deaminase {Escherichia coli [TaxId: 562]} Probab=95.61 E-value=0.033 Score=32.15 Aligned_cols=79 Identities=28% Similarity=0.315 Sum_probs=53.5 Q ss_pred HHHHHHHHHHHCCCCCCCCCCEEEEEE-ECCEEEEEEECCCC------CCCHHHHHHHHHH---CCHHCCCEEEEECCCC Q ss_conf 999999999870882188896479998-69989999843887------6984899999973---0010698899905732 Q gi|254780348|r 10 FMSAALRFSRWHVGLTSTNPSVACLIV-KDGIVIGRGVTAYG------GCPHAEVQALEEA---GEEARGATAYVTLEPC 79 (364) Q Consensus 10 ~m~~a~~~a~~~~g~t~pNP~Vg~viv-~~g~ii~~g~~~~~------G~~HAE~~al~~~---~~~~~~atlyvtLEPC 79 (364) .+...+.+|......-.-|=.|||++. ++|+|. .|..... .+-|||..||.++ |+. +-.+++|+.-|| T Consensus 52 l~~~llp~Aa~~AyaPyS~F~VGAa~~~~~G~iy-~G~NvE~~nas~~~sicAEr~Ai~~a~~~G~~-~i~~i~v~~sPC 129 (150) T d1alna1 52 LAFALLPLAAACARTPLSNFNVGAIARGVSGTWY-FGANMEFIGATMQQTVHAEQSAISHAWLSGEK-ALAAITVNYTPC 129 (150) T ss_dssp HHHHHHHHHHTTCBCTTTCCCCEEEEEETTSCEE-EEECBCCTTSCGGGCBCHHHHHHHHHHHTTCC-CEEEEEESSCCC T ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC-CEEEEEEECCCC T ss_conf 9999999999856598789856899992899999-98851146775677778999999999864898-346999975897 Q ss_pred CCCCCCCHHHHHHHHCC Q ss_conf 11575210555653013 Q gi|254780348|r 80 SHYGRSPPCAQFIIECG 96 (364) Q Consensus 80 ~h~GktppC~~~ii~~g 96 (364) -| |-+.|.+.. T Consensus 130 G~------CRQ~m~E~~ 140 (150) T d1alna1 130 GH------CRQFMNELN 140 (150) T ss_dssp HH------HHHHHTTBT T ss_pred HH------HHHHHHHHC T ss_conf 66------889999966 No 31 >d1juva_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Bacteriophage T4 [TaxId: 10665]} Probab=94.71 E-value=0.14 Score=27.86 Aligned_cols=37 Identities=16% Similarity=0.157 Sum_probs=30.1 Q ss_pred CCCCEEEECCHHHHHHHHHHCCCCCEEEEEEECEEECCC Q ss_conf 799699981238999999978898899999607432688 Q gi|254780348|r 285 RGVTSLLVEGGAAVAHSFINSRLVDSIILYRSQIVIGEG 323 (364) Q Consensus 285 ~gi~~iLVEGG~~l~~sfl~~~LvDEl~ifiaP~ilG~~ 323 (364) .+...|+|=||+.+..+||. ++|+++++.-..-...+ T Consensus 119 ~~~~~i~VIGG~~IY~~~l~--~~d~i~lT~I~~~~~~d 155 (193) T d1juva_ 119 DQNSKVSVIGGPALLYAALP--YADEVVVSRIVKRHRVN 155 (193) T ss_dssp CTTSCEEEEECHHHHHHHGG--GCSEEEEEEEEESSCCC T ss_pred CCCCEEEEEECHHHHHHHHH--HCCEEEEEEECCCCCCC T ss_conf 68864999929999999998--78999999964633467 No 32 >d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]} Probab=70.40 E-value=2.5 Score=19.43 Aligned_cols=121 Identities=18% Similarity=0.184 Sum_probs=49.3 Q ss_pred CCEEEEECCCCC---CCCCCC-----HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC--CCCEEEECCCCHHHHHH Q ss_conf 988999057321---157521-----05556530134324663010121101243311001--89889622210123200 Q gi|254780348|r 69 GATAYVTLEPCS---HYGRSP-----PCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQ--KGIIVDRMMESEGKIFL 138 (364) Q Consensus 69 ~atlyvtLEPC~---h~Gktp-----pC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~--~GI~V~~~~~~~~~~ln 138 (364) +--+||=+-|-. +|.... -......+.|+.-||+|+.|+|-.+.-.-.+.|-+ .|.+|+ ++ T Consensus 50 ~iPv~vMIRPR~GdF~Ys~~E~~~M~~di~~~k~~G~dGvV~G~L~~dg~iD~~~~~~L~~~a~~l~vT---------FH 120 (247) T d1twda_ 50 TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVT---------FH 120 (247) T ss_dssp CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTSEEE---------EC T ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEE---------EE T ss_conf 997279970489988789899999999999999859986899788898881499999999996336725---------30 Q ss_pred HHHHHHCCCCCCHHHHHHCCCHHHH--CCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCC Q ss_conf 1222201134222011010278772--02113653222210135666764201440366312201345 Q gi|254780348|r 139 HAYLTRQVEKRSHITLKIAVSQDNM--IGMAGCGSVPITGFISKNQVHLLRAQSDAILVGIGTVLADD 204 (364) Q Consensus 139 ~~f~~~~~~~rP~V~lK~A~SlDGk--Ia~~~g~s~wIT~~~sr~~vh~lRa~~DaIlvG~~Tv~~Dn 204 (364) ++|-.. ..|+-.++....+ |. |=+..|...-+.|..-.+...+. +...-||.|++ ++.+| T Consensus 121 RAfD~~---~d~~~al~~Li~l-G~~rILTSGg~~~a~~G~~~L~~L~~~-a~~~iIm~GgG-I~~~N 182 (247) T d1twda_ 121 RAFDMC---ANPLYTLNNLAEL-GIARVLTSGQKSDALQGLSKIMELIAH-RDAPIIMAGAG-VRAEN 182 (247) T ss_dssp GGGGGC---SCHHHHHHHHHHH-TCCEEEECTTSSSTTTTHHHHHHHHTS-SSCCEEEEESS-CCTTT T ss_pred HHHHHH---CCHHHHHHHHHHC-CCCEEECCCCCCCHHHHHHHHHHHHHH-CCCCEEEECCC-CCHHH T ss_conf 024652---8999999999766-978675157988656779999999983-69968995487-89899 No 33 >d1zcza2 c.97.1.4 (A:158-452) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]} Probab=67.23 E-value=3.6 Score=18.42 Aligned_cols=94 Identities=16% Similarity=0.127 Sum_probs=55.0 Q ss_pred HHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHCCHHCCCEEEEECCCCCCCCCCCHHHH Q ss_conf 99999999870882188896479998699899998438876984899999973001069889990573211575210555 Q gi|254780348|r 11 MSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYGGCPHAEVQALEEAGEEARGATAYVTLEPCSHYGRSPPCAQ 90 (364) Q Consensus 11 m~~a~~~a~~~~g~t~pNP~Vg~viv~~g~ii~~g~~~~~G~~HAE~~al~~~~~~~~~atlyvtLEPC~h~GktppC~~ 90 (364) +..|+++.+. .+.| .|||+|...--|.+...-. .-|-..|+.--+..+.|..+-++ .|+ +...++ T Consensus 47 ~~aA~~lv~e-----f~~p--a~viiKH~nPCGvA~~~~~--~~A~~~A~~~Dp~SAFGgiVa~N-~~v-----d~~~A~ 111 (295) T d1zcza2 47 AENAWFMAKN-----LPRM--GAVVVKHQSPCGAAIGEDK--VEIVKKAIEADDESSFGGILAVN-FEM-----DEEVAK 111 (295) T ss_dssp HHHHHHHHHT-----CSSS--EEEEEETTEEEEEEECSCH--HHHHHHHHHHTTTTTTTEEEEES-SCB-----CHHHHH T ss_pred HHHHHHHHHH-----CCCC--CEEEEEECCCCCCCCCCCC--CHHHHHHHEECCCCCCCEEEEEC-CCC-----CHHHHH T ss_conf 9999999983-----7987--4589971365665535552--13312221114643221599835-542-----104788 Q ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEE Q ss_conf 653013432466301012110124331100189889 Q gi|254780348|r 91 FIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGIIV 126 (364) Q Consensus 91 ~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI~V 126 (364) +| +. .-+|||+- |- .....++|++..+.+ T Consensus 112 ~i-~~-f~EvIiAP-~f----~~eAleiL~kKk~~~ 140 (295) T d1zcza2 112 SL-KK-YLEVIVAP-SF----TQEAIEVLSKKKVRL 140 (295) T ss_dssp HC-CS-CEEEEECS-CB----CHHHHHHHTTSSCEE T ss_pred HH-HH-CCEEEEEC-CC----CHHHHHHHCCCCCCC T ss_conf 86-44-33899965-86----355688860143100 No 34 >d1o13a_ c.55.5.1 (A:) Hypothetical protein TM1816 {Thermotoga maritima [TaxId: 2336]} Probab=58.35 E-value=2.8 Score=19.07 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=15.2 Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEE Q ss_conf 55653013432466301012110124331100189889 Q gi|254780348|r 89 AQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGIIV 126 (364) Q Consensus 89 ~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI~V 126 (364) ++.+...|+.-|+.+...|+ ..+.|+++||+| T Consensus 57 ~~~l~~~gv~~vi~~~iG~~------a~~~L~~~GI~v 88 (107) T d1o13a_ 57 PNFVKEKGAELVIVRGIGRR------AIAAFEAMGVKV 88 (107) T ss_dssp HHHHHHTTCSEEECSCCCHH------HHHHHHHTTCEE T ss_pred HHHHHHCCCCEEEECCCCHH------HHHHHHHCCCEE T ss_conf 99999779979998877988------999999889999 No 35 >d1i4na_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Thermotoga maritima [TaxId: 2336]} Probab=57.28 E-value=2.2 Score=19.81 Aligned_cols=29 Identities=28% Similarity=0.502 Sum_probs=15.6 Q ss_pred HHHHHHHHHHHCCCCEEEEHHHHCCCCCC Q ss_conf 13566676420144036631220134542 Q gi|254780348|r 178 ISKNQVHLLRAQSDAILVGIGTVLADDPE 206 (364) Q Consensus 178 ~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~ 206 (364) .+..++..+|+-+||+|||..=+..+||. T Consensus 212 ~~~~d~~~l~~G~davLIG~sLm~~~~p~ 240 (251) T d1i4na_ 212 KDPRELKDLRGKVNAVLVGTSIMKAENPR 240 (251) T ss_dssp CCGGGHHHHTTTCSEEEECHHHHHCSSHH T ss_pred CCHHHHHHHHHCCCEEEECHHHHCCCCHH T ss_conf 99999999982899999886874899999 No 36 >d1piia2 c.1.2.4 (A:1-254) Indole-3-glycerophosphate synthase, IPGS {Escherichia coli [TaxId: 562]} Probab=55.28 E-value=1.8 Score=20.47 Aligned_cols=28 Identities=25% Similarity=0.316 Sum_probs=11.7 Q ss_pred HHHHHHHHHHCCCCEEEEHHHHCCCCCC Q ss_conf 3566676420144036631220134542 Q gi|254780348|r 179 SKNQVHLLRAQSDAILVGIGTVLADDPE 206 (364) Q Consensus 179 sr~~vh~lRa~~DaIlvG~~Tv~~DnP~ 206 (364) +..++..+++.+||+|||..=+..+||. T Consensus 219 ~~~d~~~l~~g~davLiGeslm~~~dp~ 246 (254) T d1piia2 219 TYAQVRELSHFANGFLIGSALMAHDDLH 246 (254) T ss_dssp CHHHHHHHTTTCSEEEECHHHHTCSCHH T ss_pred CHHHHHHHHCCCCEEEECHHHHCCCCHH T ss_conf 9999999984899999896876799999 No 37 >d1vc4a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Thermus thermophilus [TaxId: 274]} Probab=52.52 E-value=1.9 Score=20.25 Aligned_cols=11 Identities=18% Similarity=0.147 Sum_probs=4.8 Q ss_pred HCCCCEEEEHH Q ss_conf 01440366312 Q gi|254780348|r 188 AQSDAILVGIG 198 (364) Q Consensus 188 a~~DaIlvG~~ 198 (364) ..+||||.-+. T Consensus 127 ~GADaVLLIaa 137 (254) T d1vc4a_ 127 FGASAALLIVA 137 (254) T ss_dssp TTCSEEEEEHH T ss_pred CCCHHHHHHHH T ss_conf 05238999999 No 38 >d1gsoa2 c.30.1.1 (A:-2-103) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Escherichia coli [TaxId: 562]} Probab=52.27 E-value=2.6 Score=19.31 Aligned_cols=79 Identities=18% Similarity=0.175 Sum_probs=49.6 Q ss_pred CCCCHHHHHHHHHHCCHHCCCEEEEEC--------CCCCCC----CCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC Q ss_conf 769848999999730010698899905--------732115----75210555653013432466301012110124331 Q gi|254780348|r 50 GGCPHAEVQALEEAGEEARGATAYVTL--------EPCSHY----GRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQ 117 (364) Q Consensus 50 ~G~~HAE~~al~~~~~~~~~atlyvtL--------EPC~h~----GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~ 117 (364) .||.||=..+|.+... ...+||.- .-|..+ ..-....+...+.+|.=||||-.+| ++.| =.+ T Consensus 11 GgREhAia~~L~~s~~---~~~l~~~pgn~g~~~~~~~~~~~~~~~d~~~i~~~a~~~~idlvviGPE~p--L~~G-l~D 84 (105) T d1gsoa2 11 GGREHALAWKAAQSPL---VETVFVAPGNAGTALEPALQNVAIGVTDIPALLDFAQNEKIDLTIVGPEAP--LVKG-VVD 84 (105) T ss_dssp SHHHHHHHHHHTTCTT---EEEEEEEECCHHHHHSTTEEECCCCTTCHHHHHHHHHHTTCSEEEECSHHH--HHTT-HHH T ss_pred CHHHHHHHHHHHCCCC---CCEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEECCHHH--HHHH-HHH T ss_conf 8799999999833887---647999518776310223305554357689999899982968899770888--8769-999 Q ss_pred CCCCCCCEEEECCCCHH Q ss_conf 10018988962221012 Q gi|254780348|r 118 WLSQKGIIVDRMMESEG 134 (364) Q Consensus 118 ~L~~~GI~V~~~~~~~~ 134 (364) .|+++||.|-|--.+.+ T Consensus 85 ~l~~~gI~vfGP~k~aA 101 (105) T d1gsoa2 85 TFRAAGLKIFGPTAGAA 101 (105) T ss_dssp HHHHTTCCEESCCTTTT T ss_pred HHHHCCCEEECCCHHHH T ss_conf 99988797999287998 No 39 >d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]} Probab=51.57 E-value=1.8 Score=20.41 Aligned_cols=55 Identities=16% Similarity=0.338 Sum_probs=23.9 Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC Q ss_conf 698899905732115752105556530134324663010121101243311001898 Q gi|254780348|r 68 RGATAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGI 124 (364) Q Consensus 68 ~~atlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI 124 (364) +|-+..+-=.-|+--|.---|++++.+.|.++|++.+..+ ..+|.+++.|++++| T Consensus 49 ~gk~viIvDDii~TGgTl~~aa~~Lk~~GA~~V~~~~tHg--ifs~~a~~~l~~~~i 103 (129) T d1u9ya2 49 KDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHP--VLIGDALNKLYSAGV 103 (129) T ss_dssp TTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEEC--CCCTTHHHHHHHHTC T ss_pred CCEEEEEECCHHCCCCCHHHHHHHHHHCCCCCEEEEEECC--CCCHHHHHHHHHCCC T ss_conf 3207999742440651099999999705776358997546--659389999984899 No 40 >d1qzua_ c.34.1.1 (A:) 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a) {Human (Homo sapiens) [TaxId: 9606]} Probab=51.06 E-value=3.3 Score=18.63 Aligned_cols=89 Identities=16% Similarity=0.070 Sum_probs=44.1 Q ss_pred CCCCC-CCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHH-HHHHCCCCEE Q ss_conf 11001-898896222101232001222201134222011010278772021136532222101356667-6420144036 Q gi|254780348|r 117 QWLSQ-KGIIVDRMMESEGKIFLHAYLTRQVEKRSHITLKIAVSQDNMIGMAGCGSVPITGFISKNQVH-LLRAQSDAIL 194 (364) Q Consensus 117 ~~L~~-~GI~V~~~~~~~~~~ln~~f~~~~~~~rP~V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh-~lRa~~DaIl 194 (364) ..|++ .|.+|+.++.+.+..|-.+.......+++-+. ...|-+.. ....| .|+.++|.++ T Consensus 25 ~~L~~~~g~~V~vi~T~~A~~Fv~p~~~~~~~~~~~~~----------------~~~~~~~~--~~~~Hi~La~~aDl~l 86 (181) T d1qzua_ 25 SKLLDIPGLEVAVVTTERAKHFYSPQDIPVTLYSDADE----------------WEMWKSRS--DPVLHIDLRRWADLLL 86 (181) T ss_dssp HHHC---CEEEEEEECTGGGGSSCGGGSCSCEECHHHH----------------HHTCSSTT--SCCHHHHHHTTCSEEE T ss_pred HHHHHHCCCEEEEEECHHHHHHCCCCCCEEECCCCCCC----------------CCCCCCCC--CCCCEEEECCCCCEEE T ss_conf 99987769889999876898554745532442688632----------------23344456--6542577625666899 Q ss_pred EEH---HHH------CCCCCCCCCCCCCCCCCCCEEEEE Q ss_conf 631---220------134542354434444344215764 Q gi|254780348|r 195 VGI---GTV------LADDPELTCRLNGLQEHSPMRIIL 224 (364) Q Consensus 195 vG~---~Tv------~~DnP~Lt~R~~~~~~~~P~riVl 224 (364) |-- ||+ +.||+.+++=. ......|+.++- T Consensus 87 VaPATANtiaK~A~GiaD~lls~~ll-a~~~~kPv~iaP 124 (181) T d1qzua_ 87 VAPLDANTLGKVASGICDNLLTCVMR-AWDRSKPLLFCP 124 (181) T ss_dssp EEEECHHHHHHHHTTCCCSHHHHHHH-TCCTTSCCCEEE T ss_pred EEECCHHHHHHHHCCCCCHHHHHHHH-HCCCCCCEEEEE T ss_conf 98576999999856675778999997-424799889997 No 41 >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} Probab=50.75 E-value=3.7 Score=18.28 Aligned_cols=22 Identities=36% Similarity=0.413 Sum_probs=11.9 Q ss_pred ECCEEEEEEECCCCCCCHHHHH Q ss_conf 6998999984388769848999 Q gi|254780348|r 37 KDGIVIGRGVTAYGGCPHAEVQ 58 (364) Q Consensus 37 ~~g~ii~~g~~~~~G~~HAE~~ 58 (364) ++-+++-+|.|.+.|+-|++.+ T Consensus 5 k~trVlvQGiTG~~G~~ht~~m 26 (119) T d2nu7a1 5 KNTKVICQGFTGSQGTFHSEQA 26 (119) T ss_dssp TTCEEEEETTTSHHHHHHHHHH T ss_pred CCCCEEEECCCCCHHHHHHHHH T ss_conf 9982899768884878999999 No 42 >d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]} Probab=47.74 E-value=3.8 Score=18.23 Aligned_cols=54 Identities=22% Similarity=0.340 Sum_probs=22.1 Q ss_pred CCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC Q ss_conf 98899905732115752105556530134324663010121101243311001898 Q gi|254780348|r 69 GATAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGI 124 (364) Q Consensus 69 ~atlyvtLEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI 124 (364) |-+..+-=.=|+-=|.-=-|++++.+.|-++|++.+.. +..+|...++|.+++| T Consensus 50 gk~viIvDDmi~TGgTl~~aa~~L~~~GA~~V~~~~TH--glfs~~a~~~l~~~~i 103 (149) T d1dkua2 50 GKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTH--PVLSGPAVERINNSTI 103 (149) T ss_dssp TCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEECSE--ECCCTTHHHHHHTSSE T ss_pred CCEEEEEHHHHHCHHHHHHHHHHHHHHCCCEEEEEEEE--CCCCCHHHHHHHCCCC T ss_conf 97899872455460869999999997099559999730--3348538888860577 No 43 >d1eo1a_ c.55.5.1 (A:) Hypothetical protein MTH1175 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Probab=47.15 E-value=5.6 Score=17.10 Aligned_cols=32 Identities=9% Similarity=0.222 Sum_probs=11.8 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCH Q ss_conf 322222333222788999986079969998123 Q gi|254780348|r 263 KNINIIYCDCRDLKKLLTILVGRGVTSLLVEGG 295 (364) Q Consensus 263 ~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG 295 (364) .+++++.+.... ...+..|.++||+=+..++| T Consensus 64 ~~vd~vi~~~iG-~~~~~~L~~~GI~v~~~~~~ 95 (124) T d1eo1a_ 64 NGVKAVIASSPG-PNAFEVLNELGIKIYRATGT 95 (124) T ss_dssp TTCCEEEECCSS-HHHHHHHHHHTCEEEECCSC T ss_pred CCCCEEEECCCC-HHHHHHHHHCCCEEEECCCC T ss_conf 799899989879-88999999879999985997 No 44 >d1zbfa1 c.55.3.1 (A:62-193) BH0863-like Ribonuclease H {Bacillus halodurans [TaxId: 86665]} Probab=45.95 E-value=4.3 Score=17.87 Aligned_cols=43 Identities=21% Similarity=0.041 Sum_probs=24.9 Q ss_pred CCCCCCCCC---EEEEEEECCEEEE-EEECCCCCCC-HHHHHHHHHHCC Q ss_conf 882188896---4799986998999-9843887698-489999997300 Q gi|254780348|r 22 VGLTSTNPS---VACLIVKDGIVIG-RGVTAYGGCP-HAEVQALEEAGE 65 (364) Q Consensus 22 ~g~t~pNP~---Vg~viv~~g~ii~-~g~~~~~G~~-HAE~~al~~~~~ 65 (364) .|.+++||- .|+|+..+|+.+. .|.- ..++. .||..|+-.|=+ T Consensus 10 DGa~~GNPGp~g~g~v~~~~~~~~~~sg~~-~~~TNN~aEl~A~i~aL~ 57 (132) T d1zbfa1 10 DVGSQGNPGIVEYKGVDTKTGEVLFEREPI-PIGTNNMGEFLAIVHGLR 57 (132) T ss_dssp EEEECSSSEEEEEEEEETTTCCEEEECCCE-EEECHHHHHHHHHHHHHH T ss_pred EECCCCCCCHHEEEEEEECCCEEEEEECCC-CCCCHHHHHHHHHHHHHH T ss_conf 504799995126999997599799997686-755459999999999999 No 45 >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} Probab=45.77 E-value=4.1 Score=17.99 Aligned_cols=23 Identities=17% Similarity=0.096 Sum_probs=11.6 Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEH Q ss_conf 221013566676420144036631 Q gi|254780348|r 174 ITGFISKNQVHLLRAQSDAILVGI 197 (364) Q Consensus 174 IT~~~sr~~vh~lRa~~DaIlvG~ 197 (364) |||.+...+..+.+.. ..=+|+. T Consensus 15 iTG~~G~~ht~~m~~y-GT~iVaG 37 (121) T d1oi7a1 15 ITGREGQFHTKQMLTY-GTKIVAG 37 (121) T ss_dssp TTSHHHHHHHHHHHHH-TCEEEEE T ss_pred CCCCHHHHHHHHHHHH-CCCEEEE T ss_conf 8880888999999985-8702763 No 46 >d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]} Probab=39.77 E-value=6 Score=16.88 Aligned_cols=28 Identities=32% Similarity=0.494 Sum_probs=21.5 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEHHHHCC Q ss_conf 2101356667642014403663122013 Q gi|254780348|r 175 TGFISKNQVHLLRAQSDAILVGIGTVLA 202 (364) Q Consensus 175 T~~~sr~~vh~lRa~~DaIlvG~~Tv~~ 202 (364) +++.+..-...+|.++.-+++|++||+. T Consensus 48 ~~~~a~~~I~~l~~~~p~~~vGaGTV~~ 75 (212) T d1vhca_ 48 RSEAAADAIRLLRANRPDFLIAAGTVLT 75 (212) T ss_dssp TSTTHHHHHHHHHHHCTTCEEEEESCCS T ss_pred CCHHHHHHHHHHHHCCCCCEEEEEECCC T ss_conf 8815899999998628873476631465 No 47 >d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]} Probab=38.29 E-value=6.2 Score=16.79 Aligned_cols=28 Identities=32% Similarity=0.449 Sum_probs=20.0 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEHHHHCC Q ss_conf 2101356667642014403663122013 Q gi|254780348|r 175 TGFISKNQVHLLRAQSDAILVGIGTVLA 202 (364) Q Consensus 175 T~~~sr~~vh~lRa~~DaIlvG~~Tv~~ 202 (364) +++.+.+..+.+|.++.-+++|++||+. T Consensus 51 ~~p~a~~~i~~l~~~~p~~~vGaGTV~~ 78 (216) T d1mxsa_ 51 RSQHGLKAIQVLREQRPELCVGAGTVLD 78 (216) T ss_dssp SSTHHHHHHHHHHHHCTTSEEEEECCCS T ss_pred CCHHHHHHHHHHHHHCCCCCEEEEEEEC T ss_conf 9806999999999848975231100120 No 48 >d1hc8a_ a.4.7.1 (A:) Ribosomal protein L11, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]} Probab=35.69 E-value=6 Score=16.91 Aligned_cols=28 Identities=21% Similarity=0.484 Sum_probs=21.2 Q ss_pred CCCCHHHHHHHHC-CCCEEEEECCCCCCCCCC Q ss_conf 7521055565301-343246630101211012 Q gi|254780348|r 83 GRSPPCAQFIIEC-GIRRVVVCVDDPDVRVSG 113 (364) Q Consensus 83 GktppC~~~ii~~-gIk~Vvi~~~DPnp~v~g 113 (364) =||||-+..|.++ ||++ |+.+|...+.| T Consensus 4 ~ktPP~s~llkkaagi~k---Gs~~p~~~~vG 32 (74) T d1hc8a_ 4 TKTPPAAVLLKKAAGIES---GSGEPNRNKVA 32 (74) T ss_dssp CCCCCHHHHHHHHHTCSC---CCSSTTTCCCE T ss_pred CCCCCHHHHHHHHHCCCC---CCCCCCCEEEE T ss_conf 058889999999978886---76877884436 No 49 >d1a53a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Probab=35.35 E-value=7.8 Score=16.10 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=10.4 Q ss_pred HHHHHHHCCCCEEEE Q ss_conf 999986079969998 Q gi|254780348|r 278 LLTILVGRGVTSLLV 292 (364) Q Consensus 278 iL~~L~~~gi~~iLV 292 (364) -++.+.+.|++.+|| T Consensus 217 dv~~l~~~G~davLI 231 (247) T d1a53a_ 217 EIEELRKLGVNAFLI 231 (247) T ss_dssp HHHHHHHTTCCEEEE T ss_pred HHHHHHHCCCCEEEE T ss_conf 999999779999998 No 50 >d1mmsa1 a.4.7.1 (A:71-140) Ribosomal protein L11, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Probab=34.74 E-value=6.1 Score=16.82 Aligned_cols=27 Identities=22% Similarity=0.669 Sum_probs=19.6 Q ss_pred CCCHHHHHHHHC-CCCEEEEECCCCCCCCCC Q ss_conf 521055565301-343246630101211012 Q gi|254780348|r 84 RSPPCAQFIIEC-GIRRVVVCVDDPDVRVSG 113 (364) Q Consensus 84 ktppC~~~ii~~-gIk~Vvi~~~DPnp~v~g 113 (364) ||||-+..|.++ ||++ |+.+|+....| T Consensus 1 KtPP~s~likkaagi~k---Gs~~p~~~~vg 28 (70) T d1mmsa1 1 KTPPASFLLKKAAGIEK---GSSEPKRKIVG 28 (70) T ss_dssp CCCCHHHHHHHHHTCSS---CCSSTTTSCCE T ss_pred CCCCHHHHHHHHHCCCC---CCCCCCCCCCC T ss_conf 98988999999978786---78999984027 No 51 >d1r2ra_ c.1.1.1 (A:) Triosephosphate isomerase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Probab=34.36 E-value=7.9 Score=16.07 Aligned_cols=41 Identities=24% Similarity=0.385 Sum_probs=32.5 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHH Q ss_conf 322222333222788999986079969998123899999997 Q gi|254780348|r 263 KNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFIN 304 (364) Q Consensus 263 ~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~ 304 (364) ..+.+++.++.+++.+-+.+...++..+|| ||+.|-..|++ T Consensus 200 ~~i~ilYGGSV~~~N~~~i~~~~~vDG~LV-GgASL~~eF~~ 240 (246) T d1r2ra_ 200 QSTRIIYGGSVTGATCKELASQPDVDGFLV-GGASLKPEFVD 240 (246) T ss_dssp HHCCEEECSCCCTTTHHHHHTSTTCCEEEE-SGGGGSTHHHH T ss_pred CCCCEEECCCCCHHHHHHHHCCCCCCEEEE-EHHHCCHHHHH T ss_conf 866588608979879999956889896885-02648879999 No 52 >d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]} Probab=32.84 E-value=7.4 Score=16.26 Aligned_cols=41 Identities=27% Similarity=0.377 Sum_probs=18.1 Q ss_pred CHHHHHHHHHHCCCCEEEECC--H--HHHHHHHHHCCCCCEEEEE Q ss_conf 278899998607996999812--3--8999999978898899999 Q gi|254780348|r 274 DLKKLLTILVGRGVTSLLVEG--G--AAVAHSFINSRLVDSIILY 314 (364) Q Consensus 274 dl~~iL~~L~~~gi~~iLVEG--G--~~l~~sfl~~~LvDEl~if 314 (364) .+....+.|.++|..+|.+-. | ..=....|+...+||++.+ T Consensus 98 T~~~a~~~Lk~~GA~~v~~~~tH~~~~~~a~~~l~~~~i~~i~~t 142 (184) T d2c4ka2 98 SFVAAAEILKERGAYKIYVMATHGILSAEAPRLIEESSVDEVVVT 142 (184) T ss_dssp HHHHHHHHHHTTTEEEEEEEEEEECCCTTHHHHHHHSSCCEEEEE T ss_pred HHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHCCCCCEEEEE T ss_conf 799999999742655534788750317617777524774579995 No 53 >d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]} Probab=32.08 E-value=9.2 Score=15.64 Aligned_cols=123 Identities=12% Similarity=0.143 Sum_probs=53.4 Q ss_pred CCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCEEEEECCCCCC Q ss_conf 21013566676420144036631220134542354434444344215764466899802210034446707985465542 Q gi|254780348|r 175 TGFISKNQVHLLRAQSDAILVGIGTVLADDPELTCRLNGLQEHSPMRIILDPHFKLSLDSKIIKTALLAPVIIVTENDDP 254 (364) Q Consensus 175 T~~~sr~~vh~lRa~~DaIlvG~~Tv~~DnP~Lt~R~~~~~~~~P~riVld~~l~i~~~~~l~~~~~~~~~ii~~~~~~~ 254 (364) +++.+......+|.++.-+++|++||+.-+- ++. -..-=..+++++..+-. +.+......+.++-.-..+ T Consensus 49 ~tp~a~~~I~~l~~~~p~~~vGaGTV~~~~~---~~~---a~~aGa~FivSP~~~~~----v~~~a~~~~i~~iPGv~Tp 118 (213) T d1wbha1 49 RTECAVDAIRAIAKEVPEAIVGAGTVLNPQQ---LAE---VTEAGAQFAISPGLTEP----LLKAATEGTIPLIPGISTV 118 (213) T ss_dssp CSTTHHHHHHHHHHHCTTSEEEEESCCSHHH---HHH---HHHHTCSCEEESSCCHH----HHHHHHHSSSCEEEEESSH T ss_pred CCHHHHHHHHHHHHHCCCCEEECCCCCCHHH---HHH---HHHCCCCEEECCCCCHH----HHHHHHHCCCCCCCCCCCH T ss_conf 9825999999999978987152230463899---999---99779929978989889----9999985598755882877 Q ss_pred CHHHHCCCCCCCC---CCCCCCCHHHHHHHHHH-CCCCEEEECCHH--HHHHHHHHCCC Q ss_conf 1011002232222---23332227889999860-799699981238--99999997889 Q gi|254780348|r 255 VLALAFRKKNINI---IYCDCRDLKKLLTILVG-RGVTSLLVEGGA--AVAHSFINSRL 307 (364) Q Consensus 255 ~~~~~~~~~~v~v---i~~~~~dl~~iL~~L~~-~gi~~iLVEGG~--~l~~sfl~~~L 307 (364) .........|.++ +..+.......++.|.. ..--+++--||- .=+..||+++. T Consensus 119 sEi~~A~~~G~~~vKlFPA~~~Gg~~~lkal~~p~p~~~~~ptGGV~~~n~~~yl~~g~ 177 (213) T d1wbha1 119 SELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKS 177 (213) T ss_dssp HHHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTT T ss_pred HHHHHHHHCCCCEEEECCCHHCCHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCC T ss_conf 99999997799979853104207599999862736578365347988888999995898 No 54 >d1n55a_ c.1.1.1 (A:) Triosephosphate isomerase {Leishmania mexicana [TaxId: 5665]} Probab=30.21 E-value=7 Score=16.43 Aligned_cols=40 Identities=23% Similarity=0.434 Sum_probs=30.3 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHH Q ss_conf 32222233322278899998607996999812389999999 Q gi|254780348|r 263 KNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFI 303 (364) Q Consensus 263 ~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl 303 (364) ..+.+++.++.+++.+-+.+...++..+|| ||+.|-..|+ T Consensus 203 ~~i~ilYGGSV~~~N~~~i~~~~~vdG~LV-G~ASl~~~F~ 242 (249) T d1n55a_ 203 AKLRILYGGSVNAANAATLYAKPDINGFLV-GGASLKPEFR 242 (249) T ss_dssp HHCEEEEESSCCTTTHHHHHTSTTCCEEEE-SGGGGSTTHH T ss_pred CCCCEEECCCCCHHHHHHHHCCCCCCEEEE-EHHHCCHHHH T ss_conf 865289718879869999956889896995-2265589999 No 55 >d1o5xa_ c.1.1.1 (A:) Triosephosphate isomerase {Plasmodium falciparum [TaxId: 5833]} Probab=28.41 E-value=8.9 Score=15.75 Aligned_cols=41 Identities=22% Similarity=0.494 Sum_probs=30.8 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHH Q ss_conf 322222333222788999986079969998123899999997 Q gi|254780348|r 263 KNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFIN 304 (364) Q Consensus 263 ~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~ 304 (364) ..+.+++.++.+...+-+.+...++..+|| ||+.|-..|++ T Consensus 200 ~~i~ilYGGSV~~~N~~~i~~~~~idG~LV-G~ASL~~~F~~ 240 (246) T d1o5xa_ 200 NQIRILYGGSVNTENCSSLIQQEDIDGFLV-GNASLKESFVD 240 (246) T ss_dssp HHSEEEECSCCCTTTHHHHHTSTTCCEEEE-CGGGGSTTHHH T ss_pred CCCCEEEECCCCHHHHHHHHCCCCCCEEEE-ECCCCCHHHHH T ss_conf 864289828989759999956889897996-23208889999 No 56 >d1kv5a_ c.1.1.1 (A:) Triosephosphate isomerase {Trypanosoma brucei [TaxId: 5691]} Probab=27.85 E-value=8.4 Score=15.92 Aligned_cols=40 Identities=30% Similarity=0.507 Sum_probs=31.9 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHH Q ss_conf 32222233322278899998607996999812389999999 Q gi|254780348|r 263 KNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFI 303 (364) Q Consensus 263 ~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl 303 (364) ..+.+++.++.+.+.+-+.+...++..+|| ||+.|-..|+ T Consensus 203 ~~~~ilYGGSV~~~N~~~i~~~~~vDG~LV-GgASl~~eF~ 242 (249) T d1kv5a_ 203 GELRILYGGSVNGKNARTLYQQRDVNGFLV-GGASLKPEFV 242 (249) T ss_dssp HHCCEEEESSCCTTTHHHHHTSTTCCEEEE-SGGGGSTTHH T ss_pred CCCCEEECCCCCHHHHHHHHCCCCCCEEEE-CHHHCCHHHH T ss_conf 777489718979869999966889997895-2275698999 No 57 >d2b0va1 d.113.1.1 (A:4-149) Hypothetical protein NE0184 {Nitrosomonas europaea [TaxId: 915]} Probab=27.30 E-value=12 Score=14.92 Aligned_cols=42 Identities=21% Similarity=0.135 Sum_probs=26.9 Q ss_pred CCCCCEEEEEEECCEEEEEE---------ECCCCC----CCHHHHHHHHHHCCHH Q ss_conf 88896479998699899998---------438876----9848999999730010 Q gi|254780348|r 26 STNPSVACLIVKDGIVIGRG---------VTAYGG----CPHAEVQALEEAGEEA 67 (364) Q Consensus 26 ~pNP~Vg~viv~~g~ii~~g---------~~~~~G----~~HAE~~al~~~~~~~ 67 (364) .|+-.|+|||.++|+++=.= |....| +--.+..|++...+.. T Consensus 1 ~P~v~va~ii~~~~k~Llv~r~~~~~~~~w~~PgG~ve~gEt~~~aa~RE~~EEt 55 (146) T d2b0va1 1 KPNVTVAAVIEQDDKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEET 55 (146) T ss_dssp CCEEEEEEECEETTEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHH T ss_pred CCEEEEEEEEEECCEEEEEEEECCCCCCEEECCEEEECCCCCHHHHHHHHHHHHH T ss_conf 9849999999959999999980699999899991367799898999999998762 No 58 >d1mo0a_ c.1.1.1 (A:) Triosephosphate isomerase {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Probab=27.05 E-value=9.6 Score=15.50 Aligned_cols=40 Identities=23% Similarity=0.375 Sum_probs=29.2 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHH Q ss_conf 32222233322278899998607996999812389999999 Q gi|254780348|r 263 KNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFI 303 (364) Q Consensus 263 ~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl 303 (364) ..+.+++.++.+...+-+.+...++..+|| ||+.|-..|+ T Consensus 209 ~~~~iLYGGSV~~~N~~~i~~~~~vDG~LV-GgASL~~~F~ 248 (257) T d1mo0a_ 209 DATRIIYGGSVTADNAAELGKKPDIDGFLV-GGASLKPDFV 248 (257) T ss_dssp HHSCEEEESSCCTTTHHHHTTSTTCCEEEE-SGGGGSTHHH T ss_pred CCCCEEEECCCCHHHHHHHHCCCCCCEEEE-EHHHCCHHHH T ss_conf 766588628859879999956889886995-1475786799 No 59 >d1b9ba_ c.1.1.1 (A:) Triosephosphate isomerase {Thermotoga maritima [TaxId: 2336]} Probab=25.59 E-value=6.9 Score=16.50 Aligned_cols=41 Identities=32% Similarity=0.560 Sum_probs=30.7 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHH Q ss_conf 322222333222788999986079969998123899999997 Q gi|254780348|r 263 KNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFIN 304 (364) Q Consensus 263 ~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl~ 304 (364) ..+.+++.++.+...+-..+...++..+|| ||+.|-.+|++ T Consensus 204 ~~i~ilYGGSV~~~N~~~i~~~~~vDG~LV-GgASL~~~F~~ 244 (252) T d1b9ba_ 204 GSIRILYGGSIKPDNFLGLIVQKDIDGGLV-GGASLKESFIE 244 (252) T ss_dssp HHSEEEEESSCCHHHHTTTSSSTTCCEEEE-SGGGTSTHHHH T ss_pred CCCCEEECCCCCHHHHHHHHCCCCCCEEEE-ECHHCCHHHHH T ss_conf 764289718989879999856779997996-12208878999 No 60 >d3cjrb1 a.4.7.1 (B:71-137) Ribosomal protein L11, C-terminal domain {Thermus thermophilus [TaxId: 274]} Probab=24.83 E-value=9.2 Score=15.65 Aligned_cols=26 Identities=23% Similarity=0.557 Sum_probs=17.8 Q ss_pred CCHHHHHHHHC-CCCEEEEECCCCCCCCCC Q ss_conf 21055565301-343246630101211012 Q gi|254780348|r 85 SPPCAQFIIEC-GIRRVVVCVDDPDVRVSG 113 (364) Q Consensus 85 tppC~~~ii~~-gIk~Vvi~~~DPnp~v~g 113 (364) |||-+..|.++ ||++ |+.+|+....| T Consensus 1 TPP~s~llkkaagi~k---Gs~~p~~e~vG 27 (67) T d3cjrb1 1 TPPASYLIRKAAGLEK---GAHKPGREKVG 27 (67) T ss_dssp CCCHHHHHC--------------------- T ss_pred CCCHHHHHHHHHCCCC---CCCCCCCCCCC T ss_conf 9867999999978886---77999984034 No 61 >d1p90a_ c.55.5.2 (A:) NafY core domain {Azotobacter vinelandii [TaxId: 354]} Probab=24.78 E-value=17 Score=13.81 Aligned_cols=44 Identities=9% Similarity=-0.091 Sum_probs=25.2 Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE Q ss_conf 5732115752105556530134324663010121101243311001898896 Q gi|254780348|r 76 LEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGIIVD 127 (364) Q Consensus 76 LEPC~h~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~gkGi~~L~~~GI~V~ 127 (364) ..+|.+.++.+ .......|+.=|+.+..-| +....|+++||+|- T Consensus 49 ~~~~~~~~~~~--~~~~~~~~~~vvi~~~iG~------~a~~~L~~~GI~vi 92 (123) T d1p90a_ 49 LDVALAEDKNA--WRVEQIQDCQVLYVVSIGG------PAAAKVVRAGIHPL 92 (123) T ss_dssp GGGGGCSSHHH--HHHHHTTTCSEEEESBCCH------HHHHHHHHTTCEEE T ss_pred CCCCCCCCCCH--HHHHHHCCCCEEEECCCCH------HHHHHHHHCCCEEE T ss_conf 57565654106--7775307986999877786------38999997895899 No 62 >d1aw1a_ c.1.1.1 (A:) Triosephosphate isomerase {Vibrio marinus [TaxId: 90736]} Probab=24.53 E-value=17 Score=13.78 Aligned_cols=41 Identities=32% Similarity=0.429 Sum_probs=30.0 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHH-HHHHHH Q ss_conf 322222333222788999986079969998123899-999997 Q gi|254780348|r 263 KNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAV-AHSFIN 304 (364) Q Consensus 263 ~~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l-~~sfl~ 304 (364) ..+.+++.++.+.+.+-+.+...++..+|| ||+.| ..+|.+ T Consensus 204 ~~i~ilYGGSV~~~N~~~i~~~~~vDG~LV-G~ASl~~~~F~~ 245 (255) T d1aw1a_ 204 KNVVIQYGGSVKPENAAAYFAQPDIDGALV-GGAALDAKSFAA 245 (255) T ss_dssp HHCEEEECSCCCTTTHHHHHTSTTCCEEEE-SGGGGSHHHHHH T ss_pred CCCEEEECCCCCHHHHHHHHCCCCCCEEEE-CHHHCCHHHHHH T ss_conf 661089718878758999956889886995-368669899999 No 63 >d1g5qa_ c.34.1.1 (A:) Epidermin modifying enzyme (peptidyl-cysteine decarboxylase) EpiD {Staphylococcus epidermidis [TaxId: 1282]} Probab=24.03 E-value=17 Score=13.85 Aligned_cols=82 Identities=16% Similarity=0.046 Sum_probs=44.3 Q ss_pred CCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHH-HHHHCCCCEE Q ss_conf 311001898896222101232001222201134222011010278772021136532222101356667-6420144036 Q gi|254780348|r 116 LQWLSQKGIIVDRMMESEGKIFLHAYLTRQVEKRSHITLKIAVSQDNMIGMAGCGSVPITGFISKNQVH-LLRAQSDAIL 194 (364) Q Consensus 116 i~~L~~~GI~V~~~~~~~~~~ln~~f~~~~~~~rP~V~lK~A~SlDGkIa~~~g~s~wIT~~~sr~~vh-~lRa~~DaIl 194 (364) ++.|+++|.+|+.++.+.+..+...-......+.. |....+.+ .-| .|+.++|+++ T Consensus 22 i~~L~~~g~~V~vv~T~sA~~fv~~~~l~~~~~~~----------------------~~~~~~~~-~~hi~l~~~aD~~l 78 (174) T d1g5qa_ 22 IVELKQHFDEVNILFSPSSKNFINTDVLKLFCDNL----------------------YDEIKDPL-LNNINIVENHEYIL 78 (174) T ss_dssp HHHHTTTBSCEEEEECGGGGGTSCGGGGGGTSSCE----------------------ECTTTCTT-CCHHHHHHTCSEEE T ss_pred HHHHHHCCCEEEEEEEHHHHHHCCHHHHHHHHCCC----------------------CCCCCCCC-CCCEEECCCCCEEE T ss_conf 99999779908999961163102476786750752----------------------24564556-55333000356499 Q ss_pred E---EHHHH------CCCCCCCCCCCCCCCCCCCEEEE Q ss_conf 6---31220------13454235443444434421576 Q gi|254780348|r 195 V---GIGTV------LADDPELTCRLNGLQEHSPMRII 223 (364) Q Consensus 195 v---G~~Tv------~~DnP~Lt~R~~~~~~~~P~riV 223 (364) | .+||+ +.||+..++-+. ...|+.++ T Consensus 79 VaPaTaNtlaKiA~GiaDnllt~~~la---~~~piiia 113 (174) T d1g5qa_ 79 VLPASANTINKIANGICDNLLTTVCLT---GYQKLFIF 113 (174) T ss_dssp EEEECHHHHHHHHTTCCCSHHHHHHHH---TGGGEEEE T ss_pred EEECCHHHHHHHHHHHCCCCHHHEEEC---CCCCEEEE T ss_conf 973478999999872016515541220---35517998 No 64 >d1vqoi1 a.4.7.1 (I:71-140) Ribosomal protein L11, C-terminal domain {Archaeon Haloarcula marismortui [TaxId: 2238]} Probab=23.62 E-value=12 Score=14.83 Aligned_cols=26 Identities=23% Similarity=0.449 Sum_probs=16.6 Q ss_pred CCHHHHHHHHC-CCCEEEEECCCCCCCCCC Q ss_conf 21055565301-343246630101211012 Q gi|254780348|r 85 SPPCAQFIIEC-GIRRVVVCVDDPDVRVSG 113 (364) Q Consensus 85 tppC~~~ii~~-gIk~Vvi~~~DPnp~v~g 113 (364) |||-+..|.++ ||++ |+.+|+....| T Consensus 2 tPp~s~ll~ka~gi~k---Gs~~p~~~~vg 28 (70) T d1vqoi1 2 VPPTAELIKDEAGFET---GSGEPQEDFVA 28 (70) T ss_dssp CCCHHHHHHHHTCCSS---CCSSTTTSCCE T ss_pred CCCHHHHHHHHHCCCC---CCCCCCCEEEE T ss_conf 7977999999978898---89999980532 No 65 >d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} Probab=23.03 E-value=18 Score=13.59 Aligned_cols=68 Identities=15% Similarity=0.123 Sum_probs=41.5 Q ss_pred HHHHHCCHHC--CC-EEEEECCCCCC-CCCCCHHHHHHHHCCCCEEEEECCCCCCCCC--CCCCCCCCCCCCEE Q ss_conf 9997300106--98-89990573211-5752105556530134324663010121101--24331100189889 Q gi|254780348|r 59 ALEEAGEEAR--GA-TAYVTLEPCSH-YGRSPPCAQFIIECGIRRVVVCVDDPDVRVS--GRGLQWLSQKGIIV 126 (364) Q Consensus 59 al~~~~~~~~--~a-tlyvtLEPC~h-~GktppC~~~ii~~gIk~Vvi~~~DPnp~v~--gkGi~~L~~~GI~V 126 (364) ++++.++..+ |. .+.||=+.=.. .|-.-...+.+-++||.-+++....|||... -++++.+++.++++ T Consensus 16 ~l~~l~~~~~~~g~k~liV~~~~~~~~~g~~~~v~~~L~~~~i~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~ 89 (359) T d1o2da_ 16 ILEKRGNIIDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDF 89 (359) T ss_dssp HHHHHGGGGGGTCSEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSE T ss_pred HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCE T ss_conf 99999999997599589998586888740999999999876984999757468979899987642001357756 No 66 >d1jl1a_ c.55.3.1 (A:) RNase H (RNase HI) {Escherichia coli [TaxId: 562]} Probab=21.96 E-value=19 Score=13.45 Aligned_cols=44 Identities=20% Similarity=0.120 Sum_probs=25.0 Q ss_pred CCCCCCCC---EEEEEEECCEEE--EEEECCCCCCCHHHHHHHHHHCCHH Q ss_conf 82188896---479998699899--9984388769848999999730010 Q gi|254780348|r 23 GLTSTNPS---VACLIVKDGIVI--GRGVTAYGGCPHAEVQALEEAGEEA 67 (364) Q Consensus 23 g~t~pNP~---Vg~viv~~g~ii--~~g~~~~~G~~HAE~~al~~~~~~~ 67 (364) |.+..||- .|+|++.+|... +.+. .......||..|+..|-... T Consensus 9 GS~~~N~g~aG~G~vi~~~~~~~~~~~~~-~~~tnn~aE~~Ai~~Al~~~ 57 (152) T d1jl1a_ 9 GSALGNPGPGGYGAILRYRGREKTFSAGY-TRTTNNRMELMAAIVALEAL 57 (152) T ss_dssp EEESSTTEEEEEEEEEEETTEEEEEEEEE-EEECHHHHHHHHHHHHHHTC T ss_pred CCCCCCCCCEEEEEEEEECCEEEEECCCC-CCCCHHHHHHHHHHHHHHHH T ss_conf 77789989589999999899178850664-75527899886455566653 No 67 >d2q4qa1 c.103.1.1 (A:2-122) Hypothetical protein PTD015 (C11orf67) {Human (Homo sapiens) [TaxId: 9606]} Probab=20.41 E-value=21 Score=13.24 Aligned_cols=13 Identities=15% Similarity=0.509 Sum_probs=5.0 Q ss_pred HHHCCCCEEEEHH Q ss_conf 4201440366312 Q gi|254780348|r 186 LRAQSDAILVGIG 198 (364) Q Consensus 186 lRa~~DaIlvG~~ 198 (364) +....|.|++|.| T Consensus 57 l~~~peilliGtG 69 (121) T d2q4qa1 57 VEKGVQTLVIGRG 69 (121) T ss_dssp HTTCCSEEEEECC T ss_pred HCCCCCEEEECCC T ss_conf 5359999998689 No 68 >d1neya_ c.1.1.1 (A:) Triosephosphate isomerase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=20.35 E-value=7.8 Score=16.10 Aligned_cols=39 Identities=26% Similarity=0.453 Sum_probs=22.5 Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHH Q ss_conf 2222233322278899998607996999812389999999 Q gi|254780348|r 264 NINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFI 303 (364) Q Consensus 264 ~v~vi~~~~~dl~~iL~~L~~~gi~~iLVEGG~~l~~sfl 303 (364) ++.+++.++.+.+.+-+.+...++..+|| ||+.|-..|+ T Consensus 202 ~i~iLYGGSV~~~N~~~i~~~~~iDG~LV-GgASL~~eF~ 240 (247) T d1neya_ 202 ELRILYGGSANGSNAVTFKDKADVDGFLV-GGASLKPEFV 240 (247) T ss_dssp HCCEEEESSCCTTTGGGGTTCTTCCEEEE-SGGGGSTHHH T ss_pred CCCEEEECCCCHHHHHHHHCCCCCCEEEE-EHHHCCHHHH T ss_conf 67489807888889999966889886995-2375886899 Done!