RPSBLAST alignment for GI: 254780348 and conserved domain: TIGR00326

>gnl|CDD|161819 TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD. This model describes the ribD protein as found in Escherichia coli. The N-terminal domain includes the conserved zinc-binding site region captured in the model dCMP_cyt_deam and shared by proteins such as cytosine deaminase, mammalian apolipoprotein B mRNA editing protein, blasticidin-S deaminase, and Bacillus subtilis competence protein comEB. The C-terminal domain is homologous to the full length of yeast HTP reductase, a protein required for riboflavin biosynthesis. A number of archaeal proteins believed related to riboflavin biosynthesis contain only this C-terminal domain and are not found as full-length matches to this model. Length = 344
 Score =  271 bits (695), Expect = 2e-73
 Identities = 140/348 (40%), Positives = 199/348 (57%), Gaps = 11/348 (3%)

Query: 11  MSAALRFSRWHVGLTSTNPSVACLIVKDGIVIGRGVTAYGGCPHAEVQALEEAGEEARGA 70
           M+ AL  ++   G T  NP V C+IVK+G ++G G     G PHAEV AL +AGE A+GA
Sbjct: 1   MNRALDLAKKGQGTTHPNPLVGCVIVKNGEIVGEGAHQKAGEPHAEVHALRQAGENAKGA 60

Query: 71  TAYVTLEPCSHYGRSPPCAQFIIECGIRRVVVCVDDPDVRVSGRGLQWLSQKGIIVDR-M 129
           TAYVTLEPCSH GR+PPCA+ IIE GI++VVV + DP+  V+GRG + L Q GI V   +
Sbjct: 61  TAYVTLEPCSHQGRTPPCAEAIIEAGIKKVVVSMQDPNPLVAGRGAERLKQAGIEVTFGI 120

Query: 130 MESEGKIFLHAYLTRQVEKRSHITLKIAVSQDNMIGMAGCGSVPITGFISKNQVHLLRAQ 189
           ++ E +     +L R      ++ LK+A S D  I  A   S  IT   ++     LRAQ
Sbjct: 121 LKEEAERLNKGFLKRMRTGLPYVQLKLAASLDGKIATASGESKWITSEAARTDAQQLRAQ 180

Query: 190 SDAILVGIGTVLADDPELTCRLNGLQEHSPMRIILDPHFKLSLDSKIIKTALLAPVIIVT 249
           SDAILVG GTV AD+P LT RL+   E  P+R++LD   ++   +K+I    +AP  I T
Sbjct: 181 SDAILVGGGTVKADNPALTARLDEATEQ-PLRVVLDTQLRIPEFAKLIPQ--IAPTWIFT 237

Query: 250 ENDDPVLALAFRKKNINIIYCDCRDLKKLLTILVGRGVTSLLVEGGAAVAHSFINSRLVD 309
              D    L   +  +NI   +   +++++T L  RG+ S+LVEGG  +  SF++  LVD
Sbjct: 238 TARDKKKRLEAFE--VNIFPLEKVTIREVMTQLGKRGINSVLVEGGPNLLGSFLDEGLVD 295

Query: 310 SIILYRSQIVIGEGGIPSPLEEGYLEK-----NFMCVRRDYFGSDVCL 352
            +I+Y +  ++G    P    E   +K     NF  +  +  G D+ L
Sbjct: 296 ELIIYIAPKLLGGTHAPGLCSEPGFQKMADALNFKFLEINQIGPDILL 343