HHsearch alignment for GI: 254780349 and conserved domain: COG1003
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism].
Probab=99.45 E-value=3.7e-11 Score=98.21 Aligned_cols=294 Identities=18% Similarity=0.205 Sum_probs=196.8
Q ss_pred CCCCCCCHHHHHHHHCCCCCCC---CC----CCCCCC---------C-CCCCHHHHHHHHHHHHHHHHHCCCCCEECCCH
Q ss_conf 4301029899998305102886---57----988875---------3-36006799999999999998718863010000
Q gi|254780349|r 40 ASENIVSRAVLEAQGSILTNKY---AE----GYPSKR---------Y-YGGCQYVDDIENIAIERAKKLFNVNFVNVQSH 102 (433)
Q Consensus 40 ASEN~~S~~v~~~l~S~l~nky---ae----G~pg~r---------y-y~G~~~~d~iE~la~~~a~~lF~a~~anvqp~ 102 (433)
T Consensus 58 s~kn~avd~~m~PLGSCTM-K~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~L----q~~L~~ITG~DavsLQP~ 132 (496)
T COG1003 58 SQKDLAVDRGMIPLGSCTM-KLNPKAEMKPATWPEFANIHPFQPEEQVQGYLELIYEL----QEWLKEITGMDAVSLQPN 132 (496)
T ss_pred HHCCCCCCCCCCCCCCCCC-CCCCHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHH----HHHHHHHCCCCEEECCCC
T ss_conf 7514352347617764521-55841211222460044249999868889999999999----999997409762640678
Q ss_pred HHHHHHHHHHHHH----HCC----CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 1679999999983----154----87488123344841114766543333322013665832356598999999986046
Q gi|254780349|r 103 SGSQMNQGVFLAL----MHP----GDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEYNP 174 (433)
Q Consensus 103 SG~~An~av~~AL----l~p----GD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~kP 174 (433)
T Consensus 133 AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGT-----NPASAam~G~~VV~V~~~~-~G~VDlddLk~k~~~~~A 206 (496)
T COG1003 133 AGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGT-----NPASAAMAGFKVVVVKCDE-NGNVDLDDLRAKAEDNLA 206 (496)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC-----CHHHHHHCCCEEEEEECCC-CCCCCHHHHHHHHCCCEE
T ss_conf 7764156789999999997588777679831655689-----8656765485599983289-887169999987413115
Q ss_pred CEEEEECCCC-CCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-CCEEEECCCCCCCCCCCE------EE
Q ss_conf 6789705524-353637999988641797899186201244320001232200-235674045652256744------89
Q gi|254780349|r 175 KLIIVGGTAY-SRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH-CHIVTTTTHKSLRGPRGG------LI 246 (433)
Q Consensus 175 klIi~G~S~y-~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~-ADvvt~sTHKtl~GPrgG------iI 246 (433)
T Consensus 207 alMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG-~~--rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPv 283 (496)
T COG1003 207 ALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVG-LA--RPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPV 283 (496)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHC-CC--CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCE
T ss_conf 8886168645450451999999999729989844754352522-55--66556563577522311025888899987760
Q ss_pred EECCCCHHHHCCH-------H--H----CH---HHHHHH-HHHHHHHHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 8336205650166-------4--6----54---322344-55666899999999735648-9999999988899999986
Q gi|254780349|r 247 MTNHADLAKKINS-------A--I----FP---GLQGGP-FMHSIAAKAVAFGEALSSEF-RDYAKQIVLNSQALAKKLQ 308 (433)
Q Consensus 247 ~~~~~e~~~~i~~-------a--v----fP---g~qg~~-~~~~iaa~aval~Ea~~~~f-~~Ya~qvv~NA~~La~~L~ 308 (433)
T Consensus 284 gVk~-~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~ 362 (496)
T COG1003 284 GVKA-HLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLK 362 (496)
T ss_pred EHHH-HCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2585-512338987334777530036787764226514557616899999999987577888989999984799999754
Q ss_pred HCCCCCCCCCC--CCCEEEECCC----CCCCCHHHHHHHHHHCCEEE
Q ss_conf 16852334588--8981263166----55676799999888567188
Q gi|254780349|r 309 FLGFDIVSGGT--DNHLMLVDLR----SKRMTGKRAESILGRVSITC 349 (433)
Q Consensus 309 ~~G~~vv~ggT--d~H~vlvdl~----~~~~~G~~a~~~Le~~gI~~ 349 (433)
T Consensus 363 ~-~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHa 408 (496)
T COG1003 363 G-YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHA 408 (496)
T ss_pred H-CCCCCCCCCCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCC
T ss_conf 0-275554788761158996056667642983899999987258888