HHsearch alignment for GI: 254780349 and conserved domain: COG1103
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only].
Probab=99.00 E-value=5.2e-08 Score=76.29 Aligned_cols=322 Identities=18% Similarity=0.236 Sum_probs=193.4
Q ss_pred HHCCCCCC--CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HHHHCCCCCEECCCHHHH-
Q ss_conf 83888104--30102989999830510288657988875336006799999999999----998718863010000167-
Q gi|254780349|r 33 NDEIQLIA--SENIVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIER----AKKLFNVNFVNVQSHSGS- 105 (433)
Q Consensus 33 ~~~l~LiA--SEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~----a~~lF~a~~anvqp~SG~- 105 (433)
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~-E~gDGYSv----CD~-C~~Grldei~kPpI~~F~~dlaeFlg~D~--~R~t~GAR 86 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALL-EWGDGYSV----CDF-CLEGRLDEITKPPIKDFLEDLAEFLGMDE--VRVTAGAR 86 (382)
T ss_pred CCCCCCCHHHCCCCCCHHHHHHHH-HHCCCCCH----HHH-HCCCCCCCCCCCCHHHHHHHHHHHHCCCE--EEECCCCH
T ss_conf 176034723406868799999999-86488634----431-04574110258858889998898719863--44236512
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH------CCCEEEE
Q ss_conf 9999999983154874881233448411147665433333220136658323565989999999860------4667897
Q gi|254780349|r 106 QMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAIEY------NPKLIIV 179 (433)
Q Consensus 106 ~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~~~------kPklIi~ 179 (433)
T Consensus 87 e~KfavMhal~~~gd~vV~D~~a---HYttyvAAEragl~v~eVp-~tg~Pey~i~~e~y~~viee~~~~~g~~~~lall 162 (382)
T COG1103 87 EAKFAVMHALCKEGDWVVVDSLA---HYTTYVAAERAGLNVAEVP-NTGYPEYKITPEGYAEVIEEVKDEGGDPPALALL 162 (382)
T ss_pred HHHHHHHHHHCCCCCEEEECCCC---HHHHHHHHHHCCCEEEECC-CCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 56799999751589889974742---2788999986397589667-8999845766888899999998624898448999
Q ss_pred E--CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC--CCEEEECCCCCCC--CCCCEEEEECCCCH
Q ss_conf 0--5524353637999988641797899186201244320001232200--2356740456522--56744898336205
Q gi|254780349|r 180 G--GTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH--CHIVTTTTHKSLR--GPRGGLIMTNHADL 253 (433)
Q Consensus 180 G--~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~--ADvvt~sTHKtl~--GPrgGiI~~~~~e~ 253 (433)
T Consensus 163 Th~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~G-----rmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~--eE~ 235 (382)
T COG1103 163 THVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVG-----RMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMS--EEW 235 (382)
T ss_pred ECCCCCCCCCHHHHHHHHHHHHCCCCEEEECCEEEC-----CCCCCCCCCCCCEEEECCCCCHHCCCCEEEEEEH--HHH
T ss_conf 635777577221678999998729956851210223-----2113665567877972485300114870477513--677
Q ss_pred HHHCCHH--H-CHH---------HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCC
Q ss_conf 6501664--6-543---------22344556668999999997356489999999988899999986168-523345888
Q gi|254780349|r 254 AKKINSA--I-FPG---------LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLG-FDIVSGGTD 320 (433)
Q Consensus 254 ~~~i~~a--v-fPg---------~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G-~~vv~ggTd 320 (433)
T Consensus 236 ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eR-----Vkr-WdeEv~kaR~fv~elEkigg~~qlG~rPk 309 (382)
T COG1103 236 AEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVER-----VKR-WDEEVEKARWFVAELEKIGGVKQLGERPK 309 (382)
T ss_pred HHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHCCHHHHHH-----HHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 789986315446533256614324684389987407799999-----987-88999999999999997430887177976
Q ss_pred CCEEEECCCC-CC-------CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCH---HHHHCCCCHHHHHHHHH
Q ss_conf 9812631665-56-------7679999988856718803789989999888985122466---67307999899999999
Q gi|254780349|r 321 NHLMLVDLRS-KR-------MTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTP---SGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 321 ~H~vlvdl~~-~~-------~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~---aiTtrG~~e~em~~iA~ 389 (433)
T Consensus 310 ~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~-----------------GI~~G~Tk~~K~svyGl~~Eqve~V~~ 372 (382)
T COG1103 310 NHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIH-----------------GIQPGQTKYFKLSVYGLSWEQVEYVVD 372 (382)
T ss_pred CCCEEEECCCHHHHHHHHCCCCCEEEHHHHHHCCCC-----------------CCCCCCEEEEEEEEECCCHHHHHHHHH
T ss_conf 564255337128999875767854668988765866-----------------506675137888750577999999999
Q ss_pred HHHHHHH
Q ss_conf 9999960
Q gi|254780349|r 390 LIAQILD 396 (433)
Q Consensus 390 li~~~L~ 396 (433)
T Consensus 373 afkeI~e 379 (382)
T COG1103 373 AFKEIAE 379 (382)
T ss_pred HHHHHHH
T ss_conf 9999998