HHsearch alignment for GI: 254780349 and conserved domain: COG1921
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism].
Probab=99.25 E-value=6.8e-09 Score=82.45 Aligned_cols=341 Identities=17% Similarity=0.143 Sum_probs=180.2
Q ss_pred HHHHHHHHHH---HHCCCCCC-------CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999---83888104-------30102989999830510288657988875336-0067999999999999987
Q gi|254780349|r 23 SLIGQESCRQ---NDEIQLIA-------SENIVSRAVLEAQGSILTNKYAEGYPSKRYYG-GCQYVDDIENIAIERAKKL 91 (433)
Q Consensus 23 ~~i~~e~~rq---~~~l~LiA-------SEN~~S~~v~~~l~S~l~nkyaeG~pg~ryy~-G~~~~d~iE~la~~~a~~l 91 (433)
T Consensus 7 ~~~~~~i~~~~~l~~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~-~~v~----Le~~l~~g~~~~R~~-~~~~~~~~~ 80 (395)
T COG1921 7 AATVREIKSRLRLRRVINAIGTVLMTNLGRSLYSPEAIEAMKEAMR-APVE----LETDLKTGKRGARLT-ELAELLCGL 80 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHC-CCCE----EEEECCCCHHHHHHH-HHHHHHHCC
T ss_conf 6678999977503666524322100127876679899999999850-5430----356401231357779-999998366
Q ss_pred CCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 18863010000167999999998315487488123344-84111476654333332201366583235659899999998
Q gi|254780349|r 92 FNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDS-GGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDMHEIESLAI 170 (433)
Q Consensus 92 F~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~-GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~~~~~a~ 170 (433)
T Consensus 81 ~~aea~~i-vnnn~aAVll~~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~Ev--G~tn~t~~~d~---~-~AI 153 (395)
T COG1921 81 TGAEAAAI-VNNNAAAVLLTLNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEV--GTTNRTHLKDY---E-LAI 153 (395)
T ss_pred CCHHHEEE-ECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEEE--CCCCCCCHHHH---H-HHH
T ss_conf 44033256-78828999998763205771799713115688998667999719779981--56576778889---9-885
Q ss_pred HHCCCEEE-EECCCCCCC--CCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC---CCC-CCEEEECCCCCCCCCCC
Q ss_conf 60466789-705524353--637999988641797899186201244320001232---200-23567404565225674
Q gi|254780349|r 171 EYNPKLII-VGGTAYSRV--WDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP---VPH-CHIVTTTTHKSLRGPRG 243 (433)
Q Consensus 171 ~~kPklIi-~G~S~y~~~--~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P---l~~-ADvvt~sTHKtl~GPrg 243 (433)
T Consensus 154 ne~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~-~v~--~e~~l~~~la~GaDLV~~SgdKllgGPqa 230 (395)
T COG1921 154 NENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGA-LVD--KEPDLREALALGADLVSFSGDKLLGGPQA 230 (395)
T ss_pred CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCC-CCC--CCCCHHHHHHCCCCEEEEECCHHCCCCCC
T ss_conf 458705899950366614645599999999876997799667763-003--55445688860797899754011279854
Q ss_pred EEEEECCCCHHHHCCHHH--CHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH----HHHHHHHHHHCCCCCCCC
Q ss_conf 489833620565016646--54322344556668999999997356489999999988----899999986168523345
Q gi|254780349|r 244 GLIMTNHADLAKKINSAI--FPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN----SQALAKKLQFLGFDIVSG 317 (433)
Q Consensus 244 GiI~~~~~e~~~~i~~av--fPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N----A~~La~~L~~~G~~vv~g 317 (433)
T Consensus 231 Gii~GkK-elI~~lq~~~l~Ralrv~---K~tla~l~~aLe~y~~~~~~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~~ 306 (395)
T COG1921 231 GIIVGKK-ELIEKLQSHPLKRALRVD---KETLAALEAALELYLQPEILGERLRTLRLLTQPAEALLAQAGRLAVVELDP 306 (395)
T ss_pred CEEECHH-HHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
T ss_conf 3374249-999999762133433158---276899999999870801344355788743127999998753045530266
Q ss_pred CCCCCEEEECCC--CCCCC-HHHHHHHHHHCC-EEEECCCCCCCCC-CCCCCCCCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 888981263166--55676-799999888567-1880378998999-9888985122466673079998999999
Q gi|254780349|r 318 GTDNHLMLVDLR--SKRMT-GKRAESILGRVS-ITCNKNSIPFDPE-SPFITSGIRLGTPSGTTRGFKEKDFEYI 387 (433)
Q Consensus 318 gTd~H~vlvdl~--~~~~~-G~~a~~~Le~~g-I~~Nkn~iP~D~~-~~~~~sGiRlGT~aiTtrG~~e~em~~i 387 (433)
T Consensus 307 ~g--~~~~v~i~~~e~~ig~g~l~~~~~~~~~~~i~~~~~~--~~~~~~~l~~~~~~l~~~ii~r~~~~~~~~~~ 377 (395)
T COG1921 307 TG--DRLVVKIVSSESQIGSGSLPDELLPSLALIITPKYGI--RGGKLEGLPRRLRTLRVPIIARIAERILWLDL 377 (395)
T ss_pred CC--CCEEEEECHHHHCCCCCCCHHHHCCCCCEEEECCCCC--CCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHH
T ss_conf 78--7548996014421576524577545654388426653--32035422354424787556403234678988