HHsearch alignment for GI: 254780349 and conserved domain: COG1982
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism].
Probab=99.74 E-value=1.4e-15 Score=129.00 Aligned_cols=267 Identities=16% Similarity=0.183 Sum_probs=191.0
Q ss_pred HHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCC
Q ss_conf 99999998718863010000167999999998315487488123344841114766543333322013665832---356
Q gi|254780349|r 83 IAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKE---DGL 159 (433)
Q Consensus 83 la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~---~~~ 159 (433)
T Consensus 74 eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvd---RN~HKSi~~glilaGa~Pvyl~p~~np~~gi~gg 150 (557)
T COG1982 74 EAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVD---RNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGG 150 (557)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEC---CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
T ss_conf 9999999986888629997782289999998603899989965---8763788889987488327841777854465378
Q ss_pred CCHHHHHHHHHHHCC--C-EEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCC-C-CCEEEECC
Q ss_conf 598999999986046--6-78970552435363799998864179789918620124432000123220-0-23567404
Q gi|254780349|r 160 LDMHEIESLAIEYNP--K-LIIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVP-H-CHIVTTTT 234 (433)
Q Consensus 160 ID~d~~~~~a~~~kP--k-lIi~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~-~-ADvvt~sT 234 (433)
T Consensus 151 I~~~~~~~al~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tqS~ 230 (557)
T COG1982 151 IPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQST 230 (557)
T ss_pred CCHHHHHHHHHHCHHHHHEEEEECCCCCEEEECHHHHHHHHHHCCCEEEHHHCCCCCCCCCCCCCCHHHHCCCEEEEEEH
T ss_conf 69899879998471304068896485324760599999997531866888645774335555574114545743898105
Q ss_pred CCCCCC-CCCEEEEECC--CCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH----HHHHH
Q ss_conf 565225-6744898336--2056501664654322344556668999999997356489999999988899----99998
Q gi|254780349|r 235 HKSLRG-PRGGLIMTNH--ADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQA----LAKKL 307 (433)
Q Consensus 235 HKtl~G-PrgGiI~~~~--~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~----La~~L 307 (433)
T Consensus 231 HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~A-r~~~~~~G~~l~~~~~~~~i~~r~~~~~~~ 309 (557)
T COG1982 231 HKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVA-RMQEGNAGRELWQEVIDEAIDFRKALRRLI 309 (557)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4421234366787508876577899999999880679558999889999-987543347888888999999999999988
Q ss_pred HHC-CCCCCCCC-------------C-CCCE------EEECCCCCCCCHHHHHHHHHHCCEEEECCC
Q ss_conf 616-85233458-------------8-8981------263166556767999998885671880378
Q gi|254780349|r 308 QFL-GFDIVSGG-------------T-DNHL------MLVDLRSKRMTGKRAESILGRVSITCNKNS 353 (433)
Q Consensus 308 ~~~-G~~vv~gg-------------T-d~H~------vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn~ 353 (433)
T Consensus 310 ~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~~ 376 (557)
T COG1982 310 NEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEETG 376 (557)
T ss_pred HHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECC
T ss_conf 7648864026655577533222122344542036607999657789739999999997588145317