HHsearch alignment for GI: 254780349 and conserved domain: KOG1401

Probab=94.70  E-value=0.43  Score=28.13  Aligned_cols=193  Identities=20%  Similarity=0.175  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHHHHHH------CCCC--EEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC---CCC---CCCCHHHHH
Q ss_conf             016799999999831------5487--48812334484111476654333-33220136658---323---565989999
Q gi|254780349|r  102 HSGSQMNQGVFLALM------HPGD--SFMGLSLDSGGHLTHGSSVNMSG-KWFKAIPYNVR---KED---GLLDMHEIE  166 (433)
Q Consensus       102 ~SG~~An~av~~ALl------~pGD--~Il~~~l~~GGHlshg~~~~~~g-~~~~~~~y~~d---~~~---~~ID~d~~~  166 (433)
T Consensus       123 nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsy-----HG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~  197 (433)
T KOG1401         123 NSGTEANETALKFARKFTGKKHPEKKTKFIAFENSY-----HGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALE  197 (433)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC-----CCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHH
T ss_conf             697289999999999863534776641289985675-----776236667523466688887779853530558899999


Q ss_pred             HHHHHHCC---CEEE---EECCCCCCCCC---HHHHHHHHHHCCCEEEECCCCHH----HHHHH-HCCCCCCCCCCEEEE
Q ss_conf             99986046---6789---70552435363---79999886417978991862012----44320-001232200235674
Q gi|254780349|r  167 SLAIEYNP---KLII---VGGTAYSRVWD---WERFRSIADSIGAYLMADISHIS----GLVVG-GQHPSPVPHCHIVTT  232 (433)
Q Consensus       167 ~~a~~~kP---klIi---~G~S~y~~~~d---~~~l~eIa~~~ga~l~~D~aH~~----GLIa~-g~~~~Pl~~ADvvt~  232 (433)
T Consensus       198 k~~e~~~~~IaAvIvEPiqGaGG-~~p~~peFl~~l~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~---~~PDI~t~  273 (433)
T KOG1401         198 KLFESHKGEIAAVIVEPIQGAGG-IIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFG---VTPDITTV  273 (433)
T ss_pred             HHHHHCCCCEEEEEEECCCCCCC-CCCCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCHHHHHHHHC---CCCCEEEE
T ss_conf             99984788568999713457888-656988999999999861596699603431765355277888858---69760231


Q ss_pred             CCCCCCCC--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHH---HHHHHHHCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             04565225--67448983362056501664654322344556668999---99999735648999999998889999998
Q gi|254780349|r  233 TTHKSLRG--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKA---VAFGEALSSEFRDYAKQIVLNSQALAKKL  307 (433)
Q Consensus       233 sTHKtl~G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~a---val~Ea~~~~f~~Ya~qvv~NA~~La~~L  307 (433)
T Consensus       274 --aK~L~gGlPigA~~v~-~-kV~~~i~~~~-~l~hg~Tf~gnpLacs~~~~~l~~l~~pe~~k---~vs~~~k~L~~~l  345 (433)
T KOG1401         274 --AKPLGGGLPIGATGVR-D-KVAEMISPGD-HLYHGGTFSGNPLACSAGIKVLDELKDPETLK---NVSKIGKELRKLL  345 (433)
T ss_pred             --HHHCCCCCEEEEEEEH-H-HHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH---HHHHHHHHHHHHH
T ss_conf             --0203688515788655-7-7886518888-65557665788055548899999871889999---8988878999999


Q ss_pred             HHCC
Q ss_conf             6168
Q gi|254780349|r  308 QFLG  311 (433)
Q Consensus       308 ~~~G  311 (433)
T Consensus       346 ~e~~  349 (433)
T KOG1401         346 DEYL  349 (433)
T ss_pred             HHHH
T ss_conf             9986