HHsearch alignment for GI: 254780349 and conserved domain: PRK00854
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed.
Probab=98.84 E-value=5.6e-06 Score=62.18 Aligned_cols=284 Identities=16% Similarity=0.181 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHC---------C-CCEEEECCCCCCCCCCCCCCCC---CCCC-C
Q ss_conf 99999999998718863010000167999999998315---------4-8748812334484111476654---3333-3
Q gi|254780349|r 80 IENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMH---------P-GDSFMGLSLDSGGHLTHGSSVN---MSGK-W 145 (433)
Q Consensus 80 iE~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~---------p-GD~Il~~~l~~GGHlshg~~~~---~~g~-~ 145 (433)
T Consensus 88 ~~~l~~~-l~~~~~~~~v-~f~~SGsEAve~AiklAr~~~~~~~g~~tgr~~ii~~~~~y-----HG~t~~~~s~s~~~~ 160 (404)
T PRK00854 88 LAPLYEE-LAALTGSHKV-LPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNF-----HGRTLSIVGFSTDPD 160 (404)
T ss_pred HHHHHHH-HHHCCCCCEE-EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC-----CCCCCCCCCCCCCCC
T ss_conf 9999999-9740376848-85587799999999999998765037878985599964566-----786013543467743
Q ss_pred CCCCCCCCCCCCCCC---CHHHHHHHHHHHCCCE--EEE----ECC--CCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH
Q ss_conf 220136658323565---9899999998604667--897----055--24353637999988641797899186201244
Q gi|254780349|r 146 FKAIPYNVRKEDGLL---DMHEIESLAIEYNPKL--IIV----GGT--AYSRVWDWERFRSIADSIGAYLMADISHISGL 214 (433)
Q Consensus 146 ~~~~~y~~d~~~~~I---D~d~~~~~a~~~kPkl--Ii~----G~S--~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL 214 (433)
T Consensus 161 ~~~~~~~~~~~~~~~p~~d~~~l~~~---~~~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T-Gf 236 (404)
T PRK00854 161 ARGGFGPFAPGFRVVPFGDAAALEAA---ITPNTVAFLIEPIQGEAGVIIPPAGYFRRVRELCTANNVTLILDEIQT-GL 236 (404)
T ss_pred CCCCCCCCCCCCEEECCCCHHHHHHH---HCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC-CC
T ss_conf 35688899998155056668999986---398748999917757789617998999999999997076445750001-78
Q ss_pred -HHHHCCCC-CCCC-CCEEEECCCCCCC-C--CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHH
Q ss_conf -32000123-2200-2356740456522-5--674489833620565016646543223445566689999999973564
Q gi|254780349|r 215 -VVGGQHPS-PVPH-CHIVTTTTHKSLR-G--PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSE 288 (433)
Q Consensus 215 -Ia~g~~~~-Pl~~-ADvvt~sTHKtl~-G--PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~ 288 (433)
T Consensus 237 GRtG~~fa~e~~gv~PDii~~g--Kgl~gG~~Pl~av~~~-~-~i~~~~~~~~h~~T~~gnpla~aaa~a~l--~~i~~- 309 (404)
T PRK00854 237 GRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSN-S-EVLGVLRPGQHGSTFGGNPLACAVARAAL--RVLVE- 309 (404)
T ss_pred CCCCCCCHHHHCCCCCCEEEEC--CCCCCCCCCCCEEECC-H-HHHHHCCCCCCCCCCCCCHHHHHHHHHHH--HHHHH-
T ss_conf 6355741455424897989756--4445887653202047-9-99950679887788898989999999999--99986-
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf 8999999998889999998616852334588898126-316655676799999888567188037899899998889851
Q gi|254780349|r 289 FRDYAKQIVLNSQALAKKLQFLGFDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGI 367 (433)
Q Consensus 289 f~~Ya~qvv~NA~~La~~L~~~G~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGi 367 (433)
T Consensus 310 -e~l~~~~~~~g~~l~~~L~~l~~~~i~~VRG~Glm~gve~~~~~~~~~~~~~~~~~~Gll~~~~----------~~~~i 378 (404)
T PRK00854 310 -EGMIENAAEQGAYFLEGLRAIRGNIVREVRGRGLMLAVELEPEAGGARQYCEALKARGLLAKDT----------HDHTI 378 (404)
T ss_pred -CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHCCEEECCC----------CCCEE
T ss_conf -5899999999999999998504897276644455999998556677999999999799598748----------99989
Q ss_pred CCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 22466673079998999999999999960
Q gi|254780349|r 368 RLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 368 RlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
T Consensus 379 r~~PPL~----it~~eid~~l~~l~~~La 403 (404)
T PRK00854 379 RLAPPLV----ITREQVDWAVSQIAKVLA 403 (404)
T ss_pred EEECCCC----CCHHHHHHHHHHHHHHHC
T ss_conf 9979957----899999999999999966