HHsearch alignment for GI: 254780349 and conserved domain: PRK04073

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional.
Probab=98.96  E-value=1.1e-06  Score=67.12  Aligned_cols=283  Identities=15%  Similarity=0.203  Sum_probs=146.9

Q ss_pred             HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH---------CC-CCEEEECCCCCCCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf             99999871886301000016799999999831---------54-87488123344841114766543333-322013665
Q gi|254780349|r   85 IERAKKLFNVNFVNVQSHSGSQMNQGVFLALM---------HP-GDSFMGLSLDSGGHLTHGSSVNMSGK-WFKAIPYNV  153 (433)
Q Consensus        85 ~~~a~~lF~a~~anvqp~SG~~An~av~~ALl---------~p-GD~Il~~~l~~GGHlshg~~~~~~g~-~~~~~~y~~  153 (433)
T Consensus        88 ~e~l~~l~~~~~v-~f~~sGseAvE~AlklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~--~~~s~t~~~~~~~~~~p~  164 (396)
T PRK04073         88 YEKVAKLTGKDMV-LPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTM--AAVSLSSEAEYKRGFGPM  164 (396)
T ss_pred             HHHHHHHCCCCEE-EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC--CHHHCCCCCCCCCCCCCC
T ss_conf             9999975283648-9618788899999999999987623788898779997775004532--052226764334577899


Q ss_pred             CCCCCCCCHHHHHHHHHHHCCC--EEEE----ECCCCCCCCC--HHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CC
Q ss_conf             8323565989999999860466--7897----0552435363--7999988641797899186201244-3200012-32
Q gi|254780349|r  154 RKEDGLLDMHEIESLAIEYNPK--LIIV----GGTAYSRVWD--WERFRSIADSIGAYLMADISHISGL-VVGGQHP-SP  223 (433)
Q Consensus       154 d~~~~~ID~d~~~~~a~~~kPk--lIi~----G~S~y~~~~d--~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~P  223 (433)
T Consensus       165 ~~~~~~~p~~d~~~l~~~~~~~~AAvi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~  243 (396)
T PRK04073        165 LPGIKKIPYGDVEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDW  243 (396)
T ss_pred             CCCCEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEE-CCCCCCCCCCEEC
T ss_conf             998232575216678861489756999989877789778998999999999998399352663410-7886576300100


Q ss_pred             CCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf             200-23567404565225---67448983362056501664654322344556668999999997356489999999988
Q gi|254780349|r  224 VPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN  299 (433)
Q Consensus       224 l~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N  299 (433)
T Consensus       244 ~gv~PDiv~~g--K~l~gG~~P~~av-~~~~-~i~~~~~~~~h~~T~~gnpla~aaa~a~--L~~~~~--~~l~~~~~~~  315 (396)
T PRK04073        244 DNVKPDMYILG--KALGGGVFPISCV-AANR-DILGVFTPGSHGSTFGGNPLACAVSIAA--LDVIEE--EKLPERSLEL  315 (396)
T ss_pred             CCCCCCEEECC--CCCCCCCCCEEEE-ECCH-HHHHHCCCCCCCCCCCCCHHHHHHHHHH--HHHHHH--CCHHHHHHHH
T ss_conf             46898801025--3455787760589-6078-9996166899760548898999999999--999987--5799999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf             89999998616852334588898126-31665567679999988856718803789989999888985122466673079
Q gi|254780349|r  300 SQALAKKLQFLGFDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRG  378 (433)
Q Consensus       300 A~~La~~L~~~G~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG  378 (433)
T Consensus       316 g~~l~~~L~~l~~~~i~~vRG~Gl~~giel~~---~~~~~~~~~~~~Gll~~~~----------~~~~ir~~-PpL~---  378 (396)
T PRK04073        316 GEYFKEQLKEIDNPMIKEVRGRGLFIGVELNE---PARPYCEALKEEGLLCKET----------HETVIRFA-PPLV---  378 (396)
T ss_pred             HHHHHHHHHHCCCCCEEECCCCEEEEEEEECC---CHHHHHHHHHHCCEEEEEC----------CCCEEEEE-CCCC---
T ss_conf             99999999825899748723377999999587---5899999999499799527----------99989997-9936---


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q ss_conf             998999999999999960
Q gi|254780349|r  379 FKEKDFEYIGELIAQILD  396 (433)
Q Consensus       379 ~~e~em~~iA~li~~~L~  396 (433)
T Consensus       379 it~~eid~~l~~l~~~L~  396 (396)
T PRK04073        379 ISKEELDWALEKIKAVLS  396 (396)
T ss_pred             CCHHHHHHHHHHHHHHHC
T ss_conf             899999999999999859