HHsearch alignment for GI: 254780349 and conserved domain: PRK04073
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional.
Probab=98.96 E-value=1.1e-06 Score=67.12 Aligned_cols=283 Identities=15% Similarity=0.203 Sum_probs=146.9
Q ss_pred HHHHHHHCCCCCEECCCHHHHHHHHHHHHHHH---------CC-CCEEEECCCCCCCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 99999871886301000016799999999831---------54-87488123344841114766543333-322013665
Q gi|254780349|r 85 IERAKKLFNVNFVNVQSHSGSQMNQGVFLALM---------HP-GDSFMGLSLDSGGHLTHGSSVNMSGK-WFKAIPYNV 153 (433)
Q Consensus 85 ~~~a~~lF~a~~anvqp~SG~~An~av~~ALl---------~p-GD~Il~~~l~~GGHlshg~~~~~~g~-~~~~~~y~~ 153 (433)
T Consensus 88 ~e~l~~l~~~~~v-~f~~sGseAvE~AlklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~--~~~s~t~~~~~~~~~~p~ 164 (396)
T PRK04073 88 YEKVAKLTGKDMV-LPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTM--AAVSLSSEAEYKRGFGPM 164 (396)
T ss_pred HHHHHHHCCCCEE-EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCC--CHHHCCCCCCCCCCCCCC
T ss_conf 9999975283648-9618788899999999999987623788898779997775004532--052226764334577899
Q ss_pred CCCCCCCCHHHHHHHHHHHCCC--EEEE----ECCCCCCCCC--HHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CC
Q ss_conf 8323565989999999860466--7897----0552435363--7999988641797899186201244-3200012-32
Q gi|254780349|r 154 RKEDGLLDMHEIESLAIEYNPK--LIIV----GGTAYSRVWD--WERFRSIADSIGAYLMADISHISGL-VVGGQHP-SP 223 (433)
Q Consensus 154 d~~~~~ID~d~~~~~a~~~kPk--lIi~----G~S~y~~~~d--~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~P 223 (433)
T Consensus 165 ~~~~~~~p~~d~~~l~~~~~~~~AAvi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~fa~e~ 243 (396)
T PRK04073 165 LPGIKKIPYGDVEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDW 243 (396)
T ss_pred CCCCEECCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEE-CCCCCCCCCCEEC
T ss_conf 998232575216678861489756999989877789778998999999999998399352663410-7886576300100
Q ss_pred CCC-CCEEEECCCCCCCC---CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 200-23567404565225---67448983362056501664654322344556668999999997356489999999988
Q gi|254780349|r 224 VPH-CHIVTTTTHKSLRG---PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN 299 (433)
Q Consensus 224 l~~-ADvvt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N 299 (433)
T Consensus 244 ~gv~PDiv~~g--K~l~gG~~P~~av-~~~~-~i~~~~~~~~h~~T~~gnpla~aaa~a~--L~~~~~--~~l~~~~~~~ 315 (396)
T PRK04073 244 DNVKPDMYILG--KALGGGVFPISCV-AANR-DILGVFTPGSHGSTFGGNPLACAVSIAA--LDVIEE--EKLPERSLEL 315 (396)
T ss_pred CCCCCCEEECC--CCCCCCCCCEEEE-ECCH-HHHHHCCCCCCCCCCCCCHHHHHHHHHH--HHHHHH--CCHHHHHHHH
T ss_conf 46898801025--3455787760589-6078-9996166899760548898999999999--999987--5799999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCC
Q ss_conf 89999998616852334588898126-31665567679999988856718803789989999888985122466673079
Q gi|254780349|r 300 SQALAKKLQFLGFDIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRG 378 (433)
Q Consensus 300 A~~La~~L~~~G~~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG 378 (433)
T Consensus 316 g~~l~~~L~~l~~~~i~~vRG~Gl~~giel~~---~~~~~~~~~~~~Gll~~~~----------~~~~ir~~-PpL~--- 378 (396)
T PRK04073 316 GEYFKEQLKEIDNPMIKEVRGRGLFIGVELNE---PARPYCEALKEEGLLCKET----------HETVIRFA-PPLV--- 378 (396)
T ss_pred HHHHHHHHHHCCCCCEEECCCCEEEEEEEECC---CHHHHHHHHHHCCEEEEEC----------CCCEEEEE-CCCC---
T ss_conf 99999999825899748723377999999587---5899999999499799527----------99989997-9936---
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 998999999999999960
Q gi|254780349|r 379 FKEKDFEYIGELIAQILD 396 (433)
Q Consensus 379 ~~e~em~~iA~li~~~L~ 396 (433)
T Consensus 379 it~~eid~~l~~l~~~L~ 396 (396)
T PRK04073 379 ISKEELDWALEKIKAVLS 396 (396)
T ss_pred CCHHHHHHHHHHHHHHHC
T ss_conf 899999999999999859