HHsearch alignment for GI: 254780349 and conserved domain: PRK06062

Probab=98.61  E-value=1.4e-05  Score=59.41  Aligned_cols=212  Identities=19%  Similarity=0.193  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHHCCC---EEEE----E--CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCE
Q ss_conf             89999999860466---7897----0--5524353637999988641797899186201244-32000123-2200-235
Q gi|254780349|r  162 MHEIESLAIEYNPK---LIIV----G--GTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHI  229 (433)
Q Consensus       162 ~d~~~~~a~~~kPk---lIi~----G--~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADv  229 (433)
T Consensus       183 l~~l~~~i~~~~~~~iAAvivEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T-G~GRtG~~fa~e~~gv~PDi  261 (434)
T PRK06062        183 LAHLERVIALEGPSTIAAIVLESVPGTAGIMVPPPGYLAGVRELCDRHGIVFIADEVMA-GFGRTGKWFAIEHFDVVPDL  261 (434)
T ss_pred             HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCC-CCCCCCCCCCCCCCCCCCCH
T ss_conf             99999999851999779999478678899866876787689999998595067464322-78766664210058979762


Q ss_pred             EEECCCCCCCC---CCCEEEEECCCCHHHHCCHHHCHH--HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH-HHHH
Q ss_conf             67404565225---674489833620565016646543--22344556668999999997356489999999988-8999
Q gi|254780349|r  230 VTTTTHKSLRG---PRGGLIMTNHADLAKKINSAIFPG--LQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLN-SQAL  303 (433)
Q Consensus       230 vt~sTHKtl~G---PrgGiI~~~~~e~~~~i~~avfPg--~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~N-A~~L  303 (433)
T Consensus       262 v~~--gK~l~gG~~Plsav~~~~--~i~~~~~~~~~~~g~T~~Gnpla~Aaa~a~--L~~i~~~--~l~~~~~~~G~~~l  333 (434)
T PRK06062        262 ITF--AKGVNSGYVPLGGVAISE--AIADTFADRPYPGGLTYSGHPLACAAAVAT--INAMEEE--GIVENAARIGAEVL  333 (434)
T ss_pred             HEE--HHHHCCCCCCEEEEEECH--HHHHHHCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHHC--CHHHHHHHHHHHHH
T ss_conf             101--033148877617887459--999874226756787888987999999999--9999735--89999999999999


Q ss_pred             HHHHHHC--CCCCCCC----CCCCCEEEECCC-------CCC---CCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             9998616--8523345----888981263166-------556---76799999888567188037899899998889851
Q gi|254780349|r  304 AKKLQFL--GFDIVSG----GTDNHLMLVDLR-------SKR---MTGKRAESILGRVSITCNKNSIPFDPESPFITSGI  367 (433)
Q Consensus       304 a~~L~~~--G~~vv~g----gTd~H~vlvdl~-------~~~---~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGi  367 (433)
T Consensus       334 ~~~L~~l~~~~p~v~~VRG~GL~~gielv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-----------gn~i  402 (434)
T PRK06062        334 GPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLVPYGAASAAMAAVVAACKERGLLPFVN-----------GNRI  402 (434)
T ss_pred             HHHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC-----------CCEE
T ss_conf             99999998658986888616626999982264435555544332799999999999799278335-----------9989


Q ss_pred             CCCCHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf             224666730799989999999999999602
Q gi|254780349|r  368 RLGTPSGTTRGFKEKDFEYIGELIAQILDG  397 (433)
Q Consensus       368 RlGT~aiTtrG~~e~em~~iA~li~~~L~~  397 (433)
T Consensus       403 rl~Pp-L~---it~~eid~~l~~l~~al~~  428 (434)
T PRK06062        403 HVVPP-CT---VTEDEVREGLAILDAALAV  428 (434)
T ss_pred             EEECC-CC---CCHHHHHHHHHHHHHHHHH
T ss_conf             99789-23---8899999999999999998