HHsearch alignment for GI: 254780349 and conserved domain: PRK07366
>PRK07366 succinyldiaminopimelate transaminase; Validated.
Probab=99.65 E-value=4.9e-13 Score=111.28 Aligned_cols=336 Identities=19% Similarity=0.214 Sum_probs=199.6
Q ss_pred HHHHHHHHCHHHHHHHHHHHH-HH---HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 764697858999999999999-99---83888104301--0298999983051028865798887533600679999999
Q gi|254780349|r 10 FQQSLIESDPDVFSLIGQESC-RQ---NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENI 83 (433)
Q Consensus 10 ~~~~l~~~Dpei~~~i~~e~~-rq---~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~l 83 (433)
T Consensus 3 ~~~r~~~~~~~~~~~~~~~~~~~~~~G~~vi~l~iG~pdf~~P~~i~~a~~~a~~~~~~~gY~~~---~G~---~~lR~a 76 (388)
T PRK07366 3 FAQRLQPLQSNVFADMDRAKAQARAAGKEVIDLSLGSSDLPAPAHALEAIAQSLQDPSTHGYLLF---HGT---LPFREA 76 (388)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC---CCC---HHHHHH
T ss_conf 55565528948999999999999858998498708689999889999999999809767678987---578---999999
Q ss_pred HHHHHHHHCCCCC---EECCCHHHHH-HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 9999998718863---0100001679-999999983154874881233448411147665433333220136658323-5
Q gi|254780349|r 84 AIERAKKLFNVNF---VNVQSHSGSQ-MNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-G 158 (433)
Q Consensus 84 a~~~a~~lF~a~~---anvqp~SG~~-An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~ 158 (433)
T Consensus 77 Ia~~~~~~~g~~~~pe~~V~~t~G~~~al~~~~~al~~pGD~Vli~~P~Y~~y~---~~~~~~G--~~~~~vpl~~~~~~ 151 (388)
T PRK07366 77 AAAWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLALLNPGDFALLLDPGYPSHA---GGVYLAG--GQIYPMPLRAENDF 151 (388)
T ss_pred HHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHH---HHHHHCC--CEEEEEECCCCCCC
T ss_conf 999999997898898873998478899999999996699998998258776518---9999859--85799754666798
Q ss_pred CCCHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC--CCC---CC
Q ss_conf 659899999998604667897055243-----53637999988641797899186201244320001232--200---23
Q gi|254780349|r 159 LLDMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSP--VPH---CH 228 (433)
Q Consensus 159 ~ID~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P--l~~---AD 228 (433)
T Consensus 152 ~~d~~~l~~~i~-~~tk~iil~~P~NPTG~v~s~~~l~~i~~~a~~~~i~lisDEiY~-~l~~~~~~~~p~~~~~~~~~~ 229 (388)
T PRK07366 152 LPVFADIPTEVL-AQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYV-DLVFDGEVEPPSILQADPEKS 229 (388)
T ss_pred CCCHHHHHHHHH-HCCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHCCEEEECCCEEE-EEEECCCCCCCHHHHCCCCCC
T ss_conf 479999987404-228299985898984668038888889998740550786220214-458668766613542572206
Q ss_pred --EEEECCCCCC--CCCCCEEEEECCCCHHHHCCHH--HCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf --5674045652--2567448983362056501664--654322344556668999999997356489999999988899
Q gi|254780349|r 229 --IVTTTTHKSL--RGPRGGLIMTNHADLAKKINSA--IFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQA 302 (433)
Q Consensus 229 --vvt~sTHKtl--~GPrgGiI~~~~~e~~~~i~~a--vfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~ 302 (433)
T Consensus 230 ~~i~~~S~SK~f~~~G~RiG~~i~~~-~li~~~~~~~~~~~~~~----~~~~~~~a~~al~~~~~~~~~~~~~~~~rr~~ 304 (388)
T PRK07366 230 VSIEFFTLSKSYNMGGFRIGFAIGNA-QLIAALRQIKAVVDFNQ----YRGILNGAIAALTGPQACVQQTVQIFRQRRDA 304 (388)
T ss_pred EEEEEECCCCCCCCCCCEEEEEECCH-HHHHHHHHHHHHCCCCC----HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 17997335325788765189996799-99999999987547654----39999999999968889999999999999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCEEEECCCCC-CCCHHH-HHHHHHHCCEEEECCCCCCCCCCCCCCC---CCCCCC
Q ss_conf 99998616852334588898126316655-676799-9998885671880378998999988898---512246
Q gi|254780349|r 303 LAKKLQFLGFDIVSGGTDNHLMLVDLRSK-RMTGKR-AESILGRVSITCNKNSIPFDPESPFITS---GIRLGT 371 (433)
Q Consensus 303 La~~L~~~G~~vv~ggTd~H~vlvdl~~~-~~~G~~-a~~~Le~~gI~~Nkn~iP~D~~~~~~~s---GiRlGT 371 (433)
T Consensus 305 ~~~~L~~~g~~~~~P-~g~~y~w~~l~~~~~~~~~ef~~~Ll~~~gV~v~----PG~---~Fg~~g~g~iRl~~ 370 (388)
T PRK07366 305 FINALHRIGWPVPLP-EATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAAS----PGS---GFGKSGEGYVRFAL 370 (388)
T ss_pred HHHHHHHCCCEEECC-CEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEE----CCH---HHCCCCCCEEEEEE
T ss_conf 999999779875079-8577997878987889989999999983999997----664---65889998699996