HHsearch alignment for GI: 254780349 and conserved domain: PRK08555
>PRK08555 consensus.
Probab=98.53 E-value=0.00013 Score=52.57 Aligned_cols=180 Identities=22% Similarity=0.249 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCC-CCCCC-CCEEEECCCCCCCC--CCCEEEEECCCCHHHHCCHHHC
Q ss_conf 637999988641797899186201244-3200012-32200-23567404565225--6744898336205650166465
Q gi|254780349|r 188 WDWERFRSIADSIGAYLMADISHISGL-VVGGQHP-SPVPH-CHIVTTTTHKSLRG--PRGGLIMTNHADLAKKINSAIF 262 (433)
Q Consensus 188 ~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~-~Pl~~-ADvvt~sTHKtl~G--PrgGiI~~~~~e~~~~i~~avf 262 (433)
T Consensus 243 ~yl~~l~~lc~~~gillI~DEV~t-GfGRtG~~fa~e~~gv~PDiv~~g--Kgl~~G~Pl~av~~~~e--~~~~~-~~~h 316 (443)
T PRK08555 243 NFFKELKKLADKYGILLIDDEVQM-GLGRTGKMFAIEHFGVEPDIITLA--KALGGGIPIGATIFRAD--LDFKK-PGLH 316 (443)
T ss_pred HHHHHHHHHHHHCCCEEECCCCCC-CCCCCCCCCEECCCCCCCCEEEEC--CCCCCCCCEEEEEEHHH--HCCCC-CCCC
T ss_conf 887899999997494696354412-787024741231688899889977--42448875089998245--35577-7773
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCCCCCCCEEE-ECCCC----C
Q ss_conf 432234455666899999999735648999999998889999998616------852334588898126-31665----5
Q gi|254780349|r 263 PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL------GFDIVSGGTDNHLML-VDLRS----K 331 (433)
Q Consensus 263 Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~------G~~vv~ggTd~H~vl-vdl~~----~ 331 (433)
T Consensus 317 ~~T~~gnpla~aaa~a~--L~~i~-------e~l~~~~~~~g~~l~~~L~~l~~~~~~v~dvRG~Gl~~gielv~~~~~~ 387 (443)
T PRK08555 317 SNTFGGNALASAAGLAV--IEEIK-------EGLLENVQKLGKYFRERLEELKEKYEIIGDVRGLGLAWAIEFVKDRKTK 387 (443)
T ss_pred CCCCCCCHHHHHHHHHH--HHHHH-------HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCC
T ss_conf 76888548999999999--99999-------7799999999999999999988619977872326679999982377656
Q ss_pred CCCHHH---HHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 676799---99988856718803789989999888985122466673079998999999999999960
Q gi|254780349|r 332 RMTGKR---AESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGELIAQILD 396 (433)
Q Consensus 332 ~~~G~~---a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~li~~~L~ 396 (433)
T Consensus 388 ~~~~~~~~~i~~~~~~~Gll~~~~g----------~n~ir~~-PPL~---it~~eid~~~~~l~~al~ 441 (443)
T PRK08555 388 EPNPKLRDRVVVEAFKRGLILLGCG----------KSAIRLI-PPLI---ISEEEAKIGLEILEEAIK 441 (443)
T ss_pred CCCHHHHHHHHHHHHHCCEEEEECC----------CCEEEEE-CCCC---CCHHHHHHHHHHHHHHHH
T ss_conf 7798999999999997890997379----------9989997-7943---889999999999999996