HHsearch alignment for GI: 254780349 and conserved domain: PRK08960
>PRK08960 hypothetical protein; Provisional.
Probab=99.70 E-value=1.6e-13 Score=114.65 Aligned_cols=361 Identities=14% Similarity=0.086 Sum_probs=217.3
Q ss_pred HHHHHHHHCH-HHHHHHHHHHHHH---HHCCCCCCCCC--CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 7646978589-9999999999999---83888104301--0298999983051028865798887533600679999999
Q gi|254780349|r 10 FQQSLIESDP-DVFSLIGQESCRQ---NDEIQLIASEN--IVSRAVLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENI 83 (433)
Q Consensus 10 ~~~~l~~~Dp-ei~~~i~~e~~rq---~~~l~LiASEN--~~S~~v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~l 83 (433)
T Consensus 5 ~s~r~~~i~~s~~~~i~~~a~~~~~~G~~vi~l~~G~pdf~~p~~i~~a~~~a~~~~----~---~~Y~~~~G~~~LRea 77 (387)
T PRK08960 5 YSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAAPIVAAGQAALAAG----H---TRYTAARGLPALREA 77 (387)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCC----C---CCCCCCCCHHHHHHH
T ss_conf 889984499679999999999999779980788994899988999999999998538----9---988998772999999
Q ss_pred HHHHHHHHCCCC--CEECCCHHH-HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 999999871886--301000016-79999999983154874881233448411147665433333220136658323-56
Q gi|254780349|r 84 AIERAKKLFNVN--FVNVQSHSG-SQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED-GL 159 (433)
Q Consensus 84 a~~~a~~lF~a~--~anvqp~SG-~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~-~~ 159 (433)
T Consensus 78 ia~~~~~~~g~~~~~d~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Yp~~~~---~~~~~~~--~~~~vp~~~~~~~~ 152 (387)
T PRK08960 78 IAGFYAQRYGLDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRH---FLRLVEG--AAQLVPVGPDTRYQ 152 (387)
T ss_pred HHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH---HHHHHCC--EEEEEECCCCCCCC
T ss_conf 999999985899984328980866999999999956999879981787655289---9998537--44999757544778
Q ss_pred CCHHHHHHHHHHHCCCEEEEECCCCC-----CCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCC--EEEE
Q ss_conf 59899999998604667897055243-----5363799998864179789918620124432000123220023--5674
Q gi|254780349|r 160 LDMHEIESLAIEYNPKLIIVGGTAYS-----RVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPHCH--IVTT 232 (433)
Q Consensus 160 ID~d~~~~~a~~~kPklIi~G~S~y~-----~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~AD--vvt~ 232 (433)
T Consensus 153 ~~~~~le~~~~-~~~~~iil~nP~NPTG~v~s~~~l~~l~~~a~~~~~~vI~DEiY-~~l~~~~~~~s~~~~~~~~i~i~ 230 (387)
T PRK08960 153 LTPALVERHWD-SDSVGALVASPANPTGTLLSRDELAALSQALKARGGHLVVDEIY-HGLTYGVDAASVLEVDDSAFVLN 230 (387)
T ss_pred CCHHHHHHHCC-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC-HHHCCCCCCCCCCCCCCCEEEEE
T ss_conf 89999997278-78729997689898863146899999999876239779984461-44125898653113678779995
Q ss_pred CCCCCC--CCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 045652--256744898336205650166465432234455666899999999735648999999998889999998616
Q gi|254780349|r 233 TTHKSL--RGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFL 310 (433)
Q Consensus 233 sTHKtl--~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~ 310 (433)
T Consensus 231 S~SK~~~~~G~RiG~~v~p~-~~i~~~~~~~~~~~~~~~~~~Q~aa~~a-l~~~~~~~~~~~~~~~~~rrd~l~~~l~~~ 308 (387)
T PRK08960 231 SFSKYFGMTGWRLGWLVAPP-AAVPELEKLAQNLYISASSMAQHAALAC-FEPETIAILEARRAEFQRRRDFLLPALREL 308 (387)
T ss_pred ECCCCCCCCCCEEEEEEECH-HHHHHHHHHHHHCCCCCCCHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 06432557763058999889-9999999999854377987999999999-621559999999999999999999999975
Q ss_pred CCCCCCCCCCCCEEEECCCCCCCCHHHH-HHHHHHCCEEEECCCCCCCCCCCCCCC-CCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 8523345888981263166556767999-998885671880378998999988898-51224666730799989999999
Q gi|254780349|r 311 GFDIVSGGTDNHLMLVDLRSKRMTGKRA-ESILGRVSITCNKNSIPFDPESPFITS-GIRLGTPSGTTRGFKEKDFEYIG 388 (433)
Q Consensus 311 G~~vv~ggTd~H~vlvdl~~~~~~G~~a-~~~Le~~gI~~Nkn~iP~D~~~~~~~s-GiRlGT~aiTtrG~~e~em~~iA 388 (433)
T Consensus 309 ~~~~~~~P~G~~y~w~~~~~~~~d~~~~~~~ll~~~gV~v~----PG~~Fg~~~~~~~~Rls~~------~~~~~l~eal 378 (387)
T PRK08960 309 GFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFT----PGLDFGRHQAGHHVRFAYT------QSLPRLQEAV 378 (387)
T ss_pred CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEE----CCHHHCCCCCCCEEEEEEC------CCHHHHHHHH
T ss_conf 99604589866699788888899999999999986999997----4722089999998999976------9999999999
Q ss_pred HHHHHHHH
Q ss_conf 99999960
Q gi|254780349|r 389 ELIAQILD 396 (433)
Q Consensus 389 ~li~~~L~ 396 (433)
T Consensus 379 ~RL~~~Lk 386 (387)
T PRK08960 379 ERIARGLR 386 (387)
T ss_pred HHHHHHHC
T ss_conf 99999966