HHsearch alignment for GI: 254780349 and conserved domain: TIGR00699
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase; InterPro: IPR004631 4-aminobutyrate aminotransferase eukaryotic (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known eukaryotic examples of the enzyme. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=96.93 E-value=0.0049 Score=41.71 Aligned_cols=277 Identities=17% Similarity=0.183 Sum_probs=147.1
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCCEECCCHHHHHHHHHHHHHH------HCCC--CE-
Q ss_conf 3051028865798887533600679999999999999871--88630100001679999999983------1548--74-
Q gi|254780349|r 53 QGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLF--NVNFVNVQSHSGSQMNQGVFLAL------MHPG--DS- 121 (433)
Q Consensus 53 l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF--~a~~anvqp~SG~~An~av~~AL------l~pG--D~- 121 (433)
T Consensus 89 ~a~~LinRPALGnfp~~---------~l~~~~~~g~~k~aPKg~~~v~~~~-aG~dane~AfK~af~yYr~~~RGGp~~~ 158 (469)
T TIGR00699 89 MATTLINRPALGNFPSK---------DLAKILKSGILKVAPKGQDSVYRAM-AGSDANELAFKAAFMYYRSKQRGGPERD 158 (469)
T ss_pred HHHHHHCCCCCCCCCHH---------HHHHHHCCCCHHHCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 57886447301467667---------9999854881232452103011446-6642678999999999983589888753
Q ss_pred ---------------------EEECCCCCCCCC------CCCCCC---CC-C----CCCCCCCCCCCCCC--------CC
Q ss_conf ---------------------881233448411------147665---43-3----33322013665832--------35
Q gi|254780349|r 122 ---------------------FMGLSLDSGGHL------THGSSV---NM-S----GKWFKAIPYNVRKE--------DG 158 (433)
Q Consensus 122 ---------------------Il~~~l~~GGHl------shg~~~---~~-~----g~~~~~~~y~~d~~--------~~ 158 (433)
T Consensus 159 Fs~eE~~s~m~N~~PG~P~~siLSF~~aFHGRlfGsLsTT~SKpiHKlD~PaF~WP~A~FP~LkYPLeE~~~~N~~Ee~r 238 (469)
T TIGR00699 159 FSEEENESCMVNQAPGSPDLSILSFKAAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVEENAKEEQR 238 (469)
T ss_pred CCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 11788776431687558507888523431034444200034776031786577746777876678702325754558889
Q ss_pred CCCHHHHHHHHHHH-CCCEE----EE------ECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCC---CCCC
Q ss_conf 65989999999860-46678----97------05524353637999988641797899186201244320001---2322
Q gi|254780349|r 159 LLDMHEIESLAIEY-NPKLI----IV------GGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQH---PSPV 224 (433)
Q Consensus 159 ~ID~d~~~~~a~~~-kPklI----i~------G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~---~~Pl 224 (433)
T Consensus 239 C--L~~vE~L~~~~~~pkrtVaA~IvEPIQSEGGDNHAS~~Ff~KLr~i~~k~~v~FivDEVQTGvGaTGklWAHe~W~L 316 (469)
T TIGR00699 239 C--LEEVEDLIKKWHKPKRTVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKLWAHEHWNL 316 (469)
T ss_pred H--HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 9--99999999731798615888886243478885343378889999999885956899645508788633123002741
Q ss_pred CC-CCEEEECCCCCCCCCCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Q ss_conf 00-23567404565225674489833620565016646543223445566689999999973564899999999888999
Q gi|254780349|r 225 PH-CHIVTTTTHKSLRGPRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQAL 303 (433)
Q Consensus 225 ~~-ADvvt~sTHKtl~GPrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~L 303 (433)
T Consensus 317 ~~P~D~vtFSKK-----~qtAGyFFH~~~lrPn~pYr~FNTW~GdP~r~l~~~~i~~--e-I~--~~~L~~n~~~~Gd~L 386 (469)
T TIGR00699 317 DDPPDMVTFSKK-----FQTAGYFFHDPALRPNKPYRQFNTWMGDPSRALILREIIQ--E-IK--RKDLLNNVAAVGDYL 386 (469)
T ss_pred CCCCCCEEECHH-----HHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--H-HH--HHHHHHHHHHHHHHH
T ss_conf 113850220456-----4127642367356888440003544577889999998887--6-42--257788899876788
Q ss_pred HHHHHHC------CCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEECC
Q ss_conf 9998616------852334588898126316655676799999888567188037
Q gi|254780349|r 304 AKKLQFL------GFDIVSGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCNKN 352 (433)
Q Consensus 304 a~~L~~~------G~~vv~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~Nkn 352 (433)
T Consensus 387 y~GLe~L~~~YP~~~~nlRGKGrGTFiawD~p~~a-~Rd~l~~~~r~~Gvn~GGc 440 (469)
T TIGR00699 387 YTGLEDLQKKYPEKVQNLRGKGRGTFIAWDTPDEA-KRDKLLLKARLNGVNIGGC 440 (469)
T ss_pred HHHHHHHHHHCCHHHHCCCCCCCCCEEECCCCCHH-HHHHHHHHHCCCCEEECCC
T ss_conf 99899999750134403446764215740498878-8899999622382576265