HHsearch alignment for GI: 254780349 and conserved domain: TIGR01140
>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860 L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=94.98 E-value=0.37 Score=28.61 Aligned_cols=280 Identities=19% Similarity=0.243 Sum_probs=174.1
Q ss_pred CCCCCCCCC-HH-HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC------EECCCHHHHHHHH
Q ss_conf 104301029-89-999830510288657988875336006799999999999998718863------0100001679999
Q gi|254780349|r 38 LIASENIVS-RA-VLEAQGSILTNKYAEGYPSKRYYGGCQYVDDIENIAIERAKKLFNVNF------VNVQSHSGSQMNQ 109 (433)
Q Consensus 38 LiASEN~~S-~~-v~~~l~S~l~nkyaeG~pg~ryy~G~~~~d~iE~la~~~a~~lF~a~~------anvqp~SG~~An~ 109 (433)
T Consensus 10 FsAninPlgpP~S~~aa~~~aLd~--------~~rYPD~dY~hlrqA~----------AdH~q~~~dwvl~gnG~~e~i~ 71 (349)
T TIGR01140 10 FSANINPLGPPASVKAALAAALDA--------LERYPDDDYIHLRQAL----------ADHHQVAADWVLAGNGELESIR 71 (349)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHH--------HHCCCCCCHHHHHHHH----------HHHHCCCCCCEECCCCCHHHHH
T ss_conf 434578888760204589874278--------7608884318999998----------6541256012545997278889
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C--CHHHHHHHHHHHCC--CEEEEECCCC
Q ss_conf 99998315487488123344841114766543333322013665832356-5--98999999986046--6789705524
Q gi|254780349|r 110 GVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGL-L--DMHEIESLAIEYNP--KLIIVGGTAY 184 (433)
Q Consensus 110 av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~-I--D~d~~~~~a~~~kP--klIi~G~S~y 184 (433)
T Consensus 72 la~~t~~~~Gd~~~V~~P~F~e---YgR~~~~~Gae~~ti~w~~~~~~~W~~~~dPseiA-~l~A~~s~h~~lilctPnN 147 (349)
T TIGR01140 72 LAAETLVSRGDAVLVVAPAFAE---YGRELELAGAELKTIRWSLDEADGWRVLRDPSEIA-LLDAVTSEHDLLILCTPNN 147 (349)
T ss_pred HHHHHCCCCCCEEEEECCCCHH---HHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHH-HHCCCCCCCCEEEEECCCC
T ss_conf 9886147888757870887026---79999856981223457731688874557645665-4126883313531117676
Q ss_pred C--CCCCHHHHHHHH---HHCCCEEEECCCCHHHHHHH----HCCCCCCCCCCE-EEECCCC--CCCCCCCEEEEECCCC
Q ss_conf 3--536379999886---41797899186201244320----001232200235-6740456--5225674489833620
Q gi|254780349|r 185 S--RVWDWERFRSIA---DSIGAYLMADISHISGLVVG----GQHPSPVPHCHI-VTTTTHK--SLRGPRGGLIMTNHAD 252 (433)
Q Consensus 185 ~--~~~d~~~l~eIa---~~~ga~l~~D~aH~~GLIa~----g~~~~Pl~~ADv-vt~sTHK--tl~GPrgGiI~~~~~e 252 (433)
T Consensus 148 PtG~l~~r~~l~A~a~rc~~~N~~LllDEA-F~dF~pPG~E~~l~p~l~~~P~~~vlRSLTKfy~lPGLRlGylva~~Da 226 (349)
T TIGR01140 148 PTGDLLERDALRALADRCKAVNIELLLDEA-FLDFLPPGEETSLVPSLKDTPNVVVLRSLTKFYALPGLRLGYLVAVDDA 226 (349)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCCCCHHHCCCCEEEECCHHHHHCCHHHHHHHHHCCCHH
T ss_conf 989862247899999888874046666556-5157898644343413326897899711155402502445455516617
Q ss_pred HHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HHHHHHHHC-CCCCCCCCCCCCEEEECCCC
Q ss_conf 5650166465432234455666899999999735648999999998889-999998616-85233458889812631665
Q gi|254780349|r 253 LAKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQ-ALAKKLQFL-GFDIVSGGTDNHLMLVDLRS 330 (433)
Q Consensus 253 ~~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~-~La~~L~~~-G~~vv~ggTd~H~vlvdl~~ 330 (433)
T Consensus 227 ~la~~r~~r~p-----W~vnalAaaag~~al-~~sef~q~tw~wl~~erar~~qaL~~lP~l~v~P--s~anfLLl~~~~ 298 (349)
T TIGR01140 227 LLARLRAARRP-----WSVNALAAAAGAAAL-RDSEFRQETWRWLAEERARLRQALADLPLLDVYP--SRANFLLLKVER 298 (349)
T ss_pred HHHHHHHHCCC-----CCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCEEEECCC
T ss_conf 89999974289-----987768999999987-6678999998743667789999997178875588--887611454589
Q ss_pred CCCCHHHHHHHHHHCCEEEE
Q ss_conf 56767999998885671880
Q gi|254780349|r 331 KRMTGKRAESILGRVSITCN 350 (433)
Q Consensus 331 ~~~~G~~a~~~Le~~gI~~N 350 (433)
T Consensus 299 ~~~d--l~~~llt~~~IliR 316 (349)
T TIGR01140 299 EDVD--LQEELLTKERILIR 316 (349)
T ss_pred CCHH--HHHHHHHHCCCCHH
T ss_conf 8688--99999874341001