HHsearch alignment for GI: 254780349 and conserved domain: TIGR03372
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.28 E-value=0.00065 Score=47.77 Aligned_cols=267 Identities=19% Similarity=0.205 Sum_probs=125.3
Q ss_pred CHHHHHHHHHHHHHH---HCC-CC-EEEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC---CCHHHHHHHHHH
Q ss_conf 001679999999983---154-87-4881233448411147665433333-22013665832356---598999999986
Q gi|254780349|r 101 SHSGSQMNQGVFLAL---MHP-GD-SFMGLSLDSGGHLTHGSSVNMSGKW-FKAIPYNVRKEDGL---LDMHEIESLAIE 171 (433)
Q Consensus 101 p~SG~~An~av~~AL---l~p-GD-~Il~~~l~~GGHlshg~~~~~~g~~-~~~~~y~~d~~~~~---ID~d~~~~~a~~ 171 (433)
T Consensus 140 ~nSGSEAvE~AiKlAr~y~~~~Gk~~ii~~~~syHG~-T~g-a~s~t~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~ 217 (442)
T TIGR03372 140 CNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGK-SLG-ALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNE 217 (442)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-CCC-CCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHH
T ss_conf 3886799999999999973268981899991677874-757-03024784335788789998255578999999999998
Q ss_pred HC-----CCEEEEE------CCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHH-HHHHCCCC-CCCC-CCEEEECCCCC
Q ss_conf 04-----6678970------5524353637999988641797899186201244-32000123-2200-23567404565
Q gi|254780349|r 172 YN-----PKLIIVG------GTAYSRVWDWERFRSIADSIGAYLMADISHISGL-VVGGQHPS-PVPH-CHIVTTTTHKS 237 (433)
Q Consensus 172 ~k-----PklIi~G------~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GL-Ia~g~~~~-Pl~~-ADvvt~sTHKt 237 (433)
T Consensus 218 ~~~~~~~iAaviiEPiqg~gG~~~p~~~yl~~lr~lc~~~gvllI~DEVqt-GfGRTG~~fa~e~~gV~PDIvt~--gKg 294 (442)
T TIGR03372 218 CKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILCL--AKA 294 (442)
T ss_pred HHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCC-CCCCCCCCHHHHCCCCCCCHHHH--HHH
T ss_conf 875599789999846777778744999999999999998497032362122-79847783376548999976865--454
Q ss_pred CCC---CCCEEEEECCCCHHHHCCHHHCHHHHHHHHHHHHHHHHHHH--HHHHCHHHHHHHHHHHHHHHHHHHH----HH
Q ss_conf 225---67448983362056501664654322344556668999999--9973564899999999888999999----86
Q gi|254780349|r 238 LRG---PRGGLIMTNHADLAKKINSAIFPGLQGGPFMHSIAAKAVAF--GEALSSEFRDYAKQIVLNSQALAKK----LQ 308 (433)
Q Consensus 238 l~G---PrgGiI~~~~~e~~~~i~~avfPg~qg~~~~~~iaa~aval--~Ea~~~~f~~Ya~qvv~NA~~La~~----L~ 308 (433)
T Consensus 295 LggG~~Pi~av~~~-~-~i~~~~~~~--~~~h~sTf~Gnpla~aaalavL~~i~~------~~l~~~~~~~G~~l~~~L~ 364 (442)
T TIGR03372 295 LGGGVMPIGATIAT-E-AVFSVLFDN--PFLHTTTFGGNPLACAAALATINELLE------KNLPAQAAIKGDFLLDGFQ 364 (442)
T ss_pred HCCCCCCEEEEEEC-H-HHHHHHHCC--CCCCCCCCCCCHHHHHHHHHHHHHHHH------CCHHHHHHHHHHHHHHHHH
T ss_conf 15887762689750-9-998776248--975478889899999999999999986------5699999999999999999
Q ss_pred HC--CC-CCCCCCCCCCEEE-ECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHH
Q ss_conf 16--85-2334588898126-31665567679999988856718803789989999888985122466673079998999
Q gi|254780349|r 309 FL--GF-DIVSGGTDNHLML-VDLRSKRMTGKRAESILGRVSITCNKNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDF 384 (433)
Q Consensus 309 ~~--G~-~vv~ggTd~H~vl-vdl~~~~~~G~~a~~~Le~~gI~~Nkn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em 384 (433)
T Consensus 365 ~L~~~~p~~V~dVRG~GLm~giE~~~~-~~~~~~~~~~~~~gvl~~~~~~--------~~~~iri~PPL~----it~eei 431 (442)
T TIGR03372 365 QLAAEYPDLIIEARGKGLLMAIEFRDN-EIGYAFAKELFQQNILVAGTLN--------NAKSIRIEPPLT----ITIEQC 431 (442)
T ss_pred HHHHHCCCCEEEEEECCEEEEEEECCC-HHHHHHHHHHHHCCCEEEECCC--------CCCEEEEECCCC----CCHHHH
T ss_conf 998768781668564538999997881-6799999999978979985589--------989899988950----899999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999996
Q gi|254780349|r 385 EYIGELIAQIL 395 (433)
Q Consensus 385 ~~iA~li~~~L 395 (433)
T Consensus 432 d~~i~~l~~aL 442 (442)
T TIGR03372 432 ALVIKAAKDAL 442 (442)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999869