HHsearch alignment for GI: 254780349 and conserved domain: TIGR03576
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.32 E-value=1.1e-09 Score=88.07 Aligned_cols=265 Identities=21% Similarity=0.232 Sum_probs=162.5
Q ss_pred HHHHHHHHCCCC-CEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 999999871886-3010000167999999998315487488123344841114766543333322013665832356598
Q gi|254780349|r 84 AIERAKKLFNVN-FVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKEDGLLDM 162 (433)
Q Consensus 84 a~~~a~~lF~a~-~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~ 162 (433)
T Consensus 59 ~~~~g~~HlgG~~e~~v~~NRTSsailAtIlaL~~~~~~Vvh~vPe~paHPSI~rsc~lagae-------------y~E~ 125 (346)
T TIGR03576 59 VQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAE-------------YFES 125 (346)
T ss_pred HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEECCCC-------------EEEC
T ss_conf 999999873998325777456269999999983578870589787878999730200514871-------------4750
Q ss_pred HHHHHHHHHHCCCEEEE-ECCCCCCCC---CHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCC--CCC-CCEEEECCC
Q ss_conf 99999998604667897-055243536---37999988641797899186201244320001232--200-235674045
Q gi|254780349|r 163 HEIESLAIEYNPKLIIV-GGTAYSRVW---DWERFRSIADSIGAYLMADISHISGLVVGGQHPSP--VPH-CHIVTTTTH 235 (433)
Q Consensus 163 d~~~~~a~~~kPklIi~-G~S~y~~~~---d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~P--l~~-ADvvt~sTH 235 (433)
T Consensus 126 d~~~el~~~d~~slvviTgstmd~~vi~~d~~k~vI~~Ak~~~a~V~vDDAsGARv--R~L~gq~~al~lGADLvVTS~D 203 (346)
T TIGR03576 126 DELSELKKIDGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARV--RRLYGQPPALDLGADLVVTSTD 203 (346)
T ss_pred CCHHHHCCCCCCCEEEEECCCCCCEECCHHHHHHHHHHHHHCCCEEEEECCCCCCH--HHHCCCCCCCCCCCCEEEEEHH
T ss_conf 66776276788718999378777300457889999999874698499854888751--6651999865556426884002
Q ss_pred CCCCCCCCEEEEECCCCHHHHCCHHHC-HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 652256744898336205650166465-4322344556668999999997356489999999988899999986168523
Q gi|254780349|r 236 KSLRGPRGGLIMTNHADLAKKINSAIF-PGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQIVLNSQALAKKLQFLGFDI 314 (433)
Q Consensus 236 Ktl~GPrgGiI~~~~~e~~~~i~~avf-Pg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qvv~NA~~La~~L~~~G~~v 314 (433)
T Consensus 204 KlM~GPR~GlLaG~~-eLV~ki~~~~~~~Gl--Eaq~Pi~aAmv~aLe~-f~~-------~~l~~a~~r~~~~~l~~~~~ 272 (346)
T TIGR03576 204 KLMDGPRGGLLAGRK-ELVDKIKSVGEQFGL--EAQAPLLAAVVRALEE-FEL-------SRIRDAFKRKEEVYLRLFDK 272 (346)
T ss_pred HCCCCCCCCEECCCH-HHHHHHHHHHHHCCC--CCCCCHHHHHHHHHHC-CCH-------HHHHHHHHHHHHHHHHHHHC
T ss_conf 126677541122888-999999999875277--7784159999999970-799-------99999999999988765303
Q ss_pred C-CCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEE-CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 3-45888981263166556767999998885671880-378998999988898512246667307999899999999
Q gi|254780349|r 315 V-SGGTDNHLMLVDLRSKRMTGKRAESILGRVSITCN-KNSIPFDPESPFITSGIRLGTPSGTTRGFKEKDFEYIGE 389 (433)
Q Consensus 315 v-~ggTd~H~vlvdl~~~~~~G~~a~~~Le~~gI~~N-kn~iP~D~~~~~~~sGiRlGT~aiTtrG~~e~em~~iA~ 389 (433)
T Consensus 273 l~~e~TptGf~ik~~~~e~-~~~~~~~LL~~ygIiTIta~Gmpgaskt------lR~d--------~~skDAeri~~ 334 (346)
T TIGR03576 273 LNVERTPTGFVIKGVEEEK-LIEIGLDLLRNYGIITITAVGMPGASKT------LRFD--------LAAKDAERIGD 334 (346)
T ss_pred CCCCCCCCEEEEECCCHHH-HHHHHHHHHHHCCEEEEECCCCCCCCCE------EEEE--------EECCCHHHHCH
T ss_conf 5743278537985656888-8999999999769489834778887632------6876--------20251655157