HHsearch alignment for GI: 254780349 and conserved domain: pfam01276
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=99.82 E-value=4.4e-18 Score=146.41 Aligned_cols=268 Identities=18% Similarity=0.171 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---
Q ss_conf 99999999987188630100001679999999983154874881233448411147665433333220136658323---
Q gi|254780349|r 81 ENIAIERAKKLFNVNFVNVQSHSGSQMNQGVFLALMHPGDSFMGLSLDSGGHLTHGSSVNMSGKWFKAIPYNVRKED--- 157 (433)
Q Consensus 81 E~la~~~a~~lF~a~~anvqp~SG~~An~av~~ALl~pGD~Il~~~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~--- 157 (433)
T Consensus 68 I~eAq~~aA~~fga~~t~flvnGsT~g~~a~i~a~~~~Gd~Vlv~---RN~HkSv~~al~l~g~~Pvyl-~p~~~~~gi~ 143 (417)
T pfam01276 68 IKEAQKYAARVFGADKSYFVVNGTSGANKTVGMAVCTPGDTVLID---RNCHKSIHHALMMSGATPVYL-EPTRNAYGII 143 (417)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEE---CCCHHHHHHHHHHCCCEEEEE-CCCCCCCCCC
T ss_conf 999999999983999369984683099999999743899989971---641899999999869858995-3642434661
Q ss_pred -----CCCCHHHHHHHHHHHC----CCE-EEEECCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCC-
Q ss_conf -----5659899999998604----667-89705524353637999988641797899186201244320001232200-
Q gi|254780349|r 158 -----GLLDMHEIESLAIEYN----PKL-IIVGGTAYSRVWDWERFRSIADSIGAYLMADISHISGLVVGGQHPSPVPH- 226 (433)
Q Consensus 158 -----~~ID~d~~~~~a~~~k----Pkl-Ii~G~S~y~~~~d~~~l~eIa~~~ga~l~~D~aH~~GLIa~g~~~~Pl~~- 226 (433)
T Consensus 144 ~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~PtY~G~~~di~~i~~~~h~~~~~llvDEAhGah~~F~plp~~a~~~g 223 (417)
T pfam01276 144 GGIPLHEFQEETIKEALAEVPPAKGPRLAVITNGTYDGTIYNAKEIVDTLGHLSDYILFDSAWVGYEQFIPIYADASPMG 223 (417)
T ss_pred CCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCC
T ss_conf 58882545999999999858765685089998999870652899999998633987999788752024687833466567
Q ss_pred CC-------EEEECCCCCCCCC-CCEEEEECCCC-H-HHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 23-------5674045652256-74489833620-5-6501664654322344556668999999997356489999999
Q gi|254780349|r 227 CH-------IVTTTTHKSLRGP-RGGLIMTNHAD-L-AKKINSAIFPGLQGGPFMHSIAAKAVAFGEALSSEFRDYAKQI 296 (433)
Q Consensus 227 AD-------vvt~sTHKtl~GP-rgGiI~~~~~e-~-~~~i~~avfPg~qg~~~~~~iaa~aval~Ea~~~~f~~Ya~qv 296 (433)
T Consensus 224 ad~~~~~~~~vvqS~HKtL~altQ~s~Lh~~~~~~~~~~~~~~~l~~~qTTSPsY~lmASLD~ar~~m~~~~G~~l~~~~ 303 (417)
T pfam01276 224 GDNVNDPGIIVTQSVHKLLAAFSQASQIHKKDSHIVNHKRFNEAFMMHTSTSPFYPIVASLDVAAAMMEGNSGRRLWQES 303 (417)
T ss_pred CCCCCCCCEEEEEEHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88666772279861111354304343212167877899999999997738874899999999999997535549999999
Q ss_pred HHHHHHHHHHHHHC----CCCCC-----CC-----------------------CCCCCEEEE---------CCCCCCCCH
Q ss_conf 98889999998616----85233-----45-----------------------888981263---------166556767
Q gi|254780349|r 297 VLNSQALAKKLQFL----GFDIV-----SG-----------------------GTDNHLMLV---------DLRSKRMTG 335 (433)
Q Consensus 297 v~NA~~La~~L~~~----G~~vv-----~g-----------------------gTd~H~vlv---------dl~~~~~~G 335 (433)
T Consensus 304 i~~a~~~R~~i~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~hg~~~~~~~~~~lDptKltI~t~g~~~~g~~~~~GisG 383 (417)
T pfam01276 304 LERAIEFRKEIKTLNDGEFFRPWNPEIVDGKECWPFHPGEKWHGFEGYDDNQYFLDPIKLTILTPGIDETGEYEEFGVPA 383 (417)
T ss_pred HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCH
T ss_conf 99999999999864578522036710047710102476532135555555542577856999807868776333239779
Q ss_pred HHHHHHHHHCCEEEECC
Q ss_conf 99999888567188037
Q gi|254780349|r 336 KRAESILGRVSITCNKN 352 (433)
Q Consensus 336 ~~a~~~Le~~gI~~Nkn 352 (433)
T Consensus 384 ~~v~~~Lre~gI~~E~~ 400 (417)
T pfam01276 384 TIVAKYLREHGIVPEKT 400 (417)
T ss_pred HHHHHHHHHCCCEEEEC
T ss_conf 99999999869889866