HHsearch alignment of GI: 254780350 and MMDB domain: 3d2y_A_179-261

>3d2y_A (A:179-261) N-acetylmuramoyl-L-alanine amidase AMID; zinc amidase, PGRP, peptidoglycan recognizing protein, AMPD; HET: AH0; 1.75A {Escherichia coli str} PDB: 2bh7_A 2bgx_A* 3d2z_A

Probab=97.06  E-value=0.0022  Score=40.17  Aligned_cols=60  Identities=18%  Similarity=0.013  Sum_probs=49.8

Q ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHH
Q ss_conf             14688882489999999981986656787764578999999999998088-87870299999884
Q gi|254780350|r  102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAM  165 (431)
Q Consensus       102 L~~G~~~~~V~~Lr~RL~~~Gdl~~~~~~~~~yD~~l~~AVk~FQ~rhGL-~~DGvig~~Tl~aL  165 (431)
                      ...+...+.|..|+..|..-||-.    .++.||+.+...|++||...-= ..||+.|.+|.+-|
T Consensus        13 ~~~~~~~~~v~~lq~~L~~YGY~i----~~g~~d~~t~~vi~AFQ~HFRP~~~dG~~DaeT~AiL   73 (83)
T 3d2y_A           13 GRAPHTPVDTASLLELLARYGYDV----KPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIA   73 (83)
T ss_dssp             TCCTTCBCCHHHHHHHHHHHTCCC----CSSCCHHHHHHHHHHHHHHHCTTCCSCCCBHHHHHHH
T ss_pred             HHCCCCCHHHHHHHHHHHHHCEEC----CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
T ss_conf             530146156899999999848534----5466705677999998324276256782789999999