HHsearch results for GI: 254780350 and protein with PDBid: 1slm_A
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=98.00 E-value=8.9e-06 Score=53.98 Aligned_cols=109 Identities=20% Similarity=0.209 Sum_probs=72.2
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCC--CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf 82489999999981986656787--7645789999999999980888787029999988448988988898640775303
Q gi|254780350|r 108 SVSVQRLRERLIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185 (431)
Q Consensus 108 ~~~V~~Lr~RL~~~Gdl~~~~~~--~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~~~~r~~qi~~nler~r~ 185 (431)
...+..+++=|..-|||+..... ....+..+.+|||.||+-.||++||++|.+|++.|..| |+ .
T Consensus 11 ~~~~~~~~~yL~~~gyl~~~~~~~~~~~~~~~~~~ai~~~Q~~~~L~~TG~lD~~T~~~m~~p-------------RC-G 76 (255)
T 1slm_A 11 DTSMNLVQKYLENYYDLKKDVKQFVRRKDSGPVVKKIREMQKFLGLEVTGKLDSDTLEVMRKP-------------RC-G 76 (255)
T ss_dssp -----CHHHHHHHHSCCCCC---------CHHHHHHHHHHHHHTTCCCCSSCCHHHHHHTTSC-------------BC-S
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC-------------CC-C
T ss_conf 447999999999818999875422344446899999999999739997565399999988578-------------88-9
Q ss_pred CCCCCCCCHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 55567652345420452489999888555541231388777785542100389844877887667777777776
Q gi|254780350|r 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259 (431)
Q Consensus 186 l~~~~~~~~~v~VNip~~~l~~~e~g~~~~~~~viVGk~~~~TP~~~~~i~~iv~NP~W~vP~sI~~~eilpk~ 259 (431)
.+ +.. ..+...|.+.+. +..+++-+.|-+..++.+.++..+--.+
T Consensus 77 ~p--D~~-----------------------~~~~~~~~~kW~----k~~lTy~i~~~~~~l~~~~v~~~i~~Af 121 (255)
T 1slm_A 77 VP--DVG-----------------------HFRTFPGIPKWR----KTHLTYRIVNYTPDLPKDAVDSAVEKAL 121 (255)
T ss_dssp SC--SSS-----------------------CCSSCCCCSSCS----CSEEEEEECCCCTTSCHHHHHHHHHHHH
T ss_pred CC--CCC-----------------------CCCCCCCCCCCC----CCCCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 98--865-----------------------443157898765----6886667646899999899999999999