HHSEARCH alignment of GI: 254780350 and SCOP domain: d2nr7a1

Alignment
>d2nr7a1 d.2.1.9 (A:1-192) Putative secretion activator PG0293 {Porphyromonas gingivalis [TaxId: 837]}
Probab=95.83  E-value=0.0048  Score=35.61  Aligned_cols=29  Identities=28%  Similarity=0.400  Sum_probs=26.6

Q ss_pred             HHHHHHHHHCCCCCCCCCCHHHHHHHCCC
Q ss_conf             99999999808887870299999884489
Q gi|254780350|r  140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVP  168 (431)
Q Consensus       140 ~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~  168 (431)
                      .|+|-.|+.-|+++||+|||.|++|++.-
T Consensus       101 ~A~k~LQ~algv~~DGiiGp~Tl~Al~~~  129 (192)
T d2nr7a1         101 YGIVIPQRILGVQADGIVGNKTLQAVNSA  129 (192)
T ss_dssp             HHHHHHHHHHTSCCCSCCCHHHHHHHHHS
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHC
T ss_conf             89999998748786677289999999954


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: NMB1012-like
domain: Putative secretion activator PG0293
species: Porphyromonas gingivalis [TaxId: 837]