Query         gi|254780350|ref|YP_003064763.1| hypothetical protein CLIBASIA_01175 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 431
No_of_seqs    220 out of 641
Neff          5.9 
Searched_HMMs 13730
Date          Wed Jun  1 04:37:15 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780350.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1lbua1 a.20.1.1 (A:1-83) Zn2+  99.5 3.4E-15 2.5E-19  110.6   6.7   68  100-167     8-75  (83)
  2 d1zata1 b.160.1.1 (A:339-466)   99.5   3E-14 2.2E-18  104.9   5.3  114  191-358     2-117 (128)
  3 d1y7ma1 b.160.1.1 (A:49-164) H  99.3 8.5E-13 6.2E-17   95.9   6.9  101  191-359     5-105 (116)
  4 d1l6ja1 a.20.1.2 (A:29-105) Ge  98.1 2.5E-06 1.8E-10   55.9   5.9   59  108-168    11-69  (77)
  5 d1su3a1 a.20.1.2 (A:32-98) Fib  97.9 1.1E-05 7.9E-10   52.0   5.8   55  114-168     3-59  (67)
  6 d1slma1 a.20.1.2 (A:16-80) Str  97.9 1.5E-05 1.1E-09   51.1   6.4   55  114-168     2-58  (65)
  7 d1eaka1 a.20.1.2 (A:32-107) Ge  97.7 5.4E-05   4E-09   47.6   7.2   55  110-168    15-69  (76)
  8 d2bgxa1 a.20.1.1 (A:180-260) P  96.2  0.0083 6.1E-07   34.2   6.8   61  102-166    12-73  (81)
  9 d2ikba1 d.2.1.9 (A:1-163) Hypo  96.1  0.0033 2.4E-07   36.6   4.3   53  132-185    80-136 (163)
 10 d2nr7a1 d.2.1.9 (A:1-192) Puta  95.8  0.0048 3.5E-07   35.6   4.3   29  140-168   101-129 (192)
 11 d2ns0a1 a.4.5.76 (A:1-85) Hypo  29.4      14   0.001   14.3   3.4   32  254-285    41-72  (85)
 12 d1kapp2 d.92.1.6 (P:1-246) Met  27.8     2.5 0.00018   18.9  -1.9   30  131-161     3-36  (246)
 13 d1b25a1 a.110.1.1 (A:211-619)   21.4      20  0.0014   13.3   4.8   11    4-14      5-15  (409)
 14 g1apy.1 d.153.1.5 (A:,B:) Glyc  21.2      20  0.0014   13.3   2.1   24  139-162   105-128 (302)
 15 d1ku1a_ a.118.3.1 (A:) ARF gua  20.9      20  0.0015   13.3   3.1   19  136-154    88-106 (211)

No 1  
>d1lbua1 a.20.1.1 (A:1-83) Zn2+ DD-carboxypeptidase, N-terminal domain {Streptomyces albus G [TaxId: 1962]}
Probab=99.55  E-value=3.4e-15  Score=110.64  Aligned_cols=68  Identities=22%  Similarity=0.288  Sum_probs=63.1

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC
Q ss_conf             74146888824899999999819866567877645789999999999980888787029999988448
Q gi|254780350|r  100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV  167 (431)
Q Consensus       100 ~~L~~G~~~~~V~~Lr~RL~~~Gdl~~~~~~~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~  167 (431)
                      ++|++|+++++|..|+++|...|+.......+++||+.+++||++||++|||++||++|+.||++||.
T Consensus         8 ~~L~~G~~g~~V~~lQ~~L~~~g~~~~~~~~dg~fg~~t~~AV~~FQ~~~gL~~dGivg~~T~~~L~~   75 (83)
T d1lbua1           8 GTLSEGSSGEAVRQLQIRVAGYPGTGAQLAIDGQFGPATKAAVQRFQSAYGLAADGIAGPATFNKIYQ   75 (83)
T ss_dssp             SCBCTTCBSHHHHHHHHHTTTCSCTTCCCCCSSBCCHHHHHHHHHHHHHTTSCCSSCBCHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf             78989997089999999998359987876889832889999999999994999988389999999997


No 2  
>d1zata1 b.160.1.1 (A:339-466) L,D-transpeptidase, C-terminal, catalytic domain {Enterococcus faecium [TaxId: 1352]}
Probab=99.45  E-value=3e-14  Score=104.86  Aligned_cols=114  Identities=13%  Similarity=0.110  Sum_probs=86.4

Q ss_pred             CCCHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHCC
Q ss_conf             65234542045248999988855554123138877778554210038984487788766777777777641867787499
Q gi|254780350|r  191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN  270 (431)
Q Consensus       191 ~~~~~v~VNip~~~l~~~e~g~~~~~~~viVGk~~~~TP~~~~~i~~iv~NP~W~vP~sI~~~eilpk~~~dp~yl~~~~  270 (431)
                      +++.+|.|++.+++|.++++|+.+..++|.+|++..+||.....|.....+|.|..+.                      
T Consensus         2 ~~~~~I~Vdl~~q~l~l~~~g~~v~~~~vs~G~~~~~Tp~G~~~I~~k~~~~~~~~~~----------------------   59 (128)
T d1zata1           2 IEDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTPAGVFYVWNKEEDATLKGTN----------------------   59 (128)
T ss_dssp             SCSCEEEEETTTTEEEEEETTEEEEEEECBCBCTTSCCCCEEEECCCCEEEEECCBCC----------------------
T ss_pred             CCCCEEEEECCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCC----------------------
T ss_conf             8871999998679999999999999855679988984777648886412785123455----------------------


Q ss_pred             EEEECCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHCCCC--CCCCCCCCEECCC
Q ss_conf             39993899783502047010445772247268999863148953158876681388983232865--5554115034479
Q gi|254780350|r  271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV--VRFETSGCVRVRN  348 (431)
Q Consensus       271 ~~i~~~~g~~vdp~~i~w~~~~~~~~~~rQ~PGp~NaLG~vkf~f~N~~~iyLHdTP~~~lF~~~--~Ra~ShGCVRv~n  348 (431)
                                                   -.+++.+.-+..+..|.+. .+++|+||.+..+...  .+..|||||||.|
T Consensus        60 -----------------------------~~~~~~~~~~~~~~~~~~~-~~~~hg~~~~~~~~~~~~g~~~ShGCIRl~~  109 (128)
T d1zata1          60 -----------------------------DDGTPYESPVNYWMPIDWT-GVGIHDSDWQPEYGGDLWKTRGSHGCINTPP  109 (128)
T ss_dssp             -------------------------------CCCBCCEEEEEEECSSS-SCEEEECTTCSCCSTTHHHHHCBSSSEEECH
T ss_pred             -----------------------------CCCCCCCCCHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf             -----------------------------7788867603456541687-2013578654432355457878876567698


Q ss_pred             HHHHHHHHHC
Q ss_conf             8999999840
Q gi|254780350|r  349 IIDLDVWLLK  358 (431)
Q Consensus       349 p~~La~~ll~  358 (431)
                      ..  |+||.+
T Consensus       110 ~d--a~~ly~  117 (128)
T d1zata1         110 SV--MKELFG  117 (128)
T ss_dssp             HH--HHHHHH
T ss_pred             HH--HHHHHH
T ss_conf             99--999996


No 3  
>d1y7ma1 b.160.1.1 (A:49-164) Hypothetical protein YkuD, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=99.35  E-value=8.5e-13  Score=95.86  Aligned_cols=101  Identities=20%  Similarity=0.162  Sum_probs=79.6

Q ss_pred             CCCHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHCC
Q ss_conf             65234542045248999988855554123138877778554210038984487788766777777777641867787499
Q gi|254780350|r  191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN  270 (431)
Q Consensus       191 ~~~~~v~VNip~~~l~~~e~g~~~~~~~viVGk~~~~TP~~~~~i~~iv~NP~W~vP~sI~~~eilpk~~~dp~yl~~~~  270 (431)
                      ..+..|.|++.+.+|.++++|+.+..++|.+|+.+++||.....+....                               
T Consensus         5 ~~p~~I~Vd~~~~~l~~~~~g~~v~~~pvs~G~~~~~TP~G~~~i~~k~-------------------------------   53 (116)
T d1y7ma1           5 TIPYHIAVSIGAKTLTLSLNNRVMKTYPIAVGKILTQTPTGEFYIINRQ-------------------------------   53 (116)
T ss_dssp             GCCEEEEEETTTTEEEEEETTEEEEEEECBEEBTTBCCCCEEEEEEEEE-------------------------------
T ss_pred             CCCEEEEEECCCCEEEEEECCEEEEEEEECCCCCCCCCCCEEEEECCCC-------------------------------
T ss_conf             8877999998889999999999999944043789987766666601222-------------------------------


Q ss_pred             EEEECCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHCCCCCCCCCCCCEECCCHH
Q ss_conf             39993899783502047010445772247268999863148953158876681388983232865555411503447989
Q gi|254780350|r  271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII  350 (431)
Q Consensus       271 ~~i~~~~g~~vdp~~i~w~~~~~~~~~~rQ~PGp~NaLG~vkf~f~N~~~iyLHdTP~~~lF~~~~Ra~ShGCVRv~np~  350 (431)
                                                     +.+.+++|..|+.+... ++++|+|+.+..++.   ..|||||||.+  
T Consensus        54 -------------------------------~~~~~~~~~~~~~~~~~-~~~~hg~~~~~~~g~---~~ShGCIrl~~--   96 (116)
T d1y7ma1          54 -------------------------------RNPGGPFGAYWLSLSAA-HYGIHGTNNPASIGK---AVSKGCIRMHN--   96 (116)
T ss_dssp             -------------------------------ECCCGGGTTEEEEESST-TCEEECCSCGGGTTS---EEESSCEECCH--
T ss_pred             -------------------------------CCCCCCCCCEEEEECCC-CCCCCCCCCCCCCCC---CCCCCEECCCH--
T ss_conf             -------------------------------11137765278982167-742212214555798---87997005299--


Q ss_pred             HHHHHHHCC
Q ss_conf             999998404
Q gi|254780350|r  351 DLDVWLLKD  359 (431)
Q Consensus       351 ~La~~ll~~  359 (431)
                      +-|.||.+.
T Consensus        97 ~da~~ly~~  105 (116)
T d1y7ma1          97 KDVIELASI  105 (116)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHC
T ss_conf             999999966


No 4  
>d1l6ja1 a.20.1.2 (A:29-105) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.11  E-value=2.5e-06  Score=55.92  Aligned_cols=59  Identities=27%  Similarity=0.221  Sum_probs=49.4

Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
Q ss_conf             8248999999998198665678776457899999999999808887870299999884489
Q gi|254780350|r  108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP  168 (431)
Q Consensus       108 ~~~V~~Lr~RL~~~Gdl~~~~~~~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~  168 (431)
                      -.++...+.-|...||++..  .....+..+.+|||.||+-.||++||.+|++|+++|+.|
T Consensus        11 ~~d~~~a~~yL~~fGYl~~~--~~~~~~~~~~~AIk~fQ~f~gL~vTG~lD~~T~~~M~~p   69 (77)
T d1l6ja1          11 LTDRQLAEEYLYRYGYTRVA--EMRGESKSLGPALLLLQKQLSLPETGELDSATLKAMRTP   69 (77)
T ss_dssp             CCHHHHHHHHHHHTTCC-------------CHHHHHHHHHHHTCCCCSSCCHHHHHHHTSC
T ss_pred             CCHHHHHHHHHHHCCCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
T ss_conf             10699999999983899877--766451999999999999839998787699999988447


No 5  
>d1su3a1 a.20.1.2 (A:32-98) Fibroblast collagenase (MMP-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.88  E-value=1.1e-05  Score=51.99  Aligned_cols=55  Identities=24%  Similarity=0.207  Sum_probs=44.8

Q ss_pred             HHHHHHHCCCCCCCCCC--CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
Q ss_conf             99999981986656787--76457899999999999808887870299999884489
Q gi|254780350|r  114 LRERLIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP  168 (431)
Q Consensus       114 Lr~RL~~~Gdl~~~~~~--~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~  168 (431)
                      .++=|..-|||+.....  ....+..+.+||+.||+-+||++||.+|++|++.|+.|
T Consensus         3 ~~~YL~~fgyl~~~~~~~~~~~~~~~~~~Aik~fQ~f~~L~~TG~lD~~T~~~M~~P   59 (67)
T d1su3a1           3 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQP   59 (67)
T ss_dssp             HHHHHHHHSCCC------------CHHHHHHHHHHHHTTCCCCSSCCHHHHHHHTSC
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
T ss_conf             999999818999886532244565899999999999829985466699999988778


No 6  
>d1slma1 a.20.1.2 (A:16-80) Stromelysin-1 (MMP-3) {Human (Homo sapiens), fibroblast [TaxId: 9606]}
Probab=97.87  E-value=1.5e-05  Score=51.08  Aligned_cols=55  Identities=27%  Similarity=0.234  Sum_probs=44.2

Q ss_pred             HHHHHHHCCCCCCCCCCC--CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
Q ss_conf             999999819866567877--6457899999999999808887870299999884489
Q gi|254780350|r  114 LRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP  168 (431)
Q Consensus       114 Lr~RL~~~Gdl~~~~~~~--~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~  168 (431)
                      .++=|..-|||+......  ..-+..+.+||+.||+-.||++||.+|++|++.|+.|
T Consensus         2 ~~~YL~~fgyl~~~~~~~~~~~~~~~l~~Ai~~~Q~f~~L~~TG~lD~~T~~~M~~P   58 (65)
T d1slma1           2 VQKYLENYYDLKKDVKQFVRRKDSGPVVKKIREMQKFLGLEVTGKLDSDTLEVMRKP   58 (65)
T ss_dssp             HHHHHHHHSCCCCC---------CHHHHHHHHHHHHHTTCCCCSSCCHHHHHHTTSC
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
T ss_conf             799999808999874300245667999999999999839974255799999988768


No 7  
>d1eaka1 a.20.1.2 (A:32-107) Gelatinase A (MMP-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.72  E-value=5.4e-05  Score=47.64  Aligned_cols=55  Identities=20%  Similarity=0.146  Sum_probs=45.3

Q ss_pred             CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
Q ss_conf             48999999998198665678776457899999999999808887870299999884489
Q gi|254780350|r  110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP  168 (431)
Q Consensus       110 ~V~~Lr~RL~~~Gdl~~~~~~~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~  168 (431)
                      ++....+-|..-|+++....  +  ...+.+||+.||+-.||+++|.+|.+|++.|..|
T Consensus        15 d~e~A~~YL~~fgyl~~~~~--~--~~~l~~ai~~~Q~f~~L~~TG~lD~~T~~~m~~p   69 (76)
T d1eaka1          15 DKELAVQYLNTFYGCPKESC--N--LFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRKP   69 (76)
T ss_dssp             HHHHHHHHHHHHTCCCSSCC--C--HHHHHHHHHHHHHHSSCCCCCSCCHHHHHHHTSC
T ss_pred             CHHHHHHHHHHHCCCCCCCC--C--CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC
T ss_conf             39999999999579986777--5--0799999999999819985355699999988668


No 8  
>d2bgxa1 a.20.1.1 (A:180-260) Probable N-acetylmuramoyl-L-alanine amidase YbjR, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.18  E-value=0.0083  Score=34.16  Aligned_cols=61  Identities=18%  Similarity=0.026  Sum_probs=48.4

Q ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHHC
Q ss_conf             14688882489999999981986656787764578999999999998088-878702999998844
Q gi|254780350|r  102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMN  166 (431)
Q Consensus       102 L~~G~~~~~V~~Lr~RL~~~Gdl~~~~~~~~~yD~~l~~AVk~FQ~rhGL-~~DGvig~~Tl~aLN  166 (431)
                      .+.+.+-.++..+++.|...||--.    .+.+|..+..+|++||.++-= ..||.+|.+|++-|.
T Consensus        12 ~~~~~~~~~~~~~~~~L~k~GY~i~----~~~~~~~~k~vi~AFQrhFRp~~i~G~~D~Et~~Il~   73 (81)
T d2bgxa1          12 GRAPHTPVDTASLLELLARYGYDVK----PDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAE   73 (81)
T ss_dssp             TCCTTCBCCHHHHHHHHHHHTCCCC----TTCCHHHHHHHHHHHHHHHCTTCCSSCCBHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCC----CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf             3477893559999999999099888----7877278899999999873611048857899999999


No 9  
>d2ikba1 d.2.1.9 (A:1-163) Hypothetical protein NMB1012 {Neisseria meningitidis [TaxId: 487]}
Probab=96.06  E-value=0.0033  Score=36.61  Aligned_cols=53  Identities=26%  Similarity=0.388  Sum_probs=37.7

Q ss_pred             CCCCHHH----HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf             6457899----99999999980888787029999988448988988898640775303
Q gi|254780350|r  132 VAFDAYV----ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK  185 (431)
Q Consensus       132 ~~yD~~l----~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~~~~r~~qi~~nler~r~  185 (431)
                      .+||..+    ..|+|-.|+.-|+++||+|||+|+++++.-....+ ...++.+|..+
T Consensus        80 ~~FD~aVN~G~~~A~k~LQ~al~v~vDGiiGp~Tl~Al~~~~~~~l-~~~~~~~R~~~  136 (163)
T d2ikba1          80 QFFDACVNHGYGNAARMLQRAAGVPDDGVIGAVSLKAINSLPENDL-LLRFNAERLVF  136 (163)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHTTSCCSSCCCHHHHHHHHHSCHHHH-HHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHH-HHHHHHHHHHH
T ss_conf             9985734288517999999983865235638888999982496999-99999999999


No 10 
>d2nr7a1 d.2.1.9 (A:1-192) Putative secretion activator PG0293 {Porphyromonas gingivalis [TaxId: 837]}
Probab=95.83  E-value=0.0048  Score=35.61  Aligned_cols=29  Identities=28%  Similarity=0.400  Sum_probs=26.6

Q ss_pred             HHHHHHHHHCCCCCCCCCCHHHHHHHCCC
Q ss_conf             99999999808887870299999884489
Q gi|254780350|r  140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVP  168 (431)
Q Consensus       140 ~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~  168 (431)
                      .|+|-.|+.-|+++||+|||.|++|++.-
T Consensus       101 ~A~k~LQ~algv~~DGiiGp~Tl~Al~~~  129 (192)
T d2nr7a1         101 YGIVIPQRILGVQADGIVGNKTLQAVNSA  129 (192)
T ss_dssp             HHHHHHHHHHTSCCCSCCCHHHHHHHHHS
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHC
T ss_conf             89999998748786677289999999954


No 11 
>d2ns0a1 a.4.5.76 (A:1-85) Hypothetical protein RHA1_ro06458 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=29.43  E-value=14  Score=14.25  Aligned_cols=32  Identities=22%  Similarity=0.223  Sum_probs=22.3

Q ss_pred             HHHHHHHHCHHHHHHCCEEEECCCCCEECCCC
Q ss_conf             77777641867787499399938997835020
Q gi|254780350|r  254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE  285 (431)
Q Consensus       254 eilpk~~~dp~yl~~~~~~i~~~~g~~vdp~~  285 (431)
                      ++++..++.-.-|...|..++...|+.|||..
T Consensus        41 ~lM~~vR~aA~~La~~G~i~I~qkG~~VDp~~   72 (85)
T d2ns0a1          41 PLMEPVREAAGRLADAGEVEVTQKGAVVDPRS   72 (85)
T ss_dssp             GGHHHHHHHHHHHHHTTSEEEEETTEECCTTT
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEECCEECCCCC
T ss_conf             87399999999998779689977996468121


No 12 
>d1kapp2 d.92.1.6 (P:1-246) Metalloprotease {Pseudomonas aeruginosa [TaxId: 287]}
Probab=27.75  E-value=2.5  Score=18.86  Aligned_cols=30  Identities=20%  Similarity=0.235  Sum_probs=24.2

Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCCC----CCHHH
Q ss_conf             76457899999999999808887870----29999
Q gi|254780350|r  131 SVAFDAYVESAVKLFQMRHGLDPSGM----VDSST  161 (431)
Q Consensus       131 ~~~yD~~l~~AVk~FQ~rhGL~~DGv----ig~~T  161 (431)
                      +..||+ |++++.+||+-.+|.+||.    ++++|
T Consensus         3 ~~~~~~-~~~~~~~~~r~~~~~v~gkps~~~d~a~   36 (246)
T d1kapp2           3 SDAYTQ-VDNFLHAYARGGDELVNGHPSYTVDQAA   36 (246)
T ss_dssp             CHHHHH-HHHHHTTTCCCSSSEETTEECCCHHHHH
T ss_pred             CCHHHH-HHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf             335999-9999999751699644787245600789


No 13 
>d1b25a1 a.110.1.1 (A:211-619) Formaldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=21.41  E-value=20  Score=13.32  Aligned_cols=11  Identities=18%  Similarity=0.138  Sum_probs=4.7

Q ss_pred             HHHHHHHHHHH
Q ss_conf             45688899999
Q gi|254780350|r    4 YLKINKILYCF   14 (431)
Q Consensus         4 ~~~~~~~~~~~   14 (431)
                      |+|+.|-++-.
T Consensus         5 ~~~~~~~~~~~   15 (409)
T d1b25a1           5 LKKLSQEAYNE   15 (409)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999999


No 14 
>g1apy.1 d.153.1.5 (A:,B:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.18  E-value=20  Score=13.29  Aligned_cols=24  Identities=13%  Similarity=0.181  Sum_probs=14.1

Q ss_pred             HHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf             999999999808887870299999
Q gi|254780350|r  139 ESAVKLFQMRHGLDPSGMVDSSTL  162 (431)
Q Consensus       139 ~~AVk~FQ~rhGL~~DGvig~~Tl  162 (431)
                      -+.-.+|-..||++..-.....+.
T Consensus       105 G~GA~~fA~~~G~~~~~~~t~~s~  128 (302)
T g1apy.1         105 GESATTFAQSMGFINEDLSTSASQ  128 (302)
T ss_dssp             HHHHHHHHHHTTCCCCCCCCHHHH
T ss_pred             CCCCHHHHHHCCCCCCCCCCHHHH
T ss_conf             631013455335655576548899


No 15 
>d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.90  E-value=20  Score=13.26  Aligned_cols=19  Identities=16%  Similarity=0.310  Sum_probs=10.0

Q ss_pred             HHHHHHHHHHHHHCCCCCC
Q ss_conf             8999999999998088878
Q gi|254780350|r  136 AYVESAVKLFQMRHGLDPS  154 (431)
Q Consensus       136 ~~l~~AVk~FQ~rhGL~~D  154 (431)
                      ..+..|++.|-....||..
T Consensus        88 ~~id~ALR~~l~~f~LPgE  106 (211)
T d1ku1a_          88 LRVDEAIRILLTKFRLPGE  106 (211)
T ss_dssp             CCHHHHHHHHTTTCCCCSS
T ss_pred             CCHHHHHHHHHHHCCCCCH
T ss_conf             9789999999984508860


Done!