Query gi|254780350|ref|YP_003064763.1| hypothetical protein CLIBASIA_01175 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 431 No_of_seqs 220 out of 641 Neff 5.9 Searched_HMMs 13730 Date Wed Jun 1 04:37:15 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780350.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1lbua1 a.20.1.1 (A:1-83) Zn2+ 99.5 3.4E-15 2.5E-19 110.6 6.7 68 100-167 8-75 (83) 2 d1zata1 b.160.1.1 (A:339-466) 99.5 3E-14 2.2E-18 104.9 5.3 114 191-358 2-117 (128) 3 d1y7ma1 b.160.1.1 (A:49-164) H 99.3 8.5E-13 6.2E-17 95.9 6.9 101 191-359 5-105 (116) 4 d1l6ja1 a.20.1.2 (A:29-105) Ge 98.1 2.5E-06 1.8E-10 55.9 5.9 59 108-168 11-69 (77) 5 d1su3a1 a.20.1.2 (A:32-98) Fib 97.9 1.1E-05 7.9E-10 52.0 5.8 55 114-168 3-59 (67) 6 d1slma1 a.20.1.2 (A:16-80) Str 97.9 1.5E-05 1.1E-09 51.1 6.4 55 114-168 2-58 (65) 7 d1eaka1 a.20.1.2 (A:32-107) Ge 97.7 5.4E-05 4E-09 47.6 7.2 55 110-168 15-69 (76) 8 d2bgxa1 a.20.1.1 (A:180-260) P 96.2 0.0083 6.1E-07 34.2 6.8 61 102-166 12-73 (81) 9 d2ikba1 d.2.1.9 (A:1-163) Hypo 96.1 0.0033 2.4E-07 36.6 4.3 53 132-185 80-136 (163) 10 d2nr7a1 d.2.1.9 (A:1-192) Puta 95.8 0.0048 3.5E-07 35.6 4.3 29 140-168 101-129 (192) 11 d2ns0a1 a.4.5.76 (A:1-85) Hypo 29.4 14 0.001 14.3 3.4 32 254-285 41-72 (85) 12 d1kapp2 d.92.1.6 (P:1-246) Met 27.8 2.5 0.00018 18.9 -1.9 30 131-161 3-36 (246) 13 d1b25a1 a.110.1.1 (A:211-619) 21.4 20 0.0014 13.3 4.8 11 4-14 5-15 (409) 14 g1apy.1 d.153.1.5 (A:,B:) Glyc 21.2 20 0.0014 13.3 2.1 24 139-162 105-128 (302) 15 d1ku1a_ a.118.3.1 (A:) ARF gua 20.9 20 0.0015 13.3 3.1 19 136-154 88-106 (211) No 1 >d1lbua1 a.20.1.1 (A:1-83) Zn2+ DD-carboxypeptidase, N-terminal domain {Streptomyces albus G [TaxId: 1962]} Probab=99.55 E-value=3.4e-15 Score=110.64 Aligned_cols=68 Identities=22% Similarity=0.288 Sum_probs=63.1 Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC Q ss_conf 74146888824899999999819866567877645789999999999980888787029999988448 Q gi|254780350|r 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167 (431) Q Consensus 100 ~~L~~G~~~~~V~~Lr~RL~~~Gdl~~~~~~~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~ 167 (431) ++|++|+++++|..|+++|...|+.......+++||+.+++||++||++|||++||++|+.||++||. T Consensus 8 ~~L~~G~~g~~V~~lQ~~L~~~g~~~~~~~~dg~fg~~t~~AV~~FQ~~~gL~~dGivg~~T~~~L~~ 75 (83) T d1lbua1 8 GTLSEGSSGEAVRQLQIRVAGYPGTGAQLAIDGQFGPATKAAVQRFQSAYGLAADGIAGPATFNKIYQ 75 (83) T ss_dssp SCBCTTCBSHHHHHHHHHTTTCSCTTCCCCCSSBCCHHHHHHHHHHHHHTTSCCSSCBCHHHHHHHHH T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH T ss_conf 78989997089999999998359987876889832889999999999994999988389999999997 No 2 >d1zata1 b.160.1.1 (A:339-466) L,D-transpeptidase, C-terminal, catalytic domain {Enterococcus faecium [TaxId: 1352]} Probab=99.45 E-value=3e-14 Score=104.86 Aligned_cols=114 Identities=13% Similarity=0.110 Sum_probs=86.4 Q ss_pred CCCHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHCC Q ss_conf 65234542045248999988855554123138877778554210038984487788766777777777641867787499 Q gi|254780350|r 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270 (431) Q Consensus 191 ~~~~~v~VNip~~~l~~~e~g~~~~~~~viVGk~~~~TP~~~~~i~~iv~NP~W~vP~sI~~~eilpk~~~dp~yl~~~~ 270 (431) +++.+|.|++.+++|.++++|+.+..++|.+|++..+||.....|.....+|.|..+. T Consensus 2 ~~~~~I~Vdl~~q~l~l~~~g~~v~~~~vs~G~~~~~Tp~G~~~I~~k~~~~~~~~~~---------------------- 59 (128) T d1zata1 2 IEDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTPAGVFYVWNKEEDATLKGTN---------------------- 59 (128) T ss_dssp SCSCEEEEETTTTEEEEEETTEEEEEEECBCBCTTSCCCCEEEECCCCEEEEECCBCC---------------------- T ss_pred CCCCEEEEECCCCEEEEEECCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCC---------------------- T ss_conf 8871999998679999999999999855679988984777648886412785123455---------------------- Q ss_pred EEEECCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHCCCC--CCCCCCCCEECCC Q ss_conf 39993899783502047010445772247268999863148953158876681388983232865--5554115034479 Q gi|254780350|r 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV--VRFETSGCVRVRN 348 (431) Q Consensus 271 ~~i~~~~g~~vdp~~i~w~~~~~~~~~~rQ~PGp~NaLG~vkf~f~N~~~iyLHdTP~~~lF~~~--~Ra~ShGCVRv~n 348 (431) -.+++.+.-+..+..|.+. .+++|+||.+..+... .+..|||||||.| T Consensus 60 -----------------------------~~~~~~~~~~~~~~~~~~~-~~~~hg~~~~~~~~~~~~g~~~ShGCIRl~~ 109 (128) T d1zata1 60 -----------------------------DDGTPYESPVNYWMPIDWT-GVGIHDSDWQPEYGGDLWKTRGSHGCINTPP 109 (128) T ss_dssp -------------------------------CCCBCCEEEEEEECSSS-SCEEEECTTCSCCSTTHHHHHCBSSSEEECH T ss_pred -----------------------------CCCCCCCCCHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH T ss_conf -----------------------------7788867603456541687-2013578654432355457878876567698 Q ss_pred HHHHHHHHHC Q ss_conf 8999999840 Q gi|254780350|r 349 IIDLDVWLLK 358 (431) Q Consensus 349 p~~La~~ll~ 358 (431) .. |+||.+ T Consensus 110 ~d--a~~ly~ 117 (128) T d1zata1 110 SV--MKELFG 117 (128) T ss_dssp HH--HHHHHH T ss_pred HH--HHHHHH T ss_conf 99--999996 No 3 >d1y7ma1 b.160.1.1 (A:49-164) Hypothetical protein YkuD, C-terminal domain {Bacillus subtilis [TaxId: 1423]} Probab=99.35 E-value=8.5e-13 Score=95.86 Aligned_cols=101 Identities=20% Similarity=0.162 Sum_probs=79.6 Q ss_pred CCCHHHHHHCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHCC Q ss_conf 65234542045248999988855554123138877778554210038984487788766777777777641867787499 Q gi|254780350|r 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270 (431) Q Consensus 191 ~~~~~v~VNip~~~l~~~e~g~~~~~~~viVGk~~~~TP~~~~~i~~iv~NP~W~vP~sI~~~eilpk~~~dp~yl~~~~ 270 (431) ..+..|.|++.+.+|.++++|+.+..++|.+|+.+++||.....+.... T Consensus 5 ~~p~~I~Vd~~~~~l~~~~~g~~v~~~pvs~G~~~~~TP~G~~~i~~k~------------------------------- 53 (116) T d1y7ma1 5 TIPYHIAVSIGAKTLTLSLNNRVMKTYPIAVGKILTQTPTGEFYIINRQ------------------------------- 53 (116) T ss_dssp GCCEEEEEETTTTEEEEEETTEEEEEEECBEEBTTBCCCCEEEEEEEEE------------------------------- T ss_pred CCCEEEEEECCCCEEEEEECCEEEEEEEECCCCCCCCCCCEEEEECCCC------------------------------- T ss_conf 8877999998889999999999999944043789987766666601222------------------------------- Q ss_pred EEEECCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHCCCCCCCCCCCCEECCCHH Q ss_conf 39993899783502047010445772247268999863148953158876681388983232865555411503447989 Q gi|254780350|r 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350 (431) Q Consensus 271 ~~i~~~~g~~vdp~~i~w~~~~~~~~~~rQ~PGp~NaLG~vkf~f~N~~~iyLHdTP~~~lF~~~~Ra~ShGCVRv~np~ 350 (431) +.+.+++|..|+.+... ++++|+|+.+..++. ..|||||||.+ T Consensus 54 -------------------------------~~~~~~~~~~~~~~~~~-~~~~hg~~~~~~~g~---~~ShGCIrl~~-- 96 (116) T d1y7ma1 54 -------------------------------RNPGGPFGAYWLSLSAA-HYGIHGTNNPASIGK---AVSKGCIRMHN-- 96 (116) T ss_dssp -------------------------------ECCCGGGTTEEEEESST-TCEEECCSCGGGTTS---EEESSCEECCH-- T ss_pred -------------------------------CCCCCCCCCEEEEECCC-CCCCCCCCCCCCCCC---CCCCCEECCCH-- T ss_conf -------------------------------11137765278982167-742212214555798---87997005299-- Q ss_pred HHHHHHHCC Q ss_conf 999998404 Q gi|254780350|r 351 DLDVWLLKD 359 (431) Q Consensus 351 ~La~~ll~~ 359 (431) +-|.||.+. T Consensus 97 ~da~~ly~~ 105 (116) T d1y7ma1 97 KDVIELASI 105 (116) T ss_dssp HHHHHHHHH T ss_pred HHHHHHHHC T ss_conf 999999966 No 4 >d1l6ja1 a.20.1.2 (A:29-105) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]} Probab=98.11 E-value=2.5e-06 Score=55.92 Aligned_cols=59 Identities=27% Similarity=0.221 Sum_probs=49.4 Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC Q ss_conf 8248999999998198665678776457899999999999808887870299999884489 Q gi|254780350|r 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168 (431) Q Consensus 108 ~~~V~~Lr~RL~~~Gdl~~~~~~~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~ 168 (431) -.++...+.-|...||++.. .....+..+.+|||.||+-.||++||.+|++|+++|+.| T Consensus 11 ~~d~~~a~~yL~~fGYl~~~--~~~~~~~~~~~AIk~fQ~f~gL~vTG~lD~~T~~~M~~p 69 (77) T d1l6ja1 11 LTDRQLAEEYLYRYGYTRVA--EMRGESKSLGPALLLLQKQLSLPETGELDSATLKAMRTP 69 (77) T ss_dssp CCHHHHHHHHHHHTTCC-------------CHHHHHHHHHHHTCCCCSSCCHHHHHHHTSC T ss_pred CCHHHHHHHHHHHCCCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC T ss_conf 10699999999983899877--766451999999999999839998787699999988447 No 5 >d1su3a1 a.20.1.2 (A:32-98) Fibroblast collagenase (MMP-1) {Human (Homo sapiens) [TaxId: 9606]} Probab=97.88 E-value=1.1e-05 Score=51.99 Aligned_cols=55 Identities=24% Similarity=0.207 Sum_probs=44.8 Q ss_pred HHHHHHHCCCCCCCCCC--CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC Q ss_conf 99999981986656787--76457899999999999808887870299999884489 Q gi|254780350|r 114 LRERLIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168 (431) Q Consensus 114 Lr~RL~~~Gdl~~~~~~--~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~ 168 (431) .++=|..-|||+..... ....+..+.+||+.||+-+||++||.+|++|++.|+.| T Consensus 3 ~~~YL~~fgyl~~~~~~~~~~~~~~~~~~Aik~fQ~f~~L~~TG~lD~~T~~~M~~P 59 (67) T d1su3a1 3 VQKYLEKYYNLKNDGRQVEKRRNSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQP 59 (67) T ss_dssp HHHHHHHHSCCC------------CHHHHHHHHHHHHTTCCCCSSCCHHHHHHHTSC T ss_pred HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC T ss_conf 999999818999886532244565899999999999829985466699999988778 No 6 >d1slma1 a.20.1.2 (A:16-80) Stromelysin-1 (MMP-3) {Human (Homo sapiens), fibroblast [TaxId: 9606]} Probab=97.87 E-value=1.5e-05 Score=51.08 Aligned_cols=55 Identities=27% Similarity=0.234 Sum_probs=44.2 Q ss_pred HHHHHHHCCCCCCCCCCC--CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC Q ss_conf 999999819866567877--6457899999999999808887870299999884489 Q gi|254780350|r 114 LRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168 (431) Q Consensus 114 Lr~RL~~~Gdl~~~~~~~--~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~ 168 (431) .++=|..-|||+...... ..-+..+.+||+.||+-.||++||.+|++|++.|+.| T Consensus 2 ~~~YL~~fgyl~~~~~~~~~~~~~~~l~~Ai~~~Q~f~~L~~TG~lD~~T~~~M~~P 58 (65) T d1slma1 2 VQKYLENYYDLKKDVKQFVRRKDSGPVVKKIREMQKFLGLEVTGKLDSDTLEVMRKP 58 (65) T ss_dssp HHHHHHHHSCCCCC---------CHHHHHHHHHHHHHTTCCCCSSCCHHHHHHTTSC T ss_pred HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC T ss_conf 799999808999874300245667999999999999839974255799999988768 No 7 >d1eaka1 a.20.1.2 (A:32-107) Gelatinase A (MMP-2) {Human (Homo sapiens) [TaxId: 9606]} Probab=97.72 E-value=5.4e-05 Score=47.64 Aligned_cols=55 Identities=20% Similarity=0.146 Sum_probs=45.3 Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC Q ss_conf 48999999998198665678776457899999999999808887870299999884489 Q gi|254780350|r 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168 (431) Q Consensus 110 ~V~~Lr~RL~~~Gdl~~~~~~~~~yD~~l~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~ 168 (431) ++....+-|..-|+++.... + ...+.+||+.||+-.||+++|.+|.+|++.|..| T Consensus 15 d~e~A~~YL~~fgyl~~~~~--~--~~~l~~ai~~~Q~f~~L~~TG~lD~~T~~~m~~p 69 (76) T d1eaka1 15 DKELAVQYLNTFYGCPKESC--N--LFVLKDTLKKMQKFFGLPQTGDLDQNTIETMRKP 69 (76) T ss_dssp HHHHHHHHHHHHTCCCSSCC--C--HHHHHHHHHHHHHHSSCCCCCSCCHHHHHHHTSC T ss_pred CHHHHHHHHHHHCCCCCCCC--C--CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCC T ss_conf 39999999999579986777--5--0799999999999819985355699999988668 No 8 >d2bgxa1 a.20.1.1 (A:180-260) Probable N-acetylmuramoyl-L-alanine amidase YbjR, C-terminal domain {Escherichia coli [TaxId: 562]} Probab=96.18 E-value=0.0083 Score=34.16 Aligned_cols=61 Identities=18% Similarity=0.026 Sum_probs=48.4 Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHHC Q ss_conf 14688882489999999981986656787764578999999999998088-878702999998844 Q gi|254780350|r 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMN 166 (431) Q Consensus 102 L~~G~~~~~V~~Lr~RL~~~Gdl~~~~~~~~~yD~~l~~AVk~FQ~rhGL-~~DGvig~~Tl~aLN 166 (431) .+.+.+-.++..+++.|...||--. .+.+|..+..+|++||.++-= ..||.+|.+|++-|. T Consensus 12 ~~~~~~~~~~~~~~~~L~k~GY~i~----~~~~~~~~k~vi~AFQrhFRp~~i~G~~D~Et~~Il~ 73 (81) T d2bgxa1 12 GRAPHTPVDTASLLELLARYGYDVK----PDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAE 73 (81) T ss_dssp TCCTTCBCCHHHHHHHHHHHTCCCC----TTCCHHHHHHHHHHHHHHHCTTCCSSCCBHHHHHHHH T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCC----CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH T ss_conf 3477893559999999999099888----7877278899999999873611048857899999999 No 9 >d2ikba1 d.2.1.9 (A:1-163) Hypothetical protein NMB1012 {Neisseria meningitidis [TaxId: 487]} Probab=96.06 E-value=0.0033 Score=36.61 Aligned_cols=53 Identities=26% Similarity=0.388 Sum_probs=37.7 Q ss_pred CCCCHHH----HHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCC Q ss_conf 6457899----99999999980888787029999988448988988898640775303 Q gi|254780350|r 132 VAFDAYV----ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185 (431) Q Consensus 132 ~~yD~~l----~~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~~~~r~~qi~~nler~r~ 185 (431) .+||..+ ..|+|-.|+.-|+++||+|||+|+++++.-....+ ...++.+|..+ T Consensus 80 ~~FD~aVN~G~~~A~k~LQ~al~v~vDGiiGp~Tl~Al~~~~~~~l-~~~~~~~R~~~ 136 (163) T d2ikba1 80 QFFDACVNHGYGNAARMLQRAAGVPDDGVIGAVSLKAINSLPENDL-LLRFNAERLVF 136 (163) T ss_dssp HHHHHHHHHCHHHHHHHHHHHTTSCCSSCCCHHHHHHHHHSCHHHH-HHHHHHHHHHH T ss_pred HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHH-HHHHHHHHHHH T ss_conf 9985734288517999999983865235638888999982496999-99999999999 No 10 >d2nr7a1 d.2.1.9 (A:1-192) Putative secretion activator PG0293 {Porphyromonas gingivalis [TaxId: 837]} Probab=95.83 E-value=0.0048 Score=35.61 Aligned_cols=29 Identities=28% Similarity=0.400 Sum_probs=26.6 Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHCCC Q ss_conf 99999999808887870299999884489 Q gi|254780350|r 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168 (431) Q Consensus 140 ~AVk~FQ~rhGL~~DGvig~~Tl~aLN~~ 168 (431) .|+|-.|+.-|+++||+|||.|++|++.- T Consensus 101 ~A~k~LQ~algv~~DGiiGp~Tl~Al~~~ 129 (192) T d2nr7a1 101 YGIVIPQRILGVQADGIVGNKTLQAVNSA 129 (192) T ss_dssp HHHHHHHHHHTSCCCSCCCHHHHHHHHHS T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHC T ss_conf 89999998748786677289999999954 No 11 >d2ns0a1 a.4.5.76 (A:1-85) Hypothetical protein RHA1_ro06458 {Rhodococcus sp. RHA1 [TaxId: 101510]} Probab=29.43 E-value=14 Score=14.25 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=22.3 Q ss_pred HHHHHHHHCHHHHHHCCEEEECCCCCEECCCC Q ss_conf 77777641867787499399938997835020 Q gi|254780350|r 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285 (431) Q Consensus 254 eilpk~~~dp~yl~~~~~~i~~~~g~~vdp~~ 285 (431) ++++..++.-.-|...|..++...|+.|||.. T Consensus 41 ~lM~~vR~aA~~La~~G~i~I~qkG~~VDp~~ 72 (85) T d2ns0a1 41 PLMEPVREAAGRLADAGEVEVTQKGAVVDPRS 72 (85) T ss_dssp GGHHHHHHHHHHHHHTTSEEEEETTEECCTTT T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCEECCCCC T ss_conf 87399999999998779689977996468121 No 12 >d1kapp2 d.92.1.6 (P:1-246) Metalloprotease {Pseudomonas aeruginosa [TaxId: 287]} Probab=27.75 E-value=2.5 Score=18.86 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=24.2 Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCC----CCHHH Q ss_conf 76457899999999999808887870----29999 Q gi|254780350|r 131 SVAFDAYVESAVKLFQMRHGLDPSGM----VDSST 161 (431) Q Consensus 131 ~~~yD~~l~~AVk~FQ~rhGL~~DGv----ig~~T 161 (431) +..||+ |++++.+||+-.+|.+||. ++++| T Consensus 3 ~~~~~~-~~~~~~~~~r~~~~~v~gkps~~~d~a~ 36 (246) T d1kapp2 3 SDAYTQ-VDNFLHAYARGGDELVNGHPSYTVDQAA 36 (246) T ss_dssp CHHHHH-HHHHHTTTCCCSSSEETTEECCCHHHHH T ss_pred CCHHHH-HHHHHHHHHCCCCCCCCCCCCCCHHHHH T ss_conf 335999-9999999751699644787245600789 No 13 >d1b25a1 a.110.1.1 (A:211-619) Formaldehyde ferredoxin oxidoreductase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Probab=21.41 E-value=20 Score=13.32 Aligned_cols=11 Identities=18% Similarity=0.138 Sum_probs=4.7 Q ss_pred HHHHHHHHHHH Q ss_conf 45688899999 Q gi|254780350|r 4 YLKINKILYCF 14 (431) Q Consensus 4 ~~~~~~~~~~~ 14 (431) |+|+.|-++-. T Consensus 5 ~~~~~~~~~~~ 15 (409) T d1b25a1 5 LKKLSQEAYNE 15 (409) T ss_dssp HHHHHHHHHHH T ss_pred HHHHHHHHHHH T ss_conf 99999999999 No 14 >g1apy.1 d.153.1.5 (A:,B:) Glycosylasparaginase (aspartylglucosaminidase, AGA) {Human (Homo sapiens) [TaxId: 9606]} Probab=21.18 E-value=20 Score=13.29 Aligned_cols=24 Identities=13% Similarity=0.181 Sum_probs=14.1 Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHH Q ss_conf 999999999808887870299999 Q gi|254780350|r 139 ESAVKLFQMRHGLDPSGMVDSSTL 162 (431) Q Consensus 139 ~~AVk~FQ~rhGL~~DGvig~~Tl 162 (431) -+.-.+|-..||++..-.....+. T Consensus 105 G~GA~~fA~~~G~~~~~~~t~~s~ 128 (302) T g1apy.1 105 GESATTFAQSMGFINEDLSTSASQ 128 (302) T ss_dssp HHHHHHHHHHTTCCCCCCCCHHHH T ss_pred CCCCHHHHHHCCCCCCCCCCHHHH T ss_conf 631013455335655576548899 No 15 >d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=20.90 E-value=20 Score=13.26 Aligned_cols=19 Identities=16% Similarity=0.310 Sum_probs=10.0 Q ss_pred HHHHHHHHHHHHHCCCCCC Q ss_conf 8999999999998088878 Q gi|254780350|r 136 AYVESAVKLFQMRHGLDPS 154 (431) Q Consensus 136 ~~l~~AVk~FQ~rhGL~~D 154 (431) ..+..|++.|-....||.. T Consensus 88 ~~id~ALR~~l~~f~LPgE 106 (211) T d1ku1a_ 88 LRVDEAIRILLTKFRLPGE 106 (211) T ss_dssp CCHHHHHHHHTTTCCCCSS T ss_pred CCHHHHHHHHHHHCCCCCH T ss_conf 9789999999984508860 Done!