BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780350|ref|YP_003064763.1| hypothetical protein
CLIBASIA_01175 [Candidatus Liberibacter asiaticus str. psy62]
         (431 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780350|ref|YP_003064763.1| hypothetical protein CLIBASIA_01175 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040027|gb|ACT56823.1| hypothetical protein CLIBASIA_01175 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 431

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/431 (100%), Positives = 431/431 (100%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60
           MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD
Sbjct: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII
Sbjct: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL
Sbjct: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF
Sbjct: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ
Sbjct: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT
Sbjct: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII
Sbjct: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420

Query: 421 PLPEDHPIDSD 431
           PLPEDHPIDSD
Sbjct: 421 PLPEDHPIDSD 431


>gi|315122226|ref|YP_004062715.1| hypothetical protein CKC_02390 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495628|gb|ADR52227.1| hypothetical protein CKC_02390 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 431

 Score =  624 bits (1610), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 296/430 (68%), Positives = 360/430 (83%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60
           M+ YLKI  +++ FF YLIL MGL LV+ P+ A +LDEI  ESYH+ V++RFD  L+R D
Sbjct: 1   MISYLKIINVVHRFFTYLILLMGLFLVKYPVRADILDEITKESYHANVDNRFDTLLSRPD 60

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           +GIDS   I+S ETI  TEKAI FYQDI+SRGGW +L  RPL LG+SSV VQ+LRERLII
Sbjct: 61  IGIDSYAAIVSNETITNTEKAIVFYQDIVSRGGWQQLANRPLRLGDSSVLVQKLRERLII 120

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           SGDLD SKG S  FD+YVESAVK FQ RHGL P G+VD +TL+A+NVP DLR+RQL+VNL
Sbjct: 121 SGDLDSSKGFSSVFDSYVESAVKFFQARHGLFPDGVVDIATLKAINVPADLRLRQLRVNL 180

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +RI  LL++KMG RYVL+NIP+AS+EAVEN KV LRS  IVGR+DRQTPILHS+I+RIM 
Sbjct: 181 LRISNLLKRKMGSRYVLINIPSASMEAVENDKVALRSVAIVGRIDRQTPILHSKIDRIML 240

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NPYWVIPRSII+KD++ L+R+ P+YLK++NIH+I++KGKEV  E+VDWNS + P+FIFRQ
Sbjct: 241 NPYWVIPRSIIKKDLVELVRESPEYLKESNIHIINDKGKEVLPEDVDWNSADLPHFIFRQ 300

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           D GK NAMASTKIEFYS+NN+YMHDTPEP LF+   RFETSGCVRV+NIIDL+VWLLK+ 
Sbjct: 301 DSGKNNAMASTKIEFYSQNNSYMHDTPEPFLFSQTARFETSGCVRVKNIIDLNVWLLKNM 360

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           P WSR+ IEEV+KTRKTTPVKL  EV +HFVYISAWS KD ++QFRDD+YGLDNV++  I
Sbjct: 361 PGWSRHDIEEVIKTRKTTPVKLDKEVLIHFVYISAWSTKDLVVQFRDDVYGLDNVYIDSI 420

Query: 421 PLPEDHPIDS 430
           PLP  +P++S
Sbjct: 421 PLPGKYPVNS 430


>gi|227821529|ref|YP_002825499.1| putative amidase [Sinorhizobium fredii NGR234]
 gi|227340528|gb|ACP24746.1| putative amidase [Sinorhizobium fredii NGR234]
          Length = 442

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/383 (51%), Positives = 272/383 (71%), Gaps = 3/383 (0%)

Query: 35  VLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW 94
            L E+IN       +D+FD   +R    + S+ P+   +TI   ++AI  YQ I++ GGW
Sbjct: 36  ALGELINSPRRGSWDDQFDAKASRTATAVLSNTPVFGPQTIGHVQQAIFDYQQIVAAGGW 95

Query: 95  PELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P++P     L LG +  SVQ+LR+RL++SGDL  S G+S +FD+YV+ AVK FQ RHGL 
Sbjct: 96  PQVPQTGARLELGVTDPSVQQLRQRLMVSGDLPRSAGISSSFDSYVDGAVKRFQARHGLP 155

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++   + +A+NV    R+ QL+ NL+R++ +    +G RYV+VNIPAA +EAVENG+
Sbjct: 156 ADGVIGEYSFKALNVDAATRLAQLETNLVRLQSM-SGDLGRRYVMVNIPAAYIEAVENGR 214

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V LR T IVG++DRQ+PIL+S+I  ++ NPYW  PRSI+QKD+M L+R+DP YL+ N I 
Sbjct: 215 VVLRHTAIVGKIDRQSPILNSKIYEVILNPYWTAPRSIVQKDIMPLMRKDPTYLERNAIR 274

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           ++D  G EV  E VDWN+ + PN +FRQDPGKINAM+STKI F++ ++ YMHDTP+  LF
Sbjct: 275 LLDGSGNEVSPETVDWNAEKAPNLMFRQDPGKINAMSSTKINFHNEHSVYMHDTPQQGLF 334

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           N ++RFE+SGCVRV+N+ DL  WLLK+TP WSR  IE  +KT   TP+KLA EVPV+F Y
Sbjct: 335 NKLMRFESSGCVRVQNVRDLSTWLLKETPGWSRQQIEATIKTGVNTPIKLAEEVPVYFTY 394

Query: 393 ISAWSPKDSIIQFRDDIYGLDNV 415
           I+AWS KD ++QFRDDIY  D  
Sbjct: 395 ITAWSAKDRVVQFRDDIYQRDGA 417


>gi|15964960|ref|NP_385313.1| hypothetical protein SMc01769 [Sinorhizobium meliloti 1021]
 gi|307301031|ref|ZP_07580800.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|307317765|ref|ZP_07597203.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|15074139|emb|CAC45786.1| Hypothetical protein SMc01769 [Sinorhizobium meliloti 1021]
 gi|306896527|gb|EFN27275.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306903986|gb|EFN34572.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 443

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 201/383 (52%), Positives = 270/383 (70%), Gaps = 4/383 (1%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP 95
           L+EIIN       +D+FD   +R    + S+ P+   ETIA  ++AI  YQ I S GGWP
Sbjct: 37  LNEIINSPRRGSWDDQFDAKASRTATAVLSNTPVFGPETIAHLQQAIFDYQQIASAGGWP 96

Query: 96  EL---PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +     + L +G +  SVQ+LR+RL+ISGDL  S G+S +FD+YV+ AVK FQ RHGL 
Sbjct: 97  MVTPASTQRLEIGVTDPSVQQLRQRLMISGDLPQSAGISSSFDSYVDGAVKRFQARHGLP 156

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++   +L+AMNV    R+ QL+ NL+R++ +    +G RYV+VNIPAA +EAVENG+
Sbjct: 157 ADGVIGEYSLKAMNVDASTRLAQLETNLVRLQSM-SGDLGRRYVMVNIPAAYIEAVENGR 215

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V LR T IVG++DRQ+PIL+S+I  ++ NPYW  PRSIIQKD+M L+R+DP YL  N I 
Sbjct: 216 VALRHTAIVGKIDRQSPILNSKIYEVILNPYWTAPRSIIQKDIMPLMRKDPTYLARNAIR 275

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           ++D  G EV  E +DW + + PN +FRQDPGKINAM+STKI F++ +  YMHDTP+  LF
Sbjct: 276 LLDGNGNEVSPETIDWQAEKAPNLMFRQDPGKINAMSSTKINFHNEHAVYMHDTPQQGLF 335

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           N ++RFE+SGCVRV+N+ DL  WLLK+TP W+R  IE  +K+   TP+KLA EVPV+F Y
Sbjct: 336 NKLMRFESSGCVRVQNVRDLSTWLLKETPGWARQQIEATIKSGVNTPIKLAEEVPVYFTY 395

Query: 393 ISAWSPKDSIIQFRDDIYGLDNV 415
           I+AWS KD ++QFRDDIY  D  
Sbjct: 396 ITAWSAKDRVVQFRDDIYQRDGA 418


>gi|150396039|ref|YP_001326506.1| peptidoglycan binding domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150027554|gb|ABR59671.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium medicae
           WSM419]
          Length = 443

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/384 (52%), Positives = 271/384 (70%), Gaps = 4/384 (1%)

Query: 35  VLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW 94
            L+EIIN       +D+FD   +R    + S+ P+   ETIA  ++AI  YQ I + GGW
Sbjct: 36  ALNEIINSPRRGSWDDQFDAKASRTATAVLSNTPVFGPETIALLQQAILDYQQIAAAGGW 95

Query: 95  PEL---PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P +     + L LG +  +VQ+LR+RL+ISGDL  S G+S +FD+YV+ AVK FQ RHGL
Sbjct: 96  PMVNPASTQRLELGVNDPAVQQLRQRLMISGDLPQSAGISPSFDSYVDGAVKRFQARHGL 155

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
              G++   +L+A+NV    R+ QL+ NL+R++ +    +G RYV+VNIPAA +EAVENG
Sbjct: 156 PADGVIGEYSLKALNVDASTRLAQLETNLVRLQSM-SGDLGRRYVMVNIPAAYIEAVENG 214

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +V LR T IVG++DRQ+PIL+S+I  ++ NPYW  PRSIIQKD+M L+R+DP YL+ N I
Sbjct: 215 RVALRHTAIVGKIDRQSPILNSKIYEVILNPYWTAPRSIIQKDIMPLMRKDPTYLERNAI 274

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            ++D  G EV  E +DW + + PN +FRQDPGKINAM+STKI F++ +  YMHDTP+  L
Sbjct: 275 RLLDGNGNEVSPETIDWQAEKAPNLMFRQDPGKINAMSSTKINFHNEHAVYMHDTPQQGL 334

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           FN ++RFE+SGCVRV+N+ DL  WLLK+TP WSR  IE  +K+   TP+KLA EVPV+F 
Sbjct: 335 FNKLMRFESSGCVRVQNVRDLSTWLLKETPGWSRQQIEGTIKSGVNTPIKLAEEVPVYFT 394

Query: 392 YISAWSPKDSIIQFRDDIYGLDNV 415
           YI+AWS KD ++QFRDDIY  D  
Sbjct: 395 YITAWSAKDRVVQFRDDIYQRDGA 418


>gi|222085506|ref|YP_002544036.1| peptidoglycan binding protein [Agrobacterium radiobacter K84]
 gi|221722954|gb|ACM26110.1| peptidoglycan binding protein [Agrobacterium radiobacter K84]
          Length = 437

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/381 (53%), Positives = 271/381 (71%), Gaps = 4/381 (1%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMG-IDSDIPIISKETIAQTEKAIAFYQDILSRGGW 94
           LD +IN       +D+FD   A      + S+ PI+  +++   ++AIA YQ+I + GGW
Sbjct: 40  LDALINNRARGNWDDQFDAKAAARTAAAVQSNTPILGPDSVPNIQQAIAQYQNIAANGGW 99

Query: 95  PELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P++    + L LG +  +VQ LR+ L+++GDL    G+S AFD+YV+ AVK FQ RHGL 
Sbjct: 100 PQITPGDQKLQLGVTDGAVQALRQHLMVTGDLPREAGISSAFDSYVDGAVKRFQARHGLP 159

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           P G++   TL+AMN+P ++R++QL  NL+R++      +G R+V+VNIPA  +EAVE+G+
Sbjct: 160 PDGVLGDFTLKAMNIPANVRLQQLNTNLVRLQTF-PADLGRRHVMVNIPATRVEAVEDGQ 218

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V LR   IVGR  R T +++S+I  ++ NPYW  PRSII KD+M L+R+DP YL  NNI 
Sbjct: 219 VALRHEAIVGRESRPTHLINSKIYEVILNPYWTAPRSIIIKDIMPLMRKDPTYLSKNNIR 278

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           ++D KG+EV  E +DWNS + PN +FRQDPGK NAMASTKI FY+ NN YMHDTPE  LF
Sbjct: 279 LLDGKGQEVAPETIDWNSDKAPNLMFRQDPGKTNAMASTKINFYNPNNEYMHDTPEQGLF 338

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           N ++RF++SGCVRV+N+ DL  WLL DTP W R HIE+V+ TR  TP+KLATEVPV+FVY
Sbjct: 339 NKLMRFDSSGCVRVQNVRDLATWLLTDTPGWPRQHIEQVISTRVNTPIKLATEVPVYFVY 398

Query: 393 ISAWSPKDSIIQFRDDIYGLD 413
           ISAWS  D I+QFRDDIY LD
Sbjct: 399 ISAWSAADGIVQFRDDIYNLD 419


>gi|116251385|ref|YP_767223.1| hypothetical protein RL1618A [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256033|emb|CAK07114.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 433

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/386 (52%), Positives = 272/386 (70%), Gaps = 9/386 (2%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
           S LD +IN       +D+FD   A R    + S+ PI+  +++A  ++AI  YQ I + G
Sbjct: 35  SALDTLINAPRRGNWDDQFDAKAASRTATAMVSNTPILGPQSVASAQQAIMQYQQIAAAG 94

Query: 93  GWPELPIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           GWPE  + P    L LG SS SVQ LR+RL I+GDL    GLS AFD+YV+ AVK FQ R
Sbjct: 95  GWPE--VNPGDQRLQLGVSSPSVQALRQRLAITGDLPREAGLSNAFDSYVDGAVKRFQAR 152

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   TL+AMN+P D+R++QL  N++R++   E  +G R+++VNIPAA +EAV
Sbjct: 153 HGLPADGVLGEFTLKAMNIPADVRLQQLNTNVVRLQTFPE-DLGRRHLMVNIPAAYVEAV 211

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E+G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ 
Sbjct: 212 EDGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEK 271

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           N I ++D KG EV  E VDWN  E PN +FRQDPGKINAMASTKI FY++N  YMHDTP+
Sbjct: 272 NAIRLLDGKGNEVAPETVDWNG-EAPNLMFRQDPGKINAMASTKINFYNKNGEYMHDTPQ 330

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  +E+V+ T   TP+KLA EVPV
Sbjct: 331 QGLFNKLMRFESSGCVRVQNVRDLTNWLLRETPGWSRQQMEQVIATGVNTPIKLAAEVPV 390

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDN 414
           +FVYISAW   D I+QFRDDIY +D 
Sbjct: 391 YFVYISAWGMPDGIVQFRDDIYQMDG 416


>gi|209548779|ref|YP_002280696.1| peptidoglycan-binding protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534535|gb|ACI54470.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 433

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/404 (50%), Positives = 280/404 (69%), Gaps = 6/404 (1%)

Query: 15  FVYLILPMGLSLVEKPIHA-SVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISK 72
           F+     +G+S +  P  A S +D +IN       +D+FD   A R    + S+ PI+  
Sbjct: 15  FLASAATVGVSAIAAPAFAQSAIDTLINAPRRGNWDDQFDAKAASRTASAVVSNTPILGP 74

Query: 73  ETIAQTEKAIAFYQDILSRGGWPEL--PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           +++A  ++A+  YQ I + GGWPE+    + L LG S  +VQ LR+RL I+GDL    G+
Sbjct: 75  QSLASAQQAVMQYQQIAAAGGWPEVNPGDQKLQLGVSHPAVQALRQRLAITGDLPREAGM 134

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           S AFD+YV+ AVK FQ RHGL   G++   TL+AMN+P D+R++QL  N++R++   E  
Sbjct: 135 SSAFDSYVDGAVKRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQLNTNIIRLQTFPE-D 193

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +G R+V+VNIPAA +EAVE+G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI
Sbjct: 194 LGRRHVMVNIPAAYVEAVEDGTVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTSPRSI 253

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
           ++KD+M L+R+DP YL+ N I +ID KG EV  E +DWN  E PN +FRQDPGK NAMAS
Sbjct: 254 VEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVAPETIDWNG-EAPNLMFRQDPGKTNAMAS 312

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
           TKI FY++N  YMHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLL++TP W+R  +E+
Sbjct: 313 TKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSNWLLRETPGWNRQQMEQ 372

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           V+ +   TPVKLATEVPV+FVYISAW   D I+QFRDDIY +D 
Sbjct: 373 VIASGVNTPVKLATEVPVYFVYISAWGMPDGIVQFRDDIYQMDG 416


>gi|86357145|ref|YP_469037.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CFN 42]
 gi|86281247|gb|ABC90310.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CFN 42]
          Length = 433

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/384 (52%), Positives = 272/384 (70%), Gaps = 5/384 (1%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
           S LD +IN       +D+FD   A R    + S+ PI+  +++A  ++AI  YQ I + G
Sbjct: 35  SALDTLINAPRRGNWDDQFDAKAASRTATAVVSNTPILGPQSVASAQQAIMQYQQIAAAG 94

Query: 93  GWPEL--PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GWPE+    + L LG SS +VQ LR+RL I+GDL    G+S AFD+YV+ AVK FQ RHG
Sbjct: 95  GWPEVNPGDQRLQLGVSSPAVQVLRQRLAITGDLPREAGMSNAFDSYVDGAVKRFQARHG 154

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G++   TL+AMN+P D+R++QL  NL+R++   E  +G R+++VNIPAA +EAVE+
Sbjct: 155 LPSDGVLGEFTLKAMNIPADVRLQQLNTNLVRLQTFPE-DLGRRHLMVNIPAAYVEAVED 213

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ N 
Sbjct: 214 GSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKNA 273

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
           I +ID KG EV  E +DWN  E PN  FRQDPGKINAMASTKI FY++N  YMHDTP+  
Sbjct: 274 IRLIDGKGNEVSPETIDWNG-EAPNLQFRQDPGKINAMASTKINFYNKNGEYMHDTPQQG 332

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  +E+V+ +   TP+KLATEVPV+F
Sbjct: 333 LFNKLMRFESSGCVRVQNVRDLSTWLLRETPGWSRQQMEQVIASGVNTPIKLATEVPVYF 392

Query: 391 VYISAWSPKDSIIQFRDDIYGLDN 414
           VYISAW   D I+QFRDDIY +D 
Sbjct: 393 VYISAWGMPDGIVQFRDDIYQMDG 416


>gi|190891191|ref|YP_001977733.1| peptidoglycan binding protein (involved in cell wall degradation)
           [Rhizobium etli CIAT 652]
 gi|190696470|gb|ACE90555.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CIAT 652]
 gi|327192107|gb|EGE59084.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CNPAF512]
          Length = 434

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/384 (52%), Positives = 271/384 (70%), Gaps = 5/384 (1%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
           S LD ++N       +D+FD   A R    + S+ PI+  +++A  ++AI  YQ I + G
Sbjct: 36  SALDGLLNAPRRGNWDDQFDAKAASRTASAVVSNTPILGPQSVASAQQAIMQYQQIAAAG 95

Query: 93  GWPEL--PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GWPE+    + L LG S  +VQ LR+RL I+GDL    G+S AFD+YV+ AVK FQ RHG
Sbjct: 96  GWPEVNPGDQRLQLGVSHPAVQALRQRLAITGDLPREAGMSSAFDSYVDGAVKRFQARHG 155

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G++   TL+AMN+P D+R++QL  NL+R++   E  +G R+V+VNIPAA +EAVE+
Sbjct: 156 LPSDGVLGEFTLKAMNIPADVRLQQLNTNLVRLQTFPE-DLGRRHVMVNIPAAYVEAVED 214

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ N 
Sbjct: 215 GSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKNA 274

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
           I +ID KG EV  E VDWN  E PN  FRQDPGKINAMASTKI FY++N  YMHDTP+  
Sbjct: 275 IRLIDGKGNEVAPETVDWNG-EAPNLQFRQDPGKINAMASTKINFYNKNGEYMHDTPQQG 333

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  +E+V+ T   TP+KLATEVPV+F
Sbjct: 334 LFNKLMRFESSGCVRVQNVRDLTNWLLRETPGWSRQQMEQVIATGVNTPIKLATEVPVYF 393

Query: 391 VYISAWSPKDSIIQFRDDIYGLDN 414
           VYISAW   D I+QFRDDIY +D 
Sbjct: 394 VYISAWGMPDGIVQFRDDIYQMDG 417


>gi|241204000|ref|YP_002975096.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857890|gb|ACS55557.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 433

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/386 (52%), Positives = 272/386 (70%), Gaps = 9/386 (2%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
           S LD +IN       +D+FD   A R    + S+ PI+  +++A  ++AI  YQ I + G
Sbjct: 35  SALDTLINAPRRGNWDDQFDAKAASRTATAMVSNTPILGPQSVASAQQAIMQYQQIAAAG 94

Query: 93  GWPELPIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           GWPE  + P    L LG SS +VQ LR+RL I+GDL    GLS AFD+YV+ AVK FQ R
Sbjct: 95  GWPE--VNPGDQRLQLGVSSPAVQALRQRLAITGDLPREAGLSNAFDSYVDGAVKRFQAR 152

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   TL+AMN+P D+R++QL  N++R++   E  +G R+++VNIPAA +EAV
Sbjct: 153 HGLPADGVLGEFTLKAMNIPADVRLQQLNTNVVRLQTFPE-DLGRRHLMVNIPAAYVEAV 211

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E+G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ 
Sbjct: 212 EDGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEK 271

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           N I ++D KG EV  E +DWN  E PN +FRQDPGK NAMASTKI FY++N  YMHDTP+
Sbjct: 272 NAIRLLDGKGNEVAPETIDWNG-EAPNLMFRQDPGKTNAMASTKINFYNKNGEYMHDTPQ 330

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LFN ++RFE+SGCVRV+N+ DL  WLL++TP W+R  +E+V+ T   TPVKLATEVPV
Sbjct: 331 QGLFNKLMRFESSGCVRVQNVRDLSNWLLRETPGWNRQQMEQVIATGVNTPVKLATEVPV 390

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDN 414
           +FVYISAW   D I+QFRDDIY +D 
Sbjct: 391 YFVYISAWGMPDGIVQFRDDIYQMDG 416


>gi|222148202|ref|YP_002549159.1| hypothetical protein Avi_1609 [Agrobacterium vitis S4]
 gi|221735190|gb|ACM36153.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 410

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/381 (50%), Positives = 272/381 (71%), Gaps = 2/381 (0%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG 93
           S +DE+IN       +D+FD   +R    + S+ P++S   +   + AI+ YQ I+++GG
Sbjct: 4   SAVDELINARSRGNWDDQFDAQTSRAVASVTSNSPMLSATNLPNLQLAISAYQQIVAQGG 63

Query: 94  WPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP++ P   L LG+    VQ+LR+RL+ISGDL    G+S +FD YV+ AVK FQ RHGL 
Sbjct: 64  WPQVNPSVKLKLGSIDPVVQQLRQRLMISGDLGQEAGMSNSFDTYVDGAVKRFQARHGLP 123

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +   TL+AMN+  D+R+ QL  NL+R++ +    +G RYV+VNIP+ S+EAVEN +
Sbjct: 124 TDGALGEYTLKAMNISADVRLNQLNTNLVRLQAM-SGDLGNRYVMVNIPSMSIEAVENDR 182

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V LR+  +VGR+DR T  ++S+I  ++ NPYW  PRSI++KD++ L+R+DP YL  NNI 
Sbjct: 183 VALRTNAVVGRIDRPTHSINSKIYEVILNPYWTAPRSIVEKDIVPLMRKDPTYLTRNNIR 242

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           + D KG+EV  E VDWN+P+ PN +FRQDPGKINAMASTKI F++ NN Y+HDTP+  LF
Sbjct: 243 LFDGKGQEVAPETVDWNAPKAPNLMFRQDPGKINAMASTKINFHNPNNEYLHDTPQQGLF 302

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           N ++RFE+SGC+RV+N+ DL  WLL+DTP W+R  IE V+ TR+   +KL+ EVPV+ VY
Sbjct: 303 NKLMRFESSGCMRVQNVRDLITWLLRDTPGWNRQEIERVISTRQNNVIKLSQEVPVYIVY 362

Query: 393 ISAWSPKDSIIQFRDDIYGLD 413
           I+AWS KD+++QFRDDIY  D
Sbjct: 363 ITAWSAKDNVVQFRDDIYKRD 383


>gi|15888502|ref|NP_354183.1| hypothetical protein Atu1164 [Agrobacterium tumefaciens str. C58]
 gi|15156204|gb|AAK86968.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 443

 Score =  412 bits (1058), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/379 (50%), Positives = 274/379 (72%), Gaps = 3/379 (0%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
           ++++  S     +D+FD   +R  +G+ S+ P++ +E     ++AI  YQ I+  GGWP+
Sbjct: 38  NDLMGSSRRGNWDDQFDANTSRSAVGVVSNNPVLGREAPVYMQQAIMQYQQIVQNGGWPD 97

Query: 97  LPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +P   + L +G S  SVQ LR+RL++SGDL    G+S AFD+YV+ A+K FQ RHGL   
Sbjct: 98  VPTSQQRLQIGVSDPSVQALRQRLMVSGDLPREAGISSAFDSYVDGALKRFQARHGLPAD 157

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+    T +A+NV   +R+ QLQ NL+RI+ +    +G R+++VNIPAA++EAVEN +V 
Sbjct: 158 GVSGEYTTKALNVSAQIRLAQLQTNLVRIQSM-SGDLGQRHMMVNIPAAAIEAVENERVV 216

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           LR+T +VGR  R T +++S++  ++ NPYW  PRSI++KD++ L+++DP YL+ NNI +I
Sbjct: 217 LRNTAVVGRASRPTHVINSKVYEVILNPYWTAPRSIVEKDIVPLMQKDPTYLERNNIRLI 276

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           D KG+EV    VDW +P+ PN +FRQDPGKINAM+STKI F++ NN YMHDTP+  LFN 
Sbjct: 277 DGKGQEVSPTTVDWFAPKAPNLMFRQDPGKINAMSSTKINFHNPNNEYMHDTPQQGLFNK 336

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
           ++RFE+SGCVRV+N+ DL  WLL+DTP WSR  +E V+ +R  TP+KLA EVPV+FVYI+
Sbjct: 337 LMRFESSGCVRVQNVRDLTSWLLRDTPGWSRQEMERVIASRVNTPIKLAQEVPVYFVYIT 396

Query: 395 AWSPKDSIIQFRDDIYGLD 413
           AWS KD ++QFRDDIYG D
Sbjct: 397 AWSAKDGVVQFRDDIYGKD 415


>gi|325292539|ref|YP_004278403.1| hypothetical protein AGROH133_05364 [Agrobacterium sp. H13-3]
 gi|325060392|gb|ADY64083.1| hypothetical protein AGROH133_05364 [Agrobacterium sp. H13-3]
          Length = 443

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/379 (50%), Positives = 274/379 (72%), Gaps = 3/379 (0%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
           ++++  S     +D+FD   +R  +G+ S+ P++ +E     ++AI  YQ I+  GGWP+
Sbjct: 38  NDLMGSSRRGNWDDQFDANSSRSAVGVVSNNPVLGREAPVYMQQAIMQYQQIVQNGGWPD 97

Query: 97  LPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +P+  + L +G S  SVQ LR+RL++SGDL    G+S AFD+YV+ A+K FQ RHGL   
Sbjct: 98  VPVTQQRLQIGVSDPSVQALRQRLMVSGDLPREAGISSAFDSYVDGALKRFQARHGLPAD 157

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+    T +A+NV   +R+ QLQ NL+RI+ +    +G R+++VNIPAA++EAVEN +V 
Sbjct: 158 GVSGEYTTKALNVSAQIRLAQLQTNLVRIQSM-SGDLGQRHLMVNIPAAAIEAVENERVV 216

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           LR+T +VGR  R T +++S+I  ++ NPYW  PRSI++KD++ L+++DP YL+ NNI +I
Sbjct: 217 LRNTAVVGRASRPTHVINSKIYEVILNPYWTAPRSIVEKDIVPLMQKDPTYLERNNIRLI 276

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           D KG+EV    VDW +P+ PN +FRQDPGKINAM+STKI F++ NN YMHDTP+  LFN 
Sbjct: 277 DGKGQEVSPTAVDWFAPKAPNLMFRQDPGKINAMSSTKINFHNPNNEYMHDTPQQGLFNK 336

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
           ++RFE+SGCVRV+N+ DL  WLL+DTP WSR  +E V+ TR  TP+KLA EVPV+FVYI+
Sbjct: 337 LMRFESSGCVRVQNVRDLTSWLLRDTPGWSRQEMERVIATRVNTPIKLAQEVPVYFVYIT 396

Query: 395 AWSPKDSIIQFRDDIYGLD 413
           AWS KD ++QFRDDIY  D
Sbjct: 397 AWSAKDGVVQFRDDIYEKD 415


>gi|218515859|ref|ZP_03512699.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli 8C-3]
          Length = 372

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/354 (55%), Positives = 257/354 (72%), Gaps = 8/354 (2%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP----LHLGNSSVSVQRLRERLII 120
           S+ PI+  +++A  ++AI  YQ I + GGWPE  + P    L LG S  +VQ LR+RL I
Sbjct: 6   SNTPILGPQSVASAQQAIMQYQQIAAAGGWPE--VNPGDQRLQLGVSHPAVQALRQRLAI 63

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           +GDL    G+S AFD+YV+ AVK FQ RHGL   G++   TL+AMN+P D+R++QL  NL
Sbjct: 64  TGDLPREAGMSSAFDSYVDGAVKRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQLNTNL 123

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +R++   E  +G R+V+VNIPAA +EAVE+G V  R T +VGR+ R T +++S+I  ++ 
Sbjct: 124 VRLQTFPE-DLGRRHVMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIYEVIL 182

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NPYW  PRSI++KD+M L+R+DP YL+ N I +ID KG EV  E VDWN  E PN  FRQ
Sbjct: 183 NPYWTAPRSIVEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVAPETVDWNG-EAPNLQFRQ 241

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           DPGKINAMASTKI FY++N  YMHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLL++T
Sbjct: 242 DPGKINAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLTNWLLRET 301

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           P WSR  +E+V+ T   TP+KLATEVPV+FVYISAW   D I+QFRDDIY +D 
Sbjct: 302 PGWSRQQMEQVIATGVNTPIKLATEVPVYFVYISAWGMPDGIVQFRDDIYQMDG 355


>gi|239831589|ref|ZP_04679918.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239823856|gb|EEQ95424.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 438

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/395 (49%), Positives = 269/395 (68%), Gaps = 7/395 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I        +D+FD   AR   G  + ++ P++S +T+   + AI
Sbjct: 38  AMVSSAYAQQVLTDVIAAPRRGNWDDQFD---ARATGGQRVATNQPVLSPQTVGNLQTAI 94

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           A Y DI  RGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS +FD YV++A
Sbjct: 95  AQYTDIAGRGGWPSVPGNAKLQIGVTDPAVQALRKRLMISGDLPQEAGLSSSFDTYVDAA 154

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           VK FQ RHGL   G++   T  AMNV  + R+ QLQ NL R+  L +Q M   R+V+VNI
Sbjct: 155 VKRFQSRHGLPADGVMGQFTYAAMNVDANTRLGQLQTNLQRLSPLADQGMQEQRFVMVNI 214

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTPIL+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 215 PAARIEAVEGGSVVQRHTAVVGKIDRQTPILNSKIHEVILNPYWTAPKSIIQKDIIPLMR 274

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++++ 
Sbjct: 275 KDPQYLAKNKIRLYDQSGQEVAPETVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNQHQ 334

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R  IE  +K+   TP+
Sbjct: 335 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTAGWDRQTIENTIKSGTNTPI 394

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           ++A  VP+HFVYISAWS  D ++QFRDDIY +D  
Sbjct: 395 QVADPVPLHFVYISAWSTGDGVVQFRDDIYKMDGA 429


>gi|153009858|ref|YP_001371073.1| peptidoglycan-binding domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561746|gb|ABS15244.1| Peptidoglycan-binding domain 1 protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 433

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 195/395 (49%), Positives = 268/395 (67%), Gaps = 7/395 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V        L ++I+ S      D+FD   AR   G  + ++ P++S +T+   + AI
Sbjct: 33  AMVSSAYAQQALTDVISSSRRGNWADQFD---ARATGGQRVATNQPVLSPQTVGNLQTAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           A Y DI  RGGWP +P    L +G +  SVQ LR+RL+ISGDL    GLS +FD YV++A
Sbjct: 90  AQYTDIAGRGGWPSVPGNTKLQIGVTDPSVQALRKRLMISGDLPQEAGLSSSFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           VK FQ RHGL   G++   T  AMNV  + R+ QLQ NL R+  L  Q +   R+V+VNI
Sbjct: 150 VKRFQSRHGLPADGVMGQFTYAAMNVDANTRLGQLQTNLQRLSPLANQGLQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTPIL+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVMQRHTAVVGKIDRQTPILNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DPQYL  N I + D+ G+EV  E +DWN+ +    +FRQDPGKINAM+STKI F+++  
Sbjct: 270 KDPQYLAKNKIRLYDQSGQEVAPESIDWNTDDAVKLMFRQDPGKINAMSSTKINFHNQYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTAGWDRQNIESTIKSGTNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           +LA  VP+HFVYI+AWS  D ++QFRDDIY +D  
Sbjct: 390 QLADPVPLHFVYITAWSTGDGVVQFRDDIYKMDGA 424


>gi|306841990|ref|ZP_07474664.1| peptidoglycan-binding protein [Brucella sp. BO2]
 gi|306287918|gb|EFM59335.1| peptidoglycan-binding protein [Brucella sp. BO2]
          Length = 433

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/394 (50%), Positives = 270/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPQYLTKNKIRLYDQSGQEVLPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|306843707|ref|ZP_07476307.1| peptidoglycan-binding protein [Brucella sp. BO1]
 gi|306276017|gb|EFM57726.1| peptidoglycan-binding protein [Brucella sp. BO1]
          Length = 433

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/394 (50%), Positives = 270/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDAMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPQYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|254718880|ref|ZP_05180691.1| peptidoglycan binding domain-containing protein [Brucella sp.
           83/13]
 gi|265983867|ref|ZP_06096602.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|306838784|ref|ZP_07471617.1| peptidoglycan-binding protein [Brucella sp. NF 2653]
 gi|264662459|gb|EEZ32720.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|306406135|gb|EFM62381.1| peptidoglycan-binding protein [Brucella sp. NF 2653]
          Length = 433

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/394 (50%), Positives = 270/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPQYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|23501649|ref|NP_697776.1| peptidoglycan-binding protein [Brucella suis 1330]
 gi|23347568|gb|AAN29691.1| peptidoglycan-binding protein, putative [Brucella suis 1330]
          Length = 433

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/394 (50%), Positives = 270/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAACIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|161618731|ref|YP_001592618.1| peptidoglycan binding domain-containing protein [Brucella canis
           ATCC 23365]
 gi|254701537|ref|ZP_05163365.1| peptidoglycan binding domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|254704086|ref|ZP_05165914.1| peptidoglycan binding domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|254709878|ref|ZP_05171689.1| peptidoglycan binding domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|254713879|ref|ZP_05175690.1| peptidoglycan binding domain-containing protein [Brucella ceti
           M644/93/1]
 gi|254717064|ref|ZP_05178875.1| peptidoglycan binding domain-containing protein [Brucella ceti
           M13/05/1]
 gi|256031370|ref|ZP_05444984.1| peptidoglycan binding domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|256060880|ref|ZP_05451040.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|256369195|ref|YP_003106703.1| peptidoglycan-binding protein, putative [Brucella microti CCM 4915]
 gi|260566666|ref|ZP_05837136.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
 gi|261218874|ref|ZP_05933155.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|261317420|ref|ZP_05956617.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|261321627|ref|ZP_05960824.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261752087|ref|ZP_05995796.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|261754746|ref|ZP_05998455.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
 gi|161335542|gb|ABX61847.1| Peptidoglycan-binding domain 1 protein [Brucella canis ATCC 23365]
 gi|255999355|gb|ACU47754.1| peptidoglycan-binding protein, putative [Brucella microti CCM 4915]
 gi|260156184|gb|EEW91264.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
 gi|260923963|gb|EEX90531.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|261294317|gb|EEX97813.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261296643|gb|EEY00140.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|261741840|gb|EEY29766.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|261744499|gb|EEY32425.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
          Length = 433

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/394 (50%), Positives = 270/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|260563801|ref|ZP_05834287.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
 gi|260153817|gb|EEW88909.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
          Length = 433

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/394 (50%), Positives = 270/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|225852279|ref|YP_002732512.1| peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
 gi|256044450|ref|ZP_05447354.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256113294|ref|ZP_05454162.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256264215|ref|ZP_05466747.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
 gi|225640644|gb|ACO00558.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
 gi|263094459|gb|EEZ18281.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
 gi|326408784|gb|ADZ65849.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M28]
 gi|326538502|gb|ADZ86717.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M5-90]
          Length = 433

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/394 (50%), Positives = 270/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|148558991|ref|YP_001258743.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
 gi|261324878|ref|ZP_05964075.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|265988457|ref|ZP_06101014.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
 gi|148370248|gb|ABQ60227.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
 gi|261300858|gb|EEY04355.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|264660654|gb|EEZ30915.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
          Length = 446

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/394 (50%), Positives = 270/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 46  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 102

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 103 VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 162

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 163 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 222

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 223 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 282

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 283 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 342

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 343 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 402

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 403 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|294852125|ref|ZP_06792798.1| peptidoglycan binding domain-containing protein [Brucella sp. NVSL
           07-0026]
 gi|294820714|gb|EFG37713.1| peptidoglycan binding domain-containing protein [Brucella sp. NVSL
           07-0026]
          Length = 433

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/394 (49%), Positives = 271/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  A+NV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAVNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV +E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPLESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|265990871|ref|ZP_06103428.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265994707|ref|ZP_06107264.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|262765820|gb|EEZ11609.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263001655|gb|EEZ14230.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 446

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/394 (50%), Positives = 270/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 46  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 102

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 103 VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 162

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 163 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 222

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 223 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 282

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 283 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 342

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 343 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 402

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 403 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|17987476|ref|NP_540110.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
 gi|17983172|gb|AAL52374.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
          Length = 400

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/393 (50%), Positives = 269/393 (68%), Gaps = 7/393 (1%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAIA 83
           +V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI 
Sbjct: 1   MVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAIV 57

Query: 84  FYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A+
Sbjct: 58  QYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAAL 117

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNIP 201
           K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNIP
Sbjct: 118 KRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNIP 177

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           AA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R+
Sbjct: 178 AARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMRK 237

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNT 321
           DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++    
Sbjct: 238 DPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYAV 297

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
           YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP++
Sbjct: 298 YMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPIQ 357

Query: 382 LATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 358 LADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 390


>gi|254707013|ref|ZP_05168841.1| peptidoglycan binding domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261314480|ref|ZP_05953677.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|261303506|gb|EEY07003.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
          Length = 433

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/394 (49%), Positives = 270/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E +DWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESMDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|256159492|ref|ZP_05457260.1| peptidoglycan binding domain-containing protein [Brucella ceti
           M490/95/1]
 gi|256254778|ref|ZP_05460314.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|260168504|ref|ZP_05755315.1| peptidoglycan-binding protein, putative [Brucella sp. F5/99]
 gi|261757974|ref|ZP_06001683.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
 gi|261737958|gb|EEY25954.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
          Length = 433

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/394 (50%), Positives = 269/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +   VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPVVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|225627262|ref|ZP_03785299.1| peptidoglycan-binding protein [Brucella ceti str. Cudo]
 gi|261221958|ref|ZP_05936239.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|265997921|ref|ZP_06110478.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
 gi|225617267|gb|EEH14312.1| peptidoglycan-binding protein [Brucella ceti str. Cudo]
 gi|260920542|gb|EEX87195.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|262552389|gb|EEZ08379.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
          Length = 446

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/394 (50%), Positives = 269/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 46  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 102

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +   VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 103 VQYTDIASRGGWPLVPGNARLQIGVNDPVVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 162

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 163 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 222

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 223 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 282

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 283 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 342

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 343 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 402

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 403 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|62289715|ref|YP_221508.1| peptidoglycan-binding protein [Brucella abortus bv. 1 str. 9-941]
 gi|82699644|ref|YP_414218.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis biovar Abortus 2308]
 gi|189023964|ref|YP_001934732.1| peptidoglycan binding domain protein [Brucella abortus S19]
 gi|254697160|ref|ZP_05158988.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           2 str. 86/8/59]
 gi|254730056|ref|ZP_05188634.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           4 str. 292]
 gi|260545531|ref|ZP_05821272.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
 gi|260757741|ref|ZP_05870089.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260761566|ref|ZP_05873909.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|62195847|gb|AAX74147.1| peptidoglycan-binding protein, hypothetical [Brucella abortus bv. 1
           str. 9-941]
 gi|82615745|emb|CAJ10741.1| Putative peptidoglycan binding domain 1:Twin-arginine translocation
           pathway signal [Brucella melitensis biovar Abortus 2308]
 gi|189019536|gb|ACD72258.1| Putative peptidoglycan binding domain protein [Brucella abortus
           S19]
 gi|260096938|gb|EEW80813.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
 gi|260668059|gb|EEX54999.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260671998|gb|EEX58819.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 433

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/394 (49%), Positives = 269/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|254693508|ref|ZP_05155336.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           3 str. Tulya]
 gi|261213768|ref|ZP_05928049.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915375|gb|EEX82236.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 433

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/394 (49%), Positives = 269/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQNIEATIKSGLNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|237815203|ref|ZP_04594201.1| peptidoglycan-binding protein [Brucella abortus str. 2308 A]
 gi|237790040|gb|EEP64250.1| peptidoglycan-binding protein [Brucella abortus str. 2308 A]
          Length = 446

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/394 (49%), Positives = 269/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 46  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 102

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 103 VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 162

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 163 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 222

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 223 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 282

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 283 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 342

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 343 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQNIEATIKSGVNTPI 402

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 403 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|163843034|ref|YP_001627438.1| peptidoglycan binding domain-containing protein [Brucella suis ATCC
           23445]
 gi|163673757|gb|ABY37868.1| Peptidoglycan-binding domain 1 protein [Brucella suis ATCC 23445]
          Length = 433

 Score =  395 bits (1015), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/409 (48%), Positives = 275/409 (67%), Gaps = 12/409 (2%)

Query: 15  FVYLILPMGLSLVEKPIHAS-----VLDEIINESYHSIVNDRFDNFLARVDMG--IDSDI 67
           F+      GLS+    + +S     VL ++I+       +D+FD   AR   G  + ++ 
Sbjct: 18  FLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQ 74

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDP 126
           P++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL  
Sbjct: 75  PVLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQ 134

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
             GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L
Sbjct: 135 EAGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPL 194

Query: 187 L-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
             +     R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW 
Sbjct: 195 ANDTTQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWT 254

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQD GKI
Sbjct: 255 APKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDSGKI 314

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NAM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R
Sbjct: 315 NAMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDR 374

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 375 QNIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|254689025|ref|ZP_05152279.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           6 str. 870]
 gi|256257275|ref|ZP_05462811.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           9 str. C68]
 gi|260754520|ref|ZP_05866868.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|297248121|ref|ZP_06931839.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
 gi|260674628|gb|EEX61449.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|297175290|gb|EFH34637.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
          Length = 433

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/394 (49%), Positives = 268/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 33  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL    ++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADAVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|260883548|ref|ZP_05895162.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260873076|gb|EEX80145.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
          Length = 446

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/394 (49%), Positives = 268/394 (68%), Gaps = 7/394 (1%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAI 82
           ++V       VL ++I+       +D+FD   AR   G  + ++ P++S +T+A  + AI
Sbjct: 46  AMVSSAYAQQVLSDVISSPRRGNWDDQFD---ARATGGRRVATNQPVLSPQTVADIQNAI 102

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 103 VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 162

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNI 200
           +K FQ RHGL    ++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 163 LKRFQARHGLPADAVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 222

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 223 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 282

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 283 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 342

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 343 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQNIEATIKSGVNTPI 402

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 403 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|218662321|ref|ZP_03518251.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli IE4771]
          Length = 495

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/367 (51%), Positives = 259/367 (70%), Gaps = 5/367 (1%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
           S LD ++N       +D+FD   A R    + S+ PI+  +++A  ++AI  YQ I + G
Sbjct: 36  SALDGLLNAPRRGNWDDQFDAKAASRTATAVVSNTPILGPQSVASAQQAIMQYQQIAAAG 95

Query: 93  GWPEL--PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GWPE+    + L LG S  +VQ LR+RL I+GDL    GLS AFD+YV+ AVK FQ RHG
Sbjct: 96  GWPEVNPGDQRLQLGVSHPAVQALRQRLAITGDLPREAGLSSAFDSYVDGAVKRFQARHG 155

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G++   TL+AMN+P D+R++QL  N++R++   E  +G R+++VNIPAA +EAVE+
Sbjct: 156 LPADGVLGEFTLKAMNIPADVRLQQLNTNIVRLQTFPED-LGRRHLMVNIPAAYVEAVED 214

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ N 
Sbjct: 215 GSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKNA 274

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
           I +ID KG EV  E VDWN  E PN +FRQDPGKINAMASTKI FY++N  YMHDTP+  
Sbjct: 275 IRLIDGKGNEVAPETVDWNG-EAPNLMFRQDPGKINAMASTKINFYNKNGEYMHDTPQQG 333

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  +E+V+ +   TP+KLA EVPV+F
Sbjct: 334 LFNKLMRFESSGCVRVQNVRDLTNWLLRETPGWSRQQMEQVIASGVNTPIKLAAEVPVYF 393

Query: 391 VYISAWS 397
           VYISAW 
Sbjct: 394 VYISAWG 400


>gi|13476933|ref|NP_108502.1| hypothetical protein mlr8397 [Mesorhizobium loti MAFF303099]
 gi|14027695|dbj|BAB54288.1| mlr8397 [Mesorhizobium loti MAFF303099]
          Length = 422

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/406 (48%), Positives = 271/406 (66%), Gaps = 8/406 (1%)

Query: 14  FFVYLILPMGLSLVEKPIHAS-VLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPII 70
           FF+     +  ++V     A  V+ +I+  S     +D+FD   AR   G  + S +PI 
Sbjct: 12  FFLSGASLLAAAMVAGRASAQDVIGDILKSSARGNWDDQFD---ARASEGGKVASTLPIF 68

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           S +T+A TE+A+A YQ+I+ +GGW E+P  + L LG     V  LR+RL++SGDL  S G
Sbjct: 69  STQTVAFTEQAVAQYQNIVGQGGWVEVPATKKLELGVDDPDVVPLRKRLMVSGDLSQSAG 128

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +S AFD+YV+SAVK FQ+RHGL   G +   T  AMNV   +R+ QLQ NL R+K+    
Sbjct: 129 ISTAFDSYVDSAVKRFQLRHGLPADGSMGKYTYAAMNVSAQIRLGQLQTNLQRLKEK-AG 187

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +G RYVLV+IPAA +EAVEN +V LR T IVG++DRQTPI++S+IN I+ NPYW  P S
Sbjct: 188 TLGSRYVLVDIPAAQIEAVENDRVVLRHTAIVGKIDRQTPIVNSKINEIIVNPYWNAPVS 247

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I++KD++ L+R+DP YLK+++I +    G EV    VDW++ +   + FRQDPG  NAMA
Sbjct: 248 IVRKDIIPLMRKDPNYLKNSHIRLFAPDGSEVDPMNVDWSTDDAAKYRFRQDPGSENAMA 307

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
           S KI F S +  YMHDTP+  LF  ++RF++SGCVRV+N+ DL  W+L+DTP W R H E
Sbjct: 308 SVKINFPSPDGVYMHDTPQQSLFGKMMRFDSSGCVRVQNVRDLVTWILRDTPGWDRQHFE 367

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             +KT + TP+++   VPVHF+Y+SAWS    ++QFRDD+Y LD  
Sbjct: 368 AAIKTGQNTPIQVTNPVPVHFLYLSAWSTGPGVVQFRDDVYALDGA 413


>gi|110633486|ref|YP_673694.1| twin-arginine translocation pathway signal [Mesorhizobium sp. BNC1]
 gi|110284470|gb|ABG62529.1| Twin-arginine translocation pathway signal [Chelativorans sp. BNC1]
          Length = 419

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/387 (47%), Positives = 262/387 (67%), Gaps = 7/387 (1%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGID---SDIPIISKETIAQTEKAIAFYQDILS 90
           +  D IIN     + +D+FD   A++  G D   S +P+++ +T    E+AIA Y +I++
Sbjct: 28  NAFDAIINAPRRGVWDDQFD---AQISSGRDRVISYLPVLNPQTAVHVEQAIAGYSNIVA 84

Query: 91  RGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
            GGWP++P  + L LG     V+ LR RL++SGDL P  G+S AFD+YV+ A+K FQ+RH
Sbjct: 85  SGGWPQVPATKKLQLGVIDPDVEALRRRLMVSGDLSPRAGMSPAFDSYVDQALKRFQVRH 144

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G+    T  A+NV   +R+ QLQ NL R++++  +++G R+V+VNIPAA +EAVE
Sbjct: 145 GLPADGVTGRYTFSALNVSAPVRLGQLQTNLGRLREMTSKQLGNRFVMVNIPAAQIEAVE 204

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           NG+V  R T +VG++DRQTP+L S+IN I+ NPYW  P SI++KD++ L+R+DP YL DN
Sbjct: 205 NGRVVSRHTAVVGKIDRQTPVLSSKINEIILNPYWNAPVSIVRKDIIPLMRKDPNYLTDN 264

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           NI MI   G EV    +DW++ E   + FRQDPGKINAMAS KI F +++  YMHDTP+ 
Sbjct: 265 NIRMIAPDGSEVDPLTIDWSTEEAAKYRFRQDPGKINAMASVKINFPNQHAVYMHDTPQQ 324

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF +  RF +SGCVRV+N+ DL  WLL+DT  W R  IE  +++++   + +A  VPV+
Sbjct: 325 SLFRDQERFHSSGCVRVQNVRDLVAWLLRDTQGWDRRRIETTIQSQEDIHINVADPVPVY 384

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVH 416
           FVY+SAWS  D ++ FRDDIYG D   
Sbjct: 385 FVYVSAWSTGDGVVHFRDDIYGFDGAE 411


>gi|260466848|ref|ZP_05813032.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259029350|gb|EEW30642.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 417

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/383 (49%), Positives = 263/383 (68%), Gaps = 7/383 (1%)

Query: 35  VLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAIAFYQDILSRG 92
           V+ +I+  S     +D+FD   AR   G  + S +PI S +T+A TE+A+A YQ+I+ +G
Sbjct: 29  VIGDILKSSARGNWDDQFD---ARASEGGKVASTLPIFSPQTVAFTEQAVAQYQNIVGQG 85

Query: 93  GWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           GW ++P  + L LG     V  LR+RL+I+GDL  S G+S AFD+YV+SAVK FQ+RHGL
Sbjct: 86  GWVDVPATKKLELGVDDPDVVPLRKRLMIAGDLSQSAGISTAFDSYVDSAVKRFQLRHGL 145

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
              G +   T  AMNV   +R+ QLQ NL R+K+     +G RYVLV+IPAA +EAVEN 
Sbjct: 146 PADGSMGKYTYAAMNVSAQIRLGQLQTNLQRLKEK-AGTLGSRYVLVDIPAAQIEAVEND 204

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +V LR T IVG++DRQTPI++S+IN I+ NPYW  P SI++KD++ L+R+DP YLK+++I
Sbjct: 205 RVVLRHTAIVGKIDRQTPIVNSKINEIIVNPYWNAPVSIVRKDIIPLMRKDPDYLKNSHI 264

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            +    G EV    VDW++ +   + FRQDPG  NAMAS KI F S +  YMHDTP+  L
Sbjct: 265 RLFAPDGSEVDPMNVDWSTDDAAKYRFRQDPGSENAMASVKINFPSPDGVYMHDTPQQSL 324

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F  ++RF++SGCVRV+N+ DL  W+L+DTP W R H E  +KT + TP+++   VPVHF+
Sbjct: 325 FGKMMRFDSSGCVRVQNVRDLVTWILRDTPGWDRQHFEAAIKTGQNTPIQVTNPVPVHFL 384

Query: 392 YISAWSPKDSIIQFRDDIYGLDN 414
           Y+SAWS    ++QFRDD+Y LD 
Sbjct: 385 YLSAWSTGPGVVQFRDDVYALDG 407


>gi|319784167|ref|YP_004143643.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170055|gb|ADV13593.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 417

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/383 (48%), Positives = 261/383 (68%), Gaps = 7/383 (1%)

Query: 35  VLDEIINESYHSIVNDRFDNFLARVDMG--IDSDIPIISKETIAQTEKAIAFYQDILSRG 92
           V+ +I+  S     +D+FD   AR   G  + S +PI S +T+A TE+A+  YQ+I+ +G
Sbjct: 29  VIGDILKSSARGNWDDQFD---ARASEGGKVASTLPIFSPQTVAFTEQAVGQYQNIVGQG 85

Query: 93  GWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           GW E+P  + L LG     V  LR+RL++SGDL  S G+S AFD+YV+SAVK FQ+RHGL
Sbjct: 86  GWVEVPATKKLQLGVDDPDVVPLRKRLMVSGDLSQSAGISTAFDSYVDSAVKRFQLRHGL 145

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
              G +   T  AMNV   +R+ QLQ NL R+++     +G RYVLV+IPAA +EAVEN 
Sbjct: 146 PADGSMGKYTYAAMNVSAQIRLGQLQTNLQRLREK-AGTLGSRYVLVDIPAAQVEAVEND 204

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +V LR T IVG++DRQTPI++S+I  I+ NPYW  P SI++KD++ L+R++P YLK+++I
Sbjct: 205 RVVLRHTAIVGKIDRQTPIVNSKITEIIVNPYWNAPVSIVRKDIIPLMRKNPDYLKNSHI 264

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            +    G EV    VDW++ +   + FRQDPG  NAMAS KI F S +  YMHDTP+  L
Sbjct: 265 RLFAPDGSEVDPMNVDWSTDDAAKYRFRQDPGSENAMASVKINFPSPDGVYMHDTPQQSL 324

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F  ++RF++SGCVRV+N+ DL  W+L+DTP W R H E  +KT + TP+++   VPVHF+
Sbjct: 325 FGKMLRFDSSGCVRVQNVRDLVTWILRDTPGWDRQHFEAAIKTGENTPIQVTNPVPVHFL 384

Query: 392 YISAWSPKDSIIQFRDDIYGLDN 414
           Y+SAWS    ++QFRDD+Y LD 
Sbjct: 385 YLSAWSTGPGVVQFRDDVYALDG 407


>gi|90419407|ref|ZP_01227317.1| putative peptidoglycan-binding protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336344|gb|EAS50085.1| putative peptidoglycan-binding protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 447

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 186/384 (48%), Positives = 256/384 (66%), Gaps = 2/384 (0%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG 93
           + L E++        +D+FD   + V   + S+ P+ S+ TI   ++AI  Y  I+  GG
Sbjct: 38  NALGELLQAPTRGNWDDQFDTRGSNVRQ-VASNSPVFSENTIYSLQEAINSYSAIVQGGG 96

Query: 94  WPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP +P    L +G  S +V  LR+RL I+GDL  + G S AFD YV++AVK FQ RHGL 
Sbjct: 97  WPMVPEGETLKIGVQSRTVPVLRQRLAIAGDLGNNAGGSPAFDTYVDAAVKRFQARHGLP 156

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G+V   T +AMNV  DLR+ QLQ NL R+++ L   +G RYV+VNIPAAS+EAVENG+
Sbjct: 157 ADGVVSGHTYKAMNVGADLRLGQLQTNLQRLREKLATDLGQRYVVVNIPAASIEAVENGR 216

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V  R T +VG+VDRQTPIL SRI  +  NPYW  P SI++KD++ L+++DP YL+ N I 
Sbjct: 217 VVQRHTAVVGKVDRQTPILDSRITNLNLNPYWHAPVSIVRKDIIPLMQKDPTYLERNAIR 276

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           + D  G+E+  + +DWN+ E   ++FRQDPGKINAMAS KI F + +  YMHDTP+  LF
Sbjct: 277 IFDGNGQEIPPQTIDWNTEEAVKYLFRQDPGKINAMASVKINFPNPHAVYMHDTPQQSLF 336

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           + ++RFE+SGCVRV+N+ DL VWL +D P W R  IE+V+  R+   + L   VPVHF Y
Sbjct: 337 SELMRFESSGCVRVQNVRDLIVWLARDVPGWDRQRIEQVIAARERQDIDLLNPVPVHFTY 396

Query: 393 ISAWSPKDSIIQFRDDIYGLDNVH 416
           ++AW+   +++QFRDDIY  D V 
Sbjct: 397 VTAWATDPTVVQFRDDIYHRDGVE 420


>gi|114704835|ref|ZP_01437743.1| hypothetical protein FP2506_07861 [Fulvimarina pelagi HTCC2506]
 gi|114539620|gb|EAU42740.1| hypothetical protein FP2506_07861 [Fulvimarina pelagi HTCC2506]
          Length = 444

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 183/405 (45%), Positives = 260/405 (64%), Gaps = 2/405 (0%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
            F       +GL +       S LD ++        +D+FD   +     + S  PI S+
Sbjct: 15  AFLSGTTAALGLGMTGFASAQSGLDGLLGARGRGNWDDQFDTRGSSARE-VSSLNPIFSQ 73

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +T+  T+ A+  Y  I+++GGWP +P R  L LG  +  V+ LR+RL ISGDL P    S
Sbjct: 74  QTLYSTQAAMQTYNQIVAQGGWPTVPARYVLKLGEVTPDVEVLRQRLAISGDLSPQASRS 133

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
            AFD YVE+AVK FQ RHGL   G+V     +A+NVP DLR+ QLQ N  R++  L++++
Sbjct: 134 PAFDTYVEAAVKRFQARHGLPADGVVGEHAYKALNVPADLRLFQLQTNAARLQNQLQEQL 193

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
             RYV+VNIPAA++EAVENG++  R T +VG+VDRQTPIL S+I  +  NPYW  P SI+
Sbjct: 194 PYRYVMVNIPAAAIEAVENGQIVQRHTAVVGKVDRQTPILTSKITNLNLNPYWHAPASIV 253

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
           +KD++ L+RQDP YL+ N IH+ +  G+EV  + +DW+S E  +++FRQ+PG  +AMAS 
Sbjct: 254 RKDIIPLVRQDPTYLQRNGIHIFNGNGQEVPPQSIDWSSDEAVSYLFRQNPGPNSAMASV 313

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           KI F + +  YMHDTP+  LF+ ++RFE+SGCVRV+N+ DL VWL +D P W+R  IE V
Sbjct: 314 KINFPNEHAVYMHDTPQKGLFSELMRFESSGCVRVQNVRDLIVWLARDEPNWNRQAIERV 373

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           +  R    + LA  VPV+F Y++ W+   +++QFRDDIY  D   
Sbjct: 374 ISARSREDIDLANPVPVYFTYVTGWATDPNVVQFRDDIYHRDGAE 418


>gi|304391945|ref|ZP_07373887.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303296174|gb|EFL90532.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 421

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 182/383 (47%), Positives = 248/383 (64%), Gaps = 3/383 (0%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG 93
           + +D I+N       ND FD   A     + +  PI + +TI   ++AIA Y +I+  GG
Sbjct: 33  TAIDRILNAPNRDSWNDSFD-ATAPTKAKVVTSTPIFAPQTIDSVQQAIAEYSNIVRNGG 91

Query: 94  WPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP +P  + L LG S  +V+ LR+RLIISGDL    G+S  FD YV++AVK FQ RHGL 
Sbjct: 92  WPRVPAGKKLELGVSDDAVRALRQRLIISGDLPRGAGVSPQFDTYVDAAVKRFQARHGLP 151

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++   +  A+NV   +R+ QLQ NL+R+K +    +G RYV+VNIPAA +EAVE G+
Sbjct: 152 SDGVMGRYSFAALNVSAPIRLGQLQTNLVRLKAM-SGYLGDRYVMVNIPAAEIEAVELGR 210

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V  R T IVGR  RQTPIL+S+I  +  NPYW  P+SII KD++ L+R++P YL +N I 
Sbjct: 211 VAQRHTAIVGRESRQTPILNSKIYELNLNPYWTAPKSIILKDIIPLMRKNPNYLTENKIL 270

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           + D   +EV  + V+WN+ E     FRQ+PG+INAM S KI F + +  YMHDTP+  +F
Sbjct: 271 LFDGNSQEVSPQSVNWNTEEAVKLRFRQEPGRINAMGSVKINFPNPHAVYMHDTPQKGIF 330

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           N ++RFE+SGCVRV+N+ DL VWL KDTP  SR +IE ++ +   T +KL   VPV+F Y
Sbjct: 331 NKLLRFESSGCVRVKNVRDLLVWLAKDTPGASRSNIESIIASGDRTDLKLTAPVPVYFAY 390

Query: 393 ISAWSPKDSIIQFRDDIYGLDNV 415
           +SAWS    +  FRDDIY  D V
Sbjct: 391 VSAWSNTSGVAHFRDDIYQRDGV 413


>gi|328543533|ref|YP_004303642.1| Twin-arginine translocation pathway signal [polymorphum gilvum
           SL003B-26A1]
 gi|326413277|gb|ADZ70340.1| Twin-arginine translocation pathway signal [Polymorphum gilvum
           SL003B-26A1]
          Length = 415

 Score =  348 bits (892), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 171/399 (42%), Positives = 260/399 (65%), Gaps = 5/399 (1%)

Query: 22  MGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            G+    + + AS L+ +   +      DRFD  +  ++  I S  P +S ET      A
Sbjct: 8   FGIGAGVQSVTASPLEALRQYNQRIEWEDRFDATMESLE-AIKSSKPTLSPETADYLAAA 66

Query: 82  IAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           I  YQ I+ +GGW ++      L +G    SV  LR RLI SGDL+ + GLS  FD+YV+
Sbjct: 67  INRYQFIVQQGGWGKVQSSRHGLRIGAQDASVVALRRRLIASGDLEQTAGLSDTFDSYVD 126

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +AV+ FQ+RHGL P G+V  +T+ A+NVP ++R++QL+ NL+R++ +    +G RYV+VN
Sbjct: 127 AAVRRFQVRHGLIPDGVVGQTTVVALNVPAEVRLQQLETNLVRLRSM-SGFLGDRYVMVN 185

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IPAA +EAVENG+V  R T +VG++DRQTPIL+S+I  + FNPYW +P SII+KD++  +
Sbjct: 186 IPAAEIEAVENGRVRSRHTAVVGKIDRQTPILNSKIYELNFNPYWTVPVSIIRKDLIPKM 245

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           ++DP+YL  N I + D K  E+  +++DWN+ E   + FRQ+PG IN++ S +I F++++
Sbjct: 246 KEDPEYLAKNKIRIFDWKNNELSWQQIDWNTDEATQYQFRQEPGDINSLGSVRINFHNQH 305

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD-TPTWSRYHIEEVVKTRKTT 378
             Y+HDTP   LF +  RF +SGCVRV+N+ +L  W+L+  TP WSR  ++E ++     
Sbjct: 306 QVYLHDTPSKSLFGSDYRFHSSGCVRVQNVRELVTWMLESTTPDWSRARVDETIRMGVRE 365

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
            VKL T+VP++  Y++AWS  + I+ FRDDIY  D ++ 
Sbjct: 366 DVKLKTQVPLYMTYVTAWSTDEGIVHFRDDIYNRDGLYA 404


>gi|182677877|ref|YP_001832023.1| peptidoglycan binding domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182633760|gb|ACB94534.1| Peptidoglycan-binding domain 1 protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 456

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 168/401 (41%), Positives = 260/401 (64%), Gaps = 12/401 (2%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVN--DRFDNFLARVDMGI-DSDIPIISKET 74
           ++L MGL L + P+  S     +   Y S      R+D      ++ +  S++P++S +T
Sbjct: 33  ILLAMGLCLSQLPLQVS---SALAGPYGSQAEWAQRYD---TDANLAVLRSNVPVLSVQT 86

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           +  TE+AI  Y++I++RGGW  +     L LG ++ +V  LR+RLI +GDLD S G S  
Sbjct: 87  LNATEQAIETYRNIVARGGWNRVSASATLKLGANNAAVTELRKRLIETGDLDASAGTSPI 146

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FD+YV++ V+ FQ RHGL  +G+V+  T+ AMNVP D+R+ QL+VNL+R++      +G 
Sbjct: 147 FDSYVDAGVRHFQARHGLAETGIVNRETVTAMNVPADVRLHQLEVNLVRLRSY-SGNLGE 205

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R+V+ NIPA ++E VENG V       VG++DRQ+P++ +R   I FNPYW +P SII+K
Sbjct: 206 RFVMANIPAMAVETVENGVVATHHIAGVGKIDRQSPVMMTRATDINFNPYWTVPASIIRK 265

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK-INAMASTK 312
           D++  +++DP YL D+ I + ++ G+E+   +V+WNS E  N+ FRQDPG  IN++   +
Sbjct: 266 DLIPRMQKDPNYLSDHKIRIFNKDGQELQSSQVNWNSLEATNYRFRQDPGGDINSLGVVR 325

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
           I   +    YMHDTPE  +F +  RF +SGC+RV+N+ D   WLLKDTP W R HI+E +
Sbjct: 326 INIANPYGVYMHDTPEKGVFGDDERFVSSGCIRVQNVRDYVTWLLKDTPGWDRAHIDEAI 385

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           ++ +    K+ + VPV++VY++AW+  D ++QFR+DIY  D
Sbjct: 386 RSGQRIDAKITSSVPVYWVYVTAWATPDGLVQFREDIYQRD 426


>gi|118587981|ref|ZP_01545391.1| hypothetical protein SIAM614_10408 [Stappia aggregata IAM 12614]
 gi|118439603|gb|EAV46234.1| hypothetical protein SIAM614_10408 [Stappia aggregata IAM 12614]
          Length = 434

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 160/369 (43%), Positives = 243/369 (65%), Gaps = 6/369 (1%)

Query: 53  DNFLARVD--MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI--RPLHLGNSS 108
           DNF    D    + S  P +S +T      AI  YQ I+  GGW  +    + L +G   
Sbjct: 59  DNFDIATDHITEVKSSAPTLSPQTADYIAAAIDRYQRIVQAGGWGTVSTGGKALRIGAKD 118

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V  LR RL++SGDL+   GLS  FD+YV++ ++ FQ+RHGL P G++  ST+ A+N+P
Sbjct: 119 PRVVELRRRLMVSGDLEQQAGLSDTFDSYVDAGLRRFQLRHGLIPDGVMGDSTVTALNIP 178

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            D+R+RQL+ N++R++ +    +G RYV+VNIPAA +EAVENG V  R T +VG++DRQT
Sbjct: 179 ADVRLRQLETNMIRMRSM-SGFLGDRYVMVNIPAAEIEAVENGMVRSRHTAVVGKIDRQT 237

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           PIL+S+I  + FNPYW +P+SII+KD++  +++DPQYL  NNI + D    E+  +++DW
Sbjct: 238 PILNSKIYELNFNPYWTVPKSIIRKDLIPKMKEDPQYLAKNNIRIFDWSNNELTWQQIDW 297

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           N+ E   + F QDPG  N++ S +I F++++  Y+HDTP   LF    RF +SGCVRV+N
Sbjct: 298 NTDEATQYRFTQDPGSENSLGSVRINFHNKHQVYLHDTPSKTLFGEANRFHSSGCVRVQN 357

Query: 349 IIDLDVWLLKD-TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
           + +L  WLL+  TP W R  ++ V++T +   VKL +++P++  YI+AW+  D ++ FRD
Sbjct: 358 VRELVTWLLQSTTPDWDRGRVDGVIRTGEREDVKLKSQIPLYLTYITAWANADGVVHFRD 417

Query: 408 DIYGLDNVH 416
           DIY  D+++
Sbjct: 418 DIYDRDDLY 426


>gi|254469893|ref|ZP_05083298.1| twin-arginine translocation pathway signal [Pseudovibrio sp. JE062]
 gi|211961728|gb|EEA96923.1| twin-arginine translocation pathway signal [Pseudovibrio sp. JE062]
          Length = 448

 Score =  338 bits (867), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 168/378 (44%), Positives = 247/378 (65%), Gaps = 5/378 (1%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSS 108
           D FD  ++ ++  ID   PIISK+T      AI  Y+ I   GGWPE+  +  L +G  +
Sbjct: 69  DTFDEGVSSLEQ-IDFVAPIISKQTTQYMIDAILDYERIALNGGWPEVSTKKVLRIGMRA 127

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            ++  LR+RLI+SGD+    G+S  FD+YV+SAV+ FQ+RHGL P G+V  +T+ AMNVP
Sbjct: 128 PAIASLRQRLIVSGDMAQHAGVSEVFDSYVDSAVRRFQLRHGLTPDGVVGRATVIAMNVP 187

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           V++R++QL+ NL R+  L +  +   YV VNIPAA +E VENG+V  R T +VG+ DRQ+
Sbjct: 188 VEVRLQQLRTNLERVSALAD-NVSDTYVNVNIPAARIEVVENGRVRSRHTAVVGKQDRQS 246

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           PIL S I  + FNPYW +P SII+KD++  +++DPQYL  NNIH+ D  GKE   +E+DW
Sbjct: 247 PILSSAIYEVNFNPYWTVPVSIIRKDLIPKMQKDPQYLAKNNIHIFDWYGKEKQWQEIDW 306

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           N+ E   + F Q+PG+ N+M S +I F + +  Y+HDTPE  LF    RF +SGCVRV+N
Sbjct: 307 NTDEATKYRFTQEPGEGNSMGSIRINFNNTHQVYLHDTPEQSLFGEGYRFHSSGCVRVQN 366

Query: 349 IIDLDVWLLKD-TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
           + +L  WLL   TP W+R  ++  + + +   VK+ + +P+H  Y++AW+  D ++ FRD
Sbjct: 367 VRELVTWLLGSTTPEWTRSRVDATINSGERLDVKMKSRIPLHLSYVTAWALSDGMVHFRD 426

Query: 408 DIYGLDNVHVGII-PLPE 424
           DIY  D ++   + PL +
Sbjct: 427 DIYDKDGLYSASVDPLAQ 444


>gi|307946606|ref|ZP_07661941.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307770270|gb|EFO29496.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 437

 Score =  335 bits (860), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 163/371 (43%), Positives = 246/371 (66%), Gaps = 6/371 (1%)

Query: 53  DNFLARVD--MGIDSDIPIISKETIAQTEKAIAFYQDI--LSRGGWPELPIRPLHLGNSS 108
           D+F + V     ++S  P +S ET      AI  Y  I  L   G      R L +G+  
Sbjct: 57  DDFQSTVQSLKALESSAPTLSPETADYMGVAIDRYSRIVQLGGWGGVTSGGRALRIGSKD 116

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V  LR+RL+ SGDL  + G+S  FD+YV++AV+ FQ+RHGL P G+V  ST+ A+NVP
Sbjct: 117 NRVVELRQRLMASGDLQQNAGMSSVFDSYVDAAVRRFQLRHGLLPDGVVGESTIVALNVP 176

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            ++R+RQL+ NL+R++ +    +G RYV+VNIPAA +EAVE G+V  R T +VG++DRQT
Sbjct: 177 ANVRLRQLETNLVRLRSM-SGFLGDRYVMVNIPAAEIEAVEYGRVRSRHTAVVGKIDRQT 235

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           PIL+S+I  + FNPYW +P SII+KD++  ++QDPQYL  N I + D KG E+  +++DW
Sbjct: 236 PILNSKIYELNFNPYWTVPVSIIRKDLIPKMKQDPQYLAKNRIRIFDWKGNELAWQQIDW 295

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           N+ E   + FRQ+PG+IN++ S +I F++++  Y+HDTP   LF +  RF +SGCVRV+N
Sbjct: 296 NTDEATKYQFRQEPGEINSLGSVRINFHNKHQVYLHDTPSKTLFGSDYRFHSSGCVRVQN 355

Query: 349 IIDLDVWLLKD-TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
           + ++  WLL+  TP W R  +++V++T     V+L + +P++  YI+AW+  D +I FRD
Sbjct: 356 VREMVTWLLQSTTPDWDRARVDQVIRTGAREDVRLKSSIPLYLTYITAWANADGVIHFRD 415

Query: 408 DIYGLDNVHVG 418
           D+Y  D ++ G
Sbjct: 416 DVYNRDGLYNG 426


>gi|296444378|ref|ZP_06886343.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296258025|gb|EFH05087.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 443

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 158/356 (44%), Positives = 240/356 (67%), Gaps = 3/356 (0%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGD 123
           S  PI+S +T+A TE AI   QDI++RGGWP +P  + L LG++S +V  LR RL+ISGD
Sbjct: 54  STTPILSTQTVAATEAAIQQMQDIVARGGWPMVPAGQQLKLGSNSPAVSILRRRLMISGD 113

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           +    G S  FD+YVE+AV+ FQ RHG++ +G+V   T  AMNVP + R+RQL+ NL+R+
Sbjct: 114 IGQDAGASPIFDSYVEAAVRRFQARHGVNATGVVAQQTFVAMNVPAEARMRQLETNLIRL 173

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +    + +G RYV  NIPAAS+E VENG V       VG++DRQ+P++ ++  +I FNP+
Sbjct: 174 RSF-SRDLGNRYVTANIPAASVETVENGYVVTHHIAGVGKIDRQSPVMQTKAIQINFNPF 232

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD-P 302
           W +P S+I+KD++  ++ DP YL  N+I + ++ G E+  E+++WNS +  N+ FRQD  
Sbjct: 233 WTVPASVIRKDLIPKMQADPNYLTANHIRVYNKDGMELAPEQINWNSLDAMNYKFRQDIG 292

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   +I+  +    YMHDTP   +F +  RF +SGC+R++N+ D   WLLK+TP 
Sbjct: 293 GDFNSLGVVRIDIANPYGVYMHDTPAKGIFGDDFRFVSSGCIRLQNVRDYVAWLLKETPG 352

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           W R HI+EV+++ +   V++   VPV++VY++AW+  D +IQFRDDIY  D + + 
Sbjct: 353 WDRDHIDEVIRSGERVDVRITPAVPVYWVYVTAWAAPDGLIQFRDDIYQRDGLGLA 408


>gi|254502740|ref|ZP_05114891.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222438811|gb|EEE45490.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 408

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 154/357 (43%), Positives = 241/357 (67%), Gaps = 5/357 (1%)

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLII 120
           + S  P +S  T+     AI  YQ I+  GGW  +    + L +G     V ++R+RLII
Sbjct: 44  VKSYAPTLSPTTVDYIGAAITRYQSIVQMGGWGTVSTGGKALRIGMKDPRVVQVRQRLII 103

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           SGDL+   GLS  FD+YV++A++ FQ+RHGL P G++  ST+EA+N+P  +R+RQL+ NL
Sbjct: 104 SGDLEQQAGLSDTFDSYVDAALRRFQLRHGLIPDGVMGESTVEALNIPAYVRLRQLETNL 163

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +R++ +    +G RYV+VNIPAA +EAVE+G+V  R T +VG++DRQTPIL+S+I  + F
Sbjct: 164 VRVRSM-SGNLGDRYVMVNIPAAEIEAVEDGRVRSRHTAVVGKIDRQTPILNSKIYELNF 222

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSPEPPNFIFR 299
           NPYW +P SII+KD++  +++DP+YL  N I + + +  +EV  +++DWN+ E   + F 
Sbjct: 223 NPYWTVPVSIIRKDLIPKMKEDPEYLSRNKIRIFNWRDNQEVAWQQIDWNTDEATQYRFT 282

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           QDPG+ N++ S +I F++++  Y+HDTP   LF    RF +SGCVRV+N+ +L  WLL+ 
Sbjct: 283 QDPGQENSLGSVRINFHNKHQVYLHDTPSKTLFGEDYRFHSSGCVRVQNVRELVTWLLQS 342

Query: 360 -TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            TP W R  ++ V++T +   VKL   +P++  Y++AW+  D ++ FR+DIY  D++
Sbjct: 343 TTPDWDRTKVDSVIRTGEREDVKLKRSIPLYMTYVTAWANADGVVHFREDIYNRDDL 399


>gi|217978266|ref|YP_002362413.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217503642|gb|ACK51051.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 447

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 156/352 (44%), Positives = 234/352 (66%), Gaps = 3/352 (0%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGD 123
           S+ P++S++T+A TE+AI  Y+ I++ GGW  +P    L LG S  SV  LR+RL+ SGD
Sbjct: 56  SNTPVLSQQTLAATEQAIETYRQIVASGGWNMVPASNVLKLGVSGPSVVALRKRLVASGD 115

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           LD S G S  FD++VE+ VK FQ RHGL  +G+V   T  A+N   DLR+ QL++NL+R+
Sbjct: 116 LDASAGASPVFDSFVEAGVKHFQARHGLLETGLVSKDTFAALNATADLRLHQLEINLIRL 175

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +      +G R+V+ NIPA ++E VENG V       VG++DRQ+P++ ++   I FNP+
Sbjct: 176 RSY-SGNLGERFVMANIPAMAVETVENGAVATHHAAGVGKIDRQSPVMMTKATDINFNPF 234

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P S+I+KD++  ++++P YL ++ I + D+  +EV   ++DW + +  N+ +RQDPG
Sbjct: 235 WTMPPSLIKKDLIPRMQKNPDYLTEHKIRIFDKDNQEVPPSQIDWTTNQATNYRYRQDPG 294

Query: 304 K-INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
             IN++   +I   +    YMHDTPE  +F +  RF +SGC+RV+N+ D   WLLKDTP 
Sbjct: 295 GDINSLGVVRINISNPYGVYMHDTPEKGVFGDDFRFVSSGCIRVQNVRDYVAWLLKDTPG 354

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           W R HI+E +++ +    KLAT VPV++VYI+AWS  + +IQFRDDIY  D 
Sbjct: 355 WDREHIDEAIRSGQRIDAKLATPVPVYWVYITAWSTPEGLIQFRDDIYQRDG 406


>gi|323136642|ref|ZP_08071723.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322397959|gb|EFY00480.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 435

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 151/355 (42%), Positives = 240/355 (67%), Gaps = 3/355 (0%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGD 123
           S  PI+S +T+A TE AI  +++I++ GGWP++P    L LG SS +V  LR+RLI+SGD
Sbjct: 48  STTPILSTQTVAATEAAIEQFREIVANGGWPQVPAGHQLRLGVSSPAVSTLRKRLIVSGD 107

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           +    G S  FD+YVE+AV+ FQ RHG+  +G+V+  T  A+NVP + R+RQL+ NL+R+
Sbjct: 108 IGHETGTSPIFDSYVEAAVRRFQARHGIIETGVVNQQTFAALNVPAETRLRQLETNLVRL 167

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +    + +G RYV  NIPAA++E VENG+V       VG++DRQ+P++ ++  ++ FNP+
Sbjct: 168 RSF-SRDLGNRYVTANIPAATVETVENGQVVTHHIAGVGKIDRQSPVMQTKAIQVNFNPF 226

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD-P 302
           W +P S+I+KD++  ++ DP YL DN+I + +++G+E+  E+++W S +  N+ FRQD  
Sbjct: 227 WTVPASVIRKDLIPKMQADPNYLHDNHIRVYNKEGQELQPEQINWRSLDALNYKFRQDIG 286

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   +I+  +    YMHDTP   +F +  RF +SGC+R++N+ D   +LL++TP 
Sbjct: 287 GDFNSLGVVRIDIANPYGVYMHDTPAKGVFGDDFRFVSSGCIRLQNVRDYVAFLLRETPG 346

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           W R HI++V+ + +   VK+   VPV++VY++AW   D + QFRDDIY  D + V
Sbjct: 347 WDRDHIDQVIASGERVDVKITPPVPVYWVYVTAWGAPDGVTQFRDDIYQRDGLGV 401


>gi|170741295|ref|YP_001769950.1| peptidoglycan binding domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168195569|gb|ACA17516.1| Peptidoglycan-binding domain 1 protein [Methylobacterium sp. 4-46]
          Length = 426

 Score =  319 bits (818), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 154/353 (43%), Positives = 236/353 (66%), Gaps = 4/353 (1%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGD 123
           S+ PI+S +T+A TE+ I  Y+DI++RGGW P      L +G  S +V  LR+RLI+SGD
Sbjct: 50  SNTPILSPQTLAATEQMIERYRDIVARGGWQPVSGADRLRVGTKSPAVVALRQRLIVSGD 109

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           LDP+ G S  +D+YVE+ V+ FQ RHGL+ +G ++ +T++AMNVP D+R+RQL++N +R+
Sbjct: 110 LDPAAGSSPIYDSYVEAGVRRFQARHGLNETGAMNLTTVQAMNVPADVRLRQLELNAVRL 169

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +      +G RYV+VNIPAA +E VE   V  R    VG++DRQ+PI++++I  + FNPY
Sbjct: 170 RSY-SGNLGARYVIVNIPAALVETVEGDHVATRHAAGVGKIDRQSPIMNAKIQEVNFNPY 228

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P SII+KD++  ++++P YL DN I + D + +E+   +V+W S E   + FRQDPG
Sbjct: 229 WTVPASIIKKDLIPKMQKEPNYLTDNKIRIFDGE-REIAPSQVNWRSDEATRYRFRQDPG 287

Query: 304 -KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
             +N+M   +I   + +  YMHDTP   +F +  RF +SGCVRV+N+ D   W+L+ TP 
Sbjct: 288 VDLNSMGFVRINIPNPHGVYMHDTPAKGIFGDDFRFVSSGCVRVQNVRDYVAWILQGTPQ 347

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            +   IE ++++ +    +    +PV++ YI+AWS  D ++QFRDDIY  D V
Sbjct: 348 GNPETIEAIIQSGQRVDARPLAPIPVYWTYITAWSTPDGLVQFRDDIYKRDGV 400


>gi|170751743|ref|YP_001758003.1| peptidoglycan binding domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658265|gb|ACB27320.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 432

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 152/353 (43%), Positives = 233/353 (66%), Gaps = 4/353 (1%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD 125
           +PI+S +T+A TE+ +  Y+DI++RGGW ++     L +G+   +V  +R+RLI++GDLD
Sbjct: 56  VPILSPQTVASTEQMVERYKDIVARGGWRQVSGADHLRIGSRGPAVAAIRQRLIVTGDLD 115

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+ G S  +D+YV + VK FQ RHGL  +G +  +T +AMNVP D+R+RQL++N++R++ 
Sbjct: 116 PAAGSSGVYDSYVAAGVKRFQARHGLSQTGAMTMATQQAMNVPADVRLRQLEINVVRLRS 175

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                +G R+V+ NIPAA +E VENG+V       VG++DRQ+PI++++  +I FNP W 
Sbjct: 176 Y-SGDLGRRFVITNIPAALVETVENGQVVTLHAAGVGKIDRQSPIMNTKATQINFNPTWT 234

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK- 304
           +P SI++KD++  +++DP YL DN I ++   G EV  + V+W S E   + +RQD G  
Sbjct: 235 VPASIVKKDLIPKMQKDPNYLTDNKIRIL-SNGSEVSPKSVNWFSDEGTRYTYRQDSGAD 293

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N+M   +I   +    +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP W 
Sbjct: 294 FNSMGIVRINIPNPYGVFMHDTNTKGVFGDDFRFISSGCVRVQNVREYITWLLKDTPGWD 353

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           R  +EE +++ K     +A  VPV++ YI+AWS  D I+QFRDDIY  D V+V
Sbjct: 354 RQKVEEAIESGKRIDANIAQPVPVYWTYITAWSTPDGIVQFRDDIYKRDGVNV 406


>gi|220925145|ref|YP_002500447.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219949752|gb|ACL60144.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 426

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 154/353 (43%), Positives = 234/353 (66%), Gaps = 4/353 (1%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGD 123
           S+ PI+S +T+A TE+ I  Y+DI++RGGW P      L +G  S +V  LR+RLI SGD
Sbjct: 50  SNTPILSPQTLAATEQMIERYRDIVARGGWQPVSGAERLRVGARSPAVVALRQRLITSGD 109

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           LDP+ G S  +D+YVE+ V+ FQ RHGL+ +G ++ +T++AMNVP D+R+RQL++N +R+
Sbjct: 110 LDPAAGSSPVYDSYVEAGVRRFQARHGLNQTGAMNITTVQAMNVPADVRLRQLELNAVRL 169

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +      +G RYV+VNIPAA +E VE   V  R    VG++DRQ+PI++++I  + FNPY
Sbjct: 170 RSY-SGNLGARYVIVNIPAALVETVEGDHVATRHAAGVGKIDRQSPIMNAKIQEVNFNPY 228

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P SII+KD++  ++++P YL DN I + D   +E+   +V+W S E   + FRQDPG
Sbjct: 229 WTVPASIIKKDLIPKMQKEPNYLTDNKIRIFDGD-REIPPSQVNWRSDEATRYRFRQDPG 287

Query: 304 -KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
             +N+M   +I   + +  YMHDTP   +F +  RF +SGCVRV+N+ D   W+L+ TP 
Sbjct: 288 VDLNSMGFVRINIPNPHGVYMHDTPAKGIFGDDFRFVSSGCVRVQNVRDYVAWILQGTPQ 347

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            +   IE ++++ +    +    +PV++ YI+AWS  D ++QFRDDIY  D V
Sbjct: 348 GNPETIEAIIQSGQRVDARPVAPIPVYWTYITAWSTPDGLVQFRDDIYKRDGV 400


>gi|188580628|ref|YP_001924073.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179344126|gb|ACB79538.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 434

 Score =  309 bits (792), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 149/355 (41%), Positives = 228/355 (64%), Gaps = 4/355 (1%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGD 123
           S  PI+S +TIA TE  +  Y+ I+SRGGW  +     L +G+   +V  +R+RLI++GD
Sbjct: 54  SSTPILSPDTIAATEAMVEKYRAIVSRGGWQAVTGAAGLRVGSRGPAVAAVRQRLIVTGD 113

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           LD + G +  +D+YV + VK FQ RHGL  +G +  +T  AMNVP D+R+RQL+ N++R+
Sbjct: 114 LDATAGGAGVYDSYVAAGVKRFQARHGLSQTGQMSPATQAAMNVPADVRLRQLETNVIRL 173

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +      +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++   I FNP 
Sbjct: 174 RSY-SGDLGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNAKAVEINFNPT 232

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P SI++KD++  +++DP YL DN I ++   G+E+    V+WNS E   + +RQD G
Sbjct: 233 WTVPASIVRKDLIPKMQKDPNYLTDNKIRIL-SGGQEISPRSVNWNSDEGTRYTYRQDSG 291

Query: 304 K-INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
              N+M   +I   + +  +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP 
Sbjct: 292 ADFNSMGVVRINIPNPHGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLKDTPG 351

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           W R H+E+ V++ +    +L   VPV++ YI+AW+  D  +QFRDDIY  D V+V
Sbjct: 352 WDRAHVEQAVESGQRIDARLTQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNV 406


>gi|240137931|ref|YP_002962403.1| putative Peptidoglycan-binding protein [Methylobacterium extorquens
           AM1]
 gi|240007900|gb|ACS39126.1| putative Peptidoglycan-binding protein [Methylobacterium extorquens
           AM1]
          Length = 434

 Score =  305 bits (781), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 147/355 (41%), Positives = 226/355 (63%), Gaps = 4/355 (1%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGD 123
           S  PI+S +TIA TE     Y+ I+SRGGW  +     L +G+   +V  +R+RLI++GD
Sbjct: 54  SSTPILSPDTIAATESMAEKYRAIVSRGGWQNVSGAAGLRVGSRGPAVAAVRQRLIVTGD 113

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           LD + G +  +D+YV + VK FQ RHGL  +G +  +T  AMNVP ++R+RQL+ N++R+
Sbjct: 114 LDATAGGAGVYDSYVAAGVKRFQARHGLSQTGQMSPATQAAMNVPAEVRLRQLETNVIRL 173

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +      +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++  +I FNP 
Sbjct: 174 RSY-SGDLGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNTKATQINFNPT 232

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P SI++KD++  +++DP YL DN I ++   G+E+    V+WNS E   + +RQD G
Sbjct: 233 WTVPASIVRKDLIPKMQKDPNYLTDNKIRIL-SGGQEISPRSVNWNSDEGTRYTYRQDSG 291

Query: 304 K-INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
              N+M   +I   + +  +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP 
Sbjct: 292 ADFNSMGVVRINIPNAHGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLKDTPG 351

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           W R  +E+ V++ +     L   VPV++ YI+AW+  D  +QFRDDIY  D V+V
Sbjct: 352 WDRTRVEQAVESGQRIDATLTQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNV 406


>gi|163850806|ref|YP_001638849.1| peptidoglycan binding domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|218529626|ref|YP_002420442.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|254560490|ref|YP_003067585.1| peptidoglycan-binding protein [Methylobacterium extorquens DM4]
 gi|163662411|gb|ABY29778.1| Peptidoglycan-binding domain 1 protein [Methylobacterium extorquens
           PA1]
 gi|218521929|gb|ACK82514.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|254267768|emb|CAX23615.1| putative Peptidoglycan-binding protein [Methylobacterium extorquens
           DM4]
          Length = 434

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 147/355 (41%), Positives = 226/355 (63%), Gaps = 4/355 (1%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGD 123
           S  PI+S +TIA TE     Y+ I+SRGGW  +     L +G+   +V  +R+RLI++GD
Sbjct: 54  SSTPILSPDTIAATESMAEKYRAIVSRGGWQNVSGAAGLRVGSRGPAVAAVRQRLIVTGD 113

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           LD + G +  +D+YV + VK FQ RHGL  +G +  +T  AMNVP ++R+RQL+ N++R+
Sbjct: 114 LDATAGGAGVYDSYVAAGVKRFQARHGLSQTGQMSPATQAAMNVPAEVRLRQLETNVIRL 173

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +      +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++  +I FNP 
Sbjct: 174 RSY-SGDLGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNTKATQINFNPT 232

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P SI++KD++  +++DP YL DN I ++   G+E+    V+WNS E   + +RQD G
Sbjct: 233 WTVPASIVRKDLIPKMQKDPNYLTDNKIRIL-SGGQEISPRSVNWNSDEGTRYTYRQDSG 291

Query: 304 K-INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
              N+M   +I   + +  +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP 
Sbjct: 292 ADFNSMGVVRINIPNAHGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLKDTPG 351

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           W R  +E+ V++ +     L   VPV++ YI+AW+  D  +QFRDDIY  D V+V
Sbjct: 352 WDRTRVEQAVESGQRIDATLTQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNV 406


>gi|312114029|ref|YP_004011625.1| peptidoglycan-binding protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219158|gb|ADP70526.1| Peptidoglycan-binding domain 1 protein [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 428

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/382 (39%), Positives = 221/382 (57%), Gaps = 8/382 (2%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR 100
           ++S+   + DR   F    +   +   P ++KE IA T+ AI  Y +I++RGGWP+LP  
Sbjct: 45  DDSWEQPMRDR--AFQREWETQPERGFPTLAKENIATTKTAIKQYAEIVARGGWPQLPPI 102

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G S  +V +LR RL ++GDL    G    FD+YVE AVK  Q RHG+ P+G +D +
Sbjct: 103 ELRTGMSHPAVVQLRTRLQVTGDLQAYGGYPEVFDSYVEQAVKRAQERHGIPPTGFLDQT 162

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T+EA+NVP   R+RQL+ NL R++ L+      +YV+VNIPAA +EAV N +V  R   +
Sbjct: 163 TIEALNVPASARLRQLRTNLARLQSLVPGTPAGKYVIVNIPAAQIEAVNNNQVISRHAGV 222

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI-----HMID 275
           VG+ DR +P+L+S I  I FN  WV+P ++++ D++   R     L    I     H   
Sbjct: 223 VGKPDRPSPLLNSAIEEINFNKEWVVPPTVLKYDLVPKGRGGQDVLAKYKIDAYATHEDY 282

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           +KGK++   ++DW+S  P  + + Q PG  N +   KI F S    YMHDTP   +F   
Sbjct: 283 QKGKKLDASQIDWSSDAPLRYFYVQAPGDENPLGFAKINFASPQGVYMHDTPGQSVFQRS 342

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            R ++SGC+RV+NI  L  WLL+D   WS   +  + ++ +   V+L   VP+++ YI+A
Sbjct: 343 FRADSSGCIRVQNIHQLVAWLLEDN-GWSVQQVLRMKQSGERLFVRLKKRVPLYWTYITA 401

Query: 396 WSPKDSIIQFRDDIYGLDNVHV 417
           WS  D  +QFR DIY  D V  
Sbjct: 402 WSTPDGTVQFRRDIYRKDGVEA 423


>gi|27377895|ref|NP_769424.1| hypothetical protein bll2784 [Bradyrhizobium japonicum USDA 110]
 gi|27351041|dbj|BAC48049.1| bll2784 [Bradyrhizobium japonicum USDA 110]
          Length = 449

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 146/347 (42%), Positives = 205/347 (59%), Gaps = 3/347 (0%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDP 126
           P   + +  + + A   Y D+  RGGWP +P      LG    +   LR+RLI+SGDL  
Sbjct: 77  PTYDEGSAQRIKDAALSYSDLAVRGGWPTIPADAKFALGVQGANDDLLRKRLIVSGDLSA 136

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
            K  S AFD  +  AVK FQ RHGL P+GMV   TL AMNV V  RIRQL+ +L R++ +
Sbjct: 137 DKA-SGAFDQDLADAVKRFQARHGLAPTGMVTPRTLAAMNVSVQKRIRQLEASLQRLENM 195

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                G RYV+VNIPAA  EAVEN  V  R  VIVG+ ++ +P L ++I  ++ NP W +
Sbjct: 196 -NFGFGQRYVVVNIPAAFAEAVENDVVVRRYRVIVGKTEKPSPTLTAQITSVVLNPTWTV 254

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI + ++ A +R+DP YL   ++ ++D     +    VDW+    PNF  RQ  G  N
Sbjct: 255 PSSIAKTEISAHMRKDPTYLSRMHMEVLDAHDNPIDPHSVDWSGTHTPNFTVRQQNGTFN 314

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+ + KI+  +  + YMHDT +  LF++  RF++ GC RV N+ DL  WLLKD P WSR 
Sbjct: 315 ALGAVKIDMPNAYSVYMHDTNQRNLFSDDYRFDSHGCSRVDNVRDLAAWLLKDQPKWSRA 374

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I+  + T +   V +A +VPV + Y++AW  KD  +QFR+D+Y  D
Sbjct: 375 AIDAEIATGQHLDVAMAKKVPVAWTYLTAWMTKDQTVQFRNDVYNQD 421


>gi|300022478|ref|YP_003755089.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524299|gb|ADJ22768.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 423

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 140/359 (38%), Positives = 211/359 (58%), Gaps = 16/359 (4%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRP--------LHLGNSSVSVQRLRERLIIS 121
           +SK  IA T+ AI  Y +I+++GGWP+LP  P        L  G +  +V  LR+RL  S
Sbjct: 61  LSKANIAATKTAIQRYTNIVAQGGWPQLPEPPNKTPRDSLLQYGTTDAAVALLRQRLATS 120

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           GDL      S  FD+ V+ A+K FQ  +GL P+G+ D  T+ A+NVP D R++QL+ N+ 
Sbjct: 121 GDLTGGNISSTYFDSDVDKALKRFQASNGLTPTGIADKRTIVALNVPADARLKQLKANVS 180

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R+++    K G +YV+VNIPAA +EAV+NG++  R   +VG+ DR TP+LH+ I  + FN
Sbjct: 181 RLEEFTA-KAGKKYVVVNIPAAQVEAVQNGQIVARYAAVVGKADRPTPLLHTPITDLSFN 239

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM---ID--EKGKEVFVEEVDWNSPEPPNF 296
           P W +P ++I +D++   R+     K  N+ +   ID    GK+V   +++W++ +P  +
Sbjct: 240 PVWRLPPTVISEDLIPRGRE--MQSKGQNVLLKFHIDAYSNGKKVDPAKINWSTVKPGTY 297

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
            + Q PGK N +   KI F S ++ YMHDTP   +F    R  +SGC+RV NI +L  WL
Sbjct: 298 TYSQQPGKENPLGFLKINFDSAHSVYMHDTPSDRIFGRNYRSASSGCIRVHNIENLAAWL 357

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           L +   W    I  +    +   ++L   V + FVYISAW+  D I+QFR D+Y  D +
Sbjct: 358 LAEQRGWDSERIASMKANGERLDLRLKKPVQLLFVYISAWATPDGIVQFRRDLYQKDGI 416


>gi|254564132|ref|YP_003071227.1| peptidoglycan-binding protein [Methylobacterium extorquens DM4]
 gi|254271410|emb|CAX27423.1| putative peptidoglycan-binding protein (N-terminal domain)
           [Methylobacterium extorquens DM4]
          Length = 586

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 138/360 (38%), Positives = 197/360 (54%), Gaps = 19/360 (5%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPI----RPLHLGNSSVSVQRLRERLIISG 122
           +P  + +T   T +A   YQ     GGW  LP     +P   G+S  ++  LR  L ++G
Sbjct: 127 LPSYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKP---GDSHAAIPSLRHHLTLTG 183

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R
Sbjct: 184 DLPADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQR 243

Query: 183 IKKLLEQKMGL--RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
              L+    G   RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  
Sbjct: 244 ---LMGSSFGFGERYVTVNIPSATVEAVENGTVTRRYVAVVGSPDKQTPAVETRITDVNL 300

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQ
Sbjct: 301 NPTWTVPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQ 360

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           D G  N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T
Sbjct: 361 DSGLDNSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGT 420

Query: 361 -------PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                    W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 421 EGPNGPGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 480


>gi|163854165|ref|YP_001642208.1| peptidoglycan binding domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163665770|gb|ABY33137.1| Peptidoglycan-binding domain 1 protein [Methylobacterium extorquens
           PA1]
          Length = 590

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/360 (38%), Positives = 197/360 (54%), Gaps = 19/360 (5%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPI----RPLHLGNSSVSVQRLRERLIISG 122
           +P  + +T   T +A   YQ     GGW  LP     +P   G+S  ++  LR  L ++G
Sbjct: 131 LPSYTAQTFVDTMRAAERYQVYAEAGGWKPLPADFAPKP---GDSHAAIPSLRHHLTLTG 187

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R
Sbjct: 188 DLPADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQR 247

Query: 183 IKKLLEQKMGL--RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
              L+    G   RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  
Sbjct: 248 ---LMGSSFGFGERYVTVNIPSATVEAVENGAVTRRYVAVVGSPDKQTPAVETRITDVNL 304

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQ
Sbjct: 305 NPTWTVPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQ 364

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           D G  N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T
Sbjct: 365 DSGLDNSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGT 424

Query: 361 -------PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                    W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 425 EGPNGPGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 484


>gi|240141625|ref|YP_002966105.1| putative peptidoglycan-binding protein (N-terminal domain)
           [Methylobacterium extorquens AM1]
 gi|240011602|gb|ACS42828.1| putative peptidoglycan-binding protein (N-terminal domain)
           [Methylobacterium extorquens AM1]
          Length = 586

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/360 (38%), Positives = 197/360 (54%), Gaps = 19/360 (5%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPI----RPLHLGNSSVSVQRLRERLIISG 122
           +P  + +T   T +A   YQ     GGW  LP     +P   G+S  ++  LR  L ++G
Sbjct: 127 LPSYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKP---GDSHAAIPSLRHHLTLTG 183

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R
Sbjct: 184 DLPADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQR 243

Query: 183 IKKLLEQKMGL--RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
              L+    G   RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  
Sbjct: 244 ---LMGSNFGFGERYVTVNIPSATVEAVENGAVTRRYVAVVGSPDKQTPAVETRITDVNL 300

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQ
Sbjct: 301 NPTWTVPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQ 360

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           D G  N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T
Sbjct: 361 DSGLDNSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGT 420

Query: 361 -------PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                    W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 421 EGPNGPGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 480


>gi|154253343|ref|YP_001414167.1| peptidoglycan-binding domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157293|gb|ABS64510.1| Peptidoglycan-binding domain 1 protein [Parvibaculum
           lavamentivorans DS-1]
          Length = 399

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/355 (40%), Positives = 205/355 (57%), Gaps = 7/355 (1%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGD 123
           S  P++S ET+     AI  Y+ I + GGW  +     L LG     V ++RERL  +GD
Sbjct: 36  SSAPVLSAETLLPLTHAIETYRVIANLGGWGYVASGERLELGVRDPRVVQVRERLTATGD 95

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           L      +  +DA V  AV+ +Q+R+GL+P G+V   T+ AMNV V  RIRQL++NL R+
Sbjct: 96  LTVPAQDAELYDANVYEAVRRYQVRNGLEPDGIVGRRTIAAMNVRVQTRIRQLELNLRRL 155

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
              +   +  RYV VNI    +EAV NG V  R  VIVG+ DRQTP + S +N I FNPY
Sbjct: 156 SAAVP-ALPDRYVFVNIAGQEVEAVNNGIVEFREPVIVGKQDRQTPEITSEVNSITFNPY 214

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPE-PPNFIFR 299
           W +P+SI   DM+  +R +P YL+   I ++   D   +E+    +DW++P     + FR
Sbjct: 215 WYVPKSIAMADMLPKIRANPDYLQRQGIRVLQGWDTNIRELNPRNIDWSNPRINEAYYFR 274

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK- 358
           QDPG  N++ S KI F +    ++HDTP   LF    R  +SGCVRV+N+  L  WL++ 
Sbjct: 275 QDPGPGNSLGSLKINFPNNQAIFLHDTPTKTLFGRQERNFSSGCVRVQNVRGLVSWLMQG 334

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           D+  W    +   V +R+   V LAT VP++ +Y++AW   + I+ FRDD+Y  D
Sbjct: 335 DSSEWDAARVARSVDSRQYRNVSLATPVPIYLMYLTAWVTPEGIVNFRDDVYDRD 389


>gi|188584494|ref|YP_001927939.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179347992|gb|ACB83404.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 602

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 138/360 (38%), Positives = 198/360 (55%), Gaps = 19/360 (5%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPI----RPLHLGNSSVSVQRLRERLIISG 122
           +P  + +T   T +A   YQ     GGW  LP     +P   G+S  ++  LR  L ++G
Sbjct: 128 LPTYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKP---GDSHPAIPSLRHHLTLTG 184

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  +D  + +AVK FQ RHGL  +G++   TL A+NVP D R RQL+ +  R
Sbjct: 185 DLPADAPPSDRYDPPLVAAVKAFQARHGLPDAGILGRLTLNALNVPADTRQRQLRASAQR 244

Query: 183 IKKLLEQKMGL--RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
              L+    G   RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  
Sbjct: 245 ---LMGSNFGFGERYVTVNIPSATVEAVENGTVTRRYVAVVGSPDKQTPAVETRITDVNL 301

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQ
Sbjct: 302 NPTWTVPVSVIRNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPTTIDWNTQKAVNYTLRQ 361

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           D G  N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T
Sbjct: 362 DSGLDNSLGQIRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGT 421

Query: 361 -------PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                   TW    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 422 EGPNGAGSTWGPIEIETAIAAGERRDVKLVKPTPVAFVYLTGYATSDGRVHFRDDIYGLD 481


>gi|218533110|ref|YP_002423926.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218525413|gb|ACK85998.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 586

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 137/358 (38%), Positives = 196/358 (54%), Gaps = 15/358 (4%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPI----RPLHLGNSSVSVQRLRERLIISG 122
           +P  + +T   T +A   YQ     GGW  LP     +P   G+S  ++  LR  L ++G
Sbjct: 127 LPSYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKP---GDSHAAIPSLRHHLTLTG 183

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R
Sbjct: 184 DLPADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQR 243

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           +        G RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  NP
Sbjct: 244 LMGS-SFCFGERYVTVNIPSATVEAVENGAVTRRYVAVVGSPDKQTPAVETRITDVNLNP 302

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQD 
Sbjct: 303 TWTVPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQDS 362

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-- 360
           G  N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T  
Sbjct: 363 GLDNSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGTEG 422

Query: 361 -----PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                  W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 423 PNGPGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 480


>gi|220924541|ref|YP_002499843.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219949148|gb|ACL59540.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 540

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/358 (37%), Positives = 202/358 (56%), Gaps = 13/358 (3%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD 125
            P ++  T   T +    YQ I+  GGWP +P    L  G+ + +V  LR RL ++ DL 
Sbjct: 122 TPTLAPSTFLDTLRMADRYQAIVQAGGWPGVPANLSLKPGDRNPAVALLRRRLAVTEDLA 181

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                S   D  + +A+K FQ RHGL  +G++   T++A+NVP   R RQL  +  R   
Sbjct: 182 ADAPASDVMDEALVAALKRFQQRHGLPDTGLLGPMTVKALNVPASTRQRQLAASASR--- 238

Query: 186 LLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           L+  +   G RYV+ NIP+A++EAVE G V  R   +VG+ DR +P++ +RI  + FNP 
Sbjct: 239 LMGSRFPFGERYVVANIPSATVEAVERGTVARRYVAVVGKPDRASPLVETRITNVNFNPT 298

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P S+I+KD++  +R+DP YL   +I M+D +G EV    +DW++ +  N+  RQDPG
Sbjct: 299 WTVPVSLIKKDIIPHMRKDPGYLAKMHIRMLDGQGNEVQPTAIDWSTEKAVNYTLRQDPG 358

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK----- 358
             N++   +I+  +R+  YMHDTP   LF+   RF +SGCVRV  +  L  WLL+     
Sbjct: 359 FDNSLGQVRIDMPNRHAVYMHDTPSKNLFSRTARFHSSGCVRVAEVKGLVGWLLEGTPGP 418

Query: 359 --DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 W    IE  + T +   +KLA  VPV FVY++ ++  D    FRDD+Y LD 
Sbjct: 419 GGPGTVWGPMEIETGIATGERRDIKLAKPVPVTFVYLTGYATPDGRAHFRDDVYSLDG 476


>gi|296446244|ref|ZP_06888191.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296256281|gb|EFH03361.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 476

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 130/357 (36%), Positives = 199/357 (55%), Gaps = 7/357 (1%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGD 123
           D   P +  ET   T  A   Y  I   GGWP++    L  G+S  +V  LR+RL + GD
Sbjct: 115 DDPTPALQPETFFTTSLASERYAAIADAGGWPKVGA-ALKPGSSGRAVAALRKRLAVEGD 173

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           L  +      +D  +  AVK FQ R GL  +G+V  +TL  ++VP ++R RQL  +  R+
Sbjct: 174 LPSAAAAGEGWDGALTQAVKHFQFRMGLKQTGVVAGATLRELDVPANVRFRQLASSAQRL 233

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
                   G RY++VNIP+A+++AVENG+V  R T IVG VD  +P + +R+  +  NP 
Sbjct: 234 AGN-NFPFGPRYIVVNIPSAAVDAVENGRVVRRYTAIVGGVDHPSPEVEARVGAVNLNPT 292

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P SII+ ++M  ++++P YL    I ++D  G EV  + ++W +    N+  RQD G
Sbjct: 293 WTVPVSIIKNEIMPKMQKNPSYLAKLRIRVLDNHGAEVDPKTINWANERAANYTLRQDSG 352

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK---DT 360
             N++ S +I   +++  YMHDTP   LF +  RF + GCVRV  + DL  WLL+    +
Sbjct: 353 AGNSLGSIRIAMPNKHAVYMHDTPSKRLFASDYRFLSHGCVRVEGVYDLAAWLLQGASGS 412

Query: 361 PT--WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           P+  W +  I   +   +   V L   VPV +VY++ W+  D  + FR+D+YG+D V
Sbjct: 413 PSGQWDKAAILAKIAGGERQDVALPKPVPVVWVYMTGWASADGTVHFRNDVYGVDAV 469


>gi|170742780|ref|YP_001771435.1| peptidoglycan binding domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168197054|gb|ACA19001.1| Peptidoglycan-binding domain 1 protein [Methylobacterium sp. 4-46]
          Length = 545

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 139/358 (38%), Positives = 202/358 (56%), Gaps = 13/358 (3%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDP 126
           P ++  T   T +    YQ I+  GGWP +P    L  G+    V  LR RL  + DL  
Sbjct: 128 PTLTPATFLDTLRMADRYQAIVQAGGWPSVPASLSLKPGDRHPGVLALRRRLAATEDLPA 187

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
              +S   D  + +AV  FQ RHGL  +G+V + T++A+NVP  +R RQL  +  R   L
Sbjct: 188 DAPVSDRMDEALVAAVTRFQHRHGLPETGLVGAMTVKALNVPASVRQRQLAASAAR---L 244

Query: 187 LEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +  +   G RYV+ NIPAA++EAVE G V  R   +VG+ DR +P++ +RI  + FNP W
Sbjct: 245 MGSRFPFGERYVVANIPAAAVEAVERGAVVRRYVAVVGKPDRASPMVETRITNVNFNPTW 304

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P S+I+KD++  +R+DP YL   +I M+D +G EV    +DW++ +  N+  RQDPG 
Sbjct: 305 TVPVSLIKKDIIPHMRKDPGYLAKMHIRMLDGQGNEVQPTAIDWSTEKAVNYTVRQDPGF 364

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N++   +I+  +R+  YMHDTP   LF   +RF +SGCVRV  +  L  WLL+ TP   
Sbjct: 365 DNSLGQVRIDMPNRHAVYMHDTPSKSLFTRTIRFHSSGCVRVAEVKGLVAWLLEGTPGPG 424

Query: 365 RY-------HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
                     IE  + T +   +KLA  VPV FVY++ ++  D    FRDD+Y LD  
Sbjct: 425 GPGTVWGPIEIETGIATGERRDIKLAKPVPVTFVYLTGYATPDGRAHFRDDVYNLDGA 482


>gi|300022492|ref|YP_003755103.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524313|gb|ADJ22782.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 452

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/363 (38%), Positives = 205/363 (56%), Gaps = 10/363 (2%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERL 118
           D+  DS  P  S   I     AI  YQ I+  GGWP +P  R +  G     V  LR+RL
Sbjct: 69  DLRPDS-TPWRSDAMINAISAAIERYQSIVDSGGWPVVPTGRMMRSGEDDPRVPILRKRL 127

Query: 119 IISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
            ISGD+ P+KG    S  FD+ +E  VK FQ RHG+  +G ++ S    +N     R+ Q
Sbjct: 128 RISGDM-PAKGSYYDSETFDSELEEGVKRFQRRHGIRITGRIEQSVYPVLNTTAAERLAQ 186

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L++NL R++ L+   +  RYVLVN+PA  LEAV+  +V LR  VIVGR  RQTP + + I
Sbjct: 187 LKLNLQRVQALM-HGIEDRYVLVNVPAFQLEAVDKYEVQLRHRVIVGRPQRQTPDVRAMI 245

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEEVDWNSPEPP 294
             + F PYW +P S+   D++  L+Q+P YL D  I + +   G E+    VDW++P+  
Sbjct: 246 KALNFFPYWRVPDSVATLDLVPRLKQEPGYLADEGIRVYNGVNGPELNPATVDWSAPQVA 305

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
           ++ F+QDPG  NA+   +I+  +    YMHDTP   LF    R  ++GCVRV+N+ DL  
Sbjct: 306 SYKFKQDPGDKNALGLLRIDMSNEFGVYMHDTPMKNLFGQQSRPFSAGCVRVQNVFDLGD 365

Query: 355 WLLKDTPTWSR-YHIEEVVKTRKTTPVKLATEVPVHFVYISAWS-PKDSIIQFRDDIYGL 412
           W+  + P W +   + + +   +   +KL   +PV+F Y +AW+ P +  ++FR DIYG 
Sbjct: 366 WIAHNEPGWEQPGRVRDTLAAGQPMELKLMHPIPVYFAYFTAWAEPSNGRVEFRPDIYGR 425

Query: 413 DNV 415
           D  
Sbjct: 426 DGA 428


>gi|170750306|ref|YP_001756566.1| peptidoglycan binding domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656828|gb|ACB25883.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 595

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 135/370 (36%), Positives = 196/370 (52%), Gaps = 20/370 (5%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELP--IRPLHLGNSSVSVQRLRERLIISGDLD 125
           P ++  T   T +A   Y      GGW  LP  +  L  G    ++  LR  L ++GDL 
Sbjct: 159 PTLTSRTFLDTLRAAERYAAFAEAGGWERLPEDLARLKPGERHPAIPALRHHLTLTGDLP 218

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                +   D  + +A+  FQ RHGL  SG++   T+ A+NVP  +R RQL  +  R   
Sbjct: 219 ADAPPNDRLDPPLVAAIAAFQARHGLPDSGVLGRLTINALNVPAAVRQRQLAASAAR--- 275

Query: 186 LLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           L+  K   G RYV+VNIP+A++EAVENG V  R   +VG  D+ TP + +RI  I FNP 
Sbjct: 276 LMGSKFPFGERYVVVNIPSAAVEAVENGAVARRYVAVVGSPDKATPPVETRITDINFNPT 335

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P S+++ +++  +R++P YL  N+I ++   G EV    +DW   +  N+  RQDPG
Sbjct: 336 WTVPASVVKNEIIPQMRRNPGYLAKNHIRILSPSG-EVDPTRIDWAGEKAVNYTLRQDPG 394

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT--- 360
             N++   +I+  +R   YMHDTP   LF   VRF + GCVRV  + +L  WLL+ T   
Sbjct: 395 FDNSLGQVRIDMPNRFAVYMHDTPAKSLFAASVRFHSHGCVRVGQVKELVGWLLQGTDGP 454

Query: 361 ----PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-- 414
                +W    IE  +   +   +KLA  +PV FVY++ ++  D    FRDDIY LD   
Sbjct: 455 NGPGTSWGPIEIETGIADGERRDIKLAKPIPVTFVYLTGYATPDGKAHFRDDIYNLDTPA 514

Query: 415 ---VHVGIIP 421
                 G IP
Sbjct: 515 AEPAATGTIP 524


>gi|323138298|ref|ZP_08073369.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322396381|gb|EFX98911.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 387

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 126/356 (35%), Positives = 202/356 (56%), Gaps = 9/356 (2%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGD 123
           D   P++  ET   T KA   Y  I+  GGWP++ +  L  G+   +V  LR RL    D
Sbjct: 32  DDPAPVLQPETFFTTSKASERYAQIVDLGGWPKVGVS-LRPGSKGPAVSTLRRRLAAEDD 90

Query: 124 L--DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
              D +K    ++D  +  AVK FQ R GL  +G+V  +TL A++VP  +R RQL  +  
Sbjct: 91  AVTDTNK---QSWDPALTEAVKRFQFRMGLKQTGVVAGATLRALDVPATVRFRQLASSAQ 147

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R+  + +   G RY++VNIP+ +++AV+N +V  R   IVG  +  +P + +++  +  N
Sbjct: 148 RLAGV-DFPFGPRYIVVNIPSTAVDAVDNDRVVRRYAAIVGDPEHHSPEVQAKVVAVNIN 206

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W +P SII+ ++   + +DP YL  + I +++ +G+EV    ++W S    N+  RQD
Sbjct: 207 PTWTVPTSIIKNEIAPKMLKDPSYLTRSRIRVLNGRGEEVDPRSINWASERAVNYTLRQD 266

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL--KD 359
            G  N++ S +I   + ++ YMHDTP   LF +  RF + GCVRV+ ++DL  WLL   +
Sbjct: 267 SGAHNSLGSIRISMPNPHSVYMHDTPSRNLFASDYRFLSHGCVRVQGVVDLAAWLLDGSN 326

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            P  S+  I   + + +   V+L+  VPV +VY++ W+  D I+ FRDD+Y LD V
Sbjct: 327 GPQLSKEQINAKIASGEREEVRLSHPVPVVWVYMTGWASADGIVHFRDDVYHLDEV 382


>gi|297568521|ref|YP_003689865.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924436|gb|ADH85246.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 557

 Score =  219 bits (558), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/352 (37%), Positives = 192/352 (54%), Gaps = 11/352 (3%)

Query: 82  IAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           +A Y+ +  +GGWP++P    L LG+    V  LR+RL  S DL  +      FD  +E+
Sbjct: 200 LADYRRLAEQGGWPQVPGSTTLRLGDRDHRVVTLRQRLHRSRDLSGTAARGDVFDETLEA 259

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AV+ FQ RHGL   G+V   TL A+NVP+++RIRQL++NL R + L E+  G R++LVN 
Sbjct: 260 AVRSFQQRHGLLADGVVGRQTLAALNVPLEVRIRQLKLNLERWRWLAEE-FGRRHILVNT 318

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
            A  LE +E+ +  L   V+ G   R+TP    R+  ++ NPYW IP SI  +D++  L+
Sbjct: 319 AANKLELIEDEQAILSMRVVTGTPYRRTPNFSDRVTYLVLNPYWNIPASIAAQDILPELQ 378

Query: 261 QDPQYLKDNNIHMID---EKGKEVFVEEVDW----NSPEPPNFIFRQDPGKINAMASTKI 313
           ++P YL  N I ++D        V  + VDW      P+   +  RQDPG  N +   K 
Sbjct: 379 ENPDYLAQNGIKVLDGWNADSATVTPDTVDWERLRTRPQAFPYRLRQDPGPRNPLGRIKF 438

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV- 372
            F +  + Y+HDTP   LF+   R  +SGC+R+   ++L   LL  TP  S   +   + 
Sbjct: 439 MFPNAYSVYLHDTPARELFHRQTRNFSSGCIRLERPLELAANLLAGTPLDSVGALRRALF 498

Query: 373 -KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
            +T     V+L + VPVH VY +AW   D  +QFRDDIY  D +    +  P
Sbjct: 499 DETSHDRHVRLPSPVPVHLVYWTAWVAPDGSVQFRDDIYERDGLLAQALTTP 550


>gi|85857899|ref|YP_460101.1| cell wall degradation protein [Syntrophus aciditrophicus SB]
 gi|85720990|gb|ABC75933.1| cell wall degradation protein [Syntrophus aciditrophicus SB]
          Length = 625

 Score =  219 bits (558), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 129/343 (37%), Positives = 195/343 (56%), Gaps = 8/343 (2%)

Query: 85  YQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAV 142
           Y DI   GGW ++P  RPL  G     V+ LR+RLI +G    S+  +   FD  +E+AV
Sbjct: 268 YIDIAEAGGWRKIPAGRPLMKGMRDKRVRTLRKRLISTGMASLSQAKTDTYFDLDLETAV 327

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           + FQ +HGL   G+V  +TL  +NVPV++RI Q+ VNL R++  L  ++G R++L+NIP 
Sbjct: 328 RRFQRQHGLREDGIVGRTTLVELNVPVEVRICQMAVNLDRLR-WLPYELGDRHILINIPD 386

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            +LE VE+ +V +    IVG+ D++T +L SRI  I  NPYW IP+SI  ++ +  L+++
Sbjct: 387 FNLEIVEDKRVVMHIRAIVGKTDKRTNLLSSRITAIELNPYWKIPKSIAVEEFLPQLKRN 446

Query: 263 PQYL-KDNNIHMIDEKGKEVFVEEVDWNSPEPPNF--IFRQDPGKINAMASTKIEFYSRN 319
           P+YL K   +   D +   V    + W+     NF    RQ+PG  N +   K  F +  
Sbjct: 447 PRYLGKKIKVFAGDYQTNPVSPTSIKWSRVTAENFPYFLRQEPGSDNPLGRVKFVFSNEA 506

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT--WSRYHIEEVVKTRKT 377
           + Y+HDTP   LF    R  + GCVR+   +DL  +LLK  P   WS  +I+  ++  K 
Sbjct: 507 DIYIHDTPTRNLFTQDKRSFSHGCVRIEKPVDLAAYLLKIQPNNRWSSQNIQAEIRKGKN 566

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            P+ L   VPVH VY + W  ++  + FR DIY +DN+   ++
Sbjct: 567 LPLPLNERVPVHIVYQTVWIDREGNLNFRPDIYDIDNIPANLL 609


>gi|114319260|ref|YP_740943.1| peptidoglycan binding domain-containing protein [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114225654|gb|ABI55453.1| Peptidoglycan-binding domain 1 protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 559

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 194/350 (55%), Gaps = 8/350 (2%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGL 130
           ++   Q  +A+A +Q +  +G +P +   PL  +G+    V+ LRE+L + GDL+    L
Sbjct: 185 QDNYHQMRRALARFQALAEQGDYPRMEAGPLLRVGDRDPRVETLREQLRLLGDLEDDAPL 244

Query: 131 S-VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           S   +   +E+AV+ FQ RHGL   G+V   T+ A+N P   R  QL+VNL R++  + +
Sbjct: 245 SETLYGEALEAAVRDFQRRHGLQVDGVVGPRTVAALNTPPADRAEQLRVNLERLR-WMPR 303

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +G RY+LVNI   S+     G+  +R  V+VGR  R+TP+    +  ++ NP W +P  
Sbjct: 304 DLGDRYILVNIAGFSMTVHAEGETVMRQRVVVGRDYRRTPVFTGNMTYLVLNPSWEVPHR 363

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR--QDPGK 304
           +  +D++ L+++DP+YL+     ++   G   +E+  E +DW+      F +R  Q PG 
Sbjct: 364 LATRDVLPLIQRDPEYLERMGFRVLQGWGADEREIDPESLDWDRYSHRYFPYRLRQLPGP 423

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NAM   K  F +R+N Y+HDTP   LF    R  +SGC+RV   ++L  WLL+D   WS
Sbjct: 424 QNAMGRVKFMFPNRHNVYLHDTPSRELFQQPRRAFSSGCIRVERPLELAAWLLRDQRQWS 483

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              I++ ++ R+   V L   +PVH  Y +AW   +  + FRDD+Y  D 
Sbjct: 484 PEAIDKALEERRERTVPLRRGIPVHLQYWTAWVDAEGTLHFRDDLYDRDT 533


>gi|78186201|ref|YP_374244.1| hypothetical protein Plut_0313 [Chlorobium luteolum DSM 273]
 gi|78166103|gb|ABB23201.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
          Length = 546

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/353 (36%), Positives = 193/353 (54%), Gaps = 7/353 (1%)

Query: 79  EKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS--KGLSVAFD 135
            +A+A Y+ I + GGWP LP  P L  G  S  V  LR RL I GDL+ +  +  S  FD
Sbjct: 188 RRALARYRAIAASGGWPVLPPGPALTPGMQSSRVPALRRRLAIVGDLESTLIRDSSTVFD 247

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +  AV+ FQ RHG+   G+    T  AMNVP  +R+  L+VNL R +  L   +   Y
Sbjct: 248 PELSLAVRRFQERHGITVDGVPGLETRSAMNVPASVRVECLKVNLERYRWFLSD-LDSTY 306

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           VLVNI   SL+ VE+G+    + VIVGR  R+TP+  + +  ++FNP WV+P +I+++D 
Sbjct: 307 VLVNIAGFSLQYVEDGEFRWATRVIVGRPYRKTPVFKADMKAVVFNPRWVVPPTILKQDA 366

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKI 313
           +  +R+DP +L+ N+I +ID  G+ V    VDW++     F +R  Q  G   A+   K 
Sbjct: 367 LPAIRKDPGWLRANHISVIDRNGRTVDPISVDWSARSAATFPYRLQQAAGDDGALGRLKF 426

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              +    Y+HDTP+  LF    R  +SGC+RV N   L   +L D+  WS   I+  + 
Sbjct: 427 LLPNPYLVYLHDTPKRELFLQSARTFSSGCIRVENPRRLAQLVLADSVRWSPEQIDAQID 486

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
           T +T  + L   VPV  +Y++A +  + ++ FR+D+Y  D   +  +  P  H
Sbjct: 487 TGRTRTISLPKPVPVLILYLAAMAEGERVL-FRNDVYRRDTAVLQALQAPLPH 538


>gi|163759199|ref|ZP_02166285.1| hypothetical protein HPDFL43_05525 [Hoeflea phototrophica DFL-43]
 gi|162283603|gb|EDQ33888.1| hypothetical protein HPDFL43_05525 [Hoeflea phototrophica DFL-43]
          Length = 250

 Score =  207 bits (527), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 108/224 (48%), Positives = 153/224 (68%), Gaps = 2/224 (0%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG 93
           S ++ IIN       +D+FD   +R      +  PI S +TI   E+A+  YQDI++RGG
Sbjct: 27  STIEAIINSPRRGSWDDQFDAKSSRSVAKTATRYPISSADTIGFVERAVFDYQDIIARGG 86

Query: 94  WPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP +P  + L +G S   V+ LR+RLI SGDL  + GLS AFD+YV+ AVK FQ RHGL 
Sbjct: 87  WPFVPATKKLRMGVSEPEVRLLRQRLIASGDLSANTGLSNAFDSYVDGAVKKFQARHGLP 146

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           P G++ + + +A+NV  D+R+ QL+ NL+R++ +    +G RYV+VNIPAA +EAVENG+
Sbjct: 147 PDGILGNYSYQALNVSADVRLGQLETNLVRLRSM-SGFLGDRYVMVNIPAAQIEAVENGR 205

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           V LR T IVG++DRQTPIL+S+I+ I+ NPYW  PR   +KD++
Sbjct: 206 VVLRHTAIVGKIDRQTPILNSKIHEIILNPYWTSPRLDHRKDIV 249


>gi|312144057|ref|YP_003995503.1| ErfK/YbiS/YcfS/YnhG family protein [Halanaerobium sp.
           'sapolanicus']
 gi|311904708|gb|ADQ15149.1| ErfK/YbiS/YcfS/YnhG family protein [Halanaerobium sp.
           'sapolanicus']
          Length = 545

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/339 (33%), Positives = 179/339 (52%), Gaps = 9/339 (2%)

Query: 85  YQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAV 142
           Y+D      WPE+    L   G   + V +L + LI  G L          F + + +AV
Sbjct: 200 YRDSGEVEQWPEVDSGSLLAQGAEGIRVSQLSDNLINRGYLSEENIDDKYYFGSQLNAAV 259

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           K FQ  HGL   G+V   TLEA+N+P + RI+Q+ +N+ R +  L + +G RY+ VNI  
Sbjct: 260 KEFQFNHGLSDDGIVGPQTLEALNIPYEKRIKQIMINMERWR-WLPKDLGERYIYVNISD 318

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            SL   E+  + +    IVG   R TP+    I  ++FNPYW +P+SI  +D++  ++ D
Sbjct: 319 YSLNVYEDNNIIMNMKTIVGNEQRSTPVFSDEIRYLVFNPYWYVPKSIAVEDILPSVKND 378

Query: 263 PQYLKDNNIHMI----DEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFY 316
             YL +NN  +     +   +++   E++W + +  NF F  RQ+PG  NA+   K  F 
Sbjct: 379 IDYLDENNYKIFAYNNNNTLRKIDASEIEWENIDEDNFNFLVRQEPGDENALGRVKFMFP 438

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +R N Y+HDTP   LF+   R  +SGC+R+   I+L ++LLKD   W R  +EE++K   
Sbjct: 439 NRFNVYLHDTPSKYLFDETERGFSSGCIRIEKPIELALYLLKDQEEWDRETLEEIMKEDN 498

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              + L   +P++  Y +AW      + FR DIY  D +
Sbjct: 499 EKTIYLDETIPIYLQYNTAWVDNFGNLNFRKDIYNRDKI 537


>gi|144899601|emb|CAM76465.1| protein conserved in bacteria [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 532

 Score =  206 bits (523), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 187/341 (54%), Gaps = 15/341 (4%)

Query: 81  AIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           A+A Y+ + + GGW  +P  P +  G     +  +R+RLI++G+L  ++      DA + 
Sbjct: 176 ALARYEKLAADGGWSVIPDGPSIKAGMEDARLPLVRKRLIVTGELATNQSQGNTLDAPLI 235

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            AVK FQ RHG+DP G +   TL A+N+  + R+RQ+  NL R +  + +++   ++ VN
Sbjct: 236 EAVKRFQGRHGIDPDGAIGKQTLTALNISAEERVRQVAANLERWR-WMPRRLDSTHIAVN 294

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           +PAA  E V  G++ +   V+VG +  QTP + + +  ++ NP W +P SI  K+++  L
Sbjct: 295 LPAAHFELVREGRIDMAMRVVVGDIQHQTPTMATTMTSVVINPTWTVPPSIATKEILPKL 354

Query: 260 RQDPQYLKDNNIHMID------EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           R+DP YL +NN+ ++D      EK + +    +DW+      +  RQ PG  NA+   K 
Sbjct: 355 RKDPGYLANNNMRILDAFDGDFEKSQGL---GIDWSKYSKFPYRLRQKPGSDNALGQVKF 411

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              + ++ Y+HDTP+   F  + R  + GCVR+    DL   LL          ++E V 
Sbjct: 412 NLDNGDDIYLHDTPKRQYFGRIFRALSHGCVRLERPTDLAKLLLPAQAD----KLDEWVL 467

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              T  VKL   + V+ +Y++AWS +D  + FR+D+YG D+
Sbjct: 468 DDTTRTVKLDKPLTVYLMYMTAWSDEDGTVHFREDLYGHDS 508


>gi|330830685|ref|YP_004393637.1| cell wall degradation protein [Aeromonas veronii B565]
 gi|328805821|gb|AEB51020.1| Cell wall degradation protein [Aeromonas veronii B565]
          Length = 494

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/327 (38%), Positives = 169/327 (51%), Gaps = 11/327 (3%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L +  L  G SS  + ++R  L   GD  PS G  + +D   E A+K FQ RHGL  
Sbjct: 167 WPTLDMPTLRAGESSAELGQIRAMLNELGDSAPSHGDQI-YDGDTEQAIKQFQRRHGLTA 225

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++   T   +N    +R   L  NL R + L++Q  G RYVLVNIP   L  VE+G  
Sbjct: 226 DGIIGRQTRSWLNTGPQVRASLLLRNLWR-RDLVDQLAGGRYVLVNIPDYRLSVVESGNE 284

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
              S VIVG+  R TPIL S I  I+ NP W +PRSI+ KD++  L +DP YL      +
Sbjct: 285 VFTSRVIVGKEQRATPILASEIRSIVLNPSWHVPRSILSKDILPKLGRDPAYLSREQFEV 344

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
           ID +G  V   E  W+      F +  RQ PG  NA+   K    + +  Y+H TP   L
Sbjct: 345 IDSEGNPVQFTEEGWHQALAAGFPYRLRQKPGDHNALGRYKFYLPNNDAIYLHSTPRKAL 404

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH---IEEVVKTRKTTPVKLATEVPV 388
           F    R  +SGC+RV +  DL   LL D    SRY    +  ++K  +T  + L T +PV
Sbjct: 405 FEQGARAFSSGCIRVEHADDLAELLLAD----SRYQPDKVANILKESQTKWLPLTTPIPV 460

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNV 415
             VY S+W  ++   Q R+DIYG D V
Sbjct: 461 FTVYWSSWIDENGRQQLRNDIYGFDRV 487


>gi|311695538|gb|ADP98411.1| peptidoglycan-binding domain 1 protein [marine bacterium HP15]
          Length = 550

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/349 (38%), Positives = 187/349 (53%), Gaps = 20/349 (5%)

Query: 80  KAIAFYQDILSRGGWPELP------IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL--- 130
           K +A  QD+    G P LP      IRP   G+    +  +R RL + G+L  S      
Sbjct: 176 KLMAARQDLTRLLGQPWLPLALSPTIRP---GDRDERLNEVRRRLSLLGELAESPATFSD 232

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV-PVDLRIRQLQVNLMRIKKLLEQ 189
              +DA +ESAV  FQ RHGL+  G++   TL A+NV PV+ R+R +   L R + L E 
Sbjct: 233 PRDYDAELESAVMRFQARHGLEADGLIGKDTLTALNVIPVE-RLRHIDATLERWRWLPE- 290

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +G  YVLVNI    L+ VENG   LR  VIVG+  RQTP+   RI  ++FNP W +PR+
Sbjct: 291 SLGDTYVLVNIAGFELKMVENGAEVLRKRVIVGQPFRQTPVFSDRIRYLVFNPTWTVPRT 350

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIFR--QDPGK 304
           ++ +D +  + +DP YL   NI +    G +   V   EVDW S    NF ++  Q+PG 
Sbjct: 351 LMIQDQLPRILRDPNYLSRLNISVYRGWGADRERVDPLEVDWPSLNRNNFPYQLVQEPGP 410

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   K  F ++ + Y+HDTP   LF+   R  +SGC+RV    DL   LL   P WS
Sbjct: 411 QNALGQIKFMFPNQYDVYLHDTPGRGLFSRAERSFSSGCIRVEQPFDLAERLLASAPDWS 470

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           R  I+ VV   +   V L   VPVH  Y ++W   +  +QFR+D+Y  D
Sbjct: 471 REKIDRVVSEAQPQTVVLPEPVPVHIQYWTSWVDNEGRLQFRNDLYNRD 519


>gi|110596970|ref|ZP_01385260.1| Peptidoglycan-binding domain 1 [Chlorobium ferrooxidans DSM 13031]
 gi|110341657|gb|EAT60117.1| Peptidoglycan-binding domain 1 [Chlorobium ferrooxidans DSM 13031]
          Length = 560

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 190/343 (55%), Gaps = 6/343 (1%)

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-SKGLSVAF 134
           Q  K +   + +   GGWP +P +  L  G +   V  LR+RL++SGD+   +   S  +
Sbjct: 208 QLRKGLIRDRALAKEGGWPVVPDLTGLKEGATDNRVLPLRKRLVVSGDMTAVANDTSRIY 267

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +  AVK FQ R+G+   G+   +T  AMN+PV+ RI Q+++NL R +  +   +   
Sbjct: 268 DRRMVEAVKRFQKRNGMVADGVPGPATFRAMNLPVERRIEQIRINLERCRWFMND-LEPT 326

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           YVLVNI   SL  VE+G+    + VIVG+  R+TP+  + +  I+FNP WV+P +I+ KD
Sbjct: 327 YVLVNIAEFSLRYVEHGRNRWGTRVIVGQPYRETPVFKADMQYIIFNPRWVVPPTILAKD 386

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTK 312
           ++  +R++  YL    ++++D  G  V    V+W+     NF +R  Q  G   A+   K
Sbjct: 387 VLPAIRKNSSYLSRKKLNILDRNGTVVNPASVNWSQYTGANFPYRLQQTAGDHGALGRIK 446

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
               +R+  Y+HDTP   LF    R  +SGC+RV N  +L   +L+D+  WSR  I+  +
Sbjct: 447 FMLPNRHTVYLHDTPTKDLFEKSSRTFSSGCIRVENPQELARLVLQDSLKWSRERIQAAI 506

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            T KT  V L   +PV  +Y++A++  D I+ F DD+Y  D+ 
Sbjct: 507 NTGKTATVYLPKRIPVFILYLTAFAEGDEIV-FLDDVYNRDSA 548


>gi|304393082|ref|ZP_07375011.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303294847|gb|EFL89218.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 492

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/344 (38%), Positives = 178/344 (51%), Gaps = 19/344 (5%)

Query: 81  AIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
            I FY  I   GGWP++P    L +G     V  LR+RL I+GD       S  FDA ++
Sbjct: 56  GITFYTQIAQSGGWPQVPEGGTLSVGVDDPRVPILRQRLYITGDYLGEDTQSTMFDAALK 115

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            AV  FQ R+G +P G V  +TL +MNVPV+ R+ QL++N  R    +   +G R+VLVN
Sbjct: 116 EAVVAFQNRNGQEPDGAVGPATLASMNVPVEKRLEQLRINQRRWDN-MPASLGDRFVLVN 174

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           +    LE +E  K  L   V+VG+    TP     I  I  NPYW +P SI  K+    L
Sbjct: 175 MAGFELEVIEGEKTVLDMKVVVGKDYHSTPEFSDLIKTIEINPYWNVPASIANKE----L 230

Query: 260 RQDPQYLKD-NNIHMIDEKGKEVF-------VEEVDWNSPEPPNFIF--RQDPGKINAMA 309
           + D  Y+K    +   D +G EV        V ++ W   +  N  F  RQ PG  NA+ 
Sbjct: 231 KLD--YMKGAATLAKADSQGYEVVNGDQVVPVSQIAWTKYKDDNLPFRIRQRPGPSNALG 288

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +++N Y+HDT    LF+  VR  + GCVR+    +L  +LL     W R  I+
Sbjct: 289 DMKFLFPNKHNVYLHDTQAKSLFSKTVRAFSHGCVRLHRPRELAEYLLAAN-GWDRAKID 347

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           EVV + + T VKL    PVH  Y++AW  +   IQFR DIYG D
Sbjct: 348 EVVASGERTRVKLEQPTPVHLAYMTAWLGRQGFIQFRPDIYGRD 391


>gi|220931487|ref|YP_002508395.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H
           168]
 gi|219992797|gb|ACL69400.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H
           168]
          Length = 547

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 193/350 (55%), Gaps = 10/350 (2%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSK- 128
            +E   +  KA++  ++I S+  WP +   P L  G+ S  +  LR RL +SGDL   + 
Sbjct: 186 GQELYFRMRKALSHLRNISSKD-WPRVGYGPPLQRGDYSKRIIELRRRLYLSGDLSEEQL 244

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
                FD  +E AV+ FQ RHGL  SG+VD  T+EA+N+PV  +I ++ +N+ R++ L  
Sbjct: 245 NTGTYFDRELEKAVRKFQRRHGLKDSGIVDDKTIEALNIPVKEKINKIIINMERLRWLPR 304

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
               L  V+VNIP   L+ +   KV L S VIVG  + QTP  +  I  I+ NPYW IP 
Sbjct: 305 DNPDL-CVMVNIPEYKLKVIREDKVILESKVIVGSRENQTPSFNDSIEYIVLNPYWYIPD 363

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPG 303
           +I + +++  +++DP YL  +NI ++     EV +   ++++W+   P NF +  RQ PG
Sbjct: 364 NITRYELLPQIKKDPDYLDKHNIQILSGFEGEVKIIPEDQINWDEVTPENFSYKLRQKPG 423

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++ S K  F +  N Y+HDTP   LF    R  + GC+RV   ++L   L+  +  W
Sbjct: 424 PGNSLGSIKFLFPNDFNVYLHDTPSRGLFEYRERALSHGCIRVERPLELAKVLISQS-NW 482

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           S   +  ++ +     ++L   VP++ +Y++ W   D +I +R+DIY  D
Sbjct: 483 SYNEVISIINSGNREVIELKNPVPIYLIYLTVWVDDDGVIHYREDIYQRD 532


>gi|308273623|emb|CBX30225.1| hypothetical protein N47_D30340 [uncultured Desulfobacterium sp.]
          Length = 564

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 185/336 (55%), Gaps = 8/336 (2%)

Query: 85  YQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAV 142
           Y+     GGWP++P  P +  G+    +  L  RL ISGDL  + K     F   +E AV
Sbjct: 212 YKKFSENGGWPQIPAGPKMKKGDRGARIAILHSRLQISGDLSKTDKKDPGVFGDILEKAV 271

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
             FQ RHGL   G+V  +TL  +NV    R +Q+ VN+ R++  L++  G RY+ VNI  
Sbjct: 272 LRFQSRHGLTEDGIVGHATLYELNVSALARFKQIMVNMERLR-WLQRDFGPRYLFVNIAD 330

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L  V+     L+  V+VG+  RQTP+   ++  ++ NP+W IP  + ++D++ L+++D
Sbjct: 331 FKLSVVDENASILKMRVVVGKDYRQTPVFEGKMTYLVINPFWTIPPKLAEEDLLPLIKED 390

Query: 263 PQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYS 317
            + +K   I + +   E  +E+    V+W      NF ++  Q+PG +NA+   K  F +
Sbjct: 391 IEVIKRKKIRIYESWKENAREIDPGSVNWKMVNADNFSYKLVQEPGPLNALGRIKFIFPN 450

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
           + + Y+HDTP   LF+   R  +SGC+R+   ++L  +LL   P W++  + +V+ + +T
Sbjct: 451 KFDIYLHDTPARNLFSREKRNFSSGCIRIEKPLELATYLLHGNPNWTKQKLLDVIDSHET 510

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             V ++  + V  +Y +AW  +  I+QFR+DIY  D
Sbjct: 511 QIVGISNPIAVKILYFTAWVDEQGIVQFRNDIYQRD 546


>gi|194337477|ref|YP_002019271.1| Peptidoglycan-binding domain 1 protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309954|gb|ACF44654.1| Peptidoglycan-binding domain 1 protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 549

 Score =  203 bits (517), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/354 (34%), Positives = 192/354 (54%), Gaps = 8/354 (2%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDP-SKGLSVAF 134
           Q  K +  Y+ I   GGWP L   P L  G     V  LR+RL +SGD+   +   S  +
Sbjct: 190 QLRKGLVRYRTIARAGGWPVLAEGPKLQEGARGKRVMLLRQRLRVSGDIAVLNTDTSTVY 249

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           +  V  AVK FQ R+G+   G+V ++TL  MN+PV+ RI ++++NL R +  L + +   
Sbjct: 250 NREVVEAVKHFQKRNGMVADGVVGATTLRVMNIPVERRIDEIRLNLERYRWFL-RDLEPT 308

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            ++VNIP  +L+ +ENG+    + VI G+  R+TP+  + +  ++ NP WVIP +I+ KD
Sbjct: 309 AIMVNIPRFTLQYIENGQDKWETRVITGKPPRETPLFKADMQYVILNPRWVIPPTILAKD 368

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTK 312
            +  LR+   YL    + +ID  G  +    V+W+     NF +R  Q  G   A+   K
Sbjct: 369 ALPALRKSNSYLNRKRLTIIDRNGAVIDPVSVNWSQYSGGNFPYRLQQSSGDHGALGRIK 428

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
               +R   Y+HDTP   LF    R  +SGCVRV N +DL   +L+D+  WS+  I   +
Sbjct: 429 FLLPNRYIVYLHDTPNKELFAASKRLFSSGCVRVENPVDLATLVLQDSVRWSKVKILSAI 488

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII--PLPE 424
           K+ KT  V L   +PV+ +Y++  +P+   + FRDD+Y  D   +  +  PLP+
Sbjct: 489 KSGKTKTVLLPKRIPVYLLYLTV-TPEGDELFFRDDVYNRDERLLKALNKPLPQ 541


>gi|145219195|ref|YP_001129904.1| peptidoglycan binding domain-containing protein [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205359|gb|ABP36402.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeovibrioides
           DSM 265]
          Length = 550

 Score =  203 bits (517), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 184/343 (53%), Gaps = 12/343 (3%)

Query: 80  KAIAFYQDILSRGGWPELP----IRPLHLGNSSVSVQRLRERLIISGDLDP-SKGLSVAF 134
           +A+A Y+ I   GGWP +P    IRP   G S   V  +R RL ++GD +   K  SV  
Sbjct: 194 EALARYRQIEQAGGWPVVPGGQAIRP---GQSDPRVPLIRRRLSVTGDFEGRGKESSVVL 250

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D+ + +A++ FQ RH L   G+   +TL AMNV    R++QL+VNL R +  + Q +   
Sbjct: 251 DSELAAAIRNFQKRHALQADGVAGGATLAAMNVTARERVQQLRVNLERYRWFVGQ-LEPT 309

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +VLVNI   SL+ V  G +   + VIVG+  R+TP+  + +  ++FNP WV+P +I+ +D
Sbjct: 310 FVLVNIAGFSLQYVHEGSLRWSTRVIVGQPYRKTPVFKADMYSVLFNPRWVVPPTILAED 369

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTK 312
            +  +RQDP YL    + +ID KG  V    ++WN+     F +R  Q  G   A+   K
Sbjct: 370 ALPAIRQDPGYLSRKQLQVIDGKGSPVDPSSINWNAFGAAAFPYRLQQKAGDHGALGRIK 429

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
               +R+  Y+HDTP   LF    R  +SGC+RV N   L   +L D+  W+   I   +
Sbjct: 430 FVMPNRHIVYLHDTPTKDLFEKSSRTFSSGCIRVENPARLAELVLDDSLKWNGGAIRSAI 489

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            T KT    L   +PV  +Y++A + +D +  F +DIY  D  
Sbjct: 490 ATGKTHSEPLPRRIPVFILYLTAVAERDEVF-FLEDIYDRDGA 531


>gi|119357927|ref|YP_912571.1| peptidoglycan binding domain-containing protein [Chlorobium
           phaeobacteroides DSM 266]
 gi|119355276|gb|ABL66147.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 563

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 189/343 (55%), Gaps = 12/343 (3%)

Query: 79  EKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDA 136
           +K +A Y+ I+  GGW ++   + +  G+    V+++R RL  SGDL   S   S  F  
Sbjct: 206 KKGLAHYRVIVKTGGWQKVTEGKKIKEGDRDNRVRQIRRRLQESGDLVFRSADTSRVFSK 265

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL---LEQKMGL 193
            +  AV  FQ R+GL   G   + T+  MN+    RI Q+++N+ R +     LEQ    
Sbjct: 266 AMADAVVRFQKRNGLSVDGAAGAETIREMNISAAERIEQIRINMERYRWFIGDLEQ---- 321

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R VLVNIP  +L+ ++NG+    + VIVG+  R+TP+  + +  I+FNP WVIP +I+ K
Sbjct: 322 RAVLVNIPGFTLQYIDNGQPRWETRVIVGKTGRETPLFKADMQYIVFNPQWVIPPTILAK 381

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMAST 311
           D +  +R+   YL   N+ +ID  G+ V    V+W+     N  +R  Q  G   ++   
Sbjct: 382 DALPGIRKSRSYLYSRNLKVIDRNGRVVDPATVNWSQYTAANLPYRLQQTAGDHGSLGRI 441

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K    +++  Y+HDTP   LF    R  +SGC+RV+N ++L   +L+D+  W+   I   
Sbjct: 442 KFMLPNKHIVYLHDTPHKELFQKSTRNFSSGCIRVQNPLELAELVLQDSVKWNSDAINAA 501

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +KT KT+ V L   +PV+ +Y++A+ P+D  I FR D+Y  DN
Sbjct: 502 IKTGKTSNVNLPKHIPVYLLYLTAF-PQDDAIHFRGDVYNRDN 543


>gi|46202872|ref|ZP_00052464.2| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 265

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 147/228 (64%), Gaps = 2/228 (0%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++  +I FNP W +P SI
Sbjct: 11  LGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNTKATQINFNPTWTVPASI 70

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK-INAMA 309
           ++KD++  +++DP YL DN I ++   G+E+  + V+W S E   + +RQD G   N+M 
Sbjct: 71  VKKDLIPKMQKDPNYLTDNKIRIL-SGGQEISPKSVNWFSDEGTRYTYRQDSGADFNSMG 129

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             +I   +    +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP W R H+E
Sbjct: 130 VVRINIPNPYGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLKDTPGWDRAHVE 189

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           + V++ +     L+  VPV++ YI+AW+  D  +QFRDDIY  D V+V
Sbjct: 190 QAVESGQRIDATLSQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNV 237


>gi|149911942|ref|ZP_01900540.1| hypothetical protein PE36_11037 [Moritella sp. PE36]
 gi|149804989|gb|EDM65018.1| hypothetical protein PE36_11037 [Moritella sp. PE36]
          Length = 409

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/400 (33%), Positives = 213/400 (53%), Gaps = 21/400 (5%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVND---RFDNFLARVDMGIDSDIPIISKETIAQTEK 80
           +S++ K  H +      N  +++ VN    + DN L ++D    SD P+ SK+ +  + +
Sbjct: 18  VSMLGKTTHMTNSMNTTNNKHYAYVNHSNIQPDNLLPKMDAV--SDAPV-SKKVLQFSSR 74

Query: 81  AIAFYQDILS-RGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           A   Y + LS +  W ++ + R LH+G+SS +V  +  RLI+ GD + S   S  +   +
Sbjct: 75  AS--YLNWLSVQYSWEDIALSRLLHIGDSSAAVHEIHSRLILLGDSEESLRFSDVYTVEI 132

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
            +AV+ FQ RHGL    ++   TL+ +N+    R   L+ N M  K      +  RY+LV
Sbjct: 133 AAAVRNFQRRHGLKADAIIGPDTLKWLNINPQRRAELLRQN-MEEKIHFMANLSDRYLLV 191

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           NIPA  L   +NG++ LRS VIVG+  + TPIL S I+ ++ NP W +PRSI++ D++  
Sbjct: 192 NIPAYELLLSDNGEIALRSRVIVGKPKKPTPILTSEISSMVINPSWRVPRSILEDDLLPK 251

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFY 316
           ++ + ++    N  + + + + +     +W       F +R  Q PG  NA+   K  F 
Sbjct: 252 VKMNGEFFSQRNFKVFNYQNQTIEKSPQEWQKLAYGQFPYRLEQMPGTQNALGRYKFYFP 311

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVV 372
           +  + Y+HDT  P LF+N  R  +SGC+R+  + +L  W    L+ + P WSR  I    
Sbjct: 312 NDFSVYLHDTSNPQLFSNANRALSSGCIRIEKVDELANWIANSLVDNKPLWSRLKINR-- 369

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
           +T K  P  L   +PVH VY +AW   + + QFRDDIY L
Sbjct: 370 ETTKWFP--LNDVLPVHLVYWTAWIDDNGLSQFRDDIYAL 407


>gi|83311306|ref|YP_421570.1| hypothetical protein amb2207 [Magnetospirillum magneticum AMB-1]
 gi|82946147|dbj|BAE51011.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
           magneticum AMB-1]
          Length = 535

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/324 (35%), Positives = 170/324 (52%), Gaps = 7/324 (2%)

Query: 94  WPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP +P    L  G +   V  LR RLI SGDL         +DA +  AVK FQ RHGLD
Sbjct: 193 WPTIPDGAKLVPGETDERVPLLRRRLIASGDLADGLAEGKIYDATLAEAVKRFQARHGLD 252

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           P   V   TL  +NVP D R+RQ+  NL R +  + +  G  +V VNI A  +E VE+G 
Sbjct: 253 PDATVGGKTLAHLNVPADARVRQITANLERWR-WMPRSFGRHHVAVNIAAQQMEVVEDGS 311

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V +   V+VG     TP +++ ++ ++ NP W +P SI  K+++  LR+DP YL  + + 
Sbjct: 312 VAMVMRVVVGDTKHPTPSMNTTMSSVVLNPAWRVPTSIANKEILPKLRKDPNYLTSSKLQ 371

Query: 273 MID--EKGKEVFVEEVDWNS-PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           ++D  E   E   + VDWN+  +   +  RQ PG  NA+   K      ++ YMHDTP  
Sbjct: 372 IVDYPEGSPESAGDGVDWNAIGKKFPYRLRQPPGPDNALGQLKFNLTDSDDIYMHDTPNR 431

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
             F+   R  + GCVR+   ++L   +L     W      ++   R T  + L   +PV+
Sbjct: 432 RAFSRSYRALSHGCVRLERPVELGELMLG--ARWQGKLAHDINANRSTRTLMLERTIPVY 489

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
            +Y +AW+ ++  + FRDD+YG D
Sbjct: 490 LMYWTAWADENGNLHFRDDLYGHD 513


>gi|78189746|ref|YP_380084.1| hypothetical protein Cag_1790 [Chlorobium chlorochromatii CaD3]
 gi|78171945|gb|ABB29041.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
          Length = 563

 Score =  199 bits (505), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/340 (34%), Positives = 188/340 (55%), Gaps = 7/340 (2%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFD 135
           +K +A Y++I   GGW  +P   L   G+    V  LR+RL  SGD+  S     +  ++
Sbjct: 216 KKELARYREIAKNGGWSAIPAGTLLQEGSRDARVPLLRQRLAASGDISSSAVADTTTLYN 275

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             V  AVK FQ +HGL   G+V ++TL A+NV  D RI QL+VNL R + LL   +    
Sbjct: 276 PDVTKAVKRFQQQHGLWSDGVVGATTLRAINVSADERIGQLRVNLERCRWLL-HDISPTS 334

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           V+VNIPA +L   E G     + VIVG+  R TP+  + +  ++ NP WV+P +++ KD+
Sbjct: 335 VIVNIPAYTLHYFEQGDRRWSTRVIVGQPKRPTPVFRADMQLLILNPRWVVPSTVLAKDV 394

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKI 313
           +  + +DP YL+   + ++DE G  +    + W+S       +R  Q  G   A+   K 
Sbjct: 395 LPAVIKDPAYLRKKKLRVVDENGTIIDPATIKWSSYSASTLPYRLQQKSGDDGALGRIKF 454

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              +R   Y+HDTP+  LF    R  +SGC+RV++  +L   +L+ +   SR  +E  +K
Sbjct: 455 LMPNRYTIYLHDTPDKALFQKTQRAFSSGCIRVQHPEELARLVLRHSNRESRPSLESRIK 514

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +  T+ ++L  ++PV+ +Y++A  P ++  +FR+DIY  D
Sbjct: 515 SGATSTIRLPQQIPVYLIYLTAL-PCNNKAEFREDIYHRD 553


>gi|117619072|ref|YP_855763.1| cell wall degradation protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560479|gb|ABK37427.1| cell wall degradation protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 433

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/329 (39%), Positives = 166/329 (50%), Gaps = 15/329 (4%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L +  L  G  S  + ++R  L   GD  P       +DA    AVK FQ RHGL  
Sbjct: 106 WPTLTMPTLRAGEVSPELGQIRSILNELGDTAPRHD-DATYDAETLQAVKQFQRRHGLTA 164

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++   T   +N   ++R   L  NL R + L++Q  G RYVLVNIP   L  VE+G  
Sbjct: 165 DGIIGRQTRSWLNTGPEVRASLLLRNLWR-RDLVDQLSGARYVLVNIPDYRLSVVESGNE 223

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
              S VIVG+  R TPIL S I  I+ NP W +PRSI+ KD++  L +DP YL      +
Sbjct: 224 VFTSRVIVGKEQRATPILASEIRSIVLNPAWHVPRSILSKDILPKLGRDPAYLNREQFEV 283

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNT--YMHDTPEP 329
           ID +G  V   E  W       F +  RQ PG  NA+   K  FY  NN   Y+H TP  
Sbjct: 284 IDGEGNPVQFTEEGWQQALASGFPYRLRQKPGDHNALGRYK--FYLPNNEAIYLHSTPRK 341

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK---LATEV 386
            LF    R  +SGC+RV +  DL   LL D    SRY  ++V    K T  K   L T +
Sbjct: 342 ALFEQGARAFSSGCIRVEHADDLAELLLAD----SRYQPDKVASILKETQTKWLPLTTPI 397

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           PV  VY S+W  +D   Q R+DIYG D V
Sbjct: 398 PVFTVYWSSWIDEDGRQQLRNDIYGFDRV 426


>gi|193212014|ref|YP_001997967.1| peptidoglycan-binding domain 1 protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085491|gb|ACF10767.1| Peptidoglycan-binding domain 1 protein [Chlorobaculum parvum NCIB
           8327]
          Length = 583

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 192/355 (54%), Gaps = 25/355 (7%)

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL---RERLIISGDLDPSKGLSVA--- 133
           K +A Y+ + + GGW  +P  P  +G+     +R+   R+RL+++GDL    GL+++   
Sbjct: 202 KGLAKYRKVAAAGGWKPVPAGP-RIGDVGQIDERMPLIRKRLVVTGDLI-EDGLTISAPA 259

Query: 134 -------------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
                        + A +  AVK FQ RHGL+  G++ + T  AM VPV+  I Q+++NL
Sbjct: 260 NSADSTAARQAFVYTAELFDAVKAFQERHGLEVDGIIGTETAGAMAVPVEEWIDQIRINL 319

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            R +      +G  YV+VNIP+ S+E V +  V  +S VIVG+ + QTP+  + I  ++F
Sbjct: 320 ERYR-WYSSSLGSTYVMVNIPSFSVEFVRDDSVRWKSRVIVGKPNLQTPVFKAEIQSVIF 378

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR- 299
           NP WVIP  I+ K+ +  ++++  YL  + + +++ +GK V    V+W + +   F +R 
Sbjct: 379 NPRWVIPSGILAKEALPAIKKNLDYLSRHQLTVVNNQGKPVDPSSVNWAAYQGRGFPYRL 438

Query: 300 -QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            Q  G   A+   K    +R   YMHDTP   LF    R  + GCVRV+N  +L V L  
Sbjct: 439 VQASGDDGALGRIKFNMPNRFTVYMHDTPTKPLFERSYRAFSHGCVRVQNPNELGVLLFN 498

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           D   W    IE ++ T KT  + L   +PV+F+Y +A+   D+ I FR D+Y  D
Sbjct: 499 DPVKWDMNRIEAMIDTGKTRTINLPERIPVYFMYQTAFPDGDN-IDFRYDVYDRD 552


>gi|21674674|ref|NP_662739.1| hypothetical protein CT1862 [Chlorobium tepidum TLS]
 gi|21647879|gb|AAM73081.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 571

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 186/352 (52%), Gaps = 21/352 (5%)

Query: 80  KAIAFYQDILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           K +  Y+ I   GGW  +   P    +G     +  +R+RLI+SGDL   K ++ A D+ 
Sbjct: 202 KNLLRYRKIAENGGWQPVYQGPNIEKVGQVDKRMPLIRQRLILSGDLAADKLVAPA-DSS 260

Query: 138 VESA----------------VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           + SA                V  FQ  HGL   G++   TL AMN P +LR  Q++VNL 
Sbjct: 261 LSSAAPVPSDQVYTQELFDAVLAFQQSHGLSADGIIGLETLNAMNYPAELRADQIRVNLE 320

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R ++     +G  YV+VNIPA SL+ V++ +V  +S VIVG+ D QTPI  ++I  + FN
Sbjct: 321 R-ERWYGGILGGTYVMVNIPAFSLKYVKDNEVRWKSRVIVGKPDTQTPIFAAQIQSVTFN 379

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P+WVIP  I+ K+ +  +R+D  YL  + + ++D  GK V    V+W S     +   Q 
Sbjct: 380 PHWVIPPGILSKEAIPAIRKDIGYLAKHQLTVVDSNGKPVDPSRVNWYSDGGFPYRLVQA 439

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
            G   ++   K    +R   YMHDTP   LF   +R  + GCVRV    +L   L++D+ 
Sbjct: 440 SGDDGSLGRIKFNMPNRFMVYMHDTPTKPLFERSMRAYSHGCVRVDRPYELAEQLMRDSK 499

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            WS   IE  + T KT  + L  +VPV+F Y +A++  +  I FR+DIY  D
Sbjct: 500 NWSLSKIEAAINTGKTRTIPLTVKVPVYFFYQTAFADGNK-IGFRNDIYDRD 550


>gi|85860925|ref|YP_463127.1| peptidoglycan binding protein [Syntrophus aciditrophicus SB]
 gi|85724016|gb|ABC78959.1| peptidoglycan binding protein [Syntrophus aciditrophicus SB]
          Length = 567

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 184/356 (51%), Gaps = 16/356 (4%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPEL--PIRPLHLGNSSVSVQRLRERLIISG------ 122
           S    A   KA++ Y+DI  R  WP +   IR L  G+ S  V  LRERL +        
Sbjct: 202 SSPAYANLRKALSKYRDIERRRKWPVMMEGIR-LKKGDRSEQVALLRERLDVPEVFPFWE 260

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           D +  +G    FD Y+E AVK FQ  HGL   G+  S TLEAMNV    R+RQ++VNL R
Sbjct: 261 DREDGEG-KYLFDEYLERAVKAFQKSHGLIADGVAGSETLEAMNVTAAERVRQIKVNLER 319

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++ + +   G R V++NIP   L  +E  K    S ++VG+  + TP+  SRI   + NP
Sbjct: 320 LRWIPDDP-GDRAVIINIPEFRLRVLEKEKEVFNSRIVVGKYAQNTPVFGSRITHFILNP 378

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWN--SPEPPNFI 297
           YW +PRSI  ++++ L++Q P+YL   ++ ++   G +  +     +DW   +    N+ 
Sbjct: 379 YWHVPRSIAVEEILPLIKQSPEYLNWEDMKVLSGSGAKTRIVPPWTIDWENMTAREFNYH 438

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQDPG  N +   K  F +  + Y+HDTP   LF    R  + GC+RV N ++L V LL
Sbjct: 439 LRQDPGPRNPLGRIKFYFPNPYDVYLHDTPYLHLFEQKKRNFSHGCIRVENPVELAVVLL 498

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                 +R  +   ++T K    +L   V +   Y + W+  D  + FR DIY  D
Sbjct: 499 GGNSIETRKQLLSAIETGKRKQFQLRQPVSIRVFYFTTWAEADGTVHFRKDIYNHD 554


>gi|120555804|ref|YP_960155.1| peptidoglycan binding domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325653|gb|ABM19968.1| Peptidoglycan-binding domain 1 protein [Marinobacter aquaeolei VT8]
          Length = 560

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/332 (35%), Positives = 179/332 (53%), Gaps = 16/332 (4%)

Query: 94  WPEL----PIRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           WP +     IRP   G++   +  +R RL + GDL    P       +D  + +A+ LFQ
Sbjct: 203 WPAIVSGPSIRP---GDTDNRIPDIRRRLALLGDLSGDSPEASNHQHYDDALATAIPLFQ 259

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
            RHGL+P G+V   TL A+N+    RI +L  NL R + L E  +G  YV+VNI    L 
Sbjct: 260 ARHGLEPDGIVGRDTLTALNLLPLERIYRLDANLERWRWLPE-SLGETYVVVNIAGFELV 318

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
            VE+G+   R  VIVGR  RQTP+   RI  ++FNP W +PR ++ +D + ++R DP+YL
Sbjct: 319 LVESGEQVHRQRVIVGRPYRQTPVFSDRIRYLVFNPTWTVPRKLMIEDQLPIIRSDPEYL 378

Query: 267 KDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNT 321
           +     +    G    EV   E+DW      NF ++  Q PG  NA+   K  F ++ + 
Sbjct: 379 ERLGFKVFRGWGANQSEVDPAEIDWTELSKNNFPYQLIQQPGPQNALGQVKFMFPNQYDI 438

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
           Y+HDTP   LF+ + R  +SGC+R+    +L   LL +T  W++  IE+ + T +   V 
Sbjct: 439 YLHDTPAQSLFSRLERTLSSGCIRLERPFELAERLLANTNGWNKKRIEQTLATAEPATVV 498

Query: 382 LATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L+  VPV+  Y + W     ++QFR+D+Y  D
Sbjct: 499 LSEPVPVYLQYWTTWIDPAGVLQFRNDVYDRD 530


>gi|194334694|ref|YP_002016554.1| peptidoglycan-binding domain 1 protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194312512|gb|ACF46907.1| Peptidoglycan-binding domain 1 protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 565

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/379 (33%), Positives = 198/379 (52%), Gaps = 24/379 (6%)

Query: 53  DNFLARVDMGIDSDIPIISKETIA-------QTEKAIAFYQDILSRGGWPELPIRP--LH 103
           D  L R+   I+ D    + E I          +KA+A Y+D  S GGWP +P  P   H
Sbjct: 172 DGLLWRLQNAIEGDSIAAALEQIRPVHPKYLSLKKALARYRDYESDGGWPSIPAGPSIRH 231

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAF--DAYVES-----AVKLFQMRHGLDPSGM 156
            G+    +  LR RL I+G+      +  +F   A V S     AV +FQ R+GL+  G+
Sbjct: 232 EGDRDERIPVLRRRLEITGEAVSLATVDTSFADSAMVYSKELVDAVMVFQRRNGLEVDGV 291

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           V   TLEA+N+    R+ Q+++NL R +  +  K+   +++VNI   +++ VENG +   
Sbjct: 292 VGPRTLEALNISASQRVEQIRINLERYRWFI-TKLEPTFIMVNIAGFTIQYVENGALTWS 350

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
           S VIVG    +TP+  + +  ++FNP W +P  I++K+ +  ++ D  YL  N + +ID 
Sbjct: 351 SRVIVGEPFWKTPVFRADMRYLIFNPSWNVPPGILKKEALPSMKSDGGYLSRNGLQVIDR 410

Query: 277 KGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
            G  V    +DW      +F +  RQ PG  NA+   K  F +R+  Y+HDTP   LF+ 
Sbjct: 411 NGNVVDPSSIDWAGYSAGSFPYRLRQPPGVRNALGRVKFMFPNRHFVYLHDTPGKHLFDR 470

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
             R  + GC+R+ N +DL   LL     WS   IE  + + KT  V L+  +PV  +Y++
Sbjct: 471 SERAFSHGCIRLENPLDLAGVLLG----WSPEQIESALSSGKTRTVNLSRPIPVFLLYLT 526

Query: 395 AWSPKDSIIQFRDDIYGLD 413
           A +  D ++ FR+D+Y  D
Sbjct: 527 AVAEGDEVL-FRNDVYNRD 544


>gi|309389689|gb|ADO77569.1| ErfK/YbiS/YcfS/YnhG family protein [Halanaerobium praevalens DSM
           2228]
          Length = 546

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 210/405 (51%), Gaps = 14/405 (3%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL---ARVDMGIDSDIPIISKETIA 76
           L +    +   I+A ++ E  N    S+ + +  N L     ++  ++S++P    +   
Sbjct: 133 LDLASDYLNGKINAEIIIEDNNYQADSLQSKKLLNALLAKENIEESLNSNLP--KTKAYQ 190

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNS-SVSVQRLRERLIISGDL-DPSKGLSVAF 134
           +  + + +Y+D      WP++  + +   NS  V V+ LR+ L     L + +      F
Sbjct: 191 KLREKLFYYRDSGQINAWPQIKGKQILTKNSKGVRVKELRQNLKAKNYLTENNSKQDYIF 250

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
              ++ AV  FQ+ +GL P G+V   TL+A+N+P+  RI+QL VN+ R + L E  +G R
Sbjct: 251 TEQLKEAVMKFQVDYGLTPDGVVGPKTLKALNIPLSERIKQLIVNMERWRWLPEN-LGDR 309

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y+ VNI    L+  E  +  +    IVG+  R TP+    I  ++ NPYW +P +I  +D
Sbjct: 310 YIYVNIANYKLKLYEEQQKIMEMKTIVGKKQRSTPVFSDEIKYLVLNPYWYVPHTIAVED 369

Query: 255 MMALLRQDPQYLKDNNIHMIDEKG----KEVFVEEVDWN--SPEPPNFIFRQDPGKINAM 308
            + L+++D  YL+D N  +    G    +++   +VDW   + +  N++ RQ+PG  NA+
Sbjct: 370 KLPLIKKDLNYLEDKNYSLFKYIGNNRLEKIDPTKVDWTKITKDNFNYLLRQNPGDQNAL 429

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F ++ + Y+HDTP   LF+   R  +SGC+R+   I+L  +LL D   W R +I
Sbjct: 430 GRIKFMFPNKFSIYLHDTPSQYLFSEQERSFSSGCIRIEKPINLAEYLLIDQEKWGRENI 489

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           E  +K  K   V L   + ++  Y +AW  K++ + FR+DIY  D
Sbjct: 490 EAAIKKDKEKIVYLKKPIKIYLQYNTAWVDKENNLNFREDIYNRD 534


>gi|77918680|ref|YP_356495.1| hypothetical protein Pcar_1075 [Pelobacter carbinolicus DSM 2380]
 gi|77544763|gb|ABA88325.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 598

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 186/343 (54%), Gaps = 14/343 (4%)

Query: 82  IAFYQDILSRGGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDA 136
           +A Y+ +   GGWP L    P+RP   G+    +  LR  L++ GDL+ S+  S    DA
Sbjct: 220 LAHYRQLALGGGWPVLADGPPVRP---GDRDARLPALRRFLVLVGDLESSRQSSGWRMDA 276

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
              +A+K FQ+RHGL   G++   TL  +NVPV  RI QL +NL R ++  +Q  G RY+
Sbjct: 277 VTVAALKRFQVRHGLRADGVLGKDTLAQINVPVGRRIEQLGLNLER-ERWPKQDAGDRYL 335

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            V+I   +L  V+ G+  +R  V+VG   R+TP+  + +  ++F PYW +P +I+++D +
Sbjct: 336 QVDITDFTLTLVDGGREIMRMPVVVGTSFRRTPVFSALMTYLVFAPYWTVPPTILEQDKL 395

Query: 257 ALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPPNF--IFRQDPGKINAMAST 311
            +++ +P YL  ++  ++    +  + +    +DW +    +F  + RQ PG  N +   
Sbjct: 396 PVIKANPDYLDSHHYEIVAWGKDPNRTIDAASIDWKTITAKSFPGMLRQKPGPWNPLGKV 455

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F +  + Y+HDTP   LF    R  +SGC+R+   ++L ++LL     W    I++ 
Sbjct: 456 KFMFPNAYHVYLHDTPAQYLFAKQQRTFSSGCIRIARPLELAIYLLDGQKGWDSERIKKE 515

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +   K   V+L   +PVH +Y +AW      +QFR+D+Y  D 
Sbjct: 516 MAASKPYTVRLKNPIPVHILYRTAWVDVQGRLQFRNDVYERDQ 558


>gi|218781317|ref|YP_002432635.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762701|gb|ACL05167.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 563

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 162/285 (56%), Gaps = 6/285 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           F+  +E+A+K FQ   GL+  G+   +TL A+N      I  ++ NL R +  + Q +G 
Sbjct: 267 FNESLEAALKKFQASWGLEADGVCGPATLHAVNRSEKDNIAAIRANLERWR-WMPQNLGD 325

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R++LVNI    L  VENG+  L    IVG++ R+TP+   R+  ++ +PYW +P SI +K
Sbjct: 326 RHILVNIADFHLAVVENGEELLAMKAIVGKLYRKTPVFSGRLTYLVISPYWDVPPSIARK 385

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR--QDPGKINAM 308
           D + L+++DP Y   N+  +    G   +E+    VDW +  P NF +R  Q PG  NA+
Sbjct: 386 DKLPLMQKDPNYFTANHFLVYQGWGADSREIDPASVDWKALGPNNFPYRLRQKPGPGNAL 445

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F +++N Y+HDTP   LF    R  +SGC+R+++ I L  +LLKD P W+R  I
Sbjct: 446 GRIKFMFPNKHNVYIHDTPSHDLFAKSQRNFSSGCIRIQDPIGLAEYLLKDAPGWNREAI 505

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           E+ V  +    V L+  +PVH +Y +A+      + FR+DIYG D
Sbjct: 506 EDAVDNKIEKTVSLSRPIPVHIMYFTAFGDTRGAVHFRNDIYGRD 550


>gi|189501015|ref|YP_001960485.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeobacteroides
           BS1]
 gi|189496456|gb|ACE05004.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeobacteroides
           BS1]
          Length = 566

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 189/349 (54%), Gaps = 16/349 (4%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPL--HLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           + +  ++ +A Y+ + + GGW  +P  P    +G     +  LR RL ISG+++    + 
Sbjct: 204 SYSSLKEGLARYRRLAADGGWGTVPEGPTIKEIGQYDARIPALRGRLEISGEIEQLSKVD 263

Query: 132 VAF-------DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
            ++          ++ AVK FQ RHGL   G V   TL A+NVPV+ R+ Q+++NL R +
Sbjct: 264 TSYADEAMRYSVGLQEAVKKFQNRHGLQEDGEVGPKTLRALNVPVEKRVEQIRINLERYR 323

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
             + QK+   Y+LVNI   ++   E G     S VIVG    +TP+  +++  ++FNP W
Sbjct: 324 WFV-QKLEPTYLLVNIAGFNITYFEQGAFKWGSRVIVGEPFWKTPVFKAQMQYVIFNPSW 382

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P  I++K+ +  +R+DP YL  + + ++D  G  V    V+W S    ++  RQ PG 
Sbjct: 383 NVPPGILRKEALPAIRKDPGYLSRHGLQVVDRNGNVVNPGSVNWAS-GAQSYRLRQPPGS 441

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   K  F +++  Y+HDTP   LF+   R  + GC+R++N +DL   LL     WS
Sbjct: 442 RNALGRVKFMFPNKHLVYLHDTPGKHLFDKSSRAFSHGCIRLQNPLDLAELLL----GWS 497

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              + + V   +T  + L T++PV  +Y++A +  +  +QF++D+Y  D
Sbjct: 498 GEKVRQTVSAGRTRRINLPTKLPVFLLYLTAVAEGEE-VQFKNDVYSRD 545


>gi|256823023|ref|YP_003146986.1| ErfK/YbiS/YcfS/YnhG family protein [Kangiella koreensis DSM 16069]
 gi|256796562|gb|ACV27218.1| ErfK/YbiS/YcfS/YnhG family protein [Kangiella koreensis DSM 16069]
          Length = 570

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/328 (36%), Positives = 177/328 (53%), Gaps = 9/328 (2%)

Query: 94  WPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES----AVKLFQMR 148
           WP + ++P +    +   ++ +  RL+  GDL         F    E     AV+ FQ+R
Sbjct: 229 WPAIDLQPSIKPQMADPRLEAIAVRLMFWGDLPADWAYLAPFPMRYEDGLIRAVEHFQLR 288

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   T+ A+N+    RI QL VNL +I+   E K   R + VNIP+  L A+
Sbjct: 289 HGLVADGVLGKKTIAALNITPQQRIEQLVVNLEQIR-WHELKPASRLIKVNIPSFELLAL 347

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           ENG+V LR  VIVG++ R+TPI   +I  ++ NP WV+P  +  KD + L++Q+PQYL D
Sbjct: 348 ENGEVRLRMPVIVGQLKRKTPIFEEKIQYLVLNPTWVVPWELATKDKLPLIQQNPQYLLD 407

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDT 326
           N   +  +  K      +DW      NF +R  Q PG  NA+   K  F +    Y+HDT
Sbjct: 408 NQFSVYLQDFKIEDPTRIDWAQVTRANFPYRLVQAPGSGNALGQVKFMFPNPYEVYLHDT 467

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P+  LFNN +R  +SGC+R++  +DL  W+L+ T  +S   IE  +  + T  + L + V
Sbjct: 468 PDKSLFNNELRAFSSGCIRIQRPLDLLWWILR-TNGFSDIDIENQLNKKHTNTISLTSPV 526

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           P+   Y +A+   D  IQFR DIY  D 
Sbjct: 527 PIRLEYRTAYWGLDQTIQFRADIYQRDT 554


>gi|163793880|ref|ZP_02187854.1| Peptidoglycan-binding domain 1 protein [alpha proteobacterium
           BAL199]
 gi|159180991|gb|EDP65508.1| Peptidoglycan-binding domain 1 protein [alpha proteobacterium
           BAL199]
          Length = 515

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 188/366 (51%), Gaps = 17/366 (4%)

Query: 64  DSDIPIISKETIA-------QTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLR 115
           D+D P+ + E          +  + +A Y+ +   GGWP +P+   L  G     V  +R
Sbjct: 142 DADDPVRAIEQAGPSNPIYHRLRRLLANYRGLAVHGGWPSVPVGDALKPGMRDPRVAAIR 201

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
            RL++S  L  +      +D     A++ FQ RHGL+  G+V + TL A+NVP++ RI Q
Sbjct: 202 TRLMLSESLTLTSDDPEFYDDGFGLAMRGFQRRHGLEDDGVVGTRTLAALNVPIEHRIEQ 261

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           + VN+ R +  +  + G  +V VN+    L+ V  G V +   V+VGR  R+TP+   RI
Sbjct: 262 IVVNMERFR-WMPDEFGDDHVFVNLADFMLDYVRRGLVAMSMRVVVGRQYRETPVFSDRI 320

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI-DEKGKEVFVE--EVDWNSPE 292
             +  NP W +P  I  +D+++ +R +P YL      +    +     ++   VDW+S  
Sbjct: 321 RYLELNPTWTVPAKIASEDLLSKIRANPSYLSSAGFEVFAGSRDNATLIDPASVDWSSLA 380

Query: 293 PPNF--IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              F    RQ PG+ NA+   K  F +R + Y+HDTP   LF   VR  +SGC+R+   +
Sbjct: 381 KGRFPYTLRQQPGRQNALGRVKFMFPNRFDIYLHDTPARELFRRSVRTFSSGCIRLEKPL 440

Query: 351 DLDVWLL-KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
           DL   LL  D     R  I  V+++ KTT + L   V VH  Y++AW  +   ++FRDD+
Sbjct: 441 DLASRLLVADGQDPDR--IGSVLESAKTTRINLREPVAVHLTYLTAWVGEGGTVEFRDDV 498

Query: 410 YGLDNV 415
           YG D +
Sbjct: 499 YGRDAL 504


>gi|254512058|ref|ZP_05124125.1| peptidoglycan-binding domain 1 [Rhodobacteraceae bacterium KLH11]
 gi|221535769|gb|EEE38757.1| peptidoglycan-binding domain 1 [Rhodobacteraceae bacterium KLH11]
          Length = 533

 Score =  193 bits (490), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 193/348 (55%), Gaps = 11/348 (3%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           S++ IA  ++  A  + ++++GGW E +P+  L LG++  +V +LR RL+  G L P+  
Sbjct: 173 SRQYIALMKQKKAL-EALIAQGGWGETVPVTKLELGDTGANVIKLRNRLVAMGYLKPTA- 230

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            S  +D  +  AV+ FQ+ HGL+P G+    T+  +N PV  R++ + V L R + L E+
Sbjct: 231 -SPIYDDELLGAVQAFQIAHGLEPDGVAGKGTITEVNRPVSDRLKAVYVALERERWLPEE 289

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIP 247
           + G R++LVN    S + V++G+V   +  ++G+   DR++P     +  ++ NP W +P
Sbjct: 290 R-GERHILVNQADFSAKIVDDGQVTFETRAVIGKNTHDRRSPEFSDVMEHMVINPSWYVP 348

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKI 305
           RSII K+ +  LR +P  +   +I + D +G++V    VD+N     NF F  RQ P K 
Sbjct: 349 RSIITKEYLPKLRANPNAV--GHIQITDRQGRQVNRGAVDFNQFTARNFPFSMRQPPSKS 406

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NA+   K  F ++ N Y+HDTP+  LF+  VR  + GC+R+    +    LL       +
Sbjct: 407 NALGLVKFMFPNKYNIYLHDTPQKSLFSREVRAFSHGCIRLAQPFEFAYALLAKQEENPK 466

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                V+ T K T VKL  +VPVH +Y +A+      +Q+R D+Y  D
Sbjct: 467 AFFHRVLNTGKETTVKLDKKVPVHLIYRTAYIGPKGEVQYRRDVYDRD 514


>gi|189347548|ref|YP_001944077.1| Peptidoglycan-binding domain 1 protein [Chlorobium limicola DSM
           245]
 gi|189341695|gb|ACD91098.1| Peptidoglycan-binding domain 1 protein [Chlorobium limicola DSM
           245]
          Length = 560

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 189/347 (54%), Gaps = 14/347 (4%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDL-----DPSKG 129
           A+ +K +A Y+ I   GGW ++P       G     V  LR+RL  SGDL     D SK 
Sbjct: 200 AELKKGLARYRVIARAGGWQKVPEGDSFREGVRDSRVPLLRKRLQQSGDLPGGVTDSSK- 258

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               + A + +AVK FQ R+GL   G+  ++T+  +N+    R+ Q+++NL R +  +  
Sbjct: 259 ---VYTAAMANAVKRFQKRNGLSVDGVAGTATIGEINISAAERVDQIRLNLERYRWFVND 315

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +   YVLVNI   +L+ +ENG+    + VIVG+  R+TP+  + +  I+FNP WVIP +
Sbjct: 316 -LEPTYVLVNIAGFTLQYIENGRYRWGTRVIVGQPYRETPVFKADMQYIVFNPQWVIPPT 374

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINA 307
           I+ +D +  +R    YL    + +ID +G+ V    V+W+     NF +R  Q  G   A
Sbjct: 375 ILAEDALPAIRNSRSYLDRKKLRVIDSRGRVVDPASVNWSGYSAANFPYRLQQTAGDHGA 434

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    +++  Y+HDTP   LF    R  +SGC+RV N +DL   +L+D+  W++  
Sbjct: 435 LGRIKFMMPNKHVIYLHDTPTKNLFEKSERTFSSGCIRVENPLDLAQLVLQDSVKWNKTS 494

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           I+  + T KT+ V L   +PV  +Y++A +  +  IQFR D+Y  D+
Sbjct: 495 IDSTIGTGKTSTVNLPKRIPVFLLYLTAIAEGEE-IQFRRDVYNRDD 540


>gi|145298228|ref|YP_001141069.1| hypothetical protein ASA_1213 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851000|gb|ABO89321.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 494

 Score =  192 bits (488), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 163/327 (49%), Gaps = 11/327 (3%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L +  L  G +S  + ++R  L   GD  P       +D   + A+K FQ RHGL  
Sbjct: 167 WPTLTMPTLRAGEASPELGQIRTILNELGDGAPRHD-DATYDVDTQQAIKQFQRRHGLTA 225

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++   T   +N    +R   L  NL R + L++   G RYVLVNIP   L  VE+G  
Sbjct: 226 DGIIGRQTRTWLNTGPQVRASLLLRNLWR-RDLVDHLSGARYVLVNIPDYRLSVVESGNE 284

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
              S VIVG+  R TPIL S I  I+ NP W +PRSI+ KD++  L +DP YL      +
Sbjct: 285 VFTSRVIVGKEQRATPILASEIRSIVLNPPWHVPRSILSKDILPKLGRDPAYLNREQFEV 344

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
           ID +G  V   E  W       F +  RQ PG  NA+   K    + +  Y+H TP   L
Sbjct: 345 IDGEGNPVQFTEEGWYQALAAGFPYRLRQKPGDHNALGRYKFYLPNNDAIYLHSTPRKAL 404

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK---LATEVPV 388
           F    R  +SGC+RV +  DL   LL D    SRY  ++V    K T  K   L T +PV
Sbjct: 405 FEQGARAFSSGCIRVEHADDLAELLLAD----SRYQPDKVASILKNTQTKWLPLTTPIPV 460

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNV 415
             VY S+W  ++   Q R+DIYG D V
Sbjct: 461 FTVYWSSWIDEEGRQQLRNDIYGFDRV 487


>gi|294140649|ref|YP_003556627.1| putative peptidoglycan binding domain-containing protein
           [Shewanella violacea DSS12]
 gi|293327118|dbj|BAJ01849.1| putative peptidoglycan binding domain protein [Shewanella violacea
           DSS12]
          Length = 475

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 184/348 (52%), Gaps = 13/348 (3%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSK 128
           ISK+ +  + K I +   +  R  W EL     L LG+S   V  +  RL + GDL    
Sbjct: 119 ISKDYLTTSNK-IRYLLWLEQRDDWSELASNTWLKLGDSHSLVPEISSRLKVLGDLRQYD 177

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
            ++  FDA V + VK FQ+RHGL   G++   TL  +N+    R   L +N +     L 
Sbjct: 178 PINTLFDANVNNGVKRFQLRHGLTLDGIIGPETLSWINMKPVKRAELLAINFINKTGYLA 237

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
             +  R++++NIPA  LE ++NG+V L+S VIVG+  RQTP L SRI+ ++ NP W +PR
Sbjct: 238 -SVEPRFLIINIPAFELELIDNGQVALQSRVIVGKPYRQTPQLSSRISNLVINPSWRVPR 296

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKIN 306
           S++ +D++  +R+D  Y++  N  + D  G+ V     +W      +F +R  Q PG+ N
Sbjct: 297 SLLTRDLLPKVREDGGYIQARNFDVFDNNGEIVSKTSQEWQDLAHGHFPYRLVQIPGEGN 356

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPT 362
            +   K  F + ++ Y+HDT +  LF    R  +SGC+R+ N+  L  W    L++D  T
Sbjct: 357 TLGRYKFYFENEHSVYLHDTVDKELFEESNRALSSGCIRIENVEGLANWMASNLVRDKQT 416

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           W     E      KT    L   +P++ VY +AW  +    QFR+DIY
Sbjct: 417 WVDMQPER----HKTQWFSLEQSLPIYLVYWTAWVDQWGNAQFRNDIY 460


>gi|127512756|ref|YP_001093953.1| peptidoglycan binding domain-containing protein [Shewanella loihica
           PV-4]
 gi|126638051|gb|ABO23694.1| Peptidoglycan-binding domain 1 protein [Shewanella loihica PV-4]
          Length = 458

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 168/323 (52%), Gaps = 14/323 (4%)

Query: 97  LPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           LP+ P   L  G+S   +  +R RL   GD        + FD  +++A+  FQ RHGL P
Sbjct: 127 LPLEPQGWLKPGDSHRIIPEIRVRLQALGDYPQGDTSGLYFDETLKAAMIKFQTRHGLKP 186

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
             ++  +TL  +N     R + L VN +R  + L   +G RY+L+NIPA  +  V++ +V
Sbjct: 187 DAIIGPATLSWLNRTPRERAQLLAVNFIRRAEYLAD-IGERYLLINIPAYEMWLVDDNQV 245

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            LRS VIVG+  RQTPI+   I  ++ NP W +PR ++  D++  +R+D  Y+   N  +
Sbjct: 246 ALRSKVIVGKPYRQTPIISGEIKNLVLNPSWRVPRRLLTHDLLPKVREDGSYISSRNFEV 305

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            D +G+ V   + +W       F +R  Q PG  N +   K  F +  + Y+HDT +  L
Sbjct: 306 FDYQGERVIKSDDEWRDIAKGKFPYRLVQKPGVGNTLGRYKFFFPNEYSVYLHDTSDKAL 365

Query: 332 FNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
           F    R  +SGC+R+  +  L  W    L++D  TW R  IE      KT        +P
Sbjct: 366 FQRSDRALSSGCIRIEKVEQLANWMASHLVRDKQTWVRMQIER----DKTQWFAFDAGLP 421

Query: 388 VHFVYISAWSPKDSIIQFRDDIY 410
           +H VY ++W   D++ QFRDDIY
Sbjct: 422 IHLVYWTSWLDDDNVAQFRDDIY 444


>gi|118588095|ref|ZP_01545505.1| hypothetical protein SIAM614_10978 [Stappia aggregata IAM 12614]
 gi|118439717|gb|EAV46348.1| hypothetical protein SIAM614_10978 [Stappia aggregata IAM 12614]
          Length = 535

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 189/370 (51%), Gaps = 12/370 (3%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVS 110
           F+N    VD G   +      +  A+ ++ +A Y++  + GG+ ++P    L  G S   
Sbjct: 159 FENAEQAVDFGAFLESLAPQTDNYARLKRRLAQYREKAAAGGFAQVPEGEVLKPGMSDPR 218

Query: 111 VQRLRERLI---ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +  LR RL    I G  D +  +   +D  +  AVKLFQ  HGL+  G++   T+  +N+
Sbjct: 219 LTVLRTRLAEEDIPGAADHTGDI---YDGALVEAVKLFQEYHGLETDGVIGKDTIAQLNI 275

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
           P+  ++ Q+++N+ R ++ +    G  YV VN+   +L+ V +GK    + V+VG+    
Sbjct: 276 PIQEKLIQMELNMER-RRWMPDDPGQFYVFVNLADQNLKVVRDGKTIHTARVVVGKPYHA 334

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           TP+   R+  +  NPYW +P SI  K+ +  L+Q+P  L   +I +  E G EV   +V 
Sbjct: 335 TPVFSDRLEYVEINPYWNVPYSIATKEYLPKLKQNPTALNGKSIRVFQE-GNEVAPTQVA 393

Query: 288 WNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           WNS    NF F  RQDPG  NA+   K  F +R N Y+HDTP   LF    R  + GC+R
Sbjct: 394 WNSYSGGNFPFRLRQDPGADNALGRIKFMFPNRFNIYIHDTPSKSLFARAERAFSHGCIR 453

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V +   L   LL D+   +  H E +    + T VK   E+ VH  Y++AW  KD    F
Sbjct: 454 VSDPFALADVLLVDSDA-TPGHWEAIRDGGERTVVKPKVEIDVHLTYLTAWMNKDGSTHF 512

Query: 406 RDDIYGLDNV 415
           R DIY  D V
Sbjct: 513 RKDIYNRDKV 522


>gi|152991962|ref|YP_001357683.1| hypothetical protein SUN_0366 [Sulfurovum sp. NBC37-1]
 gi|151423823|dbj|BAF71326.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 712

 Score =  189 bits (480), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 188/348 (54%), Gaps = 10/348 (2%)

Query: 80  KAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAY 137
           +A+  Y++I   GGW +LP  + L  G SS  V  LRERL I GD +  S      +   
Sbjct: 359 QALKRYKEIAENGGWKKLPEFKNLKPGMSSSVVPALRERLAIEGDYVCDSNETGNRYRGC 418

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY-V 196
           +  AVK FQ RHGL+ +G +   T +A+NV  + ++++L++NL RIK +  ++   RY +
Sbjct: 419 LVDAVKKFQARHGLEAAGFIGKMTRKALNVSAEEKVKKLKLNLDRIKWI--KRDNERYHI 476

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            VNIP+  +   ++ ++     VI GR   +TPI + R+  I+ NPYW IP SII+ + +
Sbjct: 477 YVNIPSFHMYMYDDKEMIRTMRVITGRKGHETPIFYGRVRTIVLNPYWRIPPSIIRHETI 536

Query: 257 ALLRQDPQYLKDNNIHM---IDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAST 311
             L++DP Y    NI +     E   +V   +V+W+    + P + F Q PG+ NA+   
Sbjct: 537 PKLQKDPGYTNKKNIEIHTGYSEHSPKVNPYKVNWHKYGRKLPPYRFMQSPGEKNALGKV 596

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ + YMHDT +  LF    R  + GCVR++   +L     +  P       +E+
Sbjct: 597 KYLFPNKYSVYMHDTNQRYLFVKDYRALSHGCVRLQKPFELLETFAEIEPKIDYERSKEI 656

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
           +   K TP +L+  +PV  VY++A   K+  + F DD+YG D + + +
Sbjct: 657 LDENKKTPYRLSKSIPVDIVYLTALVSKEGTVMFYDDVYGYDRMQMAM 704


>gi|212635582|ref|YP_002312107.1| hypothetical protein swp_2794 [Shewanella piezotolerans WP3]
 gi|212557066|gb|ACJ29520.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 464

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/318 (35%), Positives = 174/318 (54%), Gaps = 14/318 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           IRP   G S  S+  + +RL++ GD   S   + + D  + + V+ FQ RHGL+P G++ 
Sbjct: 136 IRP---GMSHKSLLAIADRLMLLGDGVASAQSAESLDDRLVNGVRRFQRRHGLNPDGIIG 192

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             TL+ +NV    R R L  + ++  + + Q+   +++++NIPA  +E +  GKV L S 
Sbjct: 193 PETLKWINVDPMERARILAKSFVQKAEFMSQR-AEQFLVINIPAYEMELISQGKVELESR 251

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           VIVG+  RQTP+L S I+ ++ NP W +P+ I+  D++  +R D  Y++     + D +G
Sbjct: 252 VIVGKPYRQTPLLSSAISNVVINPSWRVPKKILFNDLLPQVRIDGNYIEQREFDVFDREG 311

Query: 279 KEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            +V      W   +  P  F F Q PG  N +   K  F +  + Y+HDT +P LFN   
Sbjct: 312 NQVVRSAQQWRDLAAGPFPFRFVQRPGVNNTLGRYKFYFPNDYSVYLHDTSDPKLFNKSY 371

Query: 337 RFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           R  +SGC+R+ N+  L  W    L+KD  TW   HI+      KT    L + + VH VY
Sbjct: 372 RALSSGCIRIENVEGLANWMAANLVKDKQTWVDRHIDR----NKTQWFALNSTLNVHLVY 427

Query: 393 ISAWSPKDSIIQFRDDIY 410
            +AW  KD++ QFR+DIY
Sbjct: 428 WTAWIDKDNLAQFRNDIY 445


>gi|218680582|ref|ZP_03528479.1| Peptidoglycan-binding domain 1 protein [Rhizobium etli CIAT 894]
          Length = 150

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 84/130 (64%), Positives = 103/130 (79%), Gaps = 1/130 (0%)

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
           E +DWN  E PN +FRQDPGK NAMASTKI FY++N  YMHDTP+  LFN ++RFE+SGC
Sbjct: 4   ETIDWNG-EAPNLMFRQDPGKTNAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGC 62

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           VRV+N+ DL  WLL++TP W+R  +E+V+ T   TPVKLATEVPV+FVYISAW   D I+
Sbjct: 63  VRVQNVRDLSNWLLRETPGWNRQQMEQVIATGVNTPVKLATEVPVYFVYISAWGMPDGIV 122

Query: 404 QFRDDIYGLD 413
           QFRDDIY +D
Sbjct: 123 QFRDDIYQMD 132


>gi|152993980|ref|YP_001359701.1| hypothetical protein SUN_2408 [Sulfurovum sp. NBC37-1]
 gi|151425841|dbj|BAF73344.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 558

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/346 (34%), Positives = 185/346 (53%), Gaps = 12/346 (3%)

Query: 85  YQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS--KGLSVAFDAYVESA 141
           Y  I   GGWP + I+  L  G+ + +V  LRERL+I+GD  P      S  +D  ++ A
Sbjct: 212 YIAIKENGGWPTVNIKGVLRPGHRNPAVPDLRERLLITGDYIPCDESDESDLYDNCLKKA 271

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           V  FQ R+GL   G++  +TL+A+N  VD RI  +++NL RIK  L ++   R++++NIP
Sbjct: 272 VIRFQKRNGLSAKGVIGKNTLKALNQTVDERITIIKINLDRIK-WLHERPDNRHIIINIP 330

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              L    NGK+ +   VIVG+    TPI  +R+  ++ NPYW +P+SIIQK+M+  L +
Sbjct: 331 DYRLYYEVNGKLKMTMKVIVGKRKNPTPIFSNRVKSVVLNPYWNVPKSIIQKEMIPKLLR 390

Query: 262 DPQYLKDNNIHMIDEKGKE---VFVEEVDWN----SPEPPNFIFRQDPGKINAMASTKIE 314
           +P  +    I +    GK+   V    V+W     S   P + F Q PG  NA+   K  
Sbjct: 391 NPHAMAGQGIDIYTGWGKDAKKVSGGSVNWAQYRYSKTVP-YRFAQRPGNRNALGRIKFL 449

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           F ++ + YMHDTP   LF    R  + GC+R+     +   +    P+       +++K+
Sbjct: 450 FPNQFHVYMHDTPTKYLFKRDKRSYSHGCIRLEKPKLMMETIASFNPSLELDKAYKILKS 509

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +K T   L   +P+  VY++AW   D  +QFRDD+Y  D + +  +
Sbjct: 510 KKNTYFSLENTIPIDVVYLTAWVDYDGKLQFRDDVYKYDELMIASV 555


>gi|99081059|ref|YP_613213.1| peptidoglycan binding domain-containing protein [Ruegeria sp.
           TM1040]
 gi|99037339|gb|ABF63951.1| Peptidoglycan-binding domain 1 [Ruegeria sp. TM1040]
          Length = 540

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 204/396 (51%), Gaps = 17/396 (4%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLA--RVDMGIDSDIPIISKETIAQTEKAI 82
            L++ P+    +DE I    H +   RF   +A  R    +   +P  S+      EK  
Sbjct: 136 GLIDTPVR---IDEGIVREKHKVDATRFLEGIATDRPAAFLQDLVPTSSQYRALLREKMR 192

Query: 83  AFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
              + +L  GGW   +P+R +  G++  SV  LR RL+  G L P+   S  +D  VE A
Sbjct: 193 --LEALLQAGGWGATVPVRKIEPGDTGQSVLALRNRLVSMGYLAPTATRS--YDLDVEDA 248

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           V+ FQ  HGL+  G+    TL+ +N PV  RI+ + V + R ++ L  + GLR++LVN+ 
Sbjct: 249 VRRFQSEHGLEVDGVAGEGTLKELNRPVSDRIKSVLVAMER-ERWLTPERGLRHILVNLT 307

Query: 202 AASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
             S + ++ G++   +  ++G  + DR+TP     ++ ++ NP W +PRSII K+ +  L
Sbjct: 308 DFSAKIMDEGEISFETRSVIGSTKSDRRTPEFSDEMDHMVINPSWYVPRSIITKEYLPKL 367

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYS 317
           + +P     + I + D +G+ V    VD++     +F F  RQ P   NA+   K  F +
Sbjct: 368 KNNPN--AHSYIEITDNRGRVVNRNNVDFSQFTARSFPFAMRQPPSSRNALGLVKFMFPN 425

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
           + N Y+HDTP+  LF   VR  + GCVR+    +    LL       + +   V+ + K 
Sbjct: 426 KYNIYLHDTPQKHLFGREVRAFSHGCVRLHQPFEFAYELLTPQTENPKDYFHRVLNSGKE 485

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           T V L T+VPVH +Y +A+  +D   +FR D+YG D
Sbjct: 486 TKVPLETKVPVHLIYRTAFVSQDGRAEFRRDVYGRD 521


>gi|83942461|ref|ZP_00954922.1| peptidoglycan binding protein, putative [Sulfitobacter sp. EE-36]
 gi|83846554|gb|EAP84430.1| peptidoglycan binding protein, putative [Sulfitobacter sp. EE-36]
          Length = 528

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 182/334 (54%), Gaps = 10/334 (2%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + +L++GGW P +P   L  G     V  LR RL+  G L  S  ++  +DA ++ AV+ 
Sbjct: 182 EHLLTQGGWGPAVPASSLKPGAQGTQVVALRNRLMSMGYLKRSNVMT--YDATLQEAVRS 239

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL+  G+  S T+  +N  V+ R++ + V + R ++ L ++ G R+VLVNIPA +
Sbjct: 240 FQKDHGLNEDGVAGSGTMAEINKSVETRLQSVIVAMER-ERWLNKERGARHVLVNIPAFT 298

Query: 205 LEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              V+NG+V   +  +VG  + DR TP     +  I+ NP W +PRSI+ K+ +  ++++
Sbjct: 299 ASVVDNGQVTFETRSVVGANQSDRLTPEFSDVMEYIVINPTWTVPRSIVTKEYLPSMQRN 358

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P      +I +ID +G+ +    V+++      F +  RQ PG+ NA+   K  F ++ N
Sbjct: 359 PN--AAGHIDLIDNRGRIISRGSVNFSRYTARTFPYGMRQKPGRTNALGLVKFIFPNKYN 416

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF+  VR  + GCVR+ +  D    LL         + +  + T + T V
Sbjct: 417 IYLHDTPSKSLFDRDVRAFSHGCVRLADPFDFAYTLLAPQAADPVAYFKRQLATGRETFV 476

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L TEVPVH +Y +A++      Q+R DIYG D 
Sbjct: 477 HLDTEVPVHIIYRTAFTTPRGHTQYRADIYGRDG 510


>gi|83953680|ref|ZP_00962401.1| peptidoglycan binding protein, putative [Sulfitobacter sp.
           NAS-14.1]
 gi|83841625|gb|EAP80794.1| peptidoglycan binding protein, putative [Sulfitobacter sp.
           NAS-14.1]
          Length = 528

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 182/334 (54%), Gaps = 10/334 (2%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + +L++GGW P +P   L  G     V  LR RL+  G L  S  ++  +DA ++ AV+ 
Sbjct: 182 EHLLTQGGWGPAVPASSLKPGAQGTQVVALRNRLMSMGYLKRSNVMT--YDATLQEAVRS 239

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL+  G+  S T+  +N  V+ R++ + V + R ++ L ++ G R+VLVNIPA +
Sbjct: 240 FQKDHGLNEDGVAGSGTMAEINKSVETRLQSVIVAMER-ERWLNKERGARHVLVNIPAFT 298

Query: 205 LEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              V+NG+V   +  +VG  + DR TP     +  I+ NP W +PRSI+ K+ +  ++++
Sbjct: 299 ASVVDNGQVTFETRSVVGANQSDRLTPEFSDVMEYIVINPTWTVPRSIVTKEYLPSMQRN 358

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P      +I +ID +G+ +    V+++      F +  RQ PG+ NA+   K  F ++ N
Sbjct: 359 PN--AAGHIDLIDNRGRIISRGSVNFSRYTARTFPYGMRQKPGQTNALGLVKFIFPNKYN 416

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF+  VR  + GCVR+ +  D    LL         + +  + T + T V
Sbjct: 417 IYLHDTPSKSLFDRDVRAFSHGCVRLADPFDFAYTLLAPQAADPVAYFKRQLATGRETFV 476

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L TEVPVH +Y +A++      Q+R DIYG D 
Sbjct: 477 HLDTEVPVHIIYRTAFTTPRGHTQYRADIYGRDG 510


>gi|259419164|ref|ZP_05743081.1| peptidoglycan-binding domain 1 [Silicibacter sp. TrichCH4B]
 gi|259345386|gb|EEW57240.1| peptidoglycan-binding domain 1 [Silicibacter sp. TrichCH4B]
          Length = 540

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 183/333 (54%), Gaps = 10/333 (3%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + +++ GGW   +P+R +  G+S  +V  LR+RL+  G L P+   +  +D  +E AV+ 
Sbjct: 194 ETLMNAGGWGATVPVRKMEPGDSGPNVIALRDRLVSMGYLQPTA--TRTYDLSLEDAVRR 251

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL+  G+    TL  +N PV  RI+ + V + R ++ L  + G R++LVN+   S
Sbjct: 252 FQGEHGLEVDGVAGEGTLTEINRPVTDRIKSVLVAMER-ERWLTPERGPRHILVNLTDFS 310

Query: 205 LEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            + V++G++   +  ++G  R DR+TP     ++ ++ NP W +PRSI+ K+ +  L+ +
Sbjct: 311 AKIVDDGEISFETRSVIGSNRSDRRTPEFSDEMDHMVINPSWYVPRSIVTKEYLPKLKNN 370

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P     + I + D +G+ V    VD++     +F F  RQ P   NA+   K  F ++ N
Sbjct: 371 PN--AHSYIEITDNRGRVVNRNSVDFSQFTARSFPFAMRQPPSSRNALGLVKFMFPNKYN 428

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP+  LF   VR  + GC+R++   D    LL       + +   V+ + K T V
Sbjct: 429 IYLHDTPQKSLFGREVRAYSHGCIRLQKPFDFAYALLAPQTENPKDYFHRVLNSGKETKV 488

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            L T+VPVH +Y +A+  +D   +FR DIYG D
Sbjct: 489 SLETKVPVHLIYRTAFVSQDGRAEFRRDIYGRD 521


>gi|260433724|ref|ZP_05787695.1| peptidoglycan-binding domain 1 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417552|gb|EEX10811.1| peptidoglycan-binding domain 1 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 535

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 177/333 (53%), Gaps = 10/333 (3%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Q+++  GGW P +P      G S   V +LR+RL+  G L P+   S  +D+ +E+AV+ 
Sbjct: 189 QELMRHGGWGPTVPKGKYEPGASGAGVLKLRDRLVAMGFLKPTA--SPEYDSAMEAAVRA 246

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL+P G+    T+  +N     R++ + V + R ++ L    G R+VLVN    S
Sbjct: 247 FQRAHGLEPDGVAGEGTIAEINRSPTDRLKAVMVAMER-ERWLPADRGQRHVLVNQADFS 305

Query: 205 LEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            + V++G V   +  ++G+   DR++P     +  ++ NP W +PRSII K+ +  LR +
Sbjct: 306 AKIVDDGNVTFETRAVIGKNTHDRRSPEFSDEMEHMVINPSWYVPRSIITKEYLPKLRAN 365

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P  ++  ++ + D +G++V    VD+N     +F F  RQ PG+ NA+   K  F ++ N
Sbjct: 366 PNAVR--HLEITDSRGRQVNRAAVDFNQFSARSFPFAMRQPPGQSNALGLVKFMFPNKYN 423

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP+  LF   VR  + GC+R+    +    LL       +     ++ T K T V
Sbjct: 424 IYLHDTPQKSLFAREVRAFSHGCIRLAQPFEFAYALLAPQEEDPKAFFHRILNTGKETKV 483

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            L   VPVH +Y +A+      +Q+R D+YG D
Sbjct: 484 DLEKPVPVHLIYRTAYIGPKGDVQYRRDVYGRD 516


>gi|237807403|ref|YP_002891843.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
 gi|237499664|gb|ACQ92257.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
          Length = 514

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 192/388 (49%), Gaps = 22/388 (5%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS------RGG 93
            N S  +     +D  L R D   DS I     +   QTE  +   + +LS      +  
Sbjct: 119 FNPSTSATGRHAYDELLQRTDP--DSAI----NKLRPQTENYLTNRRVLLSLLSESRKAP 172

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLD-----PSKGLSVAFDAYVESAVKLFQMR 148
           WP LP   +  G+S  ++  +R  L+ SGDL      P +     +D     AV+ FQ R
Sbjct: 173 WPALPALKVRPGDSHDALPVIRNILLRSGDLQANTLTPQQMQLTTYDVQTVQAVEHFQQR 232

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGLD  G++   TL  + +P  +R   L  +++R   L +     RYVLVNIP   L  +
Sbjct: 233 HGLDADGVIGRRTLNWLRLPPQVRAVILARSILR-SDLPQNMSSRRYVLVNIPEFRLRVL 291

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           +  +    S VIVG++ RQTPIL S I+ I+ NP W +P SI+QKD++  L +D  +L  
Sbjct: 292 DKKQEIFSSRVIVGQIKRQTPILSSEISSIVVNPAWHVPASILQKDLVPKLAKDKHFLDK 351

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDT 326
               ++D +G  V    + W+  E  NF +  RQ PG  NA+   K    + +  Y+H T
Sbjct: 352 GQFELVDSQGITVDPAAMVWDGTE-ENFPYQLRQKPGDHNALGRYKFYLPNNDAIYLHST 410

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
             P  F   +R  +SGCVRV    D    LLKD+  W+   +++++K   T  + +   V
Sbjct: 411 SSPGYFKRDLRALSSGCVRVEEADDFARLLLKDS-KWNINKLDQMLKEDTTKWLSMTDPV 469

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           PV+ VY  +W  K   +QFRDDIY  ++
Sbjct: 470 PVYTVYWRSWVDKQGQLQFRDDIYQFED 497


>gi|83647078|ref|YP_435513.1| hypothetical protein HCH_04383 [Hahella chejuensis KCTC 2396]
 gi|83635121|gb|ABC31088.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 560

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 174/336 (51%), Gaps = 14/336 (4%)

Query: 90  SRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDL-----DPSKGL-SVAFDAYVESAV 142
           ++GGWP +   P L  G S   V  LR RLI SGD+     D S+G     FD  +  AV
Sbjct: 205 AQGGWPMVSYGPTLRPGQSDSRVIELRRRLIASGDMERPVIDTSEGDDETLFDEGLVKAV 264

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           + FQ RHGL P  +V   TL  +N P+  RI Q++ NL R ++     +G RYV+VNI  
Sbjct: 265 RFFQERHGLKPDAIVGKETLAMLNTPISERIEQVRSNLER-RRWTPTNLGDRYVVVNIAD 323

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L+ V++G+  L   V+VG+  R+TP     +  ++ NP W +P  I ++DM+    +D
Sbjct: 324 YRLDLVDHGRTELSMRVVVGKPYRRTPAFSGLMTYLVVNPLWEVPTQIAEEDMLERFIED 383

Query: 263 PQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYS 317
           P+++      +    G+E      E ++W   +   F +R  Q  G +NA+   K  F +
Sbjct: 384 PEFINKMGFRVYKGWGREEAALDPETINWEEVKGGKFPYRLQQAAGPMNALGRIKFMFPN 443

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
             N Y+HDTP   LF    R  +SGC+R+   ++L   L+      +   +++++ + + 
Sbjct: 444 EFNVYLHDTPSRSLFYKSQRAFSSGCIRLERPLELAAALIGSKRK-TGIELDKILASGEP 502

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           T ++L   VPVH  Y +AW     + QFR D+YG D
Sbjct: 503 TTLRLPRPVPVHLQYWTAWMDDSGVAQFRKDVYGRD 538


>gi|209965708|ref|YP_002298623.1| peptidoglycan binding domain protein, putative [Rhodospirillum
           centenum SW]
 gi|209959174|gb|ACI99810.1| peptidoglycan binding domain protein, putative [Rhodospirillum
           centenum SW]
          Length = 596

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 174/343 (50%), Gaps = 11/343 (3%)

Query: 81  AIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA---FD 135
           A+A Y+ + + GGW  +P     L  G S   V  LR RL  +G+L P+         +D
Sbjct: 214 ALAAYRTLAAAGGWLAVPTGGETLKPGQSDPRVPALRARLAATGELSPAAPAPADPQFYD 273

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +E+AV+LFQ R+GL+P G V   ++ A+NV    R+ Q+++N+ R +  L   +G  Y
Sbjct: 274 PALEAAVRLFQSRNGLEPDGAVGRQSVAALNVTAQQRVTQIEINMERWR-WLPADLGPSY 332

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++VN+ A  L   E  +    + ++VG    +TP+    +  +  NPYW +P SI + ++
Sbjct: 333 LIVNLAAFELAVFEGDRPVHTARIVVGAPFTRTPVFSESMTYLELNPYWNVPPSIARDEI 392

Query: 256 MALLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
               R+DP YL      ++    E    V    VDW       +  RQ PG  N++   K
Sbjct: 393 FPKARKDPGYLARRGYELLSDWSETAVPVDPATVDWRHGNLNRYKVRQKPGDTNSLGRIK 452

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT--WSRYHIEE 370
             F +R N Y+HDTP   LF    R  + GC+RV N +DL   +L+ T T  W R  ++ 
Sbjct: 453 FMFPNRFNVYLHDTPSKRLFERANRTFSHGCMRVENPLDLAETVLRLTGTTGWDRARLDA 512

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            +   +   V+L   +PVH  Y++A+  +D  + FR DIYG D
Sbjct: 513 AIAGDQRQVVRLRRPLPVHVTYVTAFVEEDGTVAFRPDIYGRD 555


>gi|152993866|ref|YP_001359587.1| hypothetical protein SUN_2290 [Sulfurovum sp. NBC37-1]
 gi|151425727|dbj|BAF73230.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 566

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 179/320 (55%), Gaps = 8/320 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL LG+ S  V+ +++RL ISGD   +  +   FD  +E AVK +Q R+ L  +G VD +
Sbjct: 220 PLKLGDWSPRVKEVKKRLQISGDYPKNAPVDWKFDRRLEQAVKTYQKRYLLKITGQVDKT 279

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T+  +N P    I+ + VNL + K L  +     Y+ VN+P  +L    NG++  ++ ++
Sbjct: 280 TMYYLNQPASKNIKAIIVNLDKTK-LYPKHFENEYIAVNVPDFNLRYYRNGEMIFKTGIV 338

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VGR+DR TPI   +I  ++ NP W IP ++I++D++ +LR++P YL++NNIH+     KE
Sbjct: 339 VGRIDRPTPIFSDKIEYMVINPTWTIPDNLIKRDLIHVLRENPAYLEENNIHVF-SGNKE 397

Query: 281 VFVEEVDWNSPEPPN----FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + V +   +  E  +    + F Q PG  NA+   K  F ++ + Y+HDT    L     
Sbjct: 398 ITVTQEMLDPYEHSDKKVPYRFVQYPGDSNALGRIKFMFPNKYSVYLHDTDNKSLLTRRY 457

Query: 337 RFETSGCVRVRNIIDL-DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
           +  +SGC+RV    DL D+ L      ++R  I+ ++ T K   ++L   +PVH +Y + 
Sbjct: 458 KIYSSGCMRVDKPFDLMDILLKHAKGRYTREDIDAIIATDKPKTIRLKKAIPVHILYFTV 517

Query: 396 WSPKDSIIQFRDDIYGLDNV 415
           +  +D +  F++DIY  D +
Sbjct: 518 FE-EDGLAYFKNDIYLYDKI 536


>gi|119471875|ref|ZP_01614183.1| hypothetical protein ATW7_04554 [Alteromonadales bacterium TW-7]
 gi|119445248|gb|EAW26538.1| hypothetical protein ATW7_04554 [Alteromonadales bacterium TW-7]
          Length = 453

 Score =  183 bits (465), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/355 (33%), Positives = 182/355 (51%), Gaps = 16/355 (4%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDP--- 126
           S + I +TEKAI +YQ+I++RGG+  LP   L  LG++S +V  L  RL    DL     
Sbjct: 83  SAQLIKRTEKAINWYQEIVNRGGFISLPASELLELGSNSKAVSLLAMRLFQEQDLRTNVC 142

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           SK   + FD ++E AVK FQ RHGL+  G V  +T   +N+  + ++ +L++N  RI   
Sbjct: 143 SKAPCI-FDKHIERAVKQFQHRHGLNVDGRVGKNTFAKLNISAEQKLNKLKLNFYRITNF 201

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                  +YV VNIP   L  V+ G V L++ VIVG+   +TP     I + + NP W I
Sbjct: 202 AGSS-DEQYVYVNIPEYQLRYVKVGDVKLQNNVIVGKPSWETPAFSDEIEKFVVNPEWRI 260

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSPEPPNF--IFRQD 301
           P SI  +++   + +DP YL  NNI +        + V    +DW+S +P  F     + 
Sbjct: 261 PISIATREIAPKVAEDPDYLVKNNIEIRKNSYIDSQTVNPNNIDWDSIKPYQFDHFLVKR 320

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
            G+ N +   K  F +    Y+HDTP    F+   R  + GC+R+ +   L   ++K   
Sbjct: 321 AGEKNPLGEVKYLFPNPEAIYVHDTPAKQRFSQTRRALSHGCIRIEDPFSLAQEIIKHQG 380

Query: 362 TWSRYHIEEVVKTR---KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               Y +E+V   R    T    L   +P+H VY +AW  ++ ++ FRDDIY  D
Sbjct: 381 --EEYALEQVNDARSENSTQTFYLDEPLPIHLVYWTAWVDENKLVNFRDDIYKRD 433


>gi|332558206|ref|ZP_08412528.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides WS8N]
 gi|332275918|gb|EGJ21233.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides WS8N]
          Length = 536

 Score =  182 bits (462), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 180/347 (51%), Gaps = 16/347 (4%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           +  ++ GGW   +P   L  G +      LR+RL+  G L   +  + ++DA V +AV+ 
Sbjct: 190 EATVAAGGWGAAVPAGKLKPGATGPGFLALRDRLMAMGYL--GRSTAASYDAEVAAAVRS 247

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL P G+    T+ A+NV  + R++ + V L R ++ L    G R++ VN+   S
Sbjct: 248 FQTDHGLSPDGVAGEGTIAALNVAPEARLKSILVALER-ERWLSIDRGERHIWVNLADFS 306

Query: 205 LEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              ++NGKV   +  ++G+   D++TP     +  ++ NP W +PRSI  K+ + LL+++
Sbjct: 307 TRLIDNGKVTFETRSVIGKDSPDQRTPEFSDEMEYMVINPSWHVPRSITTKEYLPLLQRN 366

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P      ++ +ID +G+EV    V++N+    NF F  RQ P   NA+   K  F ++ N
Sbjct: 367 PN--AAGHLKLIDSRGREVSRGAVNFNAYNARNFPFSMRQPPSDGNALGLVKFMFPNQWN 424

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF+  VR  + GC+R+    D    LL           +  + + + + V
Sbjct: 425 IYLHDTPSKSLFDREVRAFSHGCIRLGRPFDFAYALLAAQTEDPEGLFQSHLSSGRESVV 484

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV------HVGIIP 421
           +L   VPVH VY +AW+     + +RDDIYG D V        G++P
Sbjct: 485 RLEKPVPVHLVYFTAWAGPTGQMNYRDDIYGRDGVIFDALSEAGVVP 531


>gi|126666378|ref|ZP_01737357.1| hypothetical protein MELB17_12356 [Marinobacter sp. ELB17]
 gi|126629179|gb|EAZ99797.1| hypothetical protein MELB17_12356 [Marinobacter sp. ELB17]
          Length = 566

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 182/347 (52%), Gaps = 20/347 (5%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHL--GNSSVSVQRLRERLIISGDLDPSKGLS------- 131
            +A+Y++I   GGW +LP RP  L  G+    V  LR+RL + G L     +S       
Sbjct: 184 GLAYYRNIQLEGGWQQLPQRPQSLRPGDVDADVPLLRQRLAMIGGLGLQNAMSAVQPEEQ 243

Query: 132 ----VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
               + +D  +  AV+LFQ  H L+  G+V   T  A NV VD RI Q++ NL R + LL
Sbjct: 244 TATLLEYDEAMVGAVRLFQRHHLLEADGIVGQQTRNAFNVSVDERINQIRANLERARWLL 303

Query: 188 EQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             +    ++LV+I    +     NG++  RS ++VG+  R TP L S I  +  NP W +
Sbjct: 304 HGEASA-FILVDIAGYRISYFRPNGEI-WRSRIVVGQPYRSTPSLRSEITHLTVNPTWTV 361

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P +I ++D +  +R D  YL   N+ ++D +G+ +  +++DW +P   + + RQ PG +N
Sbjct: 362 PPTIYREDSLPKIRDDIGYLYRQNMSVLDLRGQRLDPQQIDWWNPG--SIMLRQGPGPMN 419

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+    + F + +  Y+HDTP   LF    R  +SGC+RV+ I +L   L  DT T +  
Sbjct: 420 ALGQLVLRFPNNHLVYLHDTPAQALFGRQQRAFSSGCIRVQGITELAQLLFDDTDTAA-- 477

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            ++ ++ T  T  +KL   +PV   Y +    +D  + FR DIY  D
Sbjct: 478 DVKALIATGDTRNIKLRRTMPVILHYWTVHPGEDGELVFRPDIYQQD 524


>gi|146299527|ref|YP_001194118.1| peptidoglycan binding domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146153945|gb|ABQ04799.1| Peptidoglycan-binding domain 1 protein [Flavobacterium johnsoniae
           UW101]
          Length = 526

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 177/316 (56%), Gaps = 4/316 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ + L +++ ++  ++++L+   D+     L+  +D     AVK FQ RHGL   G++ 
Sbjct: 207 VKKITLKDTNNALINIKKKLLFWKDMSGKDSLTDKYDEKTFEAVKKFQARHGLADDGVIG 266

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             T+ A+N   + R +Q+  NL R +     ++   Y ++NIP  SL  VEN    L   
Sbjct: 267 IGTISALNYSKERRKQQIIANLERWR-WYPTELAENYFIINIPDYSLHVVENQDTTLVRN 325

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           ++VG   R+TPI+ S +  ++FNP W +P +I+++D++  ++++  YL   NI + D  G
Sbjct: 326 IVVGTSSRKTPIITSVLKTVVFNPTWTVPPTILKEDVVPAMKRNRNYLAKKNITIYDTSG 385

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           K   VE   WN  +P N+ + Q PG  N++   KI F + ++ Y+HDT     F    R 
Sbjct: 386 K--VVEPSAWNENKPNNYRYVQSPGYNNSLGLMKILFPNHHSVYLHDTNHRNYFVRNNRS 443

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVRV N ++L   +L D+  +S+  I+ ++ ++KT   K+  +  ++  Y +AWS 
Sbjct: 444 LSSGCVRVENPLELAEHILNDSIRFSKVKIDTIIASKKTMSFKITKKYALYQWYWTAWSK 503

Query: 399 KDSIIQFRDDIYGLDN 414
           K+ +I FR DIY LD+
Sbjct: 504 KNQLI-FRADIYNLDS 518


>gi|77463328|ref|YP_352832.1| hypothetical protein RSP_2774 [Rhodobacter sphaeroides 2.4.1]
 gi|126462184|ref|YP_001043298.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|77387746|gb|ABA78931.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
 gi|126103848|gb|ABN76526.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 546

 Score =  182 bits (462), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 180/347 (51%), Gaps = 16/347 (4%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           +  ++ GGW   +P   L  G +      LR+RL+  G L   +  + ++DA V +AV+ 
Sbjct: 200 EATVAAGGWGAAVPAGKLKPGATGPGFLALRDRLMAMGYL--GRSTAASYDAEVAAAVRS 257

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL P G+    T+ A+NV  + R++ + V L R ++ L    G R++ VN+   S
Sbjct: 258 FQTDHGLSPDGVAGEGTIAALNVAPEARLKSILVALER-ERWLSIDRGERHIWVNLADFS 316

Query: 205 LEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              ++NGKV   +  ++G+   D++TP     +  ++ NP W +PRSI  K+ + LL+++
Sbjct: 317 TRLIDNGKVTFETRSVIGKDSPDQRTPEFSDEMEYMVINPSWHVPRSITTKEYLPLLQRN 376

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P      ++ +ID +G+EV    V++N+    NF F  RQ P   NA+   K  F ++ N
Sbjct: 377 PN--AAGHLKLIDSRGREVSRGAVNFNAYNARNFPFSMRQPPSDGNALGLVKFMFPNQWN 434

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF+  VR  + GC+R+    D    LL           +  + + + + V
Sbjct: 435 IYLHDTPSKSLFDREVRAFSHGCIRLGRPFDFAYALLAAQTDDPEGLFQSHLSSGRESVV 494

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV------HVGIIP 421
           +L   VPVH VY +AW+     + +RDDIYG D V        G++P
Sbjct: 495 RLEKPVPVHLVYFTAWAGPTGQMNYRDDIYGRDGVIFDALSEAGVVP 541


>gi|221639179|ref|YP_002525441.1| peptidoglycan-binding domain 1 protein [Rhodobacter sphaeroides
           KD131]
 gi|221159960|gb|ACM00940.1| Peptidoglycan-binding domain 1 protein precursor [Rhodobacter
           sphaeroides KD131]
          Length = 518

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 180/347 (51%), Gaps = 16/347 (4%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           +  ++ GGW   +P   L  G +      LR+RL+  G L   +  + ++DA V +AV+ 
Sbjct: 172 EATVAAGGWGAAVPAGKLKPGATGPGFLALRDRLMAMGYL--GRSTAASYDAEVAAAVRS 229

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL P G+    T+ A+NV  + R++ + V L R ++ L    G R++ VN+   S
Sbjct: 230 FQTDHGLSPDGVAGEGTIAALNVAPEARLKSILVALER-ERWLSIDRGERHIWVNLADFS 288

Query: 205 LEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              ++NGKV   +  ++G+   D++TP     +  ++ NP W +PRSI  K+ + LL+++
Sbjct: 289 TRLIDNGKVTFETRSVIGKDSPDQRTPEFSDEMEYMVINPSWHVPRSITTKEYLPLLQRN 348

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P      ++ +ID +G+EV    V++N+    NF F  RQ P   NA+   K  F ++ N
Sbjct: 349 PN--AAGHLKLIDSRGREVSRGAVNFNAYNARNFPFSMRQPPSDGNALGLVKFMFPNQWN 406

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF+  VR  + GC+R+    D    LL           +  + + + + V
Sbjct: 407 IYLHDTPSKSLFDREVRAFSHGCIRLGRPFDFAYALLAAQTDDPEGLFQSHLSSGRESVV 466

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV------HVGIIP 421
           +L   VPVH VY +AW+     + +RDDIYG D V        G++P
Sbjct: 467 RLEKPVPVHLVYFTAWAGPTGQMNYRDDIYGRDGVIFDALSEAGVVP 513


>gi|51244920|ref|YP_064804.1| hypothetical protein DP1068 [Desulfotalea psychrophila LSv54]
 gi|50875957|emb|CAG35797.1| hypothetical protein DP1068 [Desulfotalea psychrophila LSv54]
          Length = 561

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 181/342 (52%), Gaps = 11/342 (3%)

Query: 79  EKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDL--DPSKGLSVAFD 135
           + A+A+Y++    G WP++ +   LH G+    +  +R+RL  +G     P       +D
Sbjct: 209 KTALAYYRNFAKNGDWPKVAMGVNLHPGDREKRIISIRKRLQFAGPFLEAPRDSDLSQYD 268

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +E AV  FQ  HGL   G++  +T++A+N+ +  +I  +++N+MR +      +G RY
Sbjct: 269 LILEEAVLSFQQLHGLQTDGIIGRNTVDALNISIAEKIEIIRLNMMRWR-WQAHDLGKRY 327

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +LVNI + +L+A  +  V L   +IVG  + +TP+  + I  I FNP+W IP SI + +M
Sbjct: 328 LLVNIASFNLKAFRDQDVVLDMPIIVGTEENETPVFSAWIKYIDFNPFWNIPTSIARNEM 387

Query: 256 MALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPPN---FIFRQDPGKINAMA 309
           +  LR++  YL D  I +     +   E+    +DW +  P     +  RQDPG +NA+ 
Sbjct: 388 LPALRKNNYYLIDQRISLFSNWQQSAVELDSTAIDWEAITPSEISAYKLRQDPGPLNALG 447

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD-TPTWSRYHI 368
             K  F +  + YMHDTP   LF+   R  + GC+RV + + L ++LL++ T  W    I
Sbjct: 448 RIKFIFPNSYSVYMHDTPGRHLFSLSKRSFSHGCIRVSDPLSLAIFLLENQTDGWDTEKI 507

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           +E+ +  +   + L   V VH  Y +AW  K   I F  DIY
Sbjct: 508 KEIYEQEERKVIILTLSVAVHITYGTAWVDKGGEIHFSRDIY 549


>gi|254487232|ref|ZP_05100437.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
 gi|214044101|gb|EEB84739.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
          Length = 516

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 178/333 (53%), Gaps = 10/333 (3%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + +L+ GGW P +    L  G    +V  LR RLI  G L  + G+S  +DA +E+AV+ 
Sbjct: 170 EKLLATGGWGPVVSASTLKPGAQGAAVVSLRNRLIRMGYLKRTNGIS--YDATMEAAVRE 227

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL+  G+  S T+  +N  V+ R++ + V + R ++ L ++ G R+VLVNIPA +
Sbjct: 228 FQKDHGLNTDGVAGSGTITELNKSVETRLKSVIVAMER-ERWLNKERGARHVLVNIPAFT 286

Query: 205 LEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              ++NG+V   +  +VG     R TP     +  I+ NP W +PRSI+ K+ +  ++ +
Sbjct: 287 AAIIDNGRVTFETKSVVGATKDGRYTPEFSDTMEYIVINPTWNVPRSIVTKEYLPSMKNN 346

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P      +I +ID  G+ V    V+++S     F F  RQ PG+ NA+   K  F ++ N
Sbjct: 347 PN--AAGHIDLIDRSGRIVPRGAVNFSSYTEQTFPFSMRQRPGRSNALGLVKFIFPNKYN 404

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF   +R  + GCVR+ +  D    LL    +      +  + T + T V
Sbjct: 405 IYLHDTPSKSLFARDMRAFSHGCVRLADPFDFAYTLLAAQTSDPVGFFKSKLATGRETFV 464

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            L  E+PVH +Y +A++      Q+R DIYG D
Sbjct: 465 HLDNELPVHLIYRTAFTTPRGHTQYRADIYGRD 497


>gi|91792858|ref|YP_562509.1| peptidoglycan binding domain-containing protein [Shewanella
           denitrificans OS217]
 gi|91714860|gb|ABE54786.1| Peptidoglycan-binding domain 1 [Shewanella denitrificans OS217]
          Length = 498

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 173/325 (53%), Gaps = 15/325 (4%)

Query: 94  WPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP + P   L   +   S+  +  RL + GD   +    V   A +ES +K FQ RHGL 
Sbjct: 168 WPVIDPQGLLRRNDGHASIPAIAARLSLLGDFHGAHQGYVLTPA-LESGLKAFQRRHGLK 226

Query: 153 PSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
             G++   TL  +N +P++ R R L VN +   +  + ++   Y+LVNIPA  +  V+ G
Sbjct: 227 DDGVIGPKTLSWLNQLPIE-RARLLAVNFVEQSRY-QAQLDDSYLLVNIPAFEMVLVDKG 284

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           ++ L S VIVG+  RQTPI+   I+ ++ NP W +PR ++++D++  +R+D +YL +   
Sbjct: 285 QIVLHSRVIVGKSYRQTPIMSGAISNLVINPTWTVPRRLLRQDVLPHVRKDGRYLAEKQF 344

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            + + +G++  +   +W S     F ++  Q PG+ N++   K  F +  N Y+HDTP P
Sbjct: 345 DVFNYQGQKQLLTAEEWQSLAYTRFPYKLVQRPGEHNSLGRYKFHFNNDKNIYLHDTPTP 404

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWL----LKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
            LF N  R  +SGC+R+  + +L  W     + D  TW R    +     KT    L   
Sbjct: 405 ELFANAERALSSGCIRIEKVAELANWFAVHRVNDKRTWRRLQSSK----HKTQWFSLTHS 460

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIY 410
           +PVH VY +AW  +  + Q+R DIY
Sbjct: 461 LPVHLVYWTAWVDEHHLAQYRSDIY 485


>gi|117920334|ref|YP_869526.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117612666|gb|ABK48120.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. ANA-3]
          Length = 558

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 159/297 (53%), Gaps = 11/297 (3%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           S+ +D  +  A+K FQ +HGL   G++   TL  +N     R + L  N +R ++L  + 
Sbjct: 260 SMPYDDELVRAIKNFQTQHGLQADGVIGKQTLYWLNQSPYARAKLLAKNTLR-QQLFTRT 318

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +   Y+++NIPA  L+ VE GKV L S VIVG+  R TP+L S I+ ++ NP W +PR+I
Sbjct: 319 LPASYLVINIPAFELQFVEAGKVILNSKVIVGKASRPTPLLSSHISSVVLNPQWRVPRTI 378

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAM 308
           +++D+M  +RQD  YL+D    + D  G  V     +W      +F +R  Q PG  NA+
Sbjct: 379 VRRDIMPHIRQDGHYLQDRGFDVYDYDGARVEHSPQEWQELASSHFPYRLVQRPGAKNAL 438

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWS 364
              K  F +  + Y+H T EP LF    R  +SGC+RV  + +L  W    L+KDT  W 
Sbjct: 439 GRYKFHFDNSFSVYLHGTSEPSLFKKTDRALSSGCIRVEKVEELARWFQTHLVKDTRLWD 498

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           +        T ++    L+  +PV+ VY +AW      IQ+R+DIY L+      +P
Sbjct: 499 KL----TPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRNDIYHLEVEFTQAVP 551


>gi|24373669|ref|NP_717712.1| hypothetical protein SO_2109 [Shewanella oneidensis MR-1]
 gi|24348019|gb|AAN55156.1|AE015652_5 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 502

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 175/322 (54%), Gaps = 21/322 (6%)

Query: 105 GNSSVSVQRLRERLIISGDL------DPSKGL----SVAFDAYVESAVKLFQMRHGLDPS 154
           G  S  +  +  RL+I G L      +PS G+     + +   + +A+KLFQ +HGL   
Sbjct: 168 GQQSPLISPIARRLLILGFLPNELRMEPSVGVEANNGMLYGDELVTAIKLFQQQHGLLAD 227

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G++   TL  +N     R + L  N++R + +   ++  RY+LVNIPA  L+ +E+G+V 
Sbjct: 228 GVIGKQTLFWLNQSPRARAKLLARNVLR-QSIFTAQLPARYLLVNIPAFELKLIEDGQVA 286

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           LRS VIVG+  R TP+L S+I+ ++ NP W +PR+II++D++  +RQD  YL +    + 
Sbjct: 287 LRSKVIVGKASRPTPLLASQISSVVMNPEWRVPRTIIKRDILPHIRQDGHYLTEREFDVY 346

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
              G++      +W +    +F ++  Q PG  NA+   K  F +  + Y+H T EP LF
Sbjct: 347 AYDGQQAEHSADEWQALASSHFPYQLVQRPGPKNALGRYKFHFDNSFSVYLHGTSEPSLF 406

Query: 333 NNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
               R  +SGC+RV  + +L +W    L+KD   W + H +    T ++    L+ ++PV
Sbjct: 407 KRTNRALSSGCIRVEKVEELALWFKTHLVKDQRLWDKLHTD----TTQSQWFALSDKLPV 462

Query: 389 HFVYISAWSPKDSIIQFRDDIY 410
             VY + W      +Q+R+DIY
Sbjct: 463 FVVYWTVWLDDAGQVQYRNDIY 484


>gi|294677410|ref|YP_003578025.1| peptidoglycan-binding domain 1 protein [Rhodobacter capsulatus SB
           1003]
 gi|294476230|gb|ADE85618.1| peptidoglycan-binding domain 1 protein [Rhodobacter capsulatus SB
           1003]
          Length = 540

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 181/350 (51%), Gaps = 17/350 (4%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Q  ++ GGW PE+  + L  G+S   V  LR+RLI  G L   + +S  +D  +  AV+ 
Sbjct: 193 QAEIATGGWGPEVAAKRLGPGDSGPGVIALRDRLIRMGYL--RRSVSATYDGDLHRAVQT 250

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           +Q+  G+   G+    TL  +N   + R++ + V L R++ +    +G R++ VN+P  +
Sbjct: 251 YQLDQGIKADGVAGEGTLARINRTPEERMKSILVALERLRWMNGLDLGKRHIWVNLPDFT 310

Query: 205 LEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              V++GK+   +  +VG  + DR+TP     +  ++ NP W +PRSI  K+ + +++++
Sbjct: 311 ARIVDDGKMSFETVTVVGMNQGDRRTPEFSDVMEMMVINPSWSVPRSITVKEYLPMMQRN 370

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P      +I ++D +G+ V  E V++ +    NF F  RQ P   NA+   K  F +  N
Sbjct: 371 PG--AAGHIQLVDSRGRAVARESVNFAAYNARNFPFAMRQPPSNGNALGLVKFLFPNPYN 428

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF   VR  + GC+RV    DL   LL         + + V+KT   T V
Sbjct: 429 IYLHDTPSKSLFQKDVRAFSHGCIRVGRPFDLAYALLAAQEADPEGYFKSVLKTGAETTV 488

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYG--------LDNVHVGIIPL 422
           KL   VPVH VY +A+      I++RDD+YG        LD   V + PL
Sbjct: 489 KLRDPVPVHLVYFTAFPNAQGRIEYRDDVYGRDAALFAALDKAGVALAPL 538


>gi|114332479|ref|YP_748701.1| peptidoglycan binding domain-containing protein [Nitrosomonas
           eutropha C91]
 gi|114309493|gb|ABI60736.1| Peptidoglycan-binding domain 1 protein [Nitrosomonas eutropha C91]
          Length = 561

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 181/332 (54%), Gaps = 16/332 (4%)

Query: 94  WPELP-----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA----FDAYVESAVKL 144
           W  +P     IRP H  ++S+   R R +        P  G+ V+    +D  +E AVK 
Sbjct: 225 WTRIPEETSLIRP-HTRHTSIPQVRQRIQEAYHIFEKPEYGIVVSDSEFYDDQLEIAVKA 283

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ +HGL+  G++  +T  AMN+     ++QL++ L R++  L +K+G RY+LVNI   +
Sbjct: 284 FQRQHGLNADGIIGKNTRRAMNITPGEHVQQLRITLERLR-WLPRKLGDRYILVNIAGFN 342

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L AV+     L   ++VGR  R TP  +S+I  ++ NPYW +P SI +KD++   R +P 
Sbjct: 343 LVAVQENVRVLDMKIVVGRDYRSTPSFNSKITHLVLNPYWNVPASIARKDLLPKQRYNPD 402

Query: 265 YLKDNNIHMIDEKG--KEVFVEEVDWNSPEPP-NFIFRQDPGKINAMASTKIEFYSRNNT 321
           Y     I +  +     E+  + +DW+S      +I RQDPG+ NA+ + K  F +  + 
Sbjct: 403 YFASEGIRVFSDYKYESELNPDFIDWHSTSRSLPYILRQDPGRRNALGTIKFMFPNPFSI 462

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
           Y+HDTP   LF   +R  +SGC+R+   + L  ++L    ++ +  I E + + KT  V 
Sbjct: 463 YLHDTPSKYLFQKDIRTFSSGCIRLEKPLQLAEFVLGQ--SFEQADIAEKISSGKTQTVH 520

Query: 382 LATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L  ++PV+ +Y++AWS +   + F  D+YG D
Sbjct: 521 LPEKIPVYLLYLTAWSDEQGEVYFSSDVYGRD 552


>gi|119774749|ref|YP_927489.1| peptidoglycan binding domain-containing protein [Shewanella
           amazonensis SB2B]
 gi|119767249|gb|ABL99819.1| peptidoglycan-binding domain 1 [Shewanella amazonensis SB2B]
          Length = 472

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/326 (33%), Positives = 174/326 (53%), Gaps = 10/326 (3%)

Query: 96  ELPIRPLHL------GNSSVSVQRLRERLIISGDLDPSKGLSVA-FDAYVESAVKLFQMR 148
           E P +P+ L      G+S   V  + +RL + GD++   G +++ +D  V   VK FQ R
Sbjct: 138 EQPWQPIVLNGLLRPGDSHTEVVAIAKRLWLLGDMETEPGYALSRYDDEVAQGVKAFQHR 197

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL    ++   TL  +N+  D R  +L  + + ++    Q +   YVLVNIPA  LE V
Sbjct: 198 HGLKQDAVIGPKTLYWLNLAPDTRAARLARDYL-LQSRERQTLPSTYVLVNIPAFDLELV 256

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           ++G+  + S VIVG+  R+TP + S I+ ++ NP W +PR +++ D++  +R+D  YL  
Sbjct: 257 DDGEALMHSRVIVGKPSRKTPFIQSEISAVVVNPSWRVPRRLMRLDVLPKVRKDGSYLSR 316

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNF--IFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
               +   +G+EV   +  + S     F  +  Q PG  NA+   K+ F + +N Y+HDT
Sbjct: 317 KGFIVWSREGEEVKETDDFFQSAAAGKFPYLLEQRPGPDNALGRFKLHFANEDNVYLHDT 376

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P+  LF+  +R  +SGCVRV  I +L  WL        R   + +   + T    L   +
Sbjct: 377 PDKHLFDEPMRALSSGCVRVEKINELSAWLANGRLADPRRWQQTLQTPQTTRWFTLKERL 436

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGL 412
           PVHFVY ++W   +   QFR+DIYG+
Sbjct: 437 PVHFVYWTSWVDAEGKAQFREDIYGI 462


>gi|146277082|ref|YP_001167241.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555323|gb|ABP69936.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 544

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 16/344 (4%)

Query: 89  LSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           ++ GGW  ++P   L  G +   V  LR RL++ G L   +    ++DA +E+AV+ FQ+
Sbjct: 201 IAAGGWGLQVPAGKLRPGATGEGVLALRNRLMVMGYL--GRSTVASYDASIEAAVRAFQI 258

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
            HGL P G+V   TL AMNV  + R+  + V L R ++ L    G R++ VN+   S   
Sbjct: 259 DHGLTPDGVVGEGTLAAMNVSPETRLESVLVALER-ERWLAIDRGERHIWVNLTDFSARI 317

Query: 208 VENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
           VE GKV   +  ++G+   D+++P     +  ++ NP W +PRSI  K+ + LL+++P  
Sbjct: 318 VEGGKVTFETRSVIGKDSPDQRSPEFSDEMEYMVINPSWHVPRSITTKEYLPLLQRNPNA 377

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYM 323
               ++ +ID +G+ V    V++N+    NF +  RQ P   NA+   K  F +  N Y+
Sbjct: 378 AA--HLKLIDSRGQVVNRGSVNFNAYNARNFPYSMRQPPSDGNALGLVKFMFPNPWNIYL 435

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF+  VR  + GC+R+    D    LL           +  ++T K T V+L 
Sbjct: 436 HDTPSKSLFDREVRAFSHGCIRLAQPFDFAYALLARQSDDPEGLFQSHLRTGKETVVRLE 495

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV------HVGIIP 421
             VPVH VY +AW+     + +R DIYG D V        G++P
Sbjct: 496 EPVPVHLVYSTAWAGPTGRMSYRQDIYGRDGVILEALRAAGVVP 539


>gi|188591281|ref|YP_001795881.1| hypothetical protein RALTA_A0493 [Cupriavidus taiwanensis LMG
           19424]
 gi|170938175|emb|CAP63161.1| conserved hypothetical protein, COG2989; putative exported protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 529

 Score =  179 bits (454), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 175/346 (50%), Gaps = 12/346 (3%)

Query: 80  KAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +A+A Y+DI  +  W    P LP   L  G        L  RL+  GDL         ++
Sbjct: 161 QALARYRDIARQPVWQQPLPPLPASKLTPGQPWAGAAALTARLVALGDLPAGTQPPARYE 220

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +   VK FQ RHGL   G++ ++TL  +N+P+  R+RQ+++ + R++       G R 
Sbjct: 221 GALVDGVKAFQSRHGLQADGVIGAATLAQLNLPIADRVRQIELTMERLR--WTPLDGPRM 278

Query: 196 VLVNIPAASLEAVE--NGK--VGLRSTVIVGR-VDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++VN+P   L A E  +GK  + L   VIVG+ +D +TP+    +  I F+PYW IP SI
Sbjct: 279 IVVNVPEFMLRAYEIRDGKLDIKLEMKVIVGKALDTRTPLFEEDMRYIEFSPYWNIPPSI 338

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINAMA 309
            +++ +  LR+DP Y     +  +   GK V  + E + ++    +   RQ PG +NA+ 
Sbjct: 339 ARRETVPRLRRDPGYFSRQGLEFVGGDGKAVTTLSEENLDAVLNGSLRIRQRPGPLNALG 398

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +  N Y+H TP P LF    R  + GC+RV   + L  ++L D P W+   I 
Sbjct: 399 DIKFVFPNNENIYLHHTPSPQLFKRDRRDFSHGCIRVEAPVALAQFVLHDMPDWNEARIR 458

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           E +   K+  V+L   +PV   Y +  +  D  + F+ DIYG D +
Sbjct: 459 EAMARGKSNTVRLQQPLPVVLAYGTVIARADGRVSFQPDIYGHDKL 504


>gi|332532859|ref|ZP_08408732.1| hypothetical protein PH505_aj00520 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037705|gb|EGI74156.1| hypothetical protein PH505_aj00520 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 441

 Score =  179 bits (453), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 177/352 (50%), Gaps = 10/352 (2%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPS-- 127
           S + I +TEKAI +YQ+I+++GG+  L     L LG+++  V  L +RL    DL  +  
Sbjct: 71  SAQLIERTEKAINWYQEIVNKGGFTHLYNDELLELGSNNKQVSLLAQRLYQERDLKTNVC 130

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                 FD  +E AVK FQ RHGL   G V   T  ++NVP   ++ +L++N  RI    
Sbjct: 131 DEAICTFDKDIEQAVKQFQSRHGLKVDGRVGKRTFASLNVPAQQKLDKLKLNFYRITNFA 190

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                 +YV VNIP  SL  V+ G V L++ VIVG+   +TP     I + + NP W IP
Sbjct: 191 GAS-DEQYVYVNIPEYSLRFVKAGDVKLKNNVIVGKPSWETPAFSDEIEKFVVNPEWRIP 249

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSPEPPNF--IFRQDP 302
            SI  K++   + +DP YL  NNI +        + V    +DW+S +P  F     +  
Sbjct: 250 TSIATKEIAPKVAEDPDYLVKNNIEIRKNSYLDSQTVNPSNIDWDSIKPYQFDHFLVKRA 309

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK-DTP 361
           G+ N +   K  F +    Y+HDTP    F+   R  + GC+R+     L   ++K +  
Sbjct: 310 GEENPLGEVKYLFPNAEAIYVHDTPAKHRFSQANRALSHGCIRIEKPFSLAREIIKYEGE 369

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             +  +++  +    T    L   +P+H VY +AW  ++ ++ FRDDIY  D
Sbjct: 370 AQTLNNMDTALAQNSTQTFYLDEPLPIHLVYWTAWVDENKLVNFRDDIYQRD 421


>gi|320355292|ref|YP_004196631.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM
           2032]
 gi|320123794|gb|ADW19340.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM
           2032]
          Length = 636

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 187/341 (54%), Gaps = 8/341 (2%)

Query: 79  EKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-FDA 136
           ++A+  Y+ I S+GGWP++P+ P L  G     V  +R RL I+     + G +   +D+
Sbjct: 241 KEALIRYKQIASKGGWPQVPMGPSLRPGAHDDRVPAIRRRLAITDHYHATGGGNAKQYDS 300

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
           ++ +AVK FQ RH L+P G+V  ST+ AMNV V  RI+QL+VNL R + ++   M    +
Sbjct: 301 HLVAAVKAFQARHHLEPDGVVGKSTVMAMNVTVAERIKQLRVNLERTRWVI-HDMPSSNL 359

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +V+I    L+   +      S V+VG+   QTPI  S I  I+ NP W I   I++ + +
Sbjct: 360 IVDIAGFMLQYYHDNAPVWTSKVMVGQPFHQTPIFRSAITYIVLNPTWTITPDIVKNETV 419

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIE 314
             + +DP YL    + ++D  G  V    + W   +   F +  RQD G+ N++   K  
Sbjct: 420 PSIIKDPGYLAKQRLRVLDRNGNAVDPNTIPWTQYQGRYFPYTLRQDAGRDNSLGLIKFL 479

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT--WSRYHIEEVV 372
           F +  + Y+HDTP   LF    R  + GC+RV+N ++L   +L + P    +   +++++
Sbjct: 480 FPNPYHVYLHDTPSKSLFGRTRRAFSHGCIRVQNPLELGRMILANDPGNPTTPAKMDQIL 539

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            + KTT V L   +P++ +Y++A + +D+ + F+ D+Y  D
Sbjct: 540 ASGKTTTVILKQPLPIYLMYLTA-NVQDNKVMFKPDLYSRD 579


>gi|113970169|ref|YP_733962.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-4]
 gi|113884853|gb|ABI38905.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-4]
          Length = 542

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 156/288 (54%), Gaps = 11/288 (3%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +A+K+FQ +HGL   G++   TL  +N     R + L  N +R +++  + +   Y+++N
Sbjct: 253 AAIKVFQTQHGLQADGVIGKQTLYWLNQSPYARAQLLAKNTLR-QQIFTRTLPASYLVIN 311

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           +PA  L+ VE GKV L S VIVG+  R TP+L S I+ ++ NP W +PR+I+++D++  +
Sbjct: 312 VPAFELQFVEAGKVILNSKVIVGKASRPTPLLSSHISSVVVNPQWRVPRTIVRRDILPHI 371

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYS 317
           RQD  YL+D    + D  G  V     +W      +F +R  Q PG  NA+   K  F +
Sbjct: 372 RQDGHYLQDRGFDVYDYDGARVEHSPQEWQELASSHFPYRLVQRPGAKNALGRYKFHFDN 431

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVK 373
             + Y+H T EP LF    R  +SGC+RV  + +L  W    L+KDT  W +        
Sbjct: 432 SFSVYLHGTSEPSLFKKTDRALSSGCIRVEKVEELARWFQTHLVKDTRLWDKL----TPN 487

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           T ++    L+  +PV+ VY +AW      IQ+R+DIY L+      +P
Sbjct: 488 TTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRNDIYHLEAEFTQAVP 535


>gi|30250492|ref|NP_842562.1| putative periplasmic protein [Nitrosomonas europaea ATCC 19718]
 gi|30139333|emb|CAD86485.1| putative periplasmic protein [Nitrosomonas europaea ATCC 19718]
          Length = 578

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 172/307 (56%), Gaps = 8/307 (2%)

Query: 112 QRLRERLII--SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           QR+RE   +    + D +   S  +D  +E+A+K FQ ++GL+  G+V  +T  AMN+  
Sbjct: 255 QRIREAYSVFEKPEYDIASDDSELYDDQLETAIKAFQYQYGLNTDGVVGKNTRRAMNMTA 314

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              I+QL++ L R++  L ++   RY+LVNI   +L A+ N    L   ++VGR  R TP
Sbjct: 315 VEHIQQLRITLERLR-WLPREFSNRYILVNIAGFNLAAIRNNVRVLNMRIVVGRDYRSTP 373

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV--EEVD 287
             +SRI+ ++ NPYW +P SI  KD++   + +P Y     I +  +   E+ +  + +D
Sbjct: 374 SFNSRISHLVLNPYWNVPASIASKDLLPKQKHNPDYFASEGIRVFSDYHYELELDPDAID 433

Query: 288 WNS-PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           W++      ++ RQDPGK NA+ + K  F +  + Y+HDTP   LF   +R  +SGC+R+
Sbjct: 434 WHAFSRSFPYVLRQDPGKRNALGTIKFMFPNPFSIYLHDTPSKSLFQRDIRTFSSGCIRL 493

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
              + L  ++L   P++ + +I E + + KT  V L   +PV+ +Y++AW+     + F 
Sbjct: 494 EKPMQLAEFVLG--PSFEKANILEKIDSGKTQTVHLPEPIPVYLLYLTAWNDGQGEVHFS 551

Query: 407 DDIYGLD 413
            D+YG D
Sbjct: 552 ADVYGRD 558


>gi|114047641|ref|YP_738191.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889083|gb|ABI43134.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-7]
          Length = 558

 Score =  177 bits (448), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 11/294 (3%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +  A+K FQ +HGL   G++   TL  +N     R + L  N +R++ +  + +  
Sbjct: 263 YDDELVRAIKNFQTQHGLQADGVIGKQTLYWLNQSPYARAKLLAKNTLRLQ-IFTRTLPA 321

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            Y+++NIPA  L+ VE GKV L S VIVG+  R TP+L S I+ ++ NP W +PR+I+++
Sbjct: 322 SYLVINIPAFELQFVEAGKVILNSKVIVGKASRPTPLLSSHISSVVVNPQWRVPRTIVRR 381

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMAST 311
           D++  +RQD  YL+D    + D  G  V     +W      +F +R  Q PG  NA+   
Sbjct: 382 DILPHIRQDGHYLQDRGFDVYDYDGARVEHSPQEWQELASSHFPYRLVQRPGAKNALGRY 441

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYH 367
           K  F +  + Y+H T EP LF    R  +SGC+RV  + +L  W    L+KDT  W +  
Sbjct: 442 KFHFDNSFSVYLHGTSEPSLFKKTDRALSSGCIRVEKVEELARWFQTHLVKDTRLWDKL- 500

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
                 T ++    L+  +PV+ VY +AW      IQ+R+DIY L+      +P
Sbjct: 501 ---TPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRNDIYHLEAEFSQAVP 551


>gi|163746379|ref|ZP_02153737.1| peptidoglycan binding domain protein, putative [Oceanibulbus
           indolifex HEL-45]
 gi|161380264|gb|EDQ04675.1| peptidoglycan binding domain protein, putative [Oceanibulbus
           indolifex HEL-45]
          Length = 583

 Score =  176 bits (447), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 179/333 (53%), Gaps = 10/333 (3%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + +LS+GGW P +P   L  G++   V  LR RLI  G L+ S   +V +DA +  AV+ 
Sbjct: 237 EKLLSQGGWGPSVPAGKLEPGDTGNDVIALRNRLIAMGYLERSN--AVGYDATLTDAVRQ 294

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL+  G+   +T++ +N+ V+ R++ + V L R ++      G R++LVNIP  S
Sbjct: 295 FQEAHGLNTDGVAGPATMKQINIGVEQRLQSVMVALER-ERWFNTDRGKRHILVNIPDFS 353

Query: 205 LEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            + +++GK   ++  +VG  R DR TP     +  ++ NP W +PRSI+  + +  L+Q+
Sbjct: 354 AKIIDDGKTTFQTRSVVGAAREDRPTPEFSDVMEHMVVNPSWYVPRSIVTGEYLPQLKQN 413

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
              +  ++I + D  G++V    V+++      F F  RQ P   NA+   K  F ++ N
Sbjct: 414 RNAV--SHIEITDRSGRKVNRGAVNFSKYTARTFPFSMRQPPSNTNALGLVKFMFPNKYN 471

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF+  VR  + GCVR+    +    LL           + V+++ + T +
Sbjct: 472 IYLHDTPAKSLFDRDVRAFSHGCVRLAEPFEFAYALLAPQSADPEGDFQAVLRSGRETRI 531

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            L  +VPVH +Y +A +      ++RDD+YG D
Sbjct: 532 VLEEQVPVHLIYRTAVTNARGHTEYRDDVYGRD 564


>gi|254503422|ref|ZP_05115573.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222439493|gb|EEE46172.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 562

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 176/344 (51%), Gaps = 12/344 (3%)

Query: 76  AQTEKAIAFYQDILSRGGWPELP----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           A+ ++ +A Y++  + G +  +P    ++P   G S   V  LR+RLI       ++   
Sbjct: 210 ARLKRRLAQYREKAATGPFTSVPDGDVLKP---GMSDTRVAALRQRLIEEDIPGAAEHSG 266

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +D  +  AV  FQ  HGL   G++   TL  +N+P++ ++ Q+++N+ R ++ +   +
Sbjct: 267 DVYDGVLVEAVTTFQDHHGLANDGVIGKETLARLNIPLEEKLVQMELNMER-RRWMRDDL 325

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G  YV VN+    L+ V+ GK    + V+VG+    TP+    ++ +  NP+W +P SI 
Sbjct: 326 GSFYVFVNLADQELKVVKEGKTIHTAPVVVGKPYHATPVFSDTLDYVEINPFWNVPYSIA 385

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMA 309
             + +  L+Q+P  L   NI +  + G E+   ++ WNS    NF F  RQDPG  NA+ 
Sbjct: 386 TSEYLPKLKQNPSALSSKNIRVFRD-GTEIAPTQIAWNSYARGNFPFRLRQDPGNSNALG 444

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +  N Y+HDTP   LF+   R  + GC+RV +   L   LL      +  H E
Sbjct: 445 RIKFMFPNEFNIYIHDTPSKSLFSRAERAFSHGCIRVSDPFALADVLLAHK-NANEGHWE 503

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +V  T K T VK +  + VH  Y++AW  KD    FR DIY  D
Sbjct: 504 KVRDTEKRTVVKPSVPIEVHLTYLTAWMNKDGSTHFRKDIYRRD 547


>gi|307545799|ref|YP_003898278.1| hypothetical protein HELO_3209 [Halomonas elongata DSM 2581]
 gi|307217823|emb|CBV43093.1| hypothetical protein HELO_3209 [Halomonas elongata DSM 2581]
          Length = 546

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 182/361 (50%), Gaps = 26/361 (7%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPEL-----PIRPLHLGNSSVSVQRLRERLIISGDLD-- 125
           E   Q  + +A Y++I  +GGWP L     P+RP   G++   V  LRERL   G+    
Sbjct: 183 EPYEQLREGLAHYREIKRQGGWPALMNVEDPLRP---GDTGTEVTALRERLAAIGNDQLV 239

Query: 126 -------PSKGLSV----AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
                  P+  L       +D  +  AV+ FQ  H L   G+V   TL+A+N+ V+ RI 
Sbjct: 240 AADEGYYPTIELQAPEPRVYDEALVEAVRRFQRHHLLADDGVVGPRTLKALNMSVERRID 299

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           Q++ N+ R + LL   +   +VLV+I    L          R+ ++VG+  R+TP L S 
Sbjct: 300 QIRANMERARWLL-HGLPESFVLVDIAGYDLRYFRPNGDTWRARIVVGQPYRRTPSLRSE 358

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I  +  NP W +P +I+++D++  +R+DP YL   N+ ++   GK++    VDW++P   
Sbjct: 359 ITHLTINPTWTVPPTIMREDVLPKVRRDPGYLATKNLSVLSPSGKQLDPASVDWSNPG-- 416

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
             + RQ  G  N +    + F + +  Y+HDTP   LF+   R  +SGC+RV  +++L  
Sbjct: 417 GVMLRQQAGPNNPLGQLVVRFPNDHLVYLHDTPSRGLFSRSQRALSSGCIRVEGVLELAQ 476

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L  DT T  + ++  ++   KT  V LA  VPV   Y +     D  + FR DIY  D+
Sbjct: 477 LLFDDTGT--QANVRRLIADGKTRNVLLARHVPVVLHYWTVQPEPDGELAFRPDIYDRDD 534

Query: 415 V 415
            
Sbjct: 535 A 535


>gi|149915292|ref|ZP_01903820.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           AzwK-3b]
 gi|149811013|gb|EDM70852.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           AzwK-3b]
          Length = 536

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 177/332 (53%), Gaps = 10/332 (3%)

Query: 88  ILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           +  RGGW P +    +  G S  +V  LR+RL+  G LD S   +  +D  +  AV+ FQ
Sbjct: 192 LADRGGWGPTVSAESVKPGQSGAAVTALRDRLVAMGFLDRSA--TQLYDETMLHAVQRFQ 249

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           + HGL P G+    TL  +NVPV  R++ L V + R ++ +   +G R++LVN+      
Sbjct: 250 LAHGLTPDGVAGPGTLAEINVPVQERLKSLIVAMER-ERWINMALGERHILVNLTDFHAR 308

Query: 207 AVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
            +++G V   + V++G+   DR++P     ++ ++ NP W +PRSI   + +  ++++P 
Sbjct: 309 IIDDGAVSFETRVVIGKNTGDRRSPEFSDEMDHMVINPTWHVPRSIAVGEYLPKMKRNPN 368

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTY 322
            +  +++ + + +G++V    V++ +    NF F  +Q P + NA+   K  F ++ N Y
Sbjct: 369 AV--SHLKLYNNRGQQVSRGAVNFAAYNASNFPFSIKQPPSQSNALGLVKFMFPNKYNIY 426

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDTP   LF   VR  + GCVRV+   +L   LL    T  +     ++ T +   V L
Sbjct: 427 LHDTPAKDLFGREVRAYSHGCVRVQKPFELAYELLSKQETDPKRTFHSILDTGREKRVNL 486

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              VPVH +Y +A++     +Q+R DIYG D 
Sbjct: 487 EQVVPVHIIYRTAFTQAKGPVQYRRDIYGRDG 518


>gi|120434782|ref|YP_860468.1| peptidoglycan binding domain-containing protein [Gramella forsetii
           KT0803]
 gi|117576932|emb|CAL65401.1| protein containing peptidoglycan binding-like domain [Gramella
           forsetii KT0803]
          Length = 543

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 170/316 (53%), Gaps = 6/316 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDP-SKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           IRP   G++S  +  + +RL   G  +  S   +  ++  ++ AVK FQ+ H L    ++
Sbjct: 222 IRP---GDNSDRMPSIAKRLSELGYFNGISDSTNTIYNEDIQKAVKEFQLDHDLQEDALL 278

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
            S+T+  +N+    R  Q+ VNL R +    + +G  Y++VNIP   L  ++        
Sbjct: 279 GSTTISNLNLTRRDRYHQILVNLERWR-WYPKNLGKHYIIVNIPDYELSVIKEEDTIRTH 337

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            ++VG   R+TPI    I  I++NP W IP +I + D++   ++D  Y +  NI + D +
Sbjct: 338 KIMVGTEVRKTPIFSDEIGYIIYNPTWTIPPTIKKNDVIPGAKKDIGYFQKKNIKIYDSE 397

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           G +V    VDWNS +   + +RQ  G  N +   KI + +    Y+HDTP   LF    R
Sbjct: 398 GTDVDPASVDWNSSKARGYTYRQPAGPTNPLGIVKIIYPNEYLIYLHDTPSRSLFEKNAR 457

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
            ++SGCVRV++ + L  +LL D  ++    IEE++K+ KTT + +  +V VH  Y + + 
Sbjct: 458 AQSSGCVRVQDALGLAKYLLSDQDSYDDEKIEEILKSGKTTQITVKQKVKVHHFYWTVYQ 517

Query: 398 PKDSIIQFRDDIYGLD 413
            KD+ I+F DDIY LD
Sbjct: 518 KKDA-IKFIDDIYNLD 532


>gi|120598924|ref|YP_963498.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|120559017|gb|ABM24944.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. W3-18-1]
          Length = 484

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 172/333 (51%), Gaps = 16/333 (4%)

Query: 90  SRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           S+  W  L +   L +G +   V  + +RL + GD+     +   +   +   +K FQ+R
Sbjct: 144 SQFSWETLMLENKLTVGQTHPIVNTIAKRLWLLGDMPKEVDVEQVYTDELMLGIKRFQLR 203

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   TL  +N     R   L  N +R +++  +K+  RY+L+N+PA  ++ V
Sbjct: 204 HGLQTDGVIGKQTLYWLNQSPRQRAVLLARNELR-QRIFSRKLTPRYLLINVPAFEMKLV 262

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E  +  L S VIVG+  RQTPIL S+I+ I+ NP W +P SI+++D++  +R+D  YL+D
Sbjct: 263 EQEQTVLTSKVIVGKSSRQTPILDSQISSIVLNPSWRVPSSILRRDILPHIRKDGYYLQD 322

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDT 326
               + D  G+ +F    +W       F ++  Q PG  NA+   K  F +  + Y+H T
Sbjct: 323 REFDVYDYSGQLIFHTTEEWQELASSRFPYQLVQRPGPKNALGKYKFHFDNSFSVYLHGT 382

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTP--V 380
            EP LF    R  +SGC+R+  + +L  W    L+KD   W R      +    T P   
Sbjct: 383 SEPALFKRENRALSSGCIRIEKVNELAQWFKRNLVKDKGLWDR------LAPNVTDPQWF 436

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            L+ ++PVH VY +AW        +R+DIY L+
Sbjct: 437 ALSEKLPVHLVYWTAWLDDKGQDHYRNDIYHLE 469


>gi|325981933|ref|YP_004294335.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
 gi|325531452|gb|ADZ26173.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
          Length = 543

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 191/350 (54%), Gaps = 21/350 (6%)

Query: 79  EKAIAFYQDILSRG-GWPELPIRP-LHLGNSSVSVQRLRERL--------IISGDLDPSK 128
           ++ +A YQ +L     W  +P  P L  G++  S+  +R+R+        ++  +L P+ 
Sbjct: 191 KRTLAHYQILLKNTPEWIRIPSSPSLRPGDTYPSIPLIRQRIAQAYAADGLLEFNLIPNA 250

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
             +  +D  + +A+K FQ +HGL+  G++  +T+ A+N+P++ +IRQL++N+ R++  L 
Sbjct: 251 --NQLYDTELVAAIKAFQAQHGLNTDGIIGKNTINALNIPLEWKIRQLRINMERLR-WLP 307

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           + +G R++LVN     L A+EN +  L   +IVGR  R TP  +  ++ ++ NPYW +P 
Sbjct: 308 RNLGQRHLLVNTAGFYLTAIENDEPVLNMRIIVGRDYRSTPSFNGTLSHMVLNPYWNVPA 367

Query: 249 SIIQKDMMALLRQDPQYLKDNN--IHMIDEKGKEVF-VEEVDWNSPEP--PNFIFRQDPG 303
           SI +KD++   +QDP Y       ++   E+G +      +DW+  +   P F+ RQDPG
Sbjct: 368 SIARKDLLPKQQQDPTYFTTAGFKVYPAQERGAQAIDPGMIDWHELKQRFPYFL-RQDPG 426

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             NA+   K  F +  + Y+HDTP   LF   +R  +SGC+R+    +L  + L      
Sbjct: 427 THNALGKIKFMFSNPFSIYLHDTPSKSLFRKDIRTFSSGCIRLEKPFELAAFALNQPSLP 486

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            ++  +  +++ KT    L   +P++ VYI+AW+ +   + F  DIY  D
Sbjct: 487 EKFSAD--LESDKTITTHLPKPLPIYLVYITAWADEHHKVYFYPDIYDRD 534


>gi|16125758|ref|NP_420322.1| peptidoglycan binding domain-containing protein [Caulobacter
           crescentus CB15]
 gi|221234516|ref|YP_002516952.1| cell wall degradation protein [Caulobacter crescentus NA1000]
 gi|13422888|gb|AAK23490.1| peptidoglycan binding domain protein [Caulobacter crescentus CB15]
 gi|220963688|gb|ACL95044.1| cell wall degradation protein [Caulobacter crescentus NA1000]
          Length = 502

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 171/336 (50%), Gaps = 22/336 (6%)

Query: 81  AIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAY 137
            +A Y+DI ++GGW  +   P L  G +   V  L  RL      DP+  +  A  FDA 
Sbjct: 176 GLATYRDIAAKGGWLPIAAGPELKEGVTGARVVALEARLAAE---DPTVAVDAAPVFDAA 232

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  AV+  Q R GL+P+G+VD +TL A+N+PV+ RI Q+  N+ R +  L Q +    + 
Sbjct: 233 LTQAVQRAQKRFGLNPNGIVDRATLAALNIPVERRIDQIVANMERWR-WLPQTLPAERIQ 291

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VN+ AA L    +    L    + GR   +TP+L S I+ I+ NP W +P+SI  K++  
Sbjct: 292 VNVAAAILSVFHHDTPTLTMRAVTGRPGDETPMLSSMIHSIVLNPPWNVPQSIASKEIWP 351

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
             R  P YL  N+  +I  +G    ++               Q  G + A+   K +F +
Sbjct: 352 KERASPGYLARNDFIVIPIEGGGTRLQ---------------QKAGPLAALGKVKFDFNN 396

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
               Y+HDTP    F++  R  + GCVR++  I+L   +++D PTW+   + E + + +T
Sbjct: 397 PYGVYLHDTPSRSRFDSFSRLASHGCVRLQKPIELVNEVMRDDPTWTPEKVNETLASGET 456

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              KL  ++ V+ +Y +A+   D  + FR D YG D
Sbjct: 457 VRAKLPQQIAVYLLYWTAYVTPDGQVNFRQDPYGWD 492


>gi|146292990|ref|YP_001183414.1| peptidoglycan binding domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|145564680|gb|ABP75615.1| Peptidoglycan-binding domain 1 protein [Shewanella putrefaciens
           CN-32]
          Length = 484

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 172/333 (51%), Gaps = 16/333 (4%)

Query: 90  SRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           S+  W  L +   L +G +   V  + +RL + GD+     +   +   +   +K FQ+R
Sbjct: 144 SQFSWETLMLENKLTVGQTHPIVNTIAKRLWLLGDMPKEVDVEQVYTDELMLGIKRFQLR 203

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   TL  +N     R   L  N +R +++  +K+  RY+L+N+PA  ++ V
Sbjct: 204 HGLQTDGVIGKQTLYWLNQSPRQRAVLLARNELR-QRIFSRKLTPRYLLINVPAFEMKLV 262

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E  +  L S VIVG+  RQTPIL S+I+ I+ NP W +P SI+++D++  +R+D  YL+D
Sbjct: 263 EQEQTVLTSKVIVGKSSRQTPILDSQISSIVLNPSWRVPSSILRRDILPHIRKDGYYLQD 322

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDT 326
               + D  G+ +F    +W       F ++  Q PG  NA+   K  F +  + Y+H T
Sbjct: 323 REFDVYDYSGQLIFHTPEEWQELASSRFPYQLVQRPGPKNALGKYKFHFDNSFSVYLHGT 382

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTP--V 380
            EP LF    R  +SGC+R+  + +L  W    L+KD   W R      +    T P   
Sbjct: 383 SEPALFKRENRALSSGCIRIEKVNELAQWFKRNLVKDKGLWDR------LAPNVTDPQWF 436

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            L+ ++PVH VY +AW        +R+DIY L+
Sbjct: 437 ALSEKLPVHLVYWTAWLDDKGQDHYRNDIYHLE 469


>gi|319426480|gb|ADV54554.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens 200]
          Length = 484

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 172/333 (51%), Gaps = 16/333 (4%)

Query: 90  SRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           S+  W  L +   L +G +   V  + +RL + GD+     +   +   +   +K FQ+R
Sbjct: 144 SQFSWETLMLENKLTVGQTHPIVNTIAKRLWLLGDMPKEVDVEQVYTDELMLGIKRFQLR 203

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   TL  +N     R   L  N +R +++  +K+  RY+L+N+PA  ++ V
Sbjct: 204 HGLQTDGVIGKQTLYWLNQSPRQRAVLLARNELR-QRIFSRKLTPRYLLINVPAFEMKLV 262

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E  +  L S VIVG+  RQTPIL S+I+ I+ NP W +P SI+++D++  +R+D  YL+D
Sbjct: 263 EQEQTVLTSKVIVGKSSRQTPILDSQISSIVLNPSWRVPSSILRRDILPHIRKDGYYLQD 322

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDT 326
               + D  G+ +F    +W       F ++  Q PG  NA+   K  F +  + Y+H T
Sbjct: 323 REFDVYDYSGQLIFHTPEEWQELASSRFPYQLVQRPGPKNALGKYKFHFDNSFSVYLHGT 382

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTP--V 380
            EP LF    R  +SGC+R+  + +L  W    L+KD   W R      +    T P   
Sbjct: 383 SEPALFKRENRALSSGCIRIEKVNELAQWFKRNLVKDKGLWDR------LAPNVTDPQWF 436

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            L+ ++PVH VY +AW        +R+DIY L+
Sbjct: 437 ALSEKLPVHLVYWTAWLDDKGQDHYRNDIYHLE 469


>gi|70729780|ref|YP_259519.1| hypothetical protein PFL_2412 [Pseudomonas fluorescens Pf-5]
 gi|68344079|gb|AAY91685.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
          Length = 523

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 151/283 (53%), Gaps = 6/283 (2%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           A+   + SAVK FQ+ H L   G+V + TL+ MN+    R  QL++NL R++  L Q   
Sbjct: 238 AYSGELVSAVKNFQLGHSLQADGVVGAGTLKEMNISPAERREQLRINLERLR-WLAQDYE 296

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              VLVN+ AA L   ++  V  ++   VGR +RQTP+L S++ R+  NP W +P +I++
Sbjct: 297 PNLVLVNVAAAQLTFYQHDAVVWQTRTQVGRAERQTPLLKSQVTRLTLNPTWTVPPTILK 356

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           +D +  +R+D  +L   N+ ++D  G+ +  E++DW+ P   N + RQ  G  N +    
Sbjct: 357 EDKLPEIRRDQGFLNRQNLQVLDANGQPLAAEDIDWDRPG--NILLRQGAGPRNPLGRIA 414

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
           I F +  + Y+HDTP   LF+   R  +SGCVRV   + L  WLL       R    E++
Sbjct: 415 IRFPNPFSVYLHDTPSQALFSKGPRAFSSGCVRVEQALQLRDWLLSPA---ERLRTNELL 471

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            T  T   +LA  VP+   Y +  +     + +  DIYG D V
Sbjct: 472 ATGLTHEFRLAKPVPILLSYWTVQADSHGQLLYAPDIYGHDQV 514


>gi|218461005|ref|ZP_03501096.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli Kim 5]
          Length = 245

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/211 (44%), Positives = 137/211 (64%), Gaps = 4/211 (1%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
           S LD ++N       +D+FD   A R    I S+ PI+  +++A  ++AI  YQ I + G
Sbjct: 36  SALDGLLNAPRRGNWDDQFDAKAASRTATAIVSNTPILGPQSVASAQQAIMQYQQIAAAG 95

Query: 93  GWPEL--PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GWPE+    + L LG S  +VQ LR+RL I+GDL    GLS AFD+YV+ AVK FQ RHG
Sbjct: 96  GWPEVNPGDQRLQLGVSHPAVQALRQRLAITGDLPREAGLSSAFDSYVDGAVKRFQARHG 155

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G++   TL+AMN+P D+R++QL  N++R++   E  +G R+++VNIPAA +EAVE+
Sbjct: 156 LPADGVLGEFTLKAMNIPADVRLQQLNTNIVRLQTFPE-DLGRRHLMVNIPAAYVEAVED 214

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           G V  R T +VGR+ R T +++S+I  ++ N
Sbjct: 215 GSVATRHTAVVGRLSRPTHLVNSKIYEVILN 245


>gi|254476277|ref|ZP_05089663.1| peptidoglycan-binding domain 1 [Ruegeria sp. R11]
 gi|214030520|gb|EEB71355.1| peptidoglycan-binding domain 1 [Ruegeria sp. R11]
          Length = 539

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 178/333 (53%), Gaps = 10/333 (3%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + + + GGW P +  + L  G+   +V  LR RLI  G L+ S   S+ +D  +E AV+ 
Sbjct: 193 EALQAAGGWGPTVSAKKLERGDQGGAVIALRNRLIEMGYLERSA--SLRYDTALEGAVQK 250

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL+  G+  + T+  +N PV  R++ + V + R ++ L    G R++LVN    +
Sbjct: 251 FQAAHGLEADGVAGAGTISEINKPVSARLKSVLVAMER-ERWLTPDRGERHILVNQTDFT 309

Query: 205 LEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            + ++NG+V  ++  ++G+   DR++P     +  ++ NP W +PRSII K+ +  L+ +
Sbjct: 310 AKIIDNGEVTFQTRSVIGKDHSDRRSPEFSDVMEHMVINPSWYVPRSIITKEYLPKLKAN 369

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P  +   +I + D +G++V     D++     NF +  RQ P + NA+   K  F ++ N
Sbjct: 370 PNAV--GHIEITDSRGRKVNRSTADFSQYTARNFPYAMRQPPSRKNALGLVKFMFPNKYN 427

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP+  LF   VR  + GC+R+    +    LL       +   + ++ + K T V
Sbjct: 428 IYLHDTPQKSLFQREVRAFSHGCIRLAQPFEFAYALLAKQTENPKQFFDRILSSGKETKV 487

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            L  +VPVH +Y +A+   +   ++R D+YG D
Sbjct: 488 DLEQQVPVHLIYRTAFVTPEGRAEYRRDVYGRD 520


>gi|126174124|ref|YP_001050273.1| peptidoglycan binding domain-containing protein [Shewanella baltica
           OS155]
 gi|125997329|gb|ABN61404.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS155]
          Length = 521

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 168/326 (51%), Gaps = 11/326 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G S   V  + +RL + GDL      ++ +   +   VK FQ RHGL   G++   T
Sbjct: 194 LTVGMSHPFVDTIAKRLWLLGDLAIEPTTNLVYSEELVVGVKRFQQRHGLKQDGVIGKQT 253

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           L  +N     R   L  N +R +++ E+K+   Y+L+N+PA  +  V+NG   L S VIV
Sbjct: 254 LYWLNQSPKARAVLLAKNTIR-QRVFERKLEPSYLLINVPAFEMILVDNGTTVLNSKVIV 312

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G+  RQTP+L S+I+ ++ NP W +P SI+++D++  +R++  YL +    + D  G+ V
Sbjct: 313 GKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDILPQIRRNGHYLNERQFDVYDYNGQLV 372

Query: 282 FVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                +W      +F ++  Q PG  NA+   K  F +  + Y+H T EP LFN   R  
Sbjct: 373 QHMPEEWQDLASTSFPYQLVQRPGAKNALGKYKFHFDNSFSVYLHGTSEPSLFNKDDRAL 432

Query: 340 TSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
           +SGC+R+  + +L  W    L+KD   W +     V    +     L+ ++PVH VY +A
Sbjct: 433 SSGCIRIEKVTELAQWFKEHLVKDKRLWDKL----VPDVTEPQWFSLSQKLPVHLVYWTA 488

Query: 396 WSPKDSIIQFRDDIYGLDNVHVGIIP 421
           W       Q+R DIY L+      +P
Sbjct: 489 WLDDSGQEQYRSDIYHLEAELTNAVP 514


>gi|256419987|ref|YP_003120640.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256034895|gb|ACU58439.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 549

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/305 (33%), Positives = 156/305 (51%), Gaps = 4/305 (1%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  +++RL + GDL  +   S  F   ++SA++ FQ R GL   G + +  L A+NV   
Sbjct: 236 VTSVKQRLHLLGDLALAD-TSQLFTPALDSAIRNFQDRTGLKTDGTIQAPLLNALNVTPR 294

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            RIRQ+ +N+ RI+ +  +     Y+LVNIPA  L    N K+     V+VG+    T I
Sbjct: 295 QRIRQILINMERIRWVPAEPPA-EYLLVNIPAFKLYVYNNNKLDWTCNVVVGKPGANTVI 353

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
             + +  ++F PYW +P  I+  +++  ++++  YL   N+ ++   G  V    ++W  
Sbjct: 354 FSNEVKYVVFAPYWNVPPGILVNEVLPAMKRNTGYLARQNMEVVTGSGSPVNAGSLNWAR 413

Query: 291 PEPPNF--IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               NF  I RQ PG  NA+   K  F +  N Y+HDTP   LF    R  + GC+RV  
Sbjct: 414 YSGGNFPYIIRQKPGGHNALGKVKFLFPNEYNIYLHDTPSKGLFGENKRTFSHGCIRVSE 473

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
              L  WLL+   TW++  I E +   K   V L   VPV+  Y +A+   D  + FRDD
Sbjct: 474 PQHLAEWLLRKDSTWTQKKIVEAMNGSKEKFVTLKERVPVYIGYFTAFVDSDGRLNFRDD 533

Query: 409 IYGLD 413
           +YG D
Sbjct: 534 VYGHD 538


>gi|149278087|ref|ZP_01884226.1| cell wall degradation protein [Pedobacter sp. BAL39]
 gi|149231285|gb|EDM36665.1| cell wall degradation protein [Pedobacter sp. BAL39]
          Length = 532

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 183/338 (54%), Gaps = 20/338 (5%)

Query: 79  EKAIAFYQDILSRGGWPELP---IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +K +  Y  +   G + ++    ++   +G+S+++V+++R RLI  GD    K  S  FD
Sbjct: 201 KKRLTSYYQLQQEGKFEDISSGKLKVYRIGDSALTVRQVRLRLIQFGD-STLKDSSSVFD 259

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           + + ++VK  Q ++G+  +G ++ + ++A+NVP++ RI+Q+ +N+ R++ + +   G RY
Sbjct: 260 STLRASVKRAQGQYGMGQNGNINKALIKALNVPLEQRIKQILINMERMRWMPQMPDG-RY 318

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +L NIP   L   E+ K  L   ++VG+   +T I  +++  I+F+PYW IP SI++ ++
Sbjct: 319 LLANIPEYRLHVFEDHKTVLNMGIVVGKAANKTVIFSNKMRNIVFSPYWNIPASIVRAEV 378

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
           +  ++++  YL   N+            E+  +++  P     RQ PG  N++   K  F
Sbjct: 379 LPAMKRNRNYLASKNM------------EQTGFSNGLPE---VRQKPGDNNSLGRVKFLF 423

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +  + Y HDTP   LF    R  + GC+R+     L  +LL     W++  I + +  +
Sbjct: 424 PNSYDIYFHDTPAKSLFAQEKRAFSHGCIRLSQPAALAEYLLDGKSGWTKEKIAKAMSGK 483

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           K   V L++ VPV   Y + W  +D ++ FRDD+YG D
Sbjct: 484 KEVWVALSSPVPVFITYFTCWVDEDGLLNFRDDVYGHD 521


>gi|90022535|ref|YP_528362.1| hypothetical protein Sde_2893 [Saccharophagus degradans 2-40]
 gi|89952135|gb|ABD82150.1| Peptidoglycan-binding domain 1 [Saccharophagus degradans 2-40]
          Length = 563

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/335 (33%), Positives = 175/335 (52%), Gaps = 9/335 (2%)

Query: 94  WPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W  L + P +  G +   +  + ERL   GDL  S+     ++  +  AV  FQ RHGL+
Sbjct: 231 WEPLALSPAIKKGMADTRLSPIAERLRFWGDLSESEETFTHYEGELMEAVTRFQRRHGLE 290

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           P G+V  +TL A+NV    R   + VNL R +  L+Q MG  +++VNI    L   ++ +
Sbjct: 291 PDGVVGKNTLLALNVSPVQRANDVVVNLERWR-WLDQNMGDYFIVVNIANFDLRVYKSNE 349

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           + ++  VIVGR  R+TP+   +I  ++FNP W +P+ +  +D +  +++D  YL+     
Sbjct: 350 LVMQKPVIVGRNYRKTPVFSDKIRFLVFNPTWTVPQKLAVQDKLPEIKKDISYLEKYGFT 409

Query: 273 MIDEKGKEVFVE--EVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           +    G+   V   +V+W+      F +R  Q PG +NA+   K  F +  + Y+HDTP 
Sbjct: 410 LY-ALGENTVVNPADVEWDKLH-KRFPYRMVQAPGPLNALGQVKFMFPNAYDVYLHDTPS 467

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF+   R  +SGC+RV + I+L   LL+         I EV+ + KTT V L T VPV
Sbjct: 468 RELFSKTERAFSSGCIRVSDPIELASKLLEPNGM-GIDQINEVLSSAKTTTVNLKTPVPV 526

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           H  Y +AW      +QFR+DIY  D      + LP
Sbjct: 527 HIEYWTAWVDSSGKLQFRNDIYERDKPLFSALTLP 561


>gi|255035938|ref|YP_003086559.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
 gi|254948694|gb|ACT93394.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
          Length = 540

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 24/311 (7%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    +  L+ RL + GDL P    +  FD  + +AVK FQ R G   +G+   +  + 
Sbjct: 231 GDRDTLITALKTRLHLLGDL-PEPDSTPVFDTTLTAAVKHFQQRVGQKQTGVTGPAFFKE 289

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +NVPV  RIRQ+ +N+ RI+  +       Y+LVNIP  +L A E+GK+     V+VG  
Sbjct: 290 LNVPVTARIRQMLINMERIR-WMPAAPPTDYILVNIPEFTLHAYEDGKLSFDMVVVVGSE 348

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
              T I    +N+++F+PYW +P SI++K+++  ++++P YL  +N+             
Sbjct: 349 ANSTVIFSGTLNQVVFSPYWNVPTSILKKEVLPGIKKNPNYLARHNM------------- 395

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
             +WN         RQ PGK N++   K  F +  + Y HDTP   LF    R  + GC+
Sbjct: 396 --EWNGGS-----VRQKPGKSNSLGLVKFLFPNSYSIYFHDTPSKSLFKESQRAFSHGCI 448

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL--ATEVPVHFVYISAWSPKDSI 402
           R+     +  WLL+   TW+   I   + + K   V+L    EVPV   Y ++W  +   
Sbjct: 449 RLAEPKKMAEWLLRRDSTWTSEKITAAMNSGKEKYVRLRGKNEVPVFIGYFTSWVDQHGN 508

Query: 403 IQFRDDIYGLD 413
           +QFR D+YG D
Sbjct: 509 LQFRKDVYGHD 519


>gi|114570411|ref|YP_757091.1| peptidoglycan binding domain-containing protein [Maricaulis maris
           MCS10]
 gi|114340873|gb|ABI66153.1| Peptidoglycan-binding domain 1 protein [Maricaulis maris MCS10]
          Length = 539

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 166/324 (51%), Gaps = 6/324 (1%)

Query: 94  WPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP +   P L  G+    V +LR RL   G LD        +D  +E+AV+ +Q R  L 
Sbjct: 186 WPGVQSGPSLSAGDVGGRVDQLRTRLTAEGLLDGDWQEGDHYDIRLETAVRRYQGRTNLA 245

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           PSG +D +TL  +N+P D RI QL  NL + ++   + +G R++ VN+    LEA E+G+
Sbjct: 246 PSGRMDQATLRQLNLPPDRRIGQLMANLEQ-RRWRTRDLGRRHIWVNLADFRLEAWEDGQ 304

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           +     V+VGR    TP     +  I+ NP+W +P    +    +  R++P   ++    
Sbjct: 305 LAREHEVMVGRQASSTPEFSEDMQYIVLNPWWGLPNGSARPRFQSF-RRNPSLARELGFR 363

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
           + +  G+ + V E+DW S    ++ +R  Q PG  N M   K  F +RNN Y+HDT E  
Sbjct: 364 IYNRSGEAISVYEIDW-SRWGGDWPYRMSQPPGATNPMGEVKFIFPNRNNIYIHDTTERD 422

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
            F    R  ++GC+RV++ + L  W+L     WSR  I+EVV     T V L   +PVH 
Sbjct: 423 QFVRTRRDFSAGCIRVQDPLALAQWVLDGQDGWSRARIDEVVAGSSPTVVWLDDRIPVHI 482

Query: 391 VYISAWSPKDSIIQFRDDIYGLDN 414
            Y +     D  +++ +D+Y  D+
Sbjct: 483 AYWTVVGDPDGRVRYLNDLYRRDS 506


>gi|89068811|ref|ZP_01156194.1| hypothetical protein OG2516_03630 [Oceanicola granulosus HTCC2516]
 gi|89045581|gb|EAR51644.1| hypothetical protein OG2516_03630 [Oceanicola granulosus HTCC2516]
          Length = 550

 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 178/336 (52%), Gaps = 14/336 (4%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q  L+ GG+       L  G +   V  LR+RL   G L PS  +S+ FDA +E+AV+ F
Sbjct: 204 QRQLNAGGYGPTVSASLERGATGEQVVALRDRLTAMGFLAPS--VSMEFDAALEAAVRRF 261

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q+  GL   G+V  +TL+A+NVP++ R+R + V + R + +   + G R++ VN+   + 
Sbjct: 262 QVSVGLTADGVVGGATLDAINVPLEERLRMVLVAMERERWMNNLERGQRHIWVNLVDYTA 321

Query: 206 EAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
             V+ G V  R+  ++G    DRQTP     ++ ++ NP W +PRSI   + +  LR++ 
Sbjct: 322 AVVDEGHVTFRTKSVIGAGDADRQTPEFSDVMDHMVINPSWYVPRSITVNEYLPSLRRNR 381

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNT 321
             +  +++ +ID  G+ V    V+++      F +  RQ PG  NA+   K  F +R N 
Sbjct: 382 NAV--SHLQVIDRNGRVVNRNSVNFSQYNARTFPYSMRQPPGSSNALGQVKFMFPNRYNI 439

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL---KDTPTWSRYHIEEVVKTRKTT 378
           Y+HDTP   LF+  VR  + GC+R+ +  +    LL   +D P       +  + +   T
Sbjct: 440 YLHDTPSQHLFSETVRTFSHGCIRLDDPYEFAHALLAAQEDDPVG---FFQTRLDSGNET 496

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            V L T VPVH VY +A++  D ++ FR D YG D 
Sbjct: 497 RVNLETPVPVHLVYRTAFTTADGVVNFRPDAYGRDG 532


>gi|146300086|ref|YP_001194677.1| hypothetical protein Fjoh_2331 [Flavobacterium johnsoniae UW101]
 gi|146154504|gb|ABQ05358.1| Uncharacterized protein [Flavobacterium johnsoniae UW101]
          Length = 519

 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 177/334 (52%), Gaps = 26/334 (7%)

Query: 85  YQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           Y+ +     W     E P + L     S ++ ++R RL + GDL      S  +D  +  
Sbjct: 195 YKKLEKSSKWKPIVAETPYKDLRPDAVSPTIAQVRTRLYLLGDL-KQDSKSDFYDRELMD 253

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL-RYVLVN 199
            V  +++R+G  P+ ++    ++ MN+PV  +++ L +N+ RI+ +  + +    YVLVN
Sbjct: 254 GVMKYKVRNGFKPNYILAEEHIKEMNIPVSDKVKTLMLNMERIRAISPELVNNDEYVLVN 313

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           +P+  L  V+NGK+ L S+V VG    +T I + +I+RI+F+PYW +P+SI+Q ++ + +
Sbjct: 314 VPSYELIYVKNGKIELTSSVFVGSPLTKTTIFNGQIDRIVFSPYWTVPQSIVQNELRSKI 373

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
             DP YL + N+ M+                    N   RQ PG  N++   K  F + +
Sbjct: 374 AADPNYLAEKNMEMV--------------------NGQVRQKPGPDNSLGLVKFMFPNSD 413

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
           + YMHDTP   LF+   R  + GC+ V+   +L V +LKD P W++  I++ ++ +  + 
Sbjct: 414 DIYMHDTPSKTLFDFEKRTFSHGCINVKMAKELAVAMLKDYPEWTQAKIDKAMEGKVESS 473

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            KL+ +VP++  Y ++   ++  I F  D+Y  D
Sbjct: 474 FKLSKKVPIYITYFTSLVNENGQIGFFQDVYEKD 507


>gi|126726524|ref|ZP_01742365.1| peptidoglycan binding protein, putative [Rhodobacterales bacterium
           HTCC2150]
 gi|126704387|gb|EBA03479.1| peptidoglycan binding protein, putative [Rhodobacterales bacterium
           HTCC2150]
          Length = 535

 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 171/326 (52%), Gaps = 10/326 (3%)

Query: 93  GW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           GW P +  + L  G S   V  LR R+I  G L   K  S  +D  +  A++LFQ  +GL
Sbjct: 196 GWGPTVRAKSLKPGQSGAEVVALRNRMIRMGYL--RKSASQKYDTNLTKAIQLFQQDNGL 253

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            P G+  + T++ +NV  + R++Q+ V + R ++ L   +G R+V VN+       + NG
Sbjct: 254 LPDGVSGADTIKVVNVSANTRLQQVIVAMER-RRWLNIDLGKRHVFVNLADFRASIINNG 312

Query: 212 KVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           KV   +  +VG+   DR+TP     +  ++ NP W +PRSI  K+ + +L+++P  +  +
Sbjct: 313 KVEFSTRAVVGKNISDRRTPEFSDVMTHMIINPTWHVPRSIAVKEYLPMLKKNPGAV--S 370

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTP 327
           ++ M+D  G+ V    VD+ +    +F F  +Q P   NA+   K  F +++N Y+HDTP
Sbjct: 371 HLRMVDASGRTVSRTNVDFTAYTTKSFPFNLKQPPSNGNALGRVKFMFPNKHNIYLHDTP 430

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
              LF   VR  + GC+R+ +  D    LL    +  + + +  +KT+  T   L + + 
Sbjct: 431 AKSLFARNVRAYSHGCIRLADPFDFAYALLSKEMSNGKDYFQRTLKTKVETQYTLKSSLK 490

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLD 413
           VH  Y +AW P    + +R DIYG D
Sbjct: 491 VHIDYRTAWVPAKGRVNYRRDIYGRD 516


>gi|311747884|ref|ZP_07721669.1| putative peptidoglycan binding protein [Algoriphagus sp. PR1]
 gi|126575878|gb|EAZ80188.1| putative peptidoglycan binding protein [Algoriphagus sp. PR1]
          Length = 548

 Score =  172 bits (437), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 172/323 (53%), Gaps = 3/323 (0%)

Query: 93  GWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDP-SKGLSVAFDAYVESAVKLFQMRHG 150
            W ++ I + +H+G+S+  + RLRERLI    L+  +      +D+ +   +K FQ  HG
Sbjct: 218 NWKKVKISKSIHVGDSNSDIPRLRERLIYWELLEEYAVQDEKVYDSIMMDGIKDFQGTHG 277

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           LD  G++   T +A N     R+ + +VN+ R++ L +      ++LVN+    L+ ++N
Sbjct: 278 LDIDGVIGPQTAQAFNDSPKDRLNKARVNMERLRWLPDTVKNAEFILVNLANFQLDYLKN 337

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
               +   VIVGR   ++PI  + ++ I+F+PYW IP SI   +++  +R++P Y+   N
Sbjct: 338 LDTLISERVIVGRKYHESPIFMAEMSYIVFSPYWNIPYSITHSEIIPSVRKNPNYIAAKN 397

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
           + ++   GK +    ++WNS   P ++ RQ PG  N++   K  F +++N Y+HDT    
Sbjct: 398 MEVVTSSGKVLDPSTINWNSKSFP-YMVRQKPGPGNSLGLVKFMFPNKHNVYIHDTNARS 456

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LF    R  + GC+R++N  D    LL   P W+   I+E +       V+L   +PV  
Sbjct: 457 LFALDDRARSHGCIRIQNPQDFAKELLSYDPYWTSEKIDEAMHQTHEKVVQLDRHIPVVL 516

Query: 391 VYISAWSPKDSIIQFRDDIYGLD 413
           VY++ W+       FR+DIY  D
Sbjct: 517 VYLTFWADSKGEAHFREDIYERD 539


>gi|53804877|ref|YP_113480.1| hypothetical protein MCA1003 [Methylococcus capsulatus str. Bath]
 gi|53758638|gb|AAU92929.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 554

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 188/368 (51%), Gaps = 23/368 (6%)

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLII 120
           G++S +P+         + A+  Y+ +        L + P L  G+    V  LR+RL  
Sbjct: 183 GLESKLPLYR-----NLKAALPRYRGLAENNDVSALALPPKLSPGDRHGEVPALRKRLAA 237

Query: 121 SGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            G L     SK   V     VE AV  FQ RHGL P G++   TL A+NVP   R+RQ++
Sbjct: 238 LGFLWQESSSKEPEVYAGDLVE-AVARFQERHGLAPDGVIGKGTLAALNVPPAARLRQIR 296

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAV----ENGKVGLRSTVIVGRVD--RQTPIL 231
           + L R++ L E+  G  ++LVNIP+  L       E  +V +   V+VGR      TP+ 
Sbjct: 297 LGLERLRWLPERFEG-PFILVNIPSFRLYGYGQDPERPEVSM--NVVVGRSSGGHNTPVF 353

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
           HS +  ++F PYW +PR+I  K+M+  + +DP YL  +N+ ++   G    V E    S 
Sbjct: 354 HSDMTYVVFRPYWNLPRAITVKEMLPGILRDPGYLARHNLELVPSFGNGSQVYEPSLESL 413

Query: 292 E---PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           E     +   RQ PG  NA+   K  F + +N Y+H TP   LF    R  + GC+RV++
Sbjct: 414 EMLSAGSLKLRQRPGPKNALGLVKFAFPNNDNIYLHGTPSVNLFQRARRDFSHGCIRVQD 473

Query: 349 IIDLDVWLLK-DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
            + L  ++LK +  TW++  IEE +   ++  V L   +PV+  Y +  +  D  ++F +
Sbjct: 474 PVGLAEFVLKREGETWTQERIEEAMNGAQSRTVTLKQPLPVYIYYSTVLAEPDGTVRFFE 533

Query: 408 DIYGLDNV 415
           DIYGLD V
Sbjct: 534 DIYGLDRV 541


>gi|304411335|ref|ZP_07392949.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
 gi|307305343|ref|ZP_07585091.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
 gi|304350190|gb|EFM14594.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
 gi|306911646|gb|EFN42071.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
          Length = 521

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 169/328 (51%), Gaps = 15/328 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G S   +  + +RL + GDL      +  +   +   VK FQ RHGL   G++   T
Sbjct: 194 LTVGMSHPLLDTIAKRLWLLGDLAIEPKTNFVYSEELVVGVKRFQQRHGLKQDGVIGKQT 253

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           L  +N     R   L  N +R +++ E+K+   Y+L+N+PA  +  V+NG   L S VIV
Sbjct: 254 LYWLNQSPKARAVLLAKNTIR-QRVFERKLEPSYLLINVPAFEMILVDNGTTVLNSKVIV 312

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G+  RQTP+L S+I+ ++ NP W +P SI+++D++  +R++  YL +    + D  G+ V
Sbjct: 313 GKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDILPQIRRNGHYLNERQFDVYDYNGQLV 372

Query: 282 FVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                +W      +F ++  Q PG  NA+   K  F +  + Y+H T EP LFN   R  
Sbjct: 373 QHMPEEWQDLASTSFPYQLVQRPGAKNALGKYKFHFDNSFSVYLHGTSEPSLFNKDDRAL 432

Query: 340 TSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTP--VKLATEVPVHFVYI 393
           +SGC+R+  + +L  W    L+KD   W +      +    T P    L+ ++PVH VY+
Sbjct: 433 SSGCIRIEKVTELAQWFKEHLVKDKRLWDK------LAPDVTEPQWFSLSQKLPVHLVYL 486

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           +AW       Q+R DIY L+      +P
Sbjct: 487 TAWLDDSGQEQYRSDIYHLEAELTNAVP 514


>gi|167624266|ref|YP_001674560.1| peptidoglycan-binding domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354288|gb|ABZ76901.1| Peptidoglycan-binding domain 1 protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 464

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 161/316 (50%), Gaps = 15/316 (4%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           S+  + +RL + GD + S   S   D  + SA+K FQ RHGL P  ++   T++ +NV  
Sbjct: 144 SIPTIAKRLWLLGDAERSATTSTLLDEKLSSALKRFQRRHGLQPDAIIGPETMKWLNVQP 203

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             R R L  N +   + + Q+ G +++++NIPA  +     G+V L S VIVG+  R TP
Sbjct: 204 IERARMLANNFVLKAEFMAQR-GDQFLVINIPAFEMALFSKGRVELESRVIVGKPYRPTP 262

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +L   I+ ++ NP W +P+ I+  D++  +R+D  Y+ + N  + D     V      W+
Sbjct: 263 LLSGAISNVVINPSWRVPKKILYNDLLPHVRKDGNYIAEGNFDVFDRSNNLVVRTAQQWS 322

Query: 290 ----SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
                P P  F+  Q PG  N +   K  F +  + ++HDT  P LF    R  +SGC+R
Sbjct: 323 DLARGPFPYRFV--QRPGYNNTLGRYKFYFPNDFSIFLHDTSNPKLFERSNRALSSGCIR 380

Query: 346 VRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           V N+  L  W    L+KD  TW   H E      +T    L + + VH VY +AW  + +
Sbjct: 381 VENVEGLANWMAANLVKDKQTWVDRHAERT----RTQWFALNSTLNVHLVYWTAWIDEHN 436

Query: 402 IIQFRDDIYGLDNVHV 417
             QFR+DIY L  ++ 
Sbjct: 437 QAQFRNDIYQLQTLNT 452


>gi|269139502|ref|YP_003296203.1| hypothetical protein ETAE_2157 [Edwardsiella tarda EIB202]
 gi|267985163|gb|ACY84992.1| hypothetical protein ETAE_2157 [Edwardsiella tarda EIB202]
 gi|304559391|gb|ADM42055.1| L,D-transpeptidase YcbB [Edwardsiella tarda FL6-60]
          Length = 544

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 170/329 (51%), Gaps = 10/329 (3%)

Query: 94  WPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGL 151
           WP++P  P L  G+SS ++  LR  L+ SG L  ++ G    +   + +AVK FQ   GL
Sbjct: 202 WPQMPSGPTLRSGDSSPAIATLRAILLRSGALSTAEAGDGDVYTPALVAAVKRFQSGQGL 261

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            P G++   T   +NV   +R   L +N+ R++ LL   +    ++VNIP  S+    +G
Sbjct: 262 TPDGVIGPRTYAWLNVTPSMRAALLALNIQRLR-LLPASVHTG-IMVNIPNYSMTYYRDG 319

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           K  L S VIVGR  R+TP+++S +N ++ NP W +P  ++++D++    +DP Y + +  
Sbjct: 320 KDVLSSRVIVGRPARKTPLMNSELNNVVVNPPWNVPTKLVREDIVPKAMRDPGYFERHGY 379

Query: 272 HMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDT 326
            ++     +V V     +DWNS    NF +  RQ PG  N++   K    S++  Y+HDT
Sbjct: 380 TLLSGWSGDVQVINPYMIDWNSVSARNFPYRVRQAPGASNSLGRFKFNMPSQDAIYLHDT 439

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LFN  +R  +SGCVR+     L   LL D   WS   +   ++   T  V +   +
Sbjct: 440 PNHALFNQDIRALSSGCVRINKASTLADMLLADA-GWSPERVASALQAGNTQYVPIRQRI 498

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           PV   Y +AW       QFR DIY  D +
Sbjct: 499 PVRLYYQTAWVSDGGEPQFRTDIYNYDQL 527


>gi|157961780|ref|YP_001501814.1| peptidoglycan-binding domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157846780|gb|ABV87279.1| Peptidoglycan-binding domain 1 protein [Shewanella pealeana ATCC
           700345]
          Length = 451

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 166/320 (51%), Gaps = 14/320 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           IRP   G S+  +  +  RL + GD   +   S   +  +  A+K FQ+RHGL    ++ 
Sbjct: 136 IRP---GESNPIIPDVVRRLWLLGDASSAATGSNELNLPIVDALKRFQLRHGLKADAIIG 192

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             TL+ +NVP + R   L  N ++  + + Q+   R++++NIPA  +E  ++G++ L S 
Sbjct: 193 PETLKWLNVPPEQRASILAKNFIQRAEFMAQRDD-RFLVINIPAFEMELFDHGELELASR 251

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           VIVG+  R TPIL S I+ ++ NP W +P+ I+  D++  +R+D  Y+   N  + D   
Sbjct: 252 VIVGKPYRPTPILSSSISNVVINPSWRVPKKIMYNDLLPQVRKDGNYISQRNFDVFDRNN 311

Query: 279 KEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
             V      W+  +  P  F F Q PG  N +   K  F +  + Y+HDT +P LF    
Sbjct: 312 NLVMRTAEQWSDLAKGPFPFRFVQRPGTNNTLGRYKFYFPNDFSVYLHDTSDPKLFQRSN 371

Query: 337 RFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           R  +SGC+R+ N+  L  W    L+KD  TW   H +     ++T    L + + VH VY
Sbjct: 372 RALSSGCIRIENVQGLANWMAANLVKDKQTWVDRHADR----KRTQWFALKSSLNVHLVY 427

Query: 393 ISAWSPKDSIIQFRDDIYGL 412
            +AW    +  Q+RDDIY L
Sbjct: 428 WTAWIDGSNQAQYRDDIYQL 447


>gi|260753690|ref|YP_003226583.1| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258553053|gb|ACV75999.1| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 502

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 170/341 (49%), Gaps = 18/341 (5%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A  +  + +Y+ I  +GGWP +P    L +G+ +  V+ LR RL I     P  G S  F
Sbjct: 160 AGLKNGLIYYRAIAEKGGWPVVPTGADLTVGSDNPRVKTLRRRLAIEDKELPDNG-SSHF 218

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA +++AVK  Q R+GL+P+G+V   TL+A+N PV  RI Q+  N+ R +  L + +   
Sbjct: 219 DAALKAAVKRAQQRYGLNPTGVVSGQTLQALNQPVKSRIHQIMANMERWR-WLPRNLPEN 277

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            + VN+ AA L   E  +  +    + GR   +TP+L S I  ++ NP W +P SI +K+
Sbjct: 278 RIQVNVAAAVLTLFEKNQPVMSMKSVTGRPGNETPMLRSTIYSLVINPPWNVPDSIAKKE 337

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
           +    +  P YL+     +I E G+   ++               Q PG  N++   K +
Sbjct: 338 LWPKEKAHPGYLQAAGFKIIGESGQGQRLQ---------------QKPGPRNSLGQLKFD 382

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           F +  + Y+HDTP    F+   R E+ GC+R+ + + L   LL   P W+   +   +  
Sbjct: 383 FPNSYSVYLHDTPGRGAFSRYGRLESHGCIRLEHPVALGERLLAADPAWTGDRLRSEIDK 442

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            +T  V+L   V V   Y +A+   ++ + FR D Y  D +
Sbjct: 443 NETERVRLKQPVAVFLFYWTAFGNGENALSFRSDPYKWDEL 483


>gi|224369240|ref|YP_002603404.1| hypothetical protein HRM2_21420 [Desulfobacterium autotrophicum
           HRM2]
 gi|223691957|gb|ACN15240.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 549

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 175/353 (49%), Gaps = 28/353 (7%)

Query: 80  KAIAFYQDILSRGGWPELP----IRPLHLGNSSVSVQRLRERLI--------ISGDLDPS 127
           K +  Y  +   G W +L     IRP   G+    +  +R+R+         IS   +PS
Sbjct: 196 KGLLHYGLLKYSGKWKDLSGTESIRP---GDEDERIVEIRKRIALLENDNKEISKSAEPS 252

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                 +D  +   V LFQ  HGL   G++  +T++ +N   + R+ Q+++N+ R +   
Sbjct: 253 -----VYDHELLKKVVLFQQTHGLVQDGIIGRNTIQELNKSPEDRVDQIKINMARWR-WQ 306

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           +  +G +Y+LVNI   SL A + G++     VIVG+   QTP+   +I  +  NPYW +P
Sbjct: 307 DHGLGDKYILVNIANYSLYACKTGELKFSMPVIVGKFQHQTPVFSDKIKYLELNPYWNVP 366

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPPN---FIFRQD 301
            SI   + +  LR++P YL + NI +     + G E+    ++W    P     F  RQD
Sbjct: 367 SSIAVNEDLPGLRKNPSYLVEKNIRLFSNWQKDGVEIDSTAINWKRVTPSEMARFKLRQD 426

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL-KDT 360
           PG  NA+   K  F +  + Y+HD+P   LF+   R  + GC+RV     L V+LL ++ 
Sbjct: 427 PGPTNALGRVKFVFPNHYSVYLHDSPAKRLFSEQKRSFSHGCIRVSEPEKLAVFLLDEEG 486

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I +++   K   +K+   VPVH  Y +AW  KD  I F  D+YG D
Sbjct: 487 SEWNIEQIHDLISQGKRKVLKIRLPVPVHITYQTAWVDKDDEILFNGDVYGRD 539


>gi|284007574|emb|CBA73124.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 563

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 175/335 (52%), Gaps = 11/335 (3%)

Query: 94  WPEL-PIRPLHLGNSSVSVQRLRERLIISGDL--DPSKGLSVAFDAYVESAVKLFQMRHG 150
           WP++  +  L  G +S  +  L E L  +G L  D     +  +   +  AVK FQ  +G
Sbjct: 220 WPKINTVSLLKPGQTSNDLVSLSEILTRNGLLTQDADTDNTRHYGGLLVDAVKQFQRMYG 279

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L+P G++ ++TL+ +N     R   L +N+ R++ +  +  G   +LVNIPA +L    N
Sbjct: 280 LEPDGIIGNATLKWLNTSPTDRAGLLAINIQRLRIIPNE--GGSGILVNIPAYTLHFYLN 337

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
            ++ + S VIVGR DR+TPI+ S +N ++ NP W +P S+++KD++   R+DP Y     
Sbjct: 338 NQLIIDSKVIVGRPDRKTPIMSSELNSVVINPPWNVPTSMVRKDILPQARRDPGYFARRG 397

Query: 271 IHMIDEKGKEVF---VEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHD 325
             ++    +  +      ++WN+    +F +  RQ PG  NA+   K    S +  Y+HD
Sbjct: 398 FTVLSGWERNAYPIDPYSINWNAISSSSFPYRVRQAPGPSNALGRYKFNMPSSDAIYLHD 457

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
           TP   LFN   R  +SGCVRV     L   LL    +W +  I+  ++  +T  + +   
Sbjct: 458 TPNHSLFNRQNRSISSGCVRVNKASVLASILLARA-SWDQKRIDGALQLGETRYINIPGR 516

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +P++  Y +AW    +I  FRDDIYG DNV  G +
Sbjct: 517 IPIYLYYQTAWVDNKNIANFRDDIYGYDNVIYGAM 551


>gi|159044168|ref|YP_001532962.1| hypothetical protein Dshi_1619 [Dinoroseobacter shibae DFL 12]
 gi|157911928|gb|ABV93361.1| hypothetical protein Dshi_1619 [Dinoroseobacter shibae DFL 12]
          Length = 536

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 174/343 (50%), Gaps = 10/343 (2%)

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A+  KA    +  +  GGW P++    L  G S   V  LR+RLI  G L   + +S  +
Sbjct: 180 ARLMKAKLEMEKTIGAGGWGPKVTAAALKPGQSGPQVVALRDRLIRMGYL--KRTVSATY 237

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA ++ AV+ FQ  HGL   G+    TL  +N     R++ + V L R ++ +  ++G R
Sbjct: 238 DAALQVAVQRFQQDHGLAADGVAAKITLREINTEPTERLKSIIVGLER-ERWMNFELGPR 296

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +++VNIP      +ENGK    + V+VG+   DR+TP     ++ ++ NP W +PRSI  
Sbjct: 297 HIMVNIPDFHARVMENGKEVFATRVVVGKNTSDRRTPEFSDEMDHMVINPTWNVPRSIAT 356

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
           K+ +  L+++P     + + ++D  G+ V   EVD+      +F F  +Q P   NA+  
Sbjct: 357 KEYLPKLQENPN--AHSYMRLVDASGRTVNRAEVDFTQFNARSFPFDIKQPPSNRNALGL 414

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F +++N Y+HDTP   LF    R  + GCVRV +  D    LL           + 
Sbjct: 415 VKFMFPNKHNIYLHDTPAKSLFGRESRAYSHGCVRVADPFDFAYELLSKQERDPEGFFKT 474

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            +   K T V L   VPVH VY +A++P     Q+R D+YG D
Sbjct: 475 TLAKGKETWVYLDKPVPVHLVYQTAFAPAKGNTQYRRDVYGRD 517


>gi|254490473|ref|ZP_05103659.1| Putative peptidoglycan binding domain protein [Methylophaga
           thiooxidans DMS010]
 gi|224464217|gb|EEF80480.1| Putative peptidoglycan binding domain protein [Methylophaga
           thiooxydans DMS010]
          Length = 501

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 181/353 (51%), Gaps = 22/353 (6%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGL----- 130
           Q    ++ Y+    RGGW  +P  PL   G+S   V  LR RLI     +PS  L     
Sbjct: 152 QLTHFLSQYRGYQLRGGWQTVPTMPLLRPGDSHQHVPSLRARLITE---NPSLNLIEVEQ 208

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           +  +D  +   VK FQ RHGL   G+V S T  A+N  VD  I +++VNL R +  L   
Sbjct: 209 TTIYDRQLVETVKQFQARHGLKIDGIVGSETRAALNQSVDDLITKIRVNLERFR-WLPDD 267

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +G RY+LVN+ +  L AVE+G++ L   VIVG+  R TP  +S +  ++ NPYW +P  +
Sbjct: 268 LGKRYLLVNLGSHQLSAVEDGQIKLNMKVIVGKSQRATPSFNSAMTHLVINPYWNVPHKL 327

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGK--------EVFVEEVDWNSPEPPNFIFRQDP 302
            ++D++   + +P Y   N  ++     +         +  +EV   S E P +  +Q P
Sbjct: 328 ARRDLLPKQQANPDYFFLNEFNLFLRNAEVHTPVDPYRINWDEVSALSSEFP-YRLQQRP 386

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G++NA+   K  F +  N Y+HDTP+  LF+   R  +SGC+RV + + L  + L +   
Sbjct: 387 GELNALGRLKFMFPNPWNIYLHDTPDKALFSENQRNFSSGCIRVEDPLALGQFSLNENNA 446

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            S   ++  + + +    KL T +PV+ VY + W P    ++F  D YG D+ 
Sbjct: 447 QS--WLQSQIDSGQNRGRKLETPLPVYAVYFTIW-PDQGEVRFSPDPYGRDST 496


>gi|160875046|ref|YP_001554362.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS195]
 gi|160860568|gb|ABX49102.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS195]
 gi|315267278|gb|ADT94131.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS678]
          Length = 521

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 169/328 (51%), Gaps = 15/328 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G S   +  + +RL + GDL      ++ +   +   VK FQ RHGL   G++   T
Sbjct: 194 LTVGMSHPLLDTIAKRLWLLGDLAIEPMTNLVYSEELVVGVKRFQHRHGLKQDGVIGKQT 253

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           L  +N     R   L  N +R +++ E+K+   Y+L+N+PA  +  V+NG   L S VIV
Sbjct: 254 LYWLNQSPKARAVLLAKNTIR-QRVFERKLEPSYLLINVPAFEMILVDNGTTVLNSKVIV 312

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G+  RQTP+L S+I+ ++ NP W +P SI+++D++  +R++  YL +    + D  G+ V
Sbjct: 313 GKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDILPQIRRNGHYLNERQFDVYDYNGQLV 372

Query: 282 FVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                +W      +F ++  Q PG  NA+   K  F +  + Y+H T EP LFN   R  
Sbjct: 373 QHMPEEWQGLASTSFPYQLVQRPGAKNALGKYKFHFDNSFSVYLHGTSEPSLFNKDDRAL 432

Query: 340 TSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTP--VKLATEVPVHFVYI 393
           +SGC+R+  + +L  W    L+KD   W +      +    T P    L+ ++PVH VY 
Sbjct: 433 SSGCIRIEKVTELAQWFKEHLVKDKRLWDK------LAPDVTEPQWFSLSQKLPVHLVYW 486

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           +AW       Q+R DIY L+      +P
Sbjct: 487 TAWLDDSGQEQYRSDIYHLEAELTNAVP 514


>gi|114047885|ref|YP_738435.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889327|gb|ABI43378.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-7]
          Length = 560

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 193/361 (53%), Gaps = 20/361 (5%)

Query: 77  QTEKAIAFYQDILSRGGWPELP----IRPLHLGNSSVSVQRLRERLIISGDL------DP 126
           Q ++ +A Y+D+ +R  +  +P    I+P   G++S SVQ +  RL   G L      D 
Sbjct: 190 QLKQYLAQYKDLAARYPFSPIPYTEVIKP---GSTSPSVQGIATRLTELGYLAASAPADN 246

Query: 127 SKGLS--VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           S  +S  + +D+ +E+AV+ FQ  H L   G++ + T+ A+NVP   R+ Q+++NL R  
Sbjct: 247 SAAVSQPLTYDSTLEAAVRQFQTDHSLKADGVIGAGTMAALNVPYSQRVEQIRINLER-A 305

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           + L   +   Y++VN+    L   ++  +  R+ +I+G+++ +TP+  S++  ++ NP W
Sbjct: 306 RWLSANLRANYLIVNLAGYELLLFKDNSLSWRTDIIIGKINAKTPLFKSKLKYVVVNPTW 365

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF--IFRQDP 302
            +PRSI   +++  LR+DP YL+  +  +++  G  V    +DW+S    NF   F Q+P
Sbjct: 366 TVPRSI-STEIINHLRKDPDYLQKKHFKVVEGSGTPVDASGIDWHSMTRKNFPYWFVQEP 424

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G+ N++   K  F ++ + Y+HDTP   LF    R  + GC+RV++ + L   LL     
Sbjct: 425 GEDNSLGVVKFIFPNQYSIYLHDTPAKSLFEQTDRAFSHGCIRVKDPLVLADKLLSANAN 484

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           WS   +   +   KT  + L   + +  +Y +  + KD  I+F +D+Y  D V +  +  
Sbjct: 485 WSSNTLSSKLSEGKTENLFLDEPLDILIMYWTV-TLKDGKIKFYNDVYKRDPVLIEALNR 543

Query: 423 P 423
           P
Sbjct: 544 P 544


>gi|241762099|ref|ZP_04760182.1| Peptidoglycan-binding domain 1 protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373349|gb|EER62949.1| Peptidoglycan-binding domain 1 protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 502

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 170/341 (49%), Gaps = 18/341 (5%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A  +  + +Y+ I  +GGWP +P    L +G+ +  V+ LR R+ I     P  G S  F
Sbjct: 160 AGLKNGLIYYRAIAEKGGWPVVPTGADLTVGSDNPRVKTLRRRIAIEDKELPDNG-SSHF 218

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA +++AVK  Q R+GL+P+G+V   TL+A+N PV  RI Q+  N+ R +  L + +   
Sbjct: 219 DAALKAAVKRAQQRYGLNPTGVVSGQTLQALNQPVKSRIHQIMANMERWR-WLPRNLPEN 277

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            + VN+ AA L   E  +  +    + GR   +TP+L S I  ++ NP W +P SI +K+
Sbjct: 278 RIQVNVAAAVLTLFEKNQPVMSMKSVTGRPGNETPMLRSTIYSLVINPPWNVPDSIAKKE 337

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
           +    +  P YL+     +I E G+   ++               Q PG  N++   K +
Sbjct: 338 LWPKEKAHPGYLQAAGFKIIGESGQGQRLQ---------------QKPGPRNSLGQLKFD 382

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           F +  + Y+HDTP    F+   R E+ GC+R+ + + L   LL   P W+   +   +  
Sbjct: 383 FPNSYSVYLHDTPGRGAFSRYGRLESHGCIRLEHPVALGERLLAADPAWTGDRLRSEIDK 442

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            +T  V+L   V V   Y +A+   ++ + FR D Y  D +
Sbjct: 443 NETERVRLKQPVAVFLFYWTAFGNGENALSFRSDPYKWDEL 483


>gi|46202780|ref|ZP_00052619.2| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 465

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/278 (35%), Positives = 147/278 (52%), Gaps = 9/278 (3%)

Query: 79  EKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           EKA A    I + GGWP +P    L  G++   V  LR RLI SGDL         +DA 
Sbjct: 170 EKARA----IAAAGGWPSIPDGAKLVPGDTDDRVPVLRRRLIASGDLGDGLAEGRTYDAP 225

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  AVK FQ+RHGL+P   +   TL  +NVP D R RQ+ VN+ R +  +    G  ++ 
Sbjct: 226 LAEAVKRFQLRHGLEPDATIGGKTLAHLNVPADARARQIAVNMERWR-WMPHSFGRHHIA 284

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNI A  +E VE+G V +   V+VG V   TP + + ++ ++ NP W +P SI  K+++ 
Sbjct: 285 VNIAAQQMEVVEDGAVAMSMRVVVGDVKHPTPSMSTTMSSVVLNPAWRVPTSIANKEILP 344

Query: 258 LLRQDPQYLKDNNIHMID--EKGKEVFVEEVDWNS-PEPPNFIFRQDPGKINAMASTKIE 314
            LR+DP YL  + + ++D  E   E   + VDWN+  +   +  RQ PG  NA+   K  
Sbjct: 345 KLRKDPNYLTSSKLQIVDYPEGSPESAGDGVDWNAIGKKFPYRLRQPPGPDNALGQLKFN 404

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
               ++ YMHDT    +     R  + GCVR+   ++L
Sbjct: 405 LTDSDDIYMHDTNNRRVXGRSYRALSHGCVRLERPVEL 442


>gi|291326407|ref|ZP_06124362.2| putative peptidoglycan binding domain protein [Providencia rettgeri
           DSM 1131]
 gi|291314414|gb|EFE54867.1| putative peptidoglycan binding domain protein [Providencia rettgeri
           DSM 1131]
          Length = 583

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 154/294 (52%), Gaps = 8/294 (2%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +S  +D  +  AVK FQ+++GL+  G+V   T   +N+    +   + +N+ R++ 
Sbjct: 276 PASTVSKVYDQELVDAVKKFQLQYGLEADGVVGKGTRVWLNMQPKQKAGLMALNIQRLR- 334

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           ++    G   +LVNIP  SL+   N +V L S VIVGR DR+TPI+ S +N ++ NP W 
Sbjct: 335 IIPASSGTG-ILVNIPGYSLDFYLNDEVILDSKVIVGRADRKTPIMSSALNNVVINPPWS 393

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFIF--RQ 300
           +P S+ +KD+    +QDP Y       +    G    E+    +DW++  P NF +  RQ
Sbjct: 394 VPTSMARKDIAPKGKQDPSYFSRKGYTVYSGWGADSYEINPYAIDWDNITPANFPYRIRQ 453

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LFN   R  +SGCVRV    +L   LL D 
Sbjct: 454 APGPTNSLGRYKFNMPSSDAIYLHDTPNHSLFNRNARAISSGCVRVNKASELASILLGDA 513

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             W +  I+  +K   T  V +   +PV   Y +AW  KD   Q+R DIY  DN
Sbjct: 514 -GWEQKRIDGALKEGSTRYVNIPDRIPVFLYYQTAWVDKDQQPQYRADIYQYDN 566


>gi|183598377|ref|ZP_02959870.1| hypothetical protein PROSTU_01769 [Providencia stuartii ATCC 25827]
 gi|188020553|gb|EDU58593.1| hypothetical protein PROSTU_01769 [Providencia stuartii ATCC 25827]
          Length = 575

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 164/339 (48%), Gaps = 28/339 (8%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE-------------------S 140
           + L  G SS  V  LRE L   G LD +  ++   DA                       
Sbjct: 224 KTLKPGQSSDDVIALREILYRQGLLDET-AINTELDAAAPDAEIAKATAQARLYSDELVE 282

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ R+GL+  GMV   T   +N+    +   + +N+ R++ + E       +LVNI
Sbjct: 283 AVKKFQQRYGLEADGMVGKGTKVWLNMKPQQKAGLMALNIQRLRIIPENNG--TGILVNI 340

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PA SL    N +V L S VIVGR DR+TPI+ S +N ++ NP W +P S+ +KD+    +
Sbjct: 341 PAFSLNFFLNDEVILDSKVIVGRPDRKTPIMSSALNNVVINPPWSVPTSMARKDIAPRGK 400

Query: 261 QDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
           QDP Y       +    G++ F      ++W+   P NF +  RQ PG  N++   K   
Sbjct: 401 QDPSYFSRKGYTVYSGWGEDSFEIDPYSINWDVITPANFPYRIRQAPGPTNSLGRYKFNM 460

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LFN   R  +SGCVRV    +L   LL D   W +  I+  VK  
Sbjct: 461 PSSDAIYLHDTPNHSLFNRSARAISSGCVRVNKASELASILLGDA-GWEQKRIDGAVKAG 519

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            T  V +   +PV+  Y +AW  K+   Q+R DIY  DN
Sbjct: 520 STRYVNIPDRIPVYLYYQTAWVDKEQQPQYRADIYQYDN 558


>gi|114562617|ref|YP_750130.1| peptidoglycan binding domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114333910|gb|ABI71292.1| Peptidoglycan-binding domain 1 protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 473

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 166/326 (50%), Gaps = 12/326 (3%)

Query: 94  WPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP + +  L   G+   S++++ +RL + GD        + +   +  +VK FQ RHGL 
Sbjct: 133 WPAITLEGLLRPGDRHPSIKQINQRLWLLGDAYEYLEDEIDYQPALVQSVKRFQSRHGLK 192

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
              ++   TL  +N     R   L  + +     L Q +   Y+L+NIPA  +  V+  +
Sbjct: 193 TDAVIGPKTLFWLNQTPQQRASLLAKSFVEKTVYLSQ-LPQPYLLINIPAFQMVLVDQNQ 251

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V L S VIVG+  RQTP++  +I+ I+ NP W +PR +++KD++  +R +  Y  D +  
Sbjct: 252 VVLASKVIVGKSYRQTPVMTGQISNIVINPTWTVPRQLLRKDILPQVRSNGAYFADRHFD 311

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
           + D +G  V      W       F +R  Q PG  NA+   K  F +  + Y+HDTP P 
Sbjct: 312 VFDYEGHRVDKTPQQWQQAATGKFPYRVVQRPGSGNALGRYKFHFNNDQSVYLHDTPTPE 371

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           +F +V R  +SGCVR+  +  L  W    L+ D  TW+  H++      +T    L++ +
Sbjct: 372 MFAHVERDISSGCVRIEKVQQLADWFANHLVIDKRTWA--HLQS--NHTQTQWFALSSSL 427

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGL 412
           PVH VY  AW  +  + Q+RDDIY L
Sbjct: 428 PVHMVYWRAWVDEQHVAQYRDDIYQL 453


>gi|300722551|ref|YP_003711841.1| putative carboxypeptidase [Xenorhabdus nematophila ATCC 19061]
 gi|297629058|emb|CBJ89643.1| putative carboxypeptidasewith PGDB-like domain [Xenorhabdus
           nematophila ATCC 19061]
          Length = 572

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 13/329 (3%)

Query: 94  WPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHG 150
           W E  ++  L LG S+ ++  L + L+ SG LDPS   S    ++  + +AVK FQ  HG
Sbjct: 228 WTEFLLKSTLRLGQSNENMAALEKILVRSGVLDPSVTNSDNKVYNKALVAAVKRFQTLHG 287

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYVLVNIPAASLEAVE 209
           L   G++  ST   +N    +R R + +N+ R++ +  +   G   + VNIP  SL+   
Sbjct: 288 LAADGVIGQSTKTWLNTAPQIRARIMALNIQRLRIIPGDIPTG---IFVNIPNYSLDYYL 344

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           NGK  L S V+VGR  R+TPI+ S +N ++ NP W +P S+ +KD+     +DP Y +  
Sbjct: 345 NGKEVLNSKVVVGRPSRKTPIMSSELNNVVINPPWNVPTSMTRKDIAPRAMRDPGYFRTR 404

Query: 270 NIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMH 324
              +      +  V     ++W    P NF +  RQ PG  N++   K    + +  Y+H
Sbjct: 405 GYTVFSSWSNDAKVIDSSSINWGVVTPGNFPYRIRQAPGPTNSLGRFKFNMPNSDAIYLH 464

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP    FN  +R  +SGCVRV    +L   LL D   W +  +   +KT  T  V +  
Sbjct: 465 DTPNQTAFNREMRAISSGCVRVNKAPELADMLLGDA-GWDKSKVNNSLKTWATKYVSIPK 523

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           ++PV   Y +AW  K  I Q+R DIY  D
Sbjct: 524 KIPVFLYYQTAWVDKKGIPQYRADIYDYD 552


>gi|283856545|ref|YP_163499.2| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|283775552|gb|AAV90388.2| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 483

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 170/341 (49%), Gaps = 18/341 (5%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A  +  + +Y+ I  +GGWP +P    L +G+ +  V+ LR R+ I     P  G S  F
Sbjct: 141 AGLKNGLIYYRAIAEKGGWPVVPTGADLTVGSDNPRVKTLRRRIAIEDKELPDNG-SSHF 199

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA +++AVK  Q R+GL+P+G+V   TL+A+N PV  RI Q+  N+ R +  L + +   
Sbjct: 200 DAALKAAVKRAQQRYGLNPTGVVSGQTLQALNQPVKSRIHQIMANMERWR-WLPRNLPEN 258

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            + VN+ AA L   E  +  +    + GR   +TP+L S I  ++ NP W +P SI +K+
Sbjct: 259 RIQVNVAAAVLTLFEKNQPVMSMKSVTGRPGNETPMLRSTIYSLVINPPWNVPDSIAKKE 318

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
           +    +  P YL+     +I E G+   ++               Q PG  N++   K +
Sbjct: 319 LWPKEKAHPGYLQAAGFKIIGESGQGQRLQ---------------QKPGPRNSLGQLKFD 363

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           F +  + Y+HDTP    F+   R E+ GC+R+ + + L   LL   P W+   +   +  
Sbjct: 364 FPNSYSVYLHDTPGRGAFSRYGRLESHGCIRLEHPVALGERLLAADPAWTGDRLRSEIDK 423

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            +T  V+L   V V   Y +A+   ++ + FR D Y  D +
Sbjct: 424 NETERVRLKQPVAVFLFYWTAFGNGENALSFRSDPYKWDEL 464


>gi|113866566|ref|YP_725055.1| hypothetical protein H16_A0537 [Ralstonia eutropha H16]
 gi|113525342|emb|CAJ91687.1| Uncharacterized protein conserved in bacteria [Ralstonia eutropha
           H16]
          Length = 530

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 174/346 (50%), Gaps = 12/346 (3%)

Query: 80  KAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +A+A Y++I  +  W    P LP   L  G        L  RL+  GDL     +   ++
Sbjct: 162 EALARYREIAKQPAWGQPLPPLPASKLTPGQPWAGAAALAARLVALGDLPAGTQVPARYE 221

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +   VK FQ RHGL+  G++ ++TL  +N+P+  R+RQ+++ + R++       G R 
Sbjct: 222 GTLVDGVKAFQSRHGLEADGVIGAATLAQLNLPIASRVRQIELTMERLR--WTPLDGPRM 279

Query: 196 VLVNIPAASLEAVE--NGK--VGLRSTVIVGR-VDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++VN+P   L A E  +GK  + L   VIVG+ +D +TP+    +  I F+PYW IP SI
Sbjct: 280 IVVNVPEFMLRAYEIRDGKLDIKLEMKVIVGKALDTRTPLFEEDMRYIEFSPYWNIPPSI 339

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINAMA 309
            +++ +  LR+DP Y     +  +   GK V  + E +  +        RQ PG +NA+ 
Sbjct: 340 ARRETVPHLRRDPAYFNRQGLEFVTGDGKAVTTLSEENLEAVLNGRMRIRQRPGPLNALG 399

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +  N Y+H TP P LF    R  + GC+RV   + L  ++L D P W+   I 
Sbjct: 400 DIKFVFPNNENIYLHHTPSPQLFKRGRRDFSHGCIRVEAPVALAQFVLHDMPDWNETRIR 459

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           E +   K+  V+L   +PV   Y +  +  D  + F  DIYG D +
Sbjct: 460 EAMTRGKSNTVRLQQPLPVVLAYGTVIARADGRVSFLPDIYGHDKL 505


>gi|294636885|ref|ZP_06715215.1| cell wall degradation protein [Edwardsiella tarda ATCC 23685]
 gi|291089915|gb|EFE22476.1| cell wall degradation protein [Edwardsiella tarda ATCC 23685]
          Length = 550

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 168/330 (50%), Gaps = 12/330 (3%)

Query: 94  WPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKG-LSVAFDAYVESAVKLFQMRHGL 151
           WP+LP  P +  G+SS ++  LRE L  SG L  ++      +   + +AVK FQ   GL
Sbjct: 208 WPKLPSGPTIRPGDSSPALPILREILRRSGVLSANQADEGEVYTPALVAAVKRFQRDQGL 267

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYVLVNIPAASLEAVEN 210
            P G++   T   +NV   LR   L +N+ R++ L    + G   ++VNIP  SL    +
Sbjct: 268 TPDGVIGPRTYAWLNVTPQLRAALLALNIQRLRILPAAMQTG---IMVNIPNYSLIYYRD 324

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           GK  L S VIVGR  R+TP+++S +N ++ NP W +P  ++++D++    +DP Y   + 
Sbjct: 325 GKDVLASRVIVGRPSRKTPLMNSELNNVVVNPPWNVPTKLVREDIVPKAMRDPGYFDRHG 384

Query: 271 IHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHD 325
             ++     +  V     +DWNS    NF +  RQ PG  N++   K    S++  Y+HD
Sbjct: 385 YTLLSGWSSDAQVINPYMIDWNSVSARNFPYRVRQAPGASNSLGRFKFNMPSQDAIYLHD 444

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
           TP   LFN  +R  +SGCVRV     L   LL D   WS   +   ++   T  V +   
Sbjct: 445 TPNHALFNQDIRALSSGCVRVNKASTLADMLLADA-GWSDQRVAAALQAGNTQYVPIRQR 503

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           +PV   Y +AW   D   QFR DIY  D +
Sbjct: 504 IPVRLYYQTAWVDGDGAPQFRTDIYNYDQL 533


>gi|163743284|ref|ZP_02150665.1| peptidoglycan binding protein, putative [Phaeobacter gallaeciensis
           2.10]
 gi|161383472|gb|EDQ07860.1| peptidoglycan binding protein, putative [Phaeobacter gallaeciensis
           2.10]
          Length = 544

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 169/327 (51%), Gaps = 10/327 (3%)

Query: 92  GGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GGW P++  + L  G+S  +V  LR RLI  G L  S      +D  +E AV+ FQ  HG
Sbjct: 204 GGWGPQVAAKKLESGDSGPAVIALRNRLIAMGYLPRSAARR--YDGALERAVQAFQSDHG 261

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G+    TL  +N PV  R++ + V + R ++ L  + G R+VLVN    + + ++N
Sbjct: 262 LTADGVAGGGTLAEINKPVSARLKSVLVAMER-ERWLTPERGTRHVLVNQTDFTAKIIDN 320

Query: 211 GKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           G+V   +  ++G+   DR++P     +  ++ NP W +PRSI+ K+ +  LR +P  +  
Sbjct: 321 GEVTFVTRSVIGKDNADRRSPEFSDEMEHMVINPSWYVPRSIVTKEYLPKLRNNPNAV-- 378

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDT 326
            +I + D +G++V     D++      F F  RQ P + NA+   K  F ++ N Y+HDT
Sbjct: 379 GHIEITDSRGRKVNRATADFSKYTARTFPFAMRQPPSRKNALGLVKFMFPNKYNIYLHDT 438

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P+  LF   VR  + GC+R+    +    LL       +     ++ + K T V L  +V
Sbjct: 439 PQKSLFQREVRAFSHGCIRLAQPFEFAYALLARQTENPKDFFHRILNSGKETKVVLDQKV 498

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLD 413
           PVH +Y +A+       ++R DIYG D
Sbjct: 499 PVHIIYRTAFVTPKGQPEYRRDIYGRD 525


>gi|163736471|ref|ZP_02143890.1| Peptidoglycan-binding domain 1 [Phaeobacter gallaeciensis BS107]
 gi|161390341|gb|EDQ14691.1| Peptidoglycan-binding domain 1 [Phaeobacter gallaeciensis BS107]
          Length = 544

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 169/327 (51%), Gaps = 10/327 (3%)

Query: 92  GGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GGW P++  + L  G+S  +V  LR RLI  G L  S      +D  +E AV+ FQ  HG
Sbjct: 204 GGWGPQVAAKKLESGDSGPAVIALRNRLIAMGYLPRSAARR--YDGALERAVQAFQSDHG 261

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G+    TL  +N PV  R++ + V + R ++ L  + G R+VLVN    + + ++N
Sbjct: 262 LTADGVAGGGTLAEINKPVSARLKSVLVAMER-ERWLTPERGTRHVLVNQTDFTAKIIDN 320

Query: 211 GKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           G+V   +  ++G+   DR++P     +  ++ NP W +PRSI+ K+ +  LR +P  +  
Sbjct: 321 GEVTFVTRSVIGKDNADRRSPEFSDEMEHMVINPSWYVPRSIVTKEYLPKLRNNPNAV-- 378

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDT 326
            +I + D +G++V     D++      F F  RQ P + NA+   K  F ++ N Y+HDT
Sbjct: 379 GHIEITDSRGRKVNRATADFSKYTARTFPFAMRQPPSRKNALGLVKFMFPNKYNIYLHDT 438

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P+  LF   VR  + GC+R+    +    LL       +     ++ + K T V L  +V
Sbjct: 439 PQKSLFQREVRAFSHGCIRLAQPFEFAYALLARQTENPKDFFHRILNSGKETKVVLDQKV 498

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLD 413
           PVH +Y +A+       ++R DIYG D
Sbjct: 499 PVHIIYRTAFVTPKGQPEYRRDIYGRD 525


>gi|126737821|ref|ZP_01753551.1| peptidoglycan binding protein, putative [Roseobacter sp. SK209-2-6]
 gi|126721214|gb|EBA17918.1| peptidoglycan binding protein, putative [Roseobacter sp. SK209-2-6]
          Length = 537

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 171/333 (51%), Gaps = 10/333 (3%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + ++  GGW   +P   L  G+   +V  LR RLI  G L  S   S  +D  +E AV+ 
Sbjct: 191 EQLVEAGGWGTSVPASKLEPGDQGAAVVSLRNRLIKMGFLQRSA--SATYDRNMERAVER 248

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL+  G+  + TL+ +N PV  R++ + V + R ++ L  + G R+VLVN    +
Sbjct: 249 FQSEHGLEVDGVAGTGTLKEINRPVQDRLKSVIVAMER-ERWLAPERGERHVLVNQTDFT 307

Query: 205 LEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              V+NG V   +  ++G+   DR++P     +  ++ NP W +PRSII K+ +  LR +
Sbjct: 308 ARIVDNGDVTFETRSVIGKNTHDRRSPEFSDTMEHMVINPSWYVPRSIITKEYLPKLRNN 367

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P  +   +I + D +G+ V     D++     NF +  +Q P   NA+   K  F ++ N
Sbjct: 368 PNAV--GHIQITDSRGRVVNRSTADFSQFTARNFPYAMKQPPSSRNALGLVKFMFPNKYN 425

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP+  LF   VR  + GC+R+    +    LL       +     ++ + K T V
Sbjct: 426 IYLHDTPQKSLFQREVRAFSHGCIRLAQPFEFAYALLARQTEDPKAFFHRILSSGKETKV 485

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +L  +VPVH +Y +A+       +FR D+YG D
Sbjct: 486 ELEQQVPVHIIYRTAYVSNKGRAEFRRDVYGRD 518


>gi|229591001|ref|YP_002873120.1| hypothetical protein PFLU3558 [Pseudomonas fluorescens SBW25]
 gi|229362867|emb|CAY49777.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 532

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 165/317 (52%), Gaps = 13/317 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V  L  RLI  G L  +       D  V+ AVK FQ+ H L   G++ + T
Sbjct: 217 LRPGMEDPRVPELARRLISGGYLATASSGKQYHDELVK-AVKAFQLSHSLQADGVIGAGT 275

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           +  +N+   +R  QL++NL R +  L Q +    VLVN+ AA L   ++G    ++ + V
Sbjct: 276 VAELNISPAIRREQLRINLERFR-WLAQDLEPEGVLVNVAAAQLSVYQSGIPVWQTRLQV 334

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           GR +RQTP+L SRI R+  NP W IP +I+++D +  +R +P+YL+  N+ ++D +G  +
Sbjct: 335 GRAERQTPLLKSRITRLTLNPTWTIPPTIMREDKLPAIRLNPEYLRQQNLQVLDAEGHPL 394

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
             E++DW  P   N + RQ+ G  N +    + F +  + Y+HDTP   LF    R  +S
Sbjct: 395 APEQIDWARPG--NILLRQEAGPRNPLGKIVMRFPNPYSVYLHDTPSQPLFTKGPRAFSS 452

Query: 342 GCVRVRNIIDLDVWLLKD---TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
           GCVRV   +     LL+D   +P   R   +E++ T  T   +LAT VPV   Y +    
Sbjct: 453 GCVRVEQPL-----LLRDLLVSPA-ERARTDELLATGVTHEFRLATPVPVLLGYWTVEVD 506

Query: 399 KDSIIQFRDDIYGLDNV 415
           +   + +  DIY  D V
Sbjct: 507 RQGGLVYAPDIYARDLV 523


>gi|113970655|ref|YP_734448.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885339|gb|ABI39391.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-4]
          Length = 560

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 194/361 (53%), Gaps = 20/361 (5%)

Query: 77  QTEKAIAFYQDILSRGGWPELP----IRPLHLGNSSVSVQRLRERLIISGDL------DP 126
           Q ++ +A Y+D+++R  +  +P    I+P   G++S SVQ +  RL   G L      D 
Sbjct: 190 QLKQYLAQYKDLVTRYPFSPIPYTEVIKP---GSTSPSVQGIATRLTELGYLAASAPADN 246

Query: 127 SKGLS--VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           S  ++  + +D+ +E+AV+ FQ  H L   G++ + T+ A+NVP   R+ Q+++NL R  
Sbjct: 247 SAAVNQPLTYDSTLEAAVRQFQTDHSLKADGVIGAGTMAALNVPYSQRVEQIRINLER-A 305

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           + L   +   Y++VN+    L   ++  +  R+ +I+G+++ +TP+  S++  ++ NP W
Sbjct: 306 RWLSANLPANYLIVNLAGYELLLFKDNSLSWRTDIIIGKINAKTPLFKSKLKYVVVNPTW 365

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF--IFRQDP 302
            +PRSI   +++  LR+DP YL+  +  +++  G  V    +DW+S    NF   F Q+P
Sbjct: 366 TVPRSI-STEIINHLRKDPDYLQKKHFKVVEGSGTPVDASGIDWHSMTRKNFPYWFVQEP 424

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G+ N++   K  F ++ + Y+HDTP   LF    R  + GC+RV++ + L   LL     
Sbjct: 425 GEDNSLGVVKFIFPNQYSIYLHDTPAKSLFEQTDRAFSHGCIRVKDPLVLADKLLSANAN 484

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           WS   +   +   KT  + L   + +  +Y +  + KD  I+F +D+Y  D V +  +  
Sbjct: 485 WSSNTLSSKLSEGKTENLFLDEPLDILIMYWTV-TLKDGKIKFYNDVYKRDPVLIEALNR 543

Query: 423 P 423
           P
Sbjct: 544 P 544


>gi|304320160|ref|YP_003853803.1| hypothetical protein PB2503_02927 [Parvularcula bermudensis
           HTCC2503]
 gi|303299063|gb|ADM08662.1| hypothetical protein PB2503_02927 [Parvularcula bermudensis
           HTCC2503]
          Length = 572

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 194/393 (49%), Gaps = 20/393 (5%)

Query: 22  MGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
           M  S  ++P+H+ ++  +             D    +++  I   IP  S     + ++ 
Sbjct: 164 MASSATDRPVHSQLVKSV------------RDAGQGKIERSISPFIP--SNPQYERLQET 209

Query: 82  IAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVE 139
           +  Y+ I   GGW  L + P+   G+    +  LR RL   G LD      S   D  + 
Sbjct: 210 LKTYRQIEEDGGWEALDVGPIVKPGDRHAVISPLRTRLAKEGFLDRQHDNGSPLLDRPLR 269

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           SA+   Q +HG+D  G+    T  A+N PV+ +I +L  +L R ++L +  +G +YV  N
Sbjct: 270 SALIAAQAQHGIDEDGVFGPETARALNEPVESKIARLADSLYRWRELGD--LGDKYVWAN 327

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP+   E  +N +  +    I+G+ DR TP    +++ I+ NP W +P SI+Q+D +  L
Sbjct: 328 IPSFRAEGWKNRRKEISMRAIMGQPDRPTPTFSDKVDYIVANPKWYVPSSIMQRDKLPKL 387

Query: 260 RQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSPE-PPNFIFRQDPGKINAMASTKIEFYS 317
           ++DP Y       +ID+  G+ V   EVDW + +    +   Q  GK NA+   KI F +
Sbjct: 388 QRDPGYAARGEYTVIDKTTGEAVSPYEVDWFADDVTARYRLVQGAGKGNALGRIKIIFPN 447

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
           + + Y+HDTP   LF++  R  +SGCVR+ +  ++  W+ +         IE  ++ ++T
Sbjct: 448 QYSVYLHDTPTKSLFDHATRAFSSGCVRLEHPQEMAEWIARTNGQEKVDQIEMALRDKET 507

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
             V+L+ E+PVH  Y++    +     F  DIY
Sbjct: 508 ERVELSAELPVHITYMTVTVDEAGTPTFWRDIY 540


>gi|332187614|ref|ZP_08389350.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
 gi|332012362|gb|EGI54431.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
          Length = 510

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 166/335 (49%), Gaps = 22/335 (6%)

Query: 81  AIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-FDAYV 138
            +A Y+ +   GGW  LP    +  G+S   V +LR+RL +    DP+   + A FD  +
Sbjct: 177 GLARYRAMAEAGGWTALPANASIPYGSSGPLVAQLRKRLAME---DPAVSQTGATFDEPL 233

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
            +AV+  Q R+GL+P G V S T+ A+NVPV  RIRQ+  N+ R +  L Q++  + V V
Sbjct: 234 LAAVRRAQRRYGLNPVGTVGSQTIAALNVPVSQRIRQIMANMERWR-WLPQQLEAKRVQV 292

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           NI AA L   E     L    + GR   +TP+L S I+ ++ NP W +P SI  K++   
Sbjct: 293 NIAAAVLTVFEGDNPVLSMKAVTGRPGNETPMLVSSIHSVVLNPPWNVPSSIANKELWPK 352

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
            R +P YLK N   +ID       +++    S                A+   K +F + 
Sbjct: 353 ERANPGYLKRNGFRVIDNGDGSKRLQQSSEKS----------------ALGRFKFDFPND 396

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
              Y+HDTP    F+   R  + GCVR+    +L   +LK TP W    ++  + + KT 
Sbjct: 397 FAVYLHDTPAQSGFSKFDRLASHGCVRLEKPAELAGLVLKTTPEWQPAAVDATLASGKTV 456

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +   V V+ +Y +A++  D  + FR+D YG D
Sbjct: 457 RASMDEPVAVYLLYWTAFANSDGQVSFREDPYGWD 491


>gi|254462001|ref|ZP_05075417.1| peptidoglycan-binding domain 1 [Rhodobacterales bacterium HTCC2083]
 gi|206678590|gb|EDZ43077.1| peptidoglycan-binding domain 1 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 536

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 174/330 (52%), Gaps = 10/330 (3%)

Query: 89  LSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           L++GGW + +P + L  G +  +V  LR RL + G L  S   S  +DA ++SA++ FQ+
Sbjct: 193 LAKGGWGQKVPQKSLKPGQTGNAVVILRNRLQVMGYLKRSS--SQTYDAAMQSAMQQFQL 250

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
             GL+P G+    T+  +N P++  ++ + V + R ++ + +  G R++ VN+   S   
Sbjct: 251 SRGLNPDGIAGPGTMAEINRPIESHLQAIMVAMER-ERWMNRPRGKRHIWVNLTDFSATI 309

Query: 208 VENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
           ++NGK   RS  ++G+   DR++P     +  ++ NP W +PRSI  K+ + LL+++P  
Sbjct: 310 IDNGKESFRSRSVIGKNQRDRRSPEFSDVMEFLVVNPTWNVPRSIATKEYLPLLKKNPNA 369

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYM 323
           +   ++ ++D +G+ V     ++       F F  +Q P   NA+   K  F +R+N Y+
Sbjct: 370 V--GHLRIVDSRGRTVSRSAANFGEYSAKTFPFSIKQPPSNSNALGLVKFMFPNRHNIYL 427

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF+  VR  + GC+R+    +    LL    +  +   +  + T   T V L 
Sbjct: 428 HDTPAKNLFSREVRAYSHGCIRLHQPFEFAYALLAKQTSDPKGFFQSKLSTGTETQVNLN 487

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             VPVH VY +A+   +    +R DIYG D
Sbjct: 488 APVPVHIVYRTAFVTANGTANYRRDIYGRD 517


>gi|146280663|ref|YP_001170816.1| putative periplasmic protein [Pseudomonas stutzeri A1501]
 gi|145568868|gb|ABP77974.1| putative periplasmic protein [Pseudomonas stutzeri A1501]
          Length = 495

 Score =  169 bits (427), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 171/319 (53%), Gaps = 9/319 (2%)

Query: 93  GWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
            W  LP  P L  G        LRE L+      P+  L + +D  +  AV+ FQ++HGL
Sbjct: 171 AWRPLPSGPTLRPGMRDERSPLLRELLLAGAGSTPA--LDLRYDDELVEAVRGFQLQHGL 228

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  G+V ++TL A+NV    R+ QL++NL R++  + + +  + +LV+I  A L    + 
Sbjct: 229 EADGVVGAATLVALNVSPASRLDQLRINLERLR-WISRDLEPQSLLVDIAGARLIYFRDS 287

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
               ++   VGR  RQTP+L SRI+R+  NP W +P +I+++D + L+R+D  YL  + +
Sbjct: 288 CPFWQTRTQVGREARQTPLLKSRISRLTLNPTWTVPPTILKQDKLPLIREDIAYLARHQM 347

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            +ID +G  V    VDW +P     + RQD G  N +    I F +  + Y+HDTP   L
Sbjct: 348 RVIDAQGNAVDPYAVDWANPR--GILLRQDAGPANPLGQVAIRFANPFSVYLHDTPSKPL 405

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F    R  +SGCVRV + + L   LL++     R  +  ++++ +T   +LA + P+   
Sbjct: 406 FERAARAVSSGCVRVESALQLVDLLLEED---ERDTVARLLQSGETHEYRLARQTPILMA 462

Query: 392 YISAWSPKDSIIQFRDDIY 410
           Y +A +    + ++R DIY
Sbjct: 463 YWTADADDSGLPRYRPDIY 481


>gi|226330682|ref|ZP_03806200.1| hypothetical protein PROPEN_04602 [Proteus penneri ATCC 35198]
 gi|225201477|gb|EEG83831.1| hypothetical protein PROPEN_04602 [Proteus penneri ATCC 35198]
          Length = 575

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 169/331 (51%), Gaps = 14/331 (4%)

Query: 94  WPELP-IRPLHLGNSSVSVQRLRE-----RLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           WPE+     L    SS  V  LR+     +LI    ++  +  +  +DA + +AVKLFQ 
Sbjct: 231 WPEMKGTTSLKPNQSSQEVVPLRQILRNLKLIPELAVNEQEIATTVYDASLVAAVKLFQT 290

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
            HGL+P G++   T   +N+    R   + +N+ R++  L   +G   + VNIP  SL  
Sbjct: 291 AHGLEPDGIIGRQTRTWLNITPAQRASIMALNIQRLR--LTPAIGDTGIWVNIPDFSLYF 348

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
             N ++ L S VIVGR DR+TPI+ S +N ++ NP W +P S+ +KD++   + DP Y  
Sbjct: 349 YANNELILDSKVIVGRPDRKTPIMSSALNNVVVNPPWNVPTSMTRKDIVPRGKADPSYFS 408

Query: 268 DNNIHMIDEKGKEVF---VEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTY 322
                +    G + +     ++DW +    NF +R  Q PG  N++   K    + +  Y
Sbjct: 409 RKGYTIYSGWGNDAYPINPYDIDWQNVSANNFPYRIWQAPGPTNSLGRYKFNMPNSDAIY 468

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDTP   LF+  +R  +SGC+RV    +L   LL D   W +  I+  +K   T    +
Sbjct: 469 LHDTPNHSLFSKNMRAISSGCIRVNKASELASILLGDA-GWKQDRIDAALKRGSTQYAPI 527

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +PV+  Y +AW  +++  Q+R DIYG D
Sbjct: 528 PERIPVYLYYQTAWVAQENAPQYRADIYGYD 558


>gi|146302694|ref|YP_001197285.1| hypothetical protein Fjoh_4967 [Flavobacterium johnsoniae UW101]
 gi|146157112|gb|ABQ07966.1| hypothetical lipoprotein [Flavobacterium johnsoniae UW101]
          Length = 523

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 173/340 (50%), Gaps = 30/340 (8%)

Query: 81  AIAFYQDILSRGGWPELPI----RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
           A+  Y++I   GGW  + I    + L LG+SS  V ++RERL I+ D+      +V  D+
Sbjct: 197 ALKRYREIEKNGGWKTIEIDDAYKSLKLGDSSPIVSQIRERLFITQDIKEDNKSAVC-DS 255

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL---LEQKMGL 193
            +   +K +++ HG  P   +    +  +N+PV  RI+ + VN+ R + +   LE+  G 
Sbjct: 256 TLIKGLKSYELHHGFAPKNTILPEHITDLNIPVSDRIKTIIVNMERCRWIDPKLEK--GQ 313

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +Y+ VNIP   L  + + ++   S V+VG+   +T I    ++ I+F+PYW +P SII K
Sbjct: 314 QYIEVNIPEFKLYLIRDRQIAFTSPVVVGKAMTKTVIFSGTMSNIVFSPYWNVPPSIIAK 373

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           ++   + ++  YL   N+               +WN     N   RQ PGK N++   K 
Sbjct: 374 EIKPGMAKNKNYLAQKNL---------------EWN-----NGAVRQLPGKNNSLGLVKF 413

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F + +N Y+HDTP   LF    R  + GCVRV    +L + +LK+ P W+   I++ + 
Sbjct: 414 LFPNSSNIYLHDTPSKSLFERESRAFSHGCVRVAKPRELAIEILKEDPKWTEARIDKAMH 473

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             K +   +  + PV+  Y +AW  ++  + F  DIY  D
Sbjct: 474 AGKESWYTIKKKFPVYIGYFTAWVDREGNLNFYKDIYQRD 513


>gi|86138266|ref|ZP_01056840.1| peptidoglycan binding protein, putative [Roseobacter sp. MED193]
 gi|85824791|gb|EAQ44992.1| peptidoglycan binding protein, putative [Roseobacter sp. MED193]
          Length = 541

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 176/333 (52%), Gaps = 10/333 (3%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + + + GGW P +P   L  G++  +V  LR RLI  G ++ S   + ++D  +E AV+ 
Sbjct: 195 EQLQAAGGWGPTVPGNKLEPGDTGTNVVALRNRLIALGYMERSA--TASYDRDMERAVES 252

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL+  G+    TL+ +N PV  R++ + + + R ++ L    G R+VLVN    +
Sbjct: 253 FQADHGLEVDGVAGGGTLKEINRPVRDRLKSVIIAMER-ERWLTPDRGERHVLVNQTDFT 311

Query: 205 LEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            + ++NG V   +  ++G+   DR++P     +  ++ NP W +PRSII K+ +  LR +
Sbjct: 312 AKIIDNGDVTFETRSVIGKNQSDRRSPEFSDVMEHLVINPSWHVPRSIITKEYLPQLRNN 371

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P  +  ++I + D +G+ V    VD++     +F F  RQ P   NA+   K  F +++N
Sbjct: 372 PNAV--SHIQITDSRGRVVNRGSVDFSQYTARSFPFAMRQPPSTRNALGLVKFIFPNKHN 429

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP+  LF   VR  + GC+R+    +    LL             ++K+ K T V
Sbjct: 430 IYLHDTPQKSLFKREVRAFSHGCIRLAQPFEFAYALLAKQTEDPIDFFHRILKSGKETKV 489

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            L  +VPVH +Y +A+       +FR D+YG D
Sbjct: 490 DLEQQVPVHIIYRTAYVSNKGRAEFRRDVYGRD 522


>gi|4378168|gb|AAD19413.1| unknown [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 473

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 170/341 (49%), Gaps = 18/341 (5%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A  +  + +Y+ I  +GGWP +P    L +G+ +  V+ LR R+ I     P  G S  F
Sbjct: 131 AGLKNGLIYYRAIAEKGGWPVVPTGADLTVGSDNPRVKTLRRRIAIEDKELPDNG-SSHF 189

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA +++AVK  Q R+GL+P+G+V   TL+A+N PV  RI Q+  N+ R +  L + +   
Sbjct: 190 DAALKAAVKRAQQRYGLNPTGVVSGQTLQALNQPVKSRIHQIMANMERWR-WLPRNLPEN 248

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            + VN+ AA L   E  +  +    + GR   +TP+L S I  ++ NP W +P SI +K+
Sbjct: 249 RIQVNVAAAVLTLFEKNQPVMSMKSVTGRPGNETPMLRSTIYSLVINPPWNVPDSIAKKE 308

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
           +    +  P YL+     +I E G+   ++               Q PG  N++   K +
Sbjct: 309 LWPKEKAHPGYLQAAGFKIIGESGQGQRLQ---------------QKPGPRNSLGQLKFD 353

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           F +  + Y+HDTP    F+   R E+ GC+R+ + + L   LL   P W+   +   +  
Sbjct: 354 FPNSYSVYLHDTPGRGAFSRYGRLESHGCIRLEHPVALGERLLAADPAWTGDRLRSEIDK 413

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            +T  V+L   V V   Y +A+   ++ + FR + Y  D +
Sbjct: 414 NETERVRLKQPVAVFLFYWTAFGNGENALSFRSEPYKWDEL 454


>gi|238920326|ref|YP_002933841.1| peptidoglycan-binding domain 1 protein [Edwardsiella ictaluri
           93-146]
 gi|238869895|gb|ACR69606.1| peptidoglycan-binding domain 1 protein [Edwardsiella ictaluri
           93-146]
          Length = 544

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 10/329 (3%)

Query: 94  WPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAVKLFQMRHGL 151
           WP++P  P L  G+SS +V  LRE L+ SG L  + +G    +   + +AVK FQ   GL
Sbjct: 202 WPQMPGGPTLRPGDSSPAVAPLREILLRSGALPATDEGDGNVYTPALVAAVKRFQSGQGL 261

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            P G++   T   +NV   +R   L +N+ R++ LL   +    ++VNIP  S+     G
Sbjct: 262 TPDGVIGPRTYAWLNVTPSMRASLLALNIQRLR-LLPASV-YTGIMVNIPNYSMTYFREG 319

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           K  L S VIVGR  R+TP+++S +N ++ NP W +P  ++++D++    +DP Y + +  
Sbjct: 320 KDVLSSRVIVGRPARKTPLMNSELNNVVVNPPWNVPTKLVREDIVPKAMRDPGYFERHGY 379

Query: 272 HMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDT 326
            ++     +V V     +DW+S    NF +  RQ PG  N++   K    S++  Y+HDT
Sbjct: 380 TLLSGWSGDVQVINPYMLDWSSVSARNFPYRVRQAPGAGNSLGRFKFNMPSQDAIYLHDT 439

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LFN  +R  +SGCVR+     L   LL D   WS   +   ++   T  V +   +
Sbjct: 440 PNHALFNQDIRALSSGCVRINKASTLADMLLADA-GWSPERVASALQAGNTQYVPIRQRI 498

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           PV   Y + W       QFR DIY  D +
Sbjct: 499 PVRLYYQTVWVSDGGEPQFRTDIYNYDQL 527


>gi|307825667|ref|ZP_07655884.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
 gi|307733244|gb|EFO04104.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
          Length = 574

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 220/438 (50%), Gaps = 41/438 (9%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT----- 78
           L+L +  +  S+L   +++ ++  VN +  NF  ++      D+P++ K+++AQ      
Sbjct: 123 LALYDTALSISLL-RFLHDLHYGRVNPQGINFNLKLREKKLIDLPLLIKDSLAQNNLAQL 181

Query: 79  --------------EKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGD 123
                         ++A+A Y+ + +     +L ++  LH G S   +  LR  L   GD
Sbjct: 182 PLSLEPQFKQYQKLKQALANYRQLAAIAVPFKLDVKETLHPGESHPQIAELRRFLTTVGD 241

Query: 124 LDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L   K +      S+  DA V + VK FQ RHGL   G +   ++ A+NVP++ R+ QL+
Sbjct: 242 LPDDKTVISAEKSSLYTDAIV-TGVKAFQKRHGLTADGNIGKGSVAALNVPLNYRVTQLE 300

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN------GKVGLRSTVIVGR-VDRQTPI 230
           + + R++ L E  +G   ++VNIPA  L A ++        V +R  V+VG  +  QTP+
Sbjct: 301 LAMERLRWLPELNVGAS-IIVNIPAFQLWAFDSIDQPDANIVNMR--VVVGNALKTQTPV 357

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD 287
           L + ++ I F PYW +P SII+ +++  L Q+  YL   N+ M+    +  K   + +  
Sbjct: 358 LMAEMHFIDFMPYWNVPYSIIKNEILPKLIQNSNYLDKENMEMVSVFRDGEKPTALNQET 417

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
            N  +      RQ PG  NA+   K  F ++++ Y+HDTP   LF+   R  + GCVRV 
Sbjct: 418 MNLLKEGKLRIRQRPGGKNALGKVKFIFPNKDDVYLHDTPANALFSKSRRDFSHGCVRVA 477

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
           N   L  + LK+   W+   I+  + T K   V L   +PV F Y +A+  +   ++F  
Sbjct: 478 NPQKLAEFALKNQDNWNAETIQLAMNTPKMQRVILKKPIPVLFFYTTAFFDQYDNLEFYP 537

Query: 408 DIYGLDNVHVGIIPLPED 425
           DIYG D V +G +  P+D
Sbjct: 538 DIYGHDAVLLGALSKPDD 555


>gi|153000449|ref|YP_001366130.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS185]
 gi|151365067|gb|ABS08067.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS185]
          Length = 521

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 168/328 (51%), Gaps = 15/328 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G S   +  + +RL + GDL      ++ +   +   VK FQ RHGL   G++   T
Sbjct: 194 LTVGMSHPLLDTIAKRLWLLGDLAIEPMTNLVYSEELVVGVKRFQHRHGLKQDGVIGKQT 253

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           L  +N     R   L  N +R +++ E K+   Y+L+N+PA  +  V+NG   L S VIV
Sbjct: 254 LYWLNQSPKARAVLLAKNTIR-QRVFESKLEPSYLLINVPAFEMILVDNGTTVLNSKVIV 312

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G+  RQTP+L S+I+ ++ NP W +P SI+++D++  +R++  YL +    + D  G+ V
Sbjct: 313 GKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDILPQIRRNGHYLNERQFDVYDYNGQLV 372

Query: 282 FVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                +W      +F ++  Q PG  NA+   K  F +  + Y+H T EP LF+   R  
Sbjct: 373 QHMPEEWQGLASTSFPYQLVQRPGAKNALGKYKFHFDNSFSVYLHGTSEPSLFSKDDRAL 432

Query: 340 TSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTP--VKLATEVPVHFVYI 393
           +SGC+R+  + +L  W    L+KD   W +      +    T P    L+ ++PVH VY 
Sbjct: 433 SSGCIRIEKVTELAQWFKEHLVKDKRLWDK------LAPDVTEPQWFSLSQKLPVHLVYW 486

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           +AW       Q+R DIY L+      +P
Sbjct: 487 TAWLDDSEQEQYRSDIYHLEAELTNAVP 514


>gi|157375588|ref|YP_001474188.1| peptidoglycan binding domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157317962|gb|ABV37060.1| peptidoglycan-binding domain 1 protein [Shewanella sediminis
           HAW-EB3]
          Length = 465

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 166/326 (50%), Gaps = 18/326 (5%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           GGW       L  G+   S+  +  RL + GDLD     +   +  + +++  FQ RHGL
Sbjct: 139 GGW-------LKEGDYHKSIPEISFRLNMLGDLDSYDRNNKQLNRTLATSLLRFQRRHGL 191

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
               ++   TL  +N     R R L  N ++    L   +  R++L+NIPA  +  V++ 
Sbjct: 192 KQDAIIGPETLRWLNASPKNRARLLANNFLKKSSYLA-SLDSRFLLINIPAFEMVLVDHD 250

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           ++ L+S VIVG+  RQTP+L S+I+ ++ NP W +PR ++ +D++  +R++  Y+   N 
Sbjct: 251 EIQLKSRVIVGKPYRQTPMLSSQISNVVLNPSWRVPRRLLWRDLLPKVRENGSYITQRNF 310

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            + D KG  +     +W       F +R  Q PG+ N +   K  F +  N Y+HDT + 
Sbjct: 311 DVFDAKGVIIEKSPDEWQELAQGRFPYRLVQRPGEENTLGRYKFYFANDYNVYLHDTVDK 370

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
            LF    R  +SGC+RV N+  L  W    L++D  TW    ++  V+ +KT    L   
Sbjct: 371 SLFEESNRALSSGCIRVENVESLANWMASNLVRDKQTW----VDMQVERQKTQWFSLDDS 426

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYG 411
           + VH VY +AW   +   QFR+DIY 
Sbjct: 427 LAVHLVYWTAWIDSEGDSQFRNDIYN 452


>gi|269102898|ref|ZP_06155595.1| L,D-transpeptidase YcbB [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162796|gb|EEZ41292.1| L,D-transpeptidase YcbB [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 582

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/338 (32%), Positives = 173/338 (51%), Gaps = 14/338 (4%)

Query: 89  LSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVES---A 141
           LS   WP   +   + LGN   + + L   L + GDL   +    L+   D    +   A
Sbjct: 232 LSHKRWPIFHVANKVSLGNPLPNAKNLITILEMLGDLPSYQAEQMLTENLDYLSPTLIEA 291

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           VK FQ RHGL P G++  +TL  ++     R+R + +N +R+    +++     ++VNIP
Sbjct: 292 VKSFQQRHGLSPDGVIGPNTLYWLSKSPQERLRVVALNTLRLSLWPDEQPNQ--IVVNIP 349

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           A  L A  N +  + S VIVGR  R TP++ S I  ++FNPYW +P SI++KD++  +++
Sbjct: 350 AYELTARLNNQSVMTSKVIVGRPSRNTPMMDSTITSVVFNPYWNVPTSIMRKDILPKVKR 409

Query: 262 DPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYS 317
           +P YL  N   ++        + V  ++W    P  F +  RQ PG  NA+   K    +
Sbjct: 410 NPSYLTRNRYEILSSWSNPARISVNAINWRGVNPKTFPYRLRQKPGNKNALGRFKFNIPN 469

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
               Y+HDT    LFN   R  +SGCVRV     L   LL+ +    +  I+   +TR  
Sbjct: 470 DYAIYLHDTSSKRLFNKSDRALSSGCVRVEYAKGLAQLLLEYSGVSDKRFIQYSSRTRTK 529

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           T V L  ++PVH +Y +AW+  + +I +RDDIY  D +
Sbjct: 530 T-VVLKNKIPVHLIYQTAWAEGNGLIYYRDDIYHYDKM 566


>gi|327478928|gb|AEA82238.1| putative periplasmic protein [Pseudomonas stutzeri DSM 4166]
          Length = 526

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 170/320 (53%), Gaps = 11/320 (3%)

Query: 93  GWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
            W  LP  P L  G        LRE L+      P+  L + +D  +  AV+ FQ++HGL
Sbjct: 202 AWRPLPSGPTLRPGMRDERSPLLRELLLAGAGSAPA--LDLRYDDELVEAVRGFQLQHGL 259

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  G+V ++TL A+NV    R+ QL++NL R++  + + +  + +LV+I  A L    + 
Sbjct: 260 EADGVVGAATLAALNVSPASRLDQLRINLERLR-WISRDLEPQSLLVDIAGARLIYFRDS 318

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
               ++   VGR  RQTP L SRI+R+  NP W +P +I+++D + L+R+D  YL  + +
Sbjct: 319 CPFWQTRTQVGREARQTPPLKSRISRLTLNPTWTVPPTILKQDKLPLIREDIAYLARHQM 378

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            +ID +G  V    VDW +P     + RQD G  N +    I F +  + Y+HDTP   L
Sbjct: 379 RVIDAQGNAVDPYAVDWANPR--GILLRQDAGPANPLGQVAIRFANPFSVYLHDTPSKPL 436

Query: 332 FNNVVRFETSGCVRVRNIIDL-DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           F    R  +SGCVRV + + L D+ L  D     R  +  ++++ +T   +LA + P+  
Sbjct: 437 FERAARAVSSGCVRVESALQLVDLLLEAD----ERDTVARLLQSGETHEYRLARQTPILM 492

Query: 391 VYISAWSPKDSIIQFRDDIY 410
            Y +A +    + ++R DIY
Sbjct: 493 AYWTADADDSGLPRYRPDIY 512


>gi|126663199|ref|ZP_01734197.1| hypothetical protein FBBAL38_07595 [Flavobacteria bacterium BAL38]
 gi|126624857|gb|EAZ95547.1| hypothetical protein FBBAL38_07595 [Flavobacteria bacterium BAL38]
          Length = 529

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 182/361 (50%), Gaps = 21/361 (5%)

Query: 70  ISKETIAQTEKAI--------AFYQDILSRGGWPELPIRPLHLGNSSV------SVQRLR 115
           I ++TIA T  A+        +  + +L     P +  + + + N  +       + +++
Sbjct: 162 IKEKTIASTFNALKPNHIVYKSLKKSLLEINKLPNISFQKIEIKNKIILNDTLPEMVKIK 221

Query: 116 ERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           +RL    D      L +  +D     AVK FQ RHGL   G++   T++A+N   + RI 
Sbjct: 222 KRLAYWKDYKNKDSLITWVYDTITYKAVKRFQARHGLAQDGVIGIGTIKALNTTKNERIE 281

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           Q+  NL R K      +G  Y++ NIP   L  V N     +  ++VG   R+TPIL S+
Sbjct: 282 QIFANLERWK-WYPFDLGEEYLIANIPEYMLNYVTNNDTVAKYRIVVGTKKRKTPILTSK 340

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++  +FNP W IP +II++D+     ++  Y    ++ + + KG EV  EE  WN  +  
Sbjct: 341 LSNFVFNPTWTIPPTIIKEDLTPAASKNRNYFPSRSLTIYNNKGTEVSPEE--WNPAKAN 398

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL-- 352
           ++ + Q PG  N++   K+ F +R++ Y+HDT     F+   R  +SGCVRV   + L  
Sbjct: 399 SYRYVQKPGYNNSLGLVKLNFLNRHSVYLHDTNHRDYFSKTYRSLSSGCVRVETPLVLVK 458

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
            + +  +   WS   I+ ++K  KT  V +   V ++  Y ++W  +++ +QFR+DIY L
Sbjct: 459 QILVKSNQEKWSGSEIDSIIKLEKTKTVSIKDTVNIYIFYWTSWF-ENNKLQFREDIYDL 517

Query: 413 D 413
           D
Sbjct: 518 D 518


>gi|56696802|ref|YP_167164.1| peptidoglycan binding protein, putative [Ruegeria pomeroyi DSS-3]
 gi|56678539|gb|AAV95205.1| peptidoglycan binding protein, putative [Ruegeria pomeroyi DSS-3]
          Length = 537

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 10/333 (3%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           +  L+ GGW P +    L  G+    V  LR RLI  G +D S     ++D  ++ AV+ 
Sbjct: 191 EQALATGGWGPTVAGGKLAPGDGGPRVVALRNRLIAMGFMDRSA--VASYDGTLQKAVQA 248

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ+ HGL+  G+    TL+ +N  V  R++ + V L R ++ L +  G R++LVN    +
Sbjct: 249 FQLAHGLEADGVAGDGTLDEINKSVADRLKSVIVALER-ERWLPRDRGERHILVNQTDFT 307

Query: 205 LEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            + V++G+V   +  ++G+   DR++P     +  ++ NP W +PRSII K+ +  LR +
Sbjct: 308 AKIVDHGRVTFETRSVIGKNVSDRRSPEFSDEMEHMVINPSWYVPRSIITKEYLPKLRAN 367

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P  ++  ++ + D +G++V    VD++     +F F  RQ PGK NA+   K  F ++ N
Sbjct: 368 PNAVR--HLEITDSRGRQVNRGAVDFSQFSSRSFPFAMRQPPGKSNALGLVKFMFPNKYN 425

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP+  LF   VR  + GC+R+    +    LL       +     V+ T + T V
Sbjct: 426 IYLHDTPQKDLFAREVRAYSHGCIRLAQPFEFAYALLALQEADPKSFFHNVLNTGRETKV 485

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            L   VPVH +Y +A         +R D+YG D
Sbjct: 486 DLERHVPVHIIYRTAVVDDRGQAGYRRDVYGRD 518


>gi|85702799|ref|ZP_01033903.1| peptidoglycan binding protein, putative [Roseovarius sp. 217]
 gi|85671727|gb|EAQ26584.1| peptidoglycan binding protein, putative [Roseovarius sp. 217]
          Length = 541

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 177/332 (53%), Gaps = 10/332 (3%)

Query: 88  ILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           +++ GGW   +P   L  G++  SV  LR RLI  G +  ++  S  +DA ++ AV+ FQ
Sbjct: 197 LIALGGWGGAVPAETLRPGDTGQSVVALRNRLIAMGYV--TRSASQTYDARLQQAVQAFQ 254

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
             HGLD  G+   +T+ A+N     R++ + V + R + L E + G R++LVN+   S  
Sbjct: 255 TDHGLDADGVAGGATMAALNTSASERLKSVIVAMERERWLTEDR-GTRHILVNLTDFSAR 313

Query: 207 AVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
            ++N +V   +  ++G+ D  R++P     +  ++ NP W +P SI   + +  ++++P 
Sbjct: 314 ILDNDQVTFATRAVIGKNDAGRRSPEFSDEMEHMVVNPTWHVPYSIAVNEYLPQMQRNPG 373

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTY 322
               +++ + +  G+EV    V++ +    NF F  +Q P + NA+   K  F ++ N Y
Sbjct: 374 --AASHLKLYNRNGREVSRGAVNFGAYNARNFPFAIKQPPSERNALGLVKFMFPNKYNIY 431

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDTP+  LF+   R  + GC+R+    D    LL    +  + + + V+ TR+ T V+L
Sbjct: 432 LHDTPQKALFDLEKRDFSHGCIRLHQPFDFAYALLAKQESDPQAYFKSVLDTRRETYVQL 491

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              VPVH +Y +A++      Q+R D+YG D 
Sbjct: 492 EQHVPVHIIYRTAFTQAQGRPQYRGDVYGRDG 523


>gi|300716096|ref|YP_003740899.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299061932|emb|CAX59048.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 616

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 150/285 (52%), Gaps = 8/285 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           + A +  AVK FQ   GL+P G +   T E +NV   LR   L +N+ R++ LL   M  
Sbjct: 317 YSAELVEAVKRFQRWQGLEPDGAIGPRTREWLNVSPQLRASLLALNIQRLR-LLPDDMH- 374

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIP  SL    NG   L S VIVGR DR+TP++ S +N ++ NP W +P +++++
Sbjct: 375 NGIMVNIPNYSLIYYLNGSQILASRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVRQ 434

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAM 308
           D++  ++QDP YL  +N  ++     +  V     +DW      +F +  RQ PG  N++
Sbjct: 435 DIVPKVKQDPAYLYKHNYTLLSGWSNDAEVIDPSMIDWRMVSAASFPYRIRQAPGATNSL 494

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   I
Sbjct: 495 GRYKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANLLLQDA-GWNDTRI 553

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +K   T  V +   +PV+  Y++AW   D   Q+R DIY  D
Sbjct: 554 SSTLKEGDTRYVPIRHRIPVNLYYLTAWVADDGKAQYRTDIYNYD 598


>gi|238749753|ref|ZP_04611258.1| Peptidoglycan-binding domain 1 protein [Yersinia rohdei ATCC 43380]
 gi|238712408|gb|EEQ04621.1| Peptidoglycan-binding domain 1 protein [Yersinia rohdei ATCC 43380]
          Length = 622

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/357 (32%), Positives = 177/357 (49%), Gaps = 16/357 (4%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
           P+ + ETI +    IA   D LS     E      H    S S   + +  I    + P+
Sbjct: 253 PVKTAETIPEDNPTIAAVNDDLSVDE--EKSRSQAHSLVVSPSAAPVADEPIAGEAIAPA 310

Query: 128 KGLSVA------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
              S A      +   +  AVK FQ+ HGL   G++ + T E +NV    R   L +N+ 
Sbjct: 311 APTSTATVTDNVYTPELVEAVKRFQLWHGLSDDGIIGARTREWLNVSPQTRATLLALNIQ 370

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++ +L  ++    ++VNIP  SL   +NG+  L S VIVGR  R+TP++ S +N ++ N
Sbjct: 371 RLR-ILPGRVD-NGIMVNIPNYSLNYYKNGEQVLSSRVIVGRPSRKTPLMSSALNNVVVN 428

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF 298
           P W +P S+I++D++   R D  Y + +   ++     +  V   E +DW+   P +F +
Sbjct: 429 PPWNVPTSLIRQDILPKARYDSSYFQRHGYTVLSGWNNDAEVVDPEMIDWSMISPNHFPY 488

Query: 299 --RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             RQ+PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   L
Sbjct: 489 RLRQEPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANML 548

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L+D   W+   +   +K   TT V +   VPV   Y++AW  +D   QFR DIY  D
Sbjct: 549 LQDV-GWNDARVSSTLKQGSTTYVNIRERVPVQLYYLTAWVAEDGKPQFRTDIYNYD 604


>gi|192359326|ref|YP_001983485.1| cell wall degradation protein [Cellvibrio japonicus Ueda107]
 gi|190685491|gb|ACE83169.1| cell wall degradation protein [Cellvibrio japonicus Ueda107]
          Length = 746

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/288 (34%), Positives = 149/288 (51%), Gaps = 4/288 (1%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FD Y+  AVK FQ    L+  G +  +T  A+NV    R+ Q++VNL R + LL   +  
Sbjct: 458 FDEYLVEAVKTFQREQYLEVDGAIGPATRAALNVSAKTRLEQIRVNLDRARWLL-HSIPP 516

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             VLV+I    +   +  +   RS V VG   R +P+  S +N I  NP W +P +I++K
Sbjct: 517 EMVLVDIAGFKVTYFKASQPIWRSRVQVGMAYRTSPLFRSEVNYITLNPTWTVPPTILRK 576

Query: 254 DMMALLRQ-DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           D++  LR+ D  YL+DN I +++ +G+E+    +DW  P       RQD G   A+    
Sbjct: 577 DILPKLRKGDLSYLRDNRIRVLNRQGQELDPASIDWQRPG--AITLRQDAGPKAALGKAV 634

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
           I F + +  Y+HDTP   LF    R  +SGC+RV   ++L   LL DTP W    IE+ +
Sbjct: 635 IRFPNSHAVYLHDTPHQRLFEKSQRAFSSGCIRVERALELVQLLLSDTPGWDAAAIEKAL 694

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            T  T  V LA  VP+   Y +A    +  + F+ DIY  D V +  +
Sbjct: 695 ATGNTRNVILARRVPILLAYWTADVIDEHKVVFKPDIYARDPVLLAAL 742


>gi|312887097|ref|ZP_07746701.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311300409|gb|EFQ77474.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 550

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 174/332 (52%), Gaps = 19/332 (5%)

Query: 85  YQDILSRGGWPELPIRPLHL--GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           Y+ + +   W  +  + ++L  G++S +++ ++ RL+   D       + ++DA +  AV
Sbjct: 220 YRSLDAADEWKPVDTKSVNLKPGDTSAAIKEIKIRLLRLQDFQ-GDTFNESYDADLIIAV 278

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           K FQ R+GLD SG ++  T+ AMNVP+ +RI+Q+ VN+ R  + L   +   ++ VNIP 
Sbjct: 279 KQFQYRNGLDTSGRLNKETIMAMNVPLKIRIKQILVNMER-ARWLPVSLNADFLAVNIPE 337

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            +L       +     V+VG+   QT I +  I  ++F+PYW IP+SI++ +++  L++ 
Sbjct: 338 FTLHVYHADSLLWSCPVVVGQKVHQTSIFYGEIKYVVFSPYWNIPQSIVRAEVVPGLKKS 397

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
           P YL  + + +   K             P     I RQ PG  N++   K  F +  N Y
Sbjct: 398 PDYLLRHQMEITGYKE----------GLP-----IVRQKPGPENSLGLVKFLFPNSYNIY 442

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDTP+  LF    R  + GC+R+     L  +LLK+   WS   I+  + + K   V L
Sbjct: 443 LHDTPKKSLFGETTRDFSHGCIRIMEPAKLAAFLLKNHNKWSGIKIKRAMNSGKEQYVSL 502

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             +VPV   Y +A++ +  ++ FR DIY LD+
Sbjct: 503 EHKVPVFITYFTAFTDRRGLLNFRKDIYSLDD 534


>gi|261344276|ref|ZP_05971920.1| putative peptidoglycan binding domain protein [Providencia
           rustigianii DSM 4541]
 gi|282567879|gb|EFB73414.1| putative peptidoglycan binding domain protein [Providencia
           rustigianii DSM 4541]
          Length = 575

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 171/338 (50%), Gaps = 26/338 (7%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLD-------------PSKGLSVAFDAYVES-----A 141
           + L  G +S  V  LRE L+  G LD             P +   V  +A V +     A
Sbjct: 224 KALKPGQASDDVITLREILVRDGLLDASVIGEAIDASAPPEEIAKVTANARVYNDELVEA 283

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           VK FQ+++GL+  G++   T   +N+    +   + +N+ R++ ++ +  G   +LVNIP
Sbjct: 284 VKKFQLQYGLEADGVIGRGTRVWLNMQPKQKAGLMALNIQRLR-IVPESSGTG-ILVNIP 341

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           A +L+   N ++ L S VIVGR DR+TPI+ S +N ++ NP W +P S+ +KD+    + 
Sbjct: 342 AYTLDFYLNNEIILDSKVIVGRADRKTPIMSSALNNVVINPPWSVPTSLARKDIAPKGKV 401

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEFY 316
           DP Y       +    G++ +  +   +DW +  P NF +  RQ PG  N++   K    
Sbjct: 402 DPSYFSRKGYTVYSGWGQDAYEVDPYSIDWENMSPANFPYRIRQAPGPTNSLGRYKFNMP 461

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           S +  Y+HDTP   LFN   R  +SGCVRV    +L   LL D   W++  I+  +K   
Sbjct: 462 SSDAIYLHDTPNHSLFNKNARAISSGCVRVNKASELATILLGDA-GWAQTRIDGALKDGS 520

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           T  V +   +PV+  Y +AW  KD   Q+R DIY  D 
Sbjct: 521 TRYVNIPDRIPVYLYYQTAWVDKDQQPQYRADIYQYDG 558


>gi|121606474|ref|YP_983803.1| peptidoglycan-binding domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120595443|gb|ABM38882.1| Peptidoglycan-binding domain 1 protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 525

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 182/360 (50%), Gaps = 29/360 (8%)

Query: 76  AQTEKAIAFYQDILSRGGW----PELP---IRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           AQ  +A+A Y++ ++   W    P LP      L  G S   +  L ERL   GD+ P  
Sbjct: 155 AQLREALARYRERVNHPAWRQPLPRLPGGKAGKLAPGQSYAGLALLAERLTALGDMAPGL 214

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK--KL 186
            L   ++  +  A K FQ RHGL   G++  +TL  + V    R+RQ+++ L R++   L
Sbjct: 215 PLPARYEGPLVDAAKAFQQRHGLAADGVIGKTTLAQLQVMPAARVRQIELALERLRWTPL 274

Query: 187 LEQKMGLRYVLVNIPAASLEA--VENGKVGLRS--TVIVGR-VDRQTPILHSRINRIMFN 241
           L+   G R ++VNIP   L A  V++G++ ++    ++VG+ +D +TP+    +  I F+
Sbjct: 275 LQ---GPRMIVVNIPEFVLRAYEVQDGQIHVQQEMKIVVGKALDTRTPLFDEDMRFIEFS 331

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK------EVFVEEVDWNSPEPPN 295
           PYW +P SI + +++  LR+DP YL   N+  +   G+         +E V         
Sbjct: 332 PYWNVPPSIARAEIVPRLRRDPGYLARENMEFVSAGGRVDKTVSAGLLEAVLAGQSR--- 388

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
              RQ PG  NA+   K  F + +N Y+H TP   LF    R  + GC+RV + + L  +
Sbjct: 389 --IRQRPGPKNALGDIKFVFPNSDNIYLHHTPATQLFERARRDFSHGCIRVEHPVALAKF 446

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           +LK+ P W+   I+  +   ++  ++LA  VPV   Y +    KD    F DDIYGLD +
Sbjct: 447 VLKNMPEWTPERIQNAMSRGESATLRLAEPVPVLIAYGTTLV-KDGRTFFFDDIYGLDRL 505


>gi|126736346|ref|ZP_01752088.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           CCS2]
 gi|126714167|gb|EBA11036.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           CCS2]
          Length = 536

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 10/334 (2%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + ++ +GGW P +P R    G+S   V  LR RLI  G L  +   +  +D  +  A+  
Sbjct: 190 ERLIGQGGWGPTVPGRKYERGDSGAGVVALRNRLIAMGYLPRTN--TQTYDDAIYGAITR 247

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL   G   + TL+ +NV  + R+R + V + R ++ + +  G R+V VNI   +
Sbjct: 248 FQQAHGLAIDGTAGAGTLDEINVQPEARLRSIIVAMER-ERWINRPRGERHVWVNITDFT 306

Query: 205 LEAVENGKVGLRSTVIVGRVDRQ--TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            +  +NG     +  +VG  DR   TP     +  ++ NP W +PRSII K+ +  L+ +
Sbjct: 307 AKIYDNGVETFSTRSVVGARDRDRVTPEFSDVMEFMVINPSWYVPRSIITKEFLPQLQAN 366

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF--IFRQDPGKINAMASTKIEFYSRNN 320
           P  ++  N+ + D  G+ V     D++   P NF   FR+ P + NA+   K  F +R N
Sbjct: 367 PNAVR--NLVITDRNGRVVDRSTADFSQYTPTNFPYSFREPPSQGNALGLVKFMFPNRYN 424

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF    R  + GCVR+ +  D    LL           +  +++ +   V
Sbjct: 425 IYLHDTPSKSLFGRETRAYSHGCVRLADPFDFAYALLARQVGNPEEVFQGHLRSGRERRV 484

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L T VPVH VY +A  P D  +QFR D+YG D 
Sbjct: 485 DLETPVPVHLVYRTAIVPADGKVQFRRDVYGRDG 518


>gi|110637821|ref|YP_678028.1| hypothetical protein CHU_1417 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280502|gb|ABG58688.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 568

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 187/352 (53%), Gaps = 29/352 (8%)

Query: 82  IAFYQ---------DILSRGGW--PELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           IAFY          D L   G+   E+P   + L  G++S  +  +++RL  + +   ++
Sbjct: 217 IAFYASLQTALINADSLEANGFTSKEIPYIGKKLVKGDTSFVILEVKKRLQATTEYSFNE 276

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKKLL 187
            L+  FD  +  +VK+FQ   GL  +G++D +TL  +N  P  +R   ++ N+ R +   
Sbjct: 277 -LNNVFDEQLFQSVKIFQEHVGLHGTGVIDKTTLAKLNYTPAQIR-NTIRANMERCR-WF 333

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             ++   Y+LVNIP  +L   +NGKV    TVIVG+   QTP+  + I+ + FNPYW +P
Sbjct: 334 SNELPNEYILVNIPDYTLSHFKNGKVIYNETVIVGKQLNQTPVFQATISNVEFNPYWTVP 393

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV-----FVEEVDWNSPEPPNFIFRQDP 302
           RSI  K+++  L++DPQYL+ +N+ ++ E  KE+     F    D   P    F  ++ P
Sbjct: 394 RSIAVKEILPSLKKDPQYLEKHNMFLM-EGDKEIASPPSFAGYSDSYFP----FTIKEKP 448

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K  F +  + YMHDTP   LF+N VR  + GC+R+ N +     LL     
Sbjct: 449 GPKNSLGQVKFSFPNPYSIYMHDTPAKYLFDNDVRSYSHGCIRLHNPLKFADHLLSQQGV 508

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK-DSIIQFRDDIYGLD 413
             +  I+E+V++ K   + L T++P+   Y + ++ K D+ + F  D+Y  D
Sbjct: 509 TEK-RIDEIVQSEKNYVMALETKMPIMISYFTCYTKKGDNRLYFFYDVYDSD 559


>gi|317047572|ref|YP_004115220.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
 gi|316949189|gb|ADU68664.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
          Length = 602

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 154/295 (52%), Gaps = 8/295 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           +P +  +  +D  +   VK FQ   GL   G +   T E +NV   +R   L +N+ R++
Sbjct: 294 NPVQSANNVYDNALVEGVKRFQHWQGLADDGAIGPRTREWLNVSPQMRAALLALNIQRLR 353

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            LL   M    ++VNIP  SL    NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 354 -LLPDDMH-NGIMVNIPNYSLTYYNNGATILSSRVIVGRPDRKTPLMRSALNNVVLNPPW 411

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--R 299
            +P S++++D++  ++QDP YL  +   ++     +  V     +DWN     +F +  R
Sbjct: 412 NVPTSLVRQDIVPKVKQDPGYLYKHGYTLLSGWSADAQVIDPSSLDWNMVSAASFPYRIR 471

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG +N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D
Sbjct: 472 QAPGAMNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELADLLLQD 531

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              W+   I + +K   T  V +   +PV+  Y++AW   D   Q+R DIY  DN
Sbjct: 532 A-GWNDSRISDTLKEGNTRYVPIRHRIPVNLYYLTAWVADDGQPQYRTDIYNYDN 585


>gi|238785818|ref|ZP_04629788.1| Peptidoglycan-binding domain 1 protein [Yersinia bercovieri ATCC
           43970]
 gi|238713271|gb|EEQ05313.1| Peptidoglycan-binding domain 1 protein [Yersinia bercovieri ATCC
           43970]
          Length = 606

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/279 (35%), Positives = 147/279 (52%), Gaps = 8/279 (2%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +AVK FQ+ HGL   G++ + T E +NV    R   L +N+ R++ L  Q      ++VN
Sbjct: 313 AAVKRFQLWHGLSDDGVIGARTREWLNVSPQTRATLLALNIQRLRILPGQVDN--GIMVN 370

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P S++++D++   
Sbjct: 371 IPNYSLNYYKNGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKA 430

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIE 314
           R D  Y + +   ++     E  V +   +DW+   P NF +  RQ PG  N++   K  
Sbjct: 431 RYDAGYFQRHGYTVLSGWSNEAEVVDPSMIDWSMISPNNFPYRLRQAPGASNSLGRFKFN 490

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +   +K 
Sbjct: 491 MPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDARVSSTLKQ 549

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             TT V +   VPV   Y++AW   D   QFR DIY  D
Sbjct: 550 GDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDIYNYD 588


>gi|328544358|ref|YP_004304467.1| peptidoglycan binding domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326414100|gb|ADZ71163.1| Putative peptidoglycan binding domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 543

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 156/327 (47%), Gaps = 6/327 (1%)

Query: 92  GGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GG+  +P    L  G S   +  LR R+     L P       +D  +  AVK FQ  HG
Sbjct: 207 GGFTPVPDGAVLKPGMSDPRLDVLRRRMEQQDYLAPGAHAGDVYDGALVEAVKTFQDYHG 266

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G+V   TL  MNVP+  R+ Q+++N+ R ++ +   +G  YV VN+   +L+ V +
Sbjct: 267 LAVDGVVGKDTLAEMNVPIGRRLIQMELNMER-RRWMPDDLGEAYVFVNLADQNLKVVRD 325

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           GK    + V+VG+    TP+    +  +  NPYW +P SI   + +  L  +P+ L   N
Sbjct: 326 GKTVHTARVVVGKPYHATPVFSKDMTYVEVNPYWNVPPSIATNEYLPKLISNPRALDGQN 385

Query: 271 IHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           I +      EV   ++ W   S  P  F  RQDPG  NA+   K  F +  N Y+HDTP 
Sbjct: 386 IRVFSGDA-EVSPHQIAWASYSGGPFPFKLRQDPGDGNALGRIKFMFPNEFNIYIHDTPS 444

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  + GC+RV +   L   LL D     R  ++    +     + L   +PV
Sbjct: 445 RALFERAQRSFSHGCIRVSDPFALAEVLLADQ-GLDRAALDRAKASGDRQVITLRRPIPV 503

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNV 415
           H  Y++AW  KD    FR DIYG D V
Sbjct: 504 HLTYLTAWMNKDGSTHFRKDIYGRDEV 530


>gi|238753519|ref|ZP_04614882.1| Peptidoglycan-binding domain 1 protein [Yersinia ruckeri ATCC
           29473]
 gi|238708472|gb|EEQ00827.1| Peptidoglycan-binding domain 1 protein [Yersinia ruckeri ATCC
           29473]
          Length = 620

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/292 (35%), Positives = 151/292 (51%), Gaps = 11/292 (3%)

Query: 130 LSVAFDAYVE---SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           LSV  + Y E   +AVK FQ   GL   G++   T E +NV   +R   L +N+ R++ L
Sbjct: 314 LSVTDNQYGEELVAAVKRFQQWQGLTDDGVIGPRTREWLNVSPQMRASLLALNIQRLRIL 373

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             Q      ++VNIP  SL    NG   L S VIVGR  R+TP++ S +N ++ NP W +
Sbjct: 374 PGQVT--TGIMVNIPNYSLSYYLNGTEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNV 431

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQD 301
           P S+I++D+M   R D  Y + +   ++   G +        +DW+   P +F +  RQ+
Sbjct: 432 PISLIRQDIMPKARNDASYFQRHGYTVLSGWGNDAEAINPSMIDWSLISPNHFPYRLRQE 491

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D  
Sbjct: 492 PGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLASMLLQDA- 550

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            W+   +   +K   TT V +   +PV   Y++AW  +D   QFR DIY  D
Sbjct: 551 GWNNERVSSTLKQGNTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYD 602


>gi|238795867|ref|ZP_04639380.1| Peptidoglycan-binding domain 1 protein [Yersinia mollaretii ATCC
           43969]
 gi|238720330|gb|EEQ12133.1| Peptidoglycan-binding domain 1 protein [Yersinia mollaretii ATCC
           43969]
          Length = 574

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/278 (35%), Positives = 148/278 (53%), Gaps = 8/278 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ+ HGL   G++ + T E +N+    R   L +N+ R++ +L  K+    ++VNI
Sbjct: 282 AVKRFQLWHGLSDDGVIGARTREWLNISPQTRATLLALNIQRLR-ILPGKVD-NGIMVNI 339

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P S++++D++   R
Sbjct: 340 PNYSLNYYKNGTEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKAR 399

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
            D  Y + +   ++     E  V +   +DW+   P NF +  RQ PG  N++   K   
Sbjct: 400 YDAGYFQRHGYTVLSGWSNEAEVVDPSMIDWSMISPNNFPYRLRQAPGASNSLGRFKFNM 459

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +   VK  
Sbjct: 460 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDARVSSTVKQG 518

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            TT V +   VPV   Y++AW   D   QFR DIY  D
Sbjct: 519 DTTYVNIRQRVPVQLYYLTAWVADDGRPQFRTDIYNYD 556


>gi|146299088|ref|YP_001193679.1| hypothetical protein Fjoh_1328 [Flavobacterium johnsoniae UW101]
 gi|146153506|gb|ABQ04360.1| Uncharacterized protein [Flavobacterium johnsoniae UW101]
          Length = 539

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 166/335 (49%), Gaps = 27/335 (8%)

Query: 85  YQDILSRGGWPELPI-----RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           Y++I   G W ++ I     + L   +S   VQ++RERL + GDL      S  +D  + 
Sbjct: 211 YRNIEKNGLWKKIEIDEANYKELKPLDSGKVVQQIRERLFVVGDLKEDSK-SQYYDQEMM 269

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYVLV 198
            AV  ++ R+GL  +       ++ MN P+  RIR + +N+ R + +  +      YV+V
Sbjct: 270 DAVLKYKKRYGLKLNYTFTKEQIDQMNEPISNRIRTIMLNMERCRWIPTKLAKADEYVMV 329

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           NIP+  L  V++GK  L S V VG    +T I    I+RI+F+PYW +P SII+ ++   
Sbjct: 330 NIPSFRLIYVKDGKYDLVSDVFVGTRMTETVIFSGNIDRIVFSPYWYVPASIIKNELKLK 389

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
           + +D  YL D+N+               +WN         RQ PG  N++   K  F + 
Sbjct: 390 MAEDKNYLADHNM---------------EWNGGS-----VRQKPGPNNSLGLVKFMFPNP 429

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           N+ Y+HDTP   LF+   R  + GC+ VR+   L + +LKD P W    I + +   K T
Sbjct: 430 NDIYLHDTPAKSLFDFEKRTFSHGCINVRDAKKLALEILKDNPDWPVDKINDAMSGEKET 489

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              L  ++P++  Y +AW   D  I F  D+Y  D
Sbjct: 490 TCMLKNKIPIYIGYFTAWVTDDGEIGFYPDVYDRD 524


>gi|146311101|ref|YP_001176175.1| hypothetical protein Ent638_1444 [Enterobacter sp. 638]
 gi|145317977|gb|ABP60124.1| Peptidoglycan-binding domain 1 protein [Enterobacter sp. 638]
          Length = 607

 Score =  166 bits (420), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 156/289 (53%), Gaps = 7/289 (2%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
           G   A+D  + +AVK FQM  GL   G++  ST + +NV    R   L +N+ R++ LL 
Sbjct: 304 GKPAAYDRELVAAVKTFQMTQGLGADGVIGPSTRDWLNVSPAQRAGVLALNIQRLR-LLP 362

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
             +    ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P 
Sbjct: 363 GTLSTG-IMVNIPAYSLVYYQNGSEVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPP 421

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGK 304
           ++ +KD++  L  DP YL+ +   ++        ++  +VDW +  P N  F F+Q PG+
Sbjct: 422 TLARKDILPKLWDDPGYLERHGYTVMRGWNSSQAIDPYQVDWATITPSNLPFRFQQAPGE 481

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL D   W+
Sbjct: 482 RNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDARALSSGCVRVNKASELANMLLGDA-GWN 540

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              I + +K   T  V +   +PV+  Y++A+  +D   Q+R DIY  D
Sbjct: 541 DTRISDTLKEGNTRYVNIRHNIPVNLYYLTAFVGEDGRTQYRTDIYNYD 589


>gi|24373464|ref|NP_717507.1| hypothetical protein SO_1899 [Shewanella oneidensis MR-1]
 gi|24347755|gb|AAN54951.1|AE015633_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 571

 Score =  166 bits (419), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 188/362 (51%), Gaps = 21/362 (5%)

Query: 77  QTEKAIAFYQDILSRGGWPELP----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           Q ++ +A Y+D+ +R  +  +P    I+P   G +S S++ +  RL   G LD +  +  
Sbjct: 200 QLKQYLAHYKDLAARYPFTTIPYTEVIKP---GTTSPSIKGIAARLKEQGYLDANATVQD 256

Query: 133 A---------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           A         +D  +E+A++ FQ  H L   G++ + T+ A+NVP   R+ Q+++NL R 
Sbjct: 257 ATLVANAPLLYDNILEAAIRQFQADHSLKADGVIGAGTMAALNVPYAQRVEQIRINLER- 315

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L   +   Y++VN+    L   ++  +  R+ +I+G++D +TP+  S++  ++ NP 
Sbjct: 316 ARWLSANLSANYLIVNLAGYELLLFKDNNLSWRTDIIIGKIDSKTPLFKSKLKYVVVNPT 375

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF--IFRQD 301
           W +P SI   +++   R+DP YL   +  +++  G  V    +DW+S    NF   F Q+
Sbjct: 376 WTVPNSI-STEIINHQRKDPDYLHKKHFKVVESSGTPVDASGIDWHSMTRKNFPYWFVQE 434

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K  F ++ + Y+HDTP   LF+   R  + GC+RV++ + L   LL    
Sbjct: 435 PGADNSLGLVKFIFPNQYSIYLHDTPSKNLFDKTDRAFSHGCIRVKDPLVLADKLLSANA 494

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            WS   +   +   KT  + L   + +  +Y +A + K+  I+F +D+Y  D V +  + 
Sbjct: 495 NWSSETLNNKLAEGKTENLFLDEPLDILIMYWTA-TIKNGKIKFYNDVYTRDPVLIEALN 553

Query: 422 LP 423
            P
Sbjct: 554 RP 555


>gi|254464823|ref|ZP_05078234.1| peptidoglycan-binding domain 1 [Rhodobacterales bacterium Y4I]
 gi|206685731|gb|EDZ46213.1| peptidoglycan-binding domain 1 [Rhodobacterales bacterium Y4I]
          Length = 542

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 170/333 (51%), Gaps = 10/333 (3%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + +L+ GGW P +  + L  G    +V  LR RL+  G L  S   S  +DA +  AV+ 
Sbjct: 196 EQVLAAGGWGPAVQAKTLEPGEQGPAVIALRNRLMAMGYLPRSAARS--YDAAMVQAVQS 253

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL+  G+  + TL  +N PV  R++ + + + R ++ L    G R++LVN    +
Sbjct: 254 FQSDHGLETDGVAGAGTLAEVNKPVSDRLKSVIIAMER-ERWLSPDRGERHILVNQTDFT 312

Query: 205 LEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            + V+NG V   +  ++G+   DR++P     +  ++ NP W +PRSII K+ +  LR +
Sbjct: 313 AKIVDNGDVTFETRSVIGKNTDDRRSPEFSDEMEHMVINPSWYVPRSIITKEYLPKLRNN 372

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P  +   +I + D +G+ V     D++     NF +  RQ P   NA+   K  F ++ N
Sbjct: 373 PNAV--GHIQITDRRGRVVNRSAADFSQYNARNFPYSMRQPPSSSNALGLVKFMFPNKYN 430

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP+  LF   VR  + GC+R+    +    LL       +     ++ + + T V
Sbjct: 431 IYLHDTPQKSLFAREVRAFSHGCIRLAQPFEFAYALLARQTEDPKAFFHRILNSGQETKV 490

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +L  +VPVH +Y +A        +FR D+YG D
Sbjct: 491 ELEQKVPVHIIYRTAVVSSKGRAEFRRDVYGRD 523


>gi|312961568|ref|ZP_07776069.1| hypothetical protein PFWH6_3485 [Pseudomonas fluorescens WH6]
 gi|311284247|gb|EFQ62827.1| hypothetical protein PFWH6_3485 [Pseudomonas fluorescens WH6]
          Length = 533

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/318 (33%), Positives = 164/318 (51%), Gaps = 13/318 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L  G     V  L  RL   G L   + G    +   + SAVK FQ+ H L   G++ + 
Sbjct: 216 LRPGMEDPRVPELARRLHSGGYLPAERQGNGKQYSPELVSAVKAFQLSHSLQSDGVIGAG 275

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T+  +N+   +R  QL++NL R +  L + +    VLVN+ AA L   ++G    ++ + 
Sbjct: 276 TVAELNISPAMRREQLRINLERFR-WLAKDLEPEGVLVNVAAAQLSVYQSGIPVWQTRLQ 334

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VGR +RQTP+L SRI R+  NP W IP +I+++D +  +R +P+YL+  N+ ++D +G  
Sbjct: 335 VGRAERQTPLLKSRITRLTLNPTWTIPPTIMREDKLPAIRLNPEYLRQQNLQVLDAEGHA 394

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           +  E +DW  P   N + RQ+ G  N +    + F +  + Y+HDTP   LF    R  +
Sbjct: 395 LAPELIDWARPG--NILLRQEAGPRNPLGKIVMRFPNPYSVYLHDTPSQPLFTKGPRAFS 452

Query: 341 SGCVRVRNIIDLDVWLLKD---TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
           SGCVRV   +     LL+D   +P   R   +E++ T  T   +LAT VPV   Y +   
Sbjct: 453 SGCVRVEQPL-----LLRDLLVSPA-ERARTDELLATGVTHEFRLATPVPVLLGYWTVEV 506

Query: 398 PKDSIIQFRDDIYGLDNV 415
            +   + +  DIY  D V
Sbjct: 507 DRQGGLVYAPDIYARDLV 524


>gi|212709809|ref|ZP_03317937.1| hypothetical protein PROVALCAL_00857 [Providencia alcalifaciens DSM
           30120]
 gi|212687620|gb|EEB47148.1| hypothetical protein PROVALCAL_00857 [Providencia alcalifaciens DSM
           30120]
          Length = 575

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 170/338 (50%), Gaps = 26/338 (7%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLD-------------PSKGLSVAFDAYVES-----A 141
           + L  G +S  V  LRE L+  G L+             P +   V  +A V S     A
Sbjct: 224 KTLKPGQASDDVITLREILVRDGLLEASAVSETVDASAPPEEINKVTANARVYSDDLVEA 283

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           VK FQ+++GL+  G++   T   +N+    +   + +N+ R++ ++ +  G   +LVNIP
Sbjct: 284 VKKFQLQYGLEADGVIGKGTRVWLNMQPKQKAGLMALNIQRLR-IVPESSGTG-ILVNIP 341

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           A +L+   N  + L S VIVGR DR+TPI+ S +N ++ NP W +P S+ +KD+    + 
Sbjct: 342 AYTLDFYLNNDIILDSKVIVGRADRKTPIMSSALNNVVINPPWSVPTSLARKDIAPKGKM 401

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEFY 316
           DP Y       +    G++ +  +   +DW +  P NF +  RQ PG  N++   K    
Sbjct: 402 DPSYFSRKGYTVYSGWGQDAYEIDPYTIDWENITPANFPYHIRQAPGSSNSLGRYKFNMP 461

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           S +  Y+HDTP   LFN   R  +SGCVRV    +L   LL D   W++  I+  +K   
Sbjct: 462 SSDAIYLHDTPNHSLFNKNARAISSGCVRVNKASELATILLGDA-GWAQTRIDGALKEGS 520

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           T  V +   +PV+  Y +AW  KD   Q+R DIY  D 
Sbjct: 521 TRYVNIPDRIPVYLYYQTAWVDKDQQPQYRADIYQYDG 558


>gi|311280161|ref|YP_003942392.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
 gi|308749356|gb|ADO49108.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
          Length = 602

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 173/350 (49%), Gaps = 33/350 (9%)

Query: 94  WPELPIR-PLHLGNSSVSVQRLRERLIISGDLD-------------------PSKGLSVA 133
           WP++     L+ G  S  V  LRE L  +G LD                   P K +  A
Sbjct: 238 WPQMASSGKLNPGQWSKDVPALREILQRTGMLDNTPNIALPGDSGAVSPSAAPVKKVKAA 297

Query: 134 ------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                 +D  +  AVK FQ   GL   G++  ST +A+NV    R   L +N+ R++ LL
Sbjct: 298 SSAPAVYDRQLVEAVKRFQASQGLGADGVIGQSTRDALNVSSAQRAGVLALNIQRLR-LL 356

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             K+    ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P
Sbjct: 357 PGKLSTG-IMVNIPAYSLVYYQNGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVP 415

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPG 303
            ++ +KD++  +  DP YL+ +   ++     +  +    VDW++  P N  F F+Q PG
Sbjct: 416 PTLARKDILPKVWNDPGYLERHGYTVLRGWNSKETINPYHVDWSTITPSNLPFRFQQAPG 475

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   K    S    Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W
Sbjct: 476 AKNSLGRYKFNMPSSEAIYLHDTPNHNLFQKDTRALSSGCVRVNKAPELASMLLQDA-GW 534

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 535 NDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVGPDGRTQYRTDIYNYD 584


>gi|319955785|ref|YP_004167048.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
           16511]
 gi|319418189|gb|ADV45299.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
           16511]
          Length = 575

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 179/351 (50%), Gaps = 10/351 (2%)

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL-SVA 133
           A+ +KA+  Y +I  RGGW  LP  + +  G S  ++  +R+ L I GDL  S  L S  
Sbjct: 199 AKLKKALERYLEIADRGGWKPLPAFKAIKPGQSHPAIPLIRQHLRIEGDLPASASLDSDI 258

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  ++ A++ +++RHGL  + ++D+ T   +N  V  +I  L++NL RIK +  Q+  +
Sbjct: 259 YDETLQKAMRRYKLRHGLPGTPVIDAQTRRWLNTSVQYKIAMLRLNLDRIKWIWRQEAPV 318

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R + +NIPA  L   E   +     V+ G+ D  TP+ H+ +  I+ NPYW IP SI++ 
Sbjct: 319 R-IELNIPAFRLYVYEGQHLVDTMRVVTGKPDHPTPVFHNTMKYIVVNPYWKIPESIVRS 377

Query: 254 DMMALLRQDPQYLKDNN--IHM-IDEKGKEVFVEEVDWNSPEPPN----FIFRQDPGKIN 306
           +M+  L +DP Y +     +H   DE    +    ++W+     N    + F Q PG  N
Sbjct: 378 EMLKHLVKDPYYYERRGKVLHAGWDEDSPRIDPGTINWSQYVGNNKTIPYRFMQVPGTRN 437

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+   K  F ++ + Y+HDTP   LF    R  + GC+R++   +L   L          
Sbjct: 438 ALGKIKFLFPNKYSVYIHDTPSKKLFFRSTRAFSHGCMRIQKPRELLKVLALYNSNIDVE 497

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
            I E + TR+   + L  E+PV  VY++A+      + FR DIY  D   +
Sbjct: 498 GIMEQLGTREKETISLLHEIPVDIVYLTAFVDDYGNLNFRKDIYHYDKYQM 548


>gi|291616920|ref|YP_003519662.1| YcbB [Pantoea ananatis LMG 20103]
 gi|291151950|gb|ADD76534.1| YcbB [Pantoea ananatis LMG 20103]
          Length = 620

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 149/281 (53%), Gaps = 8/281 (2%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +AVK FQ   GLD  G +   T E +NV    R   L +N+ R++ LL   M    ++VN
Sbjct: 327 AAVKRFQQWQGLDADGAIGLRTREWLNVSPQQRAALLALNIQRLR-LLPDDMH-NGIMVN 384

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP  SL    NG   L S VIVGR DR+TP++ S +N ++ NP W +P +++++D++  +
Sbjct: 385 IPNYSLNYYNNGTKVLSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTNLVRQDIIPKV 444

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIE 314
           +QDP YL  +   ++     +  V     +DW+     +F +  RQ PG+ N++   K  
Sbjct: 445 KQDPTYLYKHGYTLLSGWSADSEVIDPSMIDWSMVSASSFPYRIRQAPGQTNSLGRYKFN 504

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I + +K 
Sbjct: 505 MPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGILLQDV-GWNDARISDTLKQ 563

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             T  V +   +PV+  Y++AW   D   QFR DIY  DN 
Sbjct: 564 GDTRYVPIRHRIPVNLYYLTAWVADDGKTQFRTDIYNYDNT 604


>gi|90579750|ref|ZP_01235559.1| hypothetical amidase [Vibrio angustum S14]
 gi|90439324|gb|EAS64506.1| hypothetical amidase [Vibrio angustum S14]
          Length = 587

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 179/351 (50%), Gaps = 18/351 (5%)

Query: 78  TEKAIAFYQDI----LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK--GLS 131
           T  AIA YQD+    L+   + ++  +   L N       L + L   GD+D +    LS
Sbjct: 222 TMDAIAKYQDLPAHTLTSSNFKQVYRKGATLPNG----HELIKVLYTLGDMDQADYDRLS 277

Query: 132 VAFD----AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
           V  +      V  ++K FQ RHGL   G++ ++T++ + +P D   R+L +N +R+  L 
Sbjct: 278 VVHNITNTGAVFESLKAFQKRHGLASDGIIGAATVQQLVMPYDDIARRLALNTLRVATLN 337

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           +   G  ++ VNIP   LE  + G V   S VIVGR  R T +  S I  ++ NPYW +P
Sbjct: 338 KHAEGRPHIWVNIPNYKLEVFDKGNVVFESKVIVGRDSRPTNLFSSAITTMVVNPYWNVP 397

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNF--IFRQDPG 303
            +I Q D++  ++ +  YLK +N+ +++       +    +DW +  P  F   F+Q PG
Sbjct: 398 ITIKQHDVIPKVKHNIDYLKQHNMQILNSWRDRTVISPSSIDWATVNPKTFPHEFQQGPG 457

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   K    +    ++HDTP   LF+   R  +SGCVRV    DL  ++++     
Sbjct: 458 PRNSLGRVKFLMPNDYAIFLHDTPSRGLFSKTKRDLSSGCVRVERAYDLANYVIEYQNRG 517

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +    ++++  +K   V L+  + V FVY++AW   D  +Q R+DIYG D+
Sbjct: 518 NIPEFKQMLDAQKQKTVSLSKRIDVDFVYLTAWVDNDGKVQMREDIYGYDS 568


>gi|217973562|ref|YP_002358313.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
 gi|217498697|gb|ACK46890.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
          Length = 525

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 166/328 (50%), Gaps = 15/328 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G S   +  + +RL   GDL      +  +   +   VK FQ +HGL   G++   T
Sbjct: 198 LTVGMSHPLLDTIAKRLWRLGDLAIEPMTNFVYSEELVVGVKRFQQKHGLKQDGVIGKQT 257

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           L  +N         L  N +R +++ E+K+   Y+L+N+PA  +  V+NG   L S VIV
Sbjct: 258 LYWLNQSPKASAVLLAKNTIR-QRVFERKLEPSYLLINVPAFEMFLVDNGTTVLNSKVIV 316

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G+  RQTP+L S+I+ ++ NP W +P SI+++D++  +R++  YL +    + D  G+ V
Sbjct: 317 GKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDILPQIRRNGHYLNERQFDVYDYNGQLV 376

Query: 282 FVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                +W      +F ++  Q PG  NA+   K  F +  + Y+H T EP LFN   R  
Sbjct: 377 QHMPEEWQDLASTSFPYQLVQRPGAKNALGKYKFHFDNSFSVYLHGTSEPSLFNKDDRAL 436

Query: 340 TSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTP--VKLATEVPVHFVYI 393
           +SGC+R+  + +L  W    L+KD   W +      +    T P    L+ ++PVH VY 
Sbjct: 437 SSGCIRIEKVTELAQWFKEHLVKDKRLWDK------LAPDVTEPQWFSLSQKLPVHLVYW 490

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           +AW       Q+R DIY L+      +P
Sbjct: 491 TAWLDDSGQEQYRSDIYHLEAELTNTVP 518


>gi|327393347|dbj|BAK10769.1| cell wall degradation amidase protein YcbB [Pantoea ananatis
           AJ13355]
          Length = 610

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 149/281 (53%), Gaps = 8/281 (2%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +AVK FQ   GLD  G +   T E +NV    R   L +N+ R++ LL   M    ++VN
Sbjct: 317 AAVKRFQQWQGLDADGAIGLRTREWLNVSPQQRAALLALNIQRLR-LLPDDMH-NGIMVN 374

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP  SL    NG   L S VIVGR DR+TP++ S +N ++ NP W +P +++++D++  +
Sbjct: 375 IPNYSLNYYNNGTKVLSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTNLVRQDIIPKV 434

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIE 314
           +QDP YL  +   ++     +  V     +DW+     +F +  RQ PG+ N++   K  
Sbjct: 435 KQDPTYLYKHGYTLLSGWSADSEVIDPSMIDWSMVSASSFPYRIRQAPGQTNSLGRYKFN 494

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I + +K 
Sbjct: 495 MPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGILLQDV-GWNDARISDTLKQ 553

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             T  V +   +PV+  Y++AW   D   QFR DIY  DN 
Sbjct: 554 GDTRYVPIRHRIPVNLYYLTAWVADDGKTQFRTDIYNYDNT 594


>gi|170726506|ref|YP_001760532.1| peptidoglycan-binding domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169811853|gb|ACA86437.1| Peptidoglycan-binding domain 1 protein [Shewanella woodyi ATCC
           51908]
          Length = 461

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 160/318 (50%), Gaps = 17/318 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+ + +V+ +  RL   GDL   DP    SV     V   +  FQ RHGL   G++ 
Sbjct: 139 LKEGDINPAVKVISRRLNWLGDLNFLDPDN--SVMTSELVRGVLN-FQRRHGLKQDGVIG 195

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             TL  +N+    R   L  N +     L   +G R++LVNIPA  +  V+ G+V L S 
Sbjct: 196 PETLRWINLTPKKRAALLAENFISKSSYLS-TIGPRFLLVNIPAFEMVLVDKGQVQLESR 254

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           VIVG+  RQTP L S I+ ++ NP W +PR+++++D++  +R+D  Y+ ++N  + +  G
Sbjct: 255 VIVGKPYRQTPRLSSYISNMVLNPSWRVPRTLLRRDLLPKVRKDGAYISEHNFDVFNSAG 314

Query: 279 KEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            E+     +W +     F +R  Q PGK N +   K  F +  N Y+HDT +  LF    
Sbjct: 315 DEIVKSPEEWQTLAGGRFPYRLVQKPGKDNTLGRYKFYFKNEYNVYLHDTYDKALFEESN 374

Query: 337 RFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           R  +SGC+RV  +  L  W    L+ D  TW     E      KT        + VH VY
Sbjct: 375 RALSSGCIRVEKVESLANWLASNLVSDKQTWVDLQTER----DKTQWFAFDNFLAVHLVY 430

Query: 393 ISAWSPKDSIIQFRDDIY 410
            +AW  +  + QFR+DIY
Sbjct: 431 WTAWVDESGLAQFRNDIY 448


>gi|281178056|dbj|BAI54386.1| putative amidase [Escherichia coli SE15]
          Length = 615

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 164/315 (52%), Gaps = 12/315 (3%)

Query: 107 SSVSVQRLRERLI---ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           S+V+V+    +L+    +    P+  +  A+D  +  AVK FQ   GL   G +  +T +
Sbjct: 287 SAVTVETAETKLMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRD 346

Query: 164 AMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            +NV    R   L +N+ R++ L  E   G   ++VNIPA SL   +NG   L S VIVG
Sbjct: 347 WLNVTPAQRAGVLALNIQRLRLLPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVG 403

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   ++        
Sbjct: 404 RPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREA 463

Query: 283 VE--EVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           ++  +VDW++    N  F F+Q PG  N++   K    S    Y+HDTP   LF    R 
Sbjct: 464 IDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRA 523

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV+  Y++A+  
Sbjct: 524 LSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVG 582

Query: 399 KDSIIQFRDDIYGLD 413
            D   Q+R DIY  D
Sbjct: 583 ADGRTQYRTDIYNYD 597


>gi|91210027|ref|YP_540013.1| hypothetical protein UTI89_C0997 [Escherichia coli UTI89]
 gi|117623143|ref|YP_852056.1| hypothetical protein APECO1_37 [Escherichia coli APEC O1]
 gi|218557830|ref|YP_002390743.1| hypothetical protein ECS88_0953 [Escherichia coli S88]
 gi|237707087|ref|ZP_04537568.1| YcbB [Escherichia sp. 3_2_53FAA]
 gi|91071601|gb|ABE06482.1| hypothetical protein YcbB [Escherichia coli UTI89]
 gi|115512267|gb|ABJ00342.1| YcbB [Escherichia coli APEC O1]
 gi|218364599|emb|CAR02285.1| putative exported enzyme [Escherichia coli S88]
 gi|226898297|gb|EEH84556.1| YcbB [Escherichia sp. 3_2_53FAA]
 gi|294493685|gb|ADE92441.1| putative peptidoglycan binding domain protein [Escherichia coli
           IHE3034]
 gi|307627648|gb|ADN71952.1| hypothetical protein UM146_12925 [Escherichia coli UM146]
 gi|315287548|gb|EFU46954.1| conserved hypothetical protein [Escherichia coli MS 110-3]
 gi|323953367|gb|EGB49233.1| ykud domain-containing protein [Escherichia coli H252]
 gi|323958230|gb|EGB53939.1| ykud domain-containing protein [Escherichia coli H263]
          Length = 615

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 164/315 (52%), Gaps = 12/315 (3%)

Query: 107 SSVSVQRLRERLI---ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           S+V+V+    +L+    +    P+  +  A+D  +  AVK FQ   GL   G +  +T +
Sbjct: 287 SAVTVETAETKLMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRD 346

Query: 164 AMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            +NV    R   L +N+ R++ L  E   G   ++VNIPA SL   +NG   L S VIVG
Sbjct: 347 WLNVTPAQRAGVLALNIQRLRLLPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVG 403

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   ++        
Sbjct: 404 RPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREA 463

Query: 283 VE--EVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           ++  +VDW++    N  F F+Q PG  N++   K    S    Y+HDTP   LF    R 
Sbjct: 464 IDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRA 523

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV+  Y++A+  
Sbjct: 524 LSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVG 582

Query: 399 KDSIIQFRDDIYGLD 413
            D   Q+R DIY  D
Sbjct: 583 ADGRTQYRTDIYNYD 597


>gi|283784752|ref|YP_003364617.1| hypothetical protein ROD_09941 [Citrobacter rodentium ICC168]
 gi|282948206|emb|CBG87773.1| putative exported protein [Citrobacter rodentium ICC168]
          Length = 624

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 154/287 (53%), Gaps = 9/287 (3%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQK 190
            A+D  + +AVK FQ   GL   G +  +T   MNV    R   L +N+ R++ L  E  
Sbjct: 324 AAYDRELVAAVKQFQAWQGLGADGAIGPATRYWMNVTPAQRAGGLALNIQRLRLLPAELS 383

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
            G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 384 TG---IMVNIPAYSLVYYQNGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 440

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKIN 306
            +KD++  L  DP YL+ +   ++     +  ++  +VDW++  P N  F F+Q PG  N
Sbjct: 441 ARKDILPKLWNDPGYLERHGYTVMRGWNSKDAIDPWQVDWSTITPSNLPFRFQQAPGAHN 500

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF+   R  +SGCVRV    +L   LL+D   W+  
Sbjct: 501 SLGRYKFNMPSSDAIYLHDTPNHTLFSKDARALSSGCVRVNKASELANMLLQDA-GWNDT 559

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 560 RISDALKQGNTRYVTIRQTIPVNLYYLTAFVGADGRTQYRTDIYNYD 606


>gi|83859233|ref|ZP_00952754.1| hypothetical protein OA2633_12550 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852680|gb|EAP90533.1| hypothetical protein OA2633_12550 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 506

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 153/318 (48%), Gaps = 7/318 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+    V  LR RL   G L         FD  +ESAV  FQ RH L   G  
Sbjct: 159 PGEALSRGDQGPRVDALRARLAQLGLLAGPVAAGAPFDGRLESAVMRFQTRHNLAADGEA 218

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             STL  +N     RI Q++ NL R +  L  ++G R++ VNI    LEA ENG V    
Sbjct: 219 GPSTLSELNAGDARRINQIRANLERWR-WLPAELGERHIRVNIADYRLEAWENGVVARTH 277

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-E 276
             ++G+   +TP+    ++ I  NPYW+ P  + Q+  +   R +P Y       ++D +
Sbjct: 278 ETMIGQRYSRTPVFSEDMSIIEINPYWLTPSGLGQR-WLRTFRTNPAYALSQGYRLVDLD 336

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            G  V   + DW S     +   Q PG  NAM   K  F + +N Y+HDTP   LF N  
Sbjct: 337 TGARVDPYQADWASR---RYRVIQAPGPNNAMGRVKFLFPNVHNVYIHDTPHRELFANAQ 393

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R ++SGCVRV +  +L +W+L     WS   + E   +  T  ++L   VPVH +Y +A 
Sbjct: 394 RDDSSGCVRVEHPEELAIWILS-AEGWSAQAVREAFDSGDTRRIRLRHVVPVHILYFTAV 452

Query: 397 SPKDSIIQFRDDIYGLDN 414
           S +   ++F  D+Y  D 
Sbjct: 453 SDEMGRVRFIHDVYDRDE 470


>gi|188534256|ref|YP_001908053.1| hypothetical protein ETA_21290 [Erwinia tasmaniensis Et1/99]
 gi|188029298|emb|CAO97175.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
          Length = 612

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 158/307 (51%), Gaps = 17/307 (5%)

Query: 121 SGDLDPSKGLSV------AFDAYVES---AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           SG+   + G++V      A + Y      A+K FQ   GL+  G +   T E +NV    
Sbjct: 291 SGNATAANGVNVQAALGNAANTYTPQLVEALKRFQRWQGLEADGAIGQRTREWLNVSPQQ 350

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R   L +N+ R++ LL   M    ++VNIP  SL    NG+  L S VIVGR DR+TP++
Sbjct: 351 RATLLALNIQRLR-LLPDDMH-NGIMVNIPNYSLAYYVNGREILASRVIVGRPDRKTPLM 408

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE---VDW 288
            S +N ++ NP W +P ++I+KD++  ++QDP YL  +   ++     E  V +   +DW
Sbjct: 409 RSALNNVVLNPPWNVPTTLIRKDIVPKVKQDPAYLYKHGYTLLSGWSSEAQVVDPSMIDW 468

Query: 289 NSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           +     +F +  RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV
Sbjct: 469 SMVSAASFPYRIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRV 528

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
               DL   LL+D   W+   I   +K   T  V +   +PV+  Y++AW   D   QFR
Sbjct: 529 NRASDLANLLLRDV-GWNDTRISSTLKEGDTRFVSIRHRIPVNLYYLTAWVADDGQPQFR 587

Query: 407 DDIYGLD 413
            DIY  D
Sbjct: 588 TDIYNYD 594


>gi|296103072|ref|YP_003613218.1| hypothetical protein ECL_02728 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057531|gb|ADF62269.1| hypothetical protein ECL_02728 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 607

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/286 (35%), Positives = 156/286 (54%), Gaps = 7/286 (2%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
            A+D  + +AVK FQ   GL   G++  ST + +NV    R   L +N+ R++ LL   +
Sbjct: 307 AAYDRELVAAVKQFQAAQGLGADGVIGPSTRDWLNVSPAQRAGVLALNIQRLR-LLPGTL 365

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 366 STG-IMVNIPAYSLVYYQNGSEVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 424

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +N  +I     +  ++   VDW++  P N  F F+Q PG  N+
Sbjct: 425 RKDILPKVWNDPGYLERHNYTVIRGWNSKETIDPWMVDWSTITPSNLPFRFQQAPGAHNS 484

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 485 LGRYKFNMPSSDAIYLHDTPNHNLFQKDARALSSGCVRVNKASELANMLLQDA-GWNDTR 543

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I + +K   T  V +   +PV+  Y++A+  +D   Q+R DIY  D
Sbjct: 544 ISDALKQGDTRYVNIRHNIPVNLYYLTAFVGEDGRTQYRTDIYNYD 589


>gi|218700556|ref|YP_002408185.1| hypothetical protein ECIAI39_2222 [Escherichia coli IAI39]
 gi|218370542|emb|CAR18349.1| putative exported enzyme [Escherichia coli IAI39]
          Length = 615

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNNREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTCYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|24112334|ref|NP_706844.1| hypothetical protein SF0922 [Shigella flexneri 2a str. 301]
 gi|24051196|gb|AAN42551.1| putative amidase [Shigella flexneri 2a str. 301]
 gi|332759013|gb|EGJ89323.1| putative peptidoglycan binding domain protein [Shigella flexneri
           4343-70]
 gi|332760103|gb|EGJ90401.1| putative peptidoglycan binding domain protein [Shigella flexneri
           2747-71]
 gi|332767712|gb|EGJ97903.1| L,D-transpeptidase YcbB [Shigella flexneri 2930-71]
 gi|333006182|gb|EGK25691.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-218]
          Length = 615

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  EVDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWEVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|330809814|ref|YP_004354276.1| hypothetical protein PSEBR_a2969 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377922|gb|AEA69272.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 520

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 162/322 (50%), Gaps = 8/322 (2%)

Query: 94  WPELPIRPL-HLGNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGL 151
           W  +P  PL         V  L +RL   G L  P       +   +  A+K FQ++H L
Sbjct: 194 WQPVPGGPLLQPDKQDARVPALAQRLFNEGYLSTPPLVTDEHYSPTLVEAMKSFQLQHSL 253

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
              G+V   T+  +N+   +R  QL++NL R++  L Q +    VLVN+ AA L     G
Sbjct: 254 QADGVVGPWTVTELNISPAMRREQLRINLERMR-WLAQDVENDSVLVNVAAAQLTVYRGG 312

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +   ++   VGR  RQTP+L S + R+  NP W IP +I+++D +  +R+DP++L  +N+
Sbjct: 313 EPIWQTRTQVGRAQRQTPLLKSHVTRLTLNPTWTIPPTIMREDKLPEIRRDPEFLARHNL 372

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            ++D +G  +  E++DW  P   N + RQDPG  N +    I F +  + Y+HDTP   L
Sbjct: 373 RILDSEGLPLMAEDIDWEHPG--NLMLRQDPGPKNPLGKMAIRFPNPFSVYLHDTPSQAL 430

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F+   R  +SGCVR+  ++ L   L+       R   + ++ +  T   +LA  VP+   
Sbjct: 431 FSKGPRAFSSGCVRIEQVMHLRDLLVSPA---ERARTDTLLASETTHEFRLARPVPILLG 487

Query: 392 YISAWSPKDSIIQFRDDIYGLD 413
           Y +A +       +  DIY  D
Sbjct: 488 YWTAQADSQGQPLYIPDIYARD 509


>gi|30062460|ref|NP_836631.1| hypothetical protein S0986 [Shigella flexneri 2a str. 2457T]
 gi|30040706|gb|AAP16437.1| putative amidase [Shigella flexneri 2a str. 2457T]
 gi|281600285|gb|ADA73269.1| putative amidase [Shigella flexneri 2002017]
 gi|332762697|gb|EGJ92960.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-671]
 gi|333020100|gb|EGK39371.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-304]
          Length = 615

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  EVDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWEVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|313650833|gb|EFS15234.1| putative peptidoglycan binding domain protein [Shigella flexneri 2a
           str. 2457T]
          Length = 611

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 305 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 364

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 365 LPTELSTG---IMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 421

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  EVDW++    N  F F+Q
Sbjct: 422 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWEVDWSTITASNLPFRFQQ 481

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 482 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 541

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 542 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 593


>gi|312971055|ref|ZP_07785234.1| cell wall degradation protein [Escherichia coli 1827-70]
 gi|310336816|gb|EFQ01983.1| cell wall degradation protein [Escherichia coli 1827-70]
 gi|323165398|gb|EFZ51185.1| cell wall degradation protein [Shigella sonnei 53G]
          Length = 317

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 11  PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 70

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 71  LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 127

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 128 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 187

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 188 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 247

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 248 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 299


>gi|238789300|ref|ZP_04633087.1| Peptidoglycan-binding domain 1 protein [Yersinia frederiksenii ATCC
           33641]
 gi|238722632|gb|EEQ14285.1| Peptidoglycan-binding domain 1 protein [Yersinia frederiksenii ATCC
           33641]
          Length = 625

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 148/278 (53%), Gaps = 8/278 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ  HGL   G++   T E +NV    R   L +N+ R++ +L  ++    ++VNI
Sbjct: 333 AVKRFQQWHGLSDDGVIGIRTREWLNVTPQTRATLLALNIQRLR-ILPGRVD-NGIMVNI 390

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P S+I++D++   R
Sbjct: 391 PNYSLNYYKNGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLIRQDIVPKAR 450

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
            D  Y + +   ++     +  V +   ++WN   P NF +  RQ+PG  N++   K   
Sbjct: 451 YDSSYFQRHGYTVLSGWSNDAEVVDPSMINWNMISPNNFPYRLRQEPGASNSLGRFKFNM 510

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +   +K  
Sbjct: 511 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDARVSSTLKQG 569

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            TT V +   +PV   Y++AW  +D   QFR DIY  D
Sbjct: 570 NTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYD 607


>gi|73537776|ref|YP_298143.1| hypothetical protein Reut_B3942 [Ralstonia eutropha JMP134]
 gi|72121113|gb|AAZ63299.1| conserved hypothetical protein [Ralstonia eutropha JMP134]
          Length = 557

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 166/346 (47%), Gaps = 14/346 (4%)

Query: 81  AIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
           A+A Y+ + ++ GW    P LP   L  G +   +  +  RL   GD+         +  
Sbjct: 172 ALAHYRTLAAQPGWDRTLPALPGGKLTSGQAYSGLAEMARRLQALGDMPADAPAPKRYSG 231

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK--KLLEQKMGLR 194
            V   VK FQ RHGL+  G++ + TL  +N     R+RQ+++ + R++   L +     R
Sbjct: 232 AVVDGVKAFQARHGLEADGVIGAGTLAQLNTTPAARVRQIELTMERLRWTPLTDSP---R 288

Query: 195 YVLVNIPAASLEAVE--NGK--VGLRSTVIVGR-VDRQTPILHSRINRIMFNPYWVIPRS 249
            ++VNIP   L A +   GK  + L   VIVG+ +D +TP+    +  I F+PYW +P S
Sbjct: 289 MIVVNIPEFMLRAYDYNGGKLDIKLEMKVIVGKALDTRTPLFKEDMRYIEFSPYWNVPPS 348

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I + + +  LR+DP Y        +        + + + ++        RQ PG +NA+ 
Sbjct: 349 IARSETIPRLRRDPAYFTQQGFEFVSNGKAVTTLSDANLDAVLNGRMRIRQRPGPMNALG 408

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +  N Y+H TP P LF    R  + GC+RV   + L  ++L+D P W+   I 
Sbjct: 409 DIKFVFPNNQNIYLHHTPTPQLFKRDRRDFSHGCIRVEEPVALAKFVLQDMPGWTEERIR 468

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           + +   ++  V L   +PV   Y +A +  D  + F  DIYG D +
Sbjct: 469 QAMTKGQSNTVALQQPLPVVLAYGTAIARADGRVYFLPDIYGQDKL 514


>gi|209694858|ref|YP_002262786.1| hypothetical protein VSAL_I1327 [Aliivibrio salmonicida LFI1238]
 gi|208008809|emb|CAQ79012.1| putative exported protein [Aliivibrio salmonicida LFI1238]
          Length = 512

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 177/333 (53%), Gaps = 21/333 (6%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAY---VESAVKLFQMR 148
           P+L    L   N  +  + L  RL ISG+L+  +    LS   D Y   + + VK FQ R
Sbjct: 180 PKLYSSRLLKPNQDIPYKSLVYRLQISGELNEEQIHYFLSQEGDKYNNELVNVVKSFQKR 239

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G+V   TL  +N+  + R+R + +N+ R++  L +    R+VLVNIP+  +   
Sbjct: 240 HGLVVDGIVGKRTLYWLNMSANERVRIMALNIQRLR--LWENKNARFVLVNIPSYEMGYW 297

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
             G++  +S VIVG+ +R+TP+  +R++ I+FNP W +P  I+++D++    ++  YL  
Sbjct: 298 LKGELVFKSKVIVGKPERKTPLFTTRLDSIVFNPNWKVPTKIMKEDILPKALENQDYLLT 357

Query: 269 NNIHMIDEKGKEVFV--EEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMH 324
           +N  ++     +  +  E ++W +    NF +  RQ  G  NA+   K    +RN  Y+H
Sbjct: 358 HNYEVLPSWLSDEVIPFESIEWETMTVDNFPYKLRQKSGNANALGRYKFNTPNRNAIYLH 417

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT----PTWSRYHIEEVVKTRKTTPV 380
           DTP   LFN   R  +SGC+RV    +    L+K++      ++ YH     +  KT  V
Sbjct: 418 DTPSRSLFNKQHRAYSSGCIRVEKASEFAQLLMKESHFTAKDYAGYH-----RLPKTNTV 472

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            L+ ++ V+ +Y +AW  +   IQFR+D+Y  D
Sbjct: 473 GLSQKIAVYTIYQTAWVDEADTIQFRNDVYRYD 505


>gi|238763355|ref|ZP_04624319.1| Peptidoglycan-binding domain 1 protein [Yersinia kristensenii ATCC
           33638]
 gi|238698454|gb|EEP91207.1| Peptidoglycan-binding domain 1 protein [Yersinia kristensenii ATCC
           33638]
          Length = 624

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 148/278 (53%), Gaps = 8/278 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ  HGL   G++ + T E +NV    R   L +N+ R++ +L  ++    ++VNI
Sbjct: 332 AVKRFQQWHGLSEDGVIGARTREWLNVSPQTRATLLALNIQRLR-ILPGRVD-NGIMVNI 389

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P S++++D++   R
Sbjct: 390 PNYSLNYYKNGSEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKAR 449

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
            D  Y + +   ++     +  V +   +DW+   P NF +  RQ PG  N++   K   
Sbjct: 450 YDSSYFQRHGYTVLSGWSNDAQVVDPSMIDWSMISPNNFPYRLRQAPGASNSLGRFKFNM 509

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +   +K  
Sbjct: 510 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDARVSSTLKQG 568

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            TT V +   +PV   Y++AW  +D   QFR DIY  D
Sbjct: 569 DTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYD 606


>gi|310767192|gb|ADP12142.1| hypothetical protein EJP617_24610 [Erwinia sp. Ejp617]
          Length = 615

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/280 (34%), Positives = 151/280 (53%), Gaps = 8/280 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           A+K FQ   GL+  G + + T E +NV    R   L +N+ R++ LL   M    ++VNI
Sbjct: 323 ALKRFQRWQGLEADGAIGTRTREWLNVSPQQRATLLALNIQRLR-LLPDDMQ-NGIMVNI 380

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W +P ++++KD++  ++
Sbjct: 381 PNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVRKDIVPKVK 440

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
           +DP YL  +   ++     E  V +   ++W++    +F +  RQ PG  N++   K   
Sbjct: 441 RDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSTVSAASFPYRIRQAPGATNSLGRYKFNM 500

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   I   +K  
Sbjct: 501 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLLRDV-GWNDARISGTLKEG 559

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            T  V +   +PV+  Y++AW  +D   Q+R DIY  DN 
Sbjct: 560 NTRFVPIRQRIPVNLYYLTAWVAEDGQPQYRTDIYNYDNT 599


>gi|157146384|ref|YP_001453703.1| hypothetical protein CKO_02143 [Citrobacter koseri ATCC BAA-895]
 gi|157083589|gb|ABV13267.1| hypothetical protein CKO_02143 [Citrobacter koseri ATCC BAA-895]
          Length = 620

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 155/292 (53%), Gaps = 7/292 (2%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G V  +T E +NV    R   L +N+ R++ 
Sbjct: 314 PAPAVRAAYDRELVDAVKRFQTWQGLGADGAVGPATREWLNVTPAQRAGVLALNIQRLR- 372

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           LL  ++    ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W 
Sbjct: 373 LLPGELSTG-IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWN 431

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIH-MIDEKGKEVFVE-EVDWNSPEPPN--FIFRQD 301
           +P ++ +KD++  +  DP YL+ +    M     KE     +VDW++  P N  F F+Q 
Sbjct: 432 VPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKETINPWQVDWSTITPSNLPFRFQQA 491

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D  
Sbjct: 492 PGAHNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDTRALSSGCVRVNKASELANMLLQDA- 550

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 551 GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRTQYRTDIYNYD 602


>gi|258546017|ref|ZP_05706251.1| peptidoglycan binding protein [Cardiobacterium hominis ATCC 15826]
 gi|258518746|gb|EEV87605.1| peptidoglycan binding protein [Cardiobacterium hominis ATCC 15826]
          Length = 599

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 160/324 (49%), Gaps = 13/324 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           LP   L  G +  +V  LRE+L        + G S  FD  +  AV  +Q  HGL   G+
Sbjct: 274 LPKVTLKQGMNHEAVAILREKLGAPA----TDGDSTYFDGALAEAVTAYQQSHGLKADGI 329

Query: 157 VDSSTLEAMN-----VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           V   T   +N        +  + +L +N+ R++  + Q MG  YVLVNIP+  ++     
Sbjct: 330 VSGKTRNLLNGNKASSGGNASVDRLMINMERLR-WMPQDMGESYVLVNIPSYYVKMYRGS 388

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +    S  +VG+ DRQTP    ++  I+ +P W +P +I++KD +  LR +P    D + 
Sbjct: 389 EEIYASKAVVGQRDRQTPAFTDKLRHIVMSPTWTVPPTIMKKDKINKLRSNPGAF-DGSF 447

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
             +   G+ V    VDW++P    +  RQ PG  NA+   K  F +++  Y+HDTP   L
Sbjct: 448 EAV-VGGRVVRPSAVDWSAPGATGYRLRQKPGARNALGRVKFLFPNKHAIYLHDTPSKSL 506

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F    R  +SGCVR++   +    LL++T  WS   I++ +   K   V    + P++ V
Sbjct: 507 FGRNDRALSSGCVRLQKPEEFANILLQNT-NWSAERIKKAMNQEKEQWVNTPEQTPIYLV 565

Query: 392 YISAWSPKDSIIQFRDDIYGLDNV 415
           Y + WS  D  IQ  +DIYG D  
Sbjct: 566 YWTTWSDPDGKIQTANDIYGKDGA 589


>gi|187731093|ref|YP_001880874.1| hypothetical protein SbBS512_E2393 [Shigella boydii CDC 3083-94]
 gi|187428085|gb|ACD07359.1| putative peptidoglycan binding domain [Shigella boydii CDC 3083-94]
          Length = 615

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|300937730|ref|ZP_07152531.1| conserved hypothetical protein [Escherichia coli MS 21-1]
 gi|300457237|gb|EFK20730.1| conserved hypothetical protein [Escherichia coli MS 21-1]
          Length = 615

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNNREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|74311483|ref|YP_309902.1| hypothetical protein SSON_0928 [Shigella sonnei Ss046]
 gi|73854960|gb|AAZ87667.1| putative amidase [Shigella sonnei Ss046]
          Length = 615

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|309795089|ref|ZP_07689509.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|308121393|gb|EFO58655.1| conserved hypothetical protein [Escherichia coli MS 145-7]
          Length = 615

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|291281926|ref|YP_003498744.1| putative peptidoglycan binding domain protein [Escherichia coli
           O55:H7 str. CB9615]
 gi|209774748|gb|ACI85686.1| putative amidase [Escherichia coli]
 gi|209774754|gb|ACI85689.1| putative amidase [Escherichia coli]
 gi|290761799|gb|ADD55760.1| Putative peptidoglycan binding domain protein [Escherichia coli
           O55:H7 str. CB9615]
 gi|320642918|gb|EFX12119.1| murein L,D-transpeptidase [Escherichia coli O157:H- str. 493-89]
 gi|320648375|gb|EFX17030.1| murein L,D-transpeptidase [Escherichia coli O157:H- str. H 2687]
 gi|320653691|gb|EFX21765.1| murein L,D-transpeptidase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320659836|gb|EFX27392.1| murein L,D-transpeptidase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664305|gb|EFX31456.1| murein L,D-transpeptidase [Escherichia coli O157:H7 str. LSU-61]
          Length = 615

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|82544667|ref|YP_408614.1| hypothetical protein SBO_2216 [Shigella boydii Sb227]
 gi|191166981|ref|ZP_03028804.1| putative peptidoglycan binding domain [Escherichia coli B7A]
 gi|193064628|ref|ZP_03045707.1| putative peptidoglycan binding domain [Escherichia coli E22]
 gi|193070734|ref|ZP_03051669.1| putative peptidoglycan binding domain [Escherichia coli E110019]
 gi|194428336|ref|ZP_03060877.1| putative peptidoglycan binding domain protein [Escherichia coli
           B171]
 gi|209918175|ref|YP_002292259.1| hypothetical protein ECSE_0984 [Escherichia coli SE11]
 gi|218553512|ref|YP_002386425.1| hypothetical protein ECIAI1_0966 [Escherichia coli IAI1]
 gi|218694399|ref|YP_002402066.1| hypothetical protein EC55989_0971 [Escherichia coli 55989]
 gi|260843174|ref|YP_003220952.1| putative carboxypeptidase [Escherichia coli O103:H2 str. 12009]
 gi|260854216|ref|YP_003228107.1| putative carboxypeptidase [Escherichia coli O26:H11 str. 11368]
 gi|293433222|ref|ZP_06661650.1| hypothetical protein ECCG_01347 [Escherichia coli B088]
 gi|300816970|ref|ZP_07097189.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300823665|ref|ZP_07103792.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300902916|ref|ZP_07120861.1| hypothetical protein HMPREF9536_01061 [Escherichia coli MS 84-1]
 gi|300921037|ref|ZP_07137424.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|301302465|ref|ZP_07208596.1| hypothetical protein HMPREF9347_01042 [Escherichia coli MS 124-1]
 gi|307311688|ref|ZP_07591328.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|331667303|ref|ZP_08368168.1| putative amidase [Escherichia coli TA271]
 gi|331676713|ref|ZP_08377409.1| putative amidase [Escherichia coli H591]
 gi|81246078|gb|ABB66786.1| putative amidase [Shigella boydii Sb227]
 gi|190902975|gb|EDV62701.1| putative peptidoglycan binding domain [Escherichia coli B7A]
 gi|192927685|gb|EDV82300.1| putative peptidoglycan binding domain [Escherichia coli E22]
 gi|192955927|gb|EDV86395.1| putative peptidoglycan binding domain [Escherichia coli E110019]
 gi|194413551|gb|EDX29832.1| putative peptidoglycan binding domain protein [Escherichia coli
           B171]
 gi|209911434|dbj|BAG76508.1| putative amidase [Escherichia coli SE11]
 gi|218351131|emb|CAU96835.1| putative exported enzyme [Escherichia coli 55989]
 gi|218360280|emb|CAQ97830.1| putative exported enzyme [Escherichia coli IAI1]
 gi|257752865|dbj|BAI24367.1| predicted carboxypeptidase [Escherichia coli O26:H11 str. 11368]
 gi|257758321|dbj|BAI29818.1| predicted carboxypeptidase [Escherichia coli O103:H2 str. 12009]
 gi|291324041|gb|EFE63463.1| hypothetical protein ECCG_01347 [Escherichia coli B088]
 gi|300405058|gb|EFJ88596.1| hypothetical protein HMPREF9536_01061 [Escherichia coli MS 84-1]
 gi|300412028|gb|EFJ95338.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300523865|gb|EFK44934.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300530322|gb|EFK51384.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300842304|gb|EFK70064.1| hypothetical protein HMPREF9347_01042 [Escherichia coli MS 124-1]
 gi|306908243|gb|EFN38742.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|315060210|gb|ADT74537.1| murein L,D-transpeptidase [Escherichia coli W]
 gi|315257966|gb|EFU37934.1| putative amidase [Escherichia coli MS 85-1]
 gi|320183824|gb|EFW58657.1| L,D-transpeptidase YcbB [Shigella flexneri CDC 796-83]
 gi|323157188|gb|EFZ43311.1| putative peptidoglycan binding domain protein [Escherichia coli
           EPECa14]
 gi|323159552|gb|EFZ45532.1| putative peptidoglycan binding domain protein [Escherichia coli
           E128010]
 gi|323379230|gb|ADX51498.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11]
 gi|323947286|gb|EGB43294.1| ykud domain-containing protein [Escherichia coli H120]
 gi|324117210|gb|EGC11118.1| ykud domain-containing protein [Escherichia coli E1167]
 gi|331065659|gb|EGI37552.1| putative amidase [Escherichia coli TA271]
 gi|331075402|gb|EGI46700.1| putative amidase [Escherichia coli H591]
 gi|332093526|gb|EGI98584.1| putative peptidoglycan binding domain protein [Shigella boydii
           3594-74]
          Length = 615

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|157160446|ref|YP_001457764.1| hypothetical protein EcHS_A1032 [Escherichia coli HS]
 gi|170020673|ref|YP_001725627.1| hypothetical protein EcolC_2671 [Escherichia coli ATCC 8739]
 gi|188494298|ref|ZP_03001568.1| putative peptidoglycan binding domain [Escherichia coli 53638]
 gi|194438718|ref|ZP_03070805.1| putative peptidoglycan binding domain protein [Escherichia coli
           101-1]
 gi|253774046|ref|YP_003036877.1| hypothetical protein ECBD_2670 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161039|ref|YP_003044147.1| hypothetical protein ECB_00929 [Escherichia coli B str. REL606]
 gi|256023374|ref|ZP_05437239.1| hypothetical protein E4_08369 [Escherichia sp. 4_1_40B]
 gi|297521034|ref|ZP_06939420.1| hypothetical protein EcolOP_25597 [Escherichia coli OP50]
 gi|300929620|ref|ZP_07145082.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300949712|ref|ZP_07163691.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300955427|ref|ZP_07167801.1| hypothetical protein HMPREF9547_01312 [Escherichia coli MS 175-1]
 gi|301022419|ref|ZP_07186302.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|301643445|ref|ZP_07243493.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|307137554|ref|ZP_07496910.1| hypothetical protein EcolH7_05406 [Escherichia coli H736]
 gi|331641451|ref|ZP_08342586.1| putative amidase [Escherichia coli H736]
 gi|157066126|gb|ABV05381.1| putative peptidoglycan binding domain [Escherichia coli HS]
 gi|169755601|gb|ACA78300.1| Peptidoglycan-binding domain 1 protein [Escherichia coli ATCC 8739]
 gi|188489497|gb|EDU64600.1| putative peptidoglycan binding domain [Escherichia coli 53638]
 gi|194422350|gb|EDX38350.1| putative peptidoglycan binding domain protein [Escherichia coli
           101-1]
 gi|242376740|emb|CAQ31453.1| L,D-transpeptidase YcbB [Escherichia coli BL21(DE3)]
 gi|253325090|gb|ACT29692.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972940|gb|ACT38611.1| predicted carboxypeptidase [Escherichia coli B str. REL606]
 gi|253977154|gb|ACT42824.1| predicted carboxypeptidase [Escherichia coli BL21(DE3)]
 gi|299881260|gb|EFI89471.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|300317650|gb|EFJ67434.1| hypothetical protein HMPREF9547_01312 [Escherichia coli MS 175-1]
 gi|300450893|gb|EFK14513.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300462457|gb|EFK25950.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|301078159|gb|EFK92965.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|315619119|gb|EFU99699.1| putative peptidoglycan binding domain protein [Escherichia coli
           3431]
 gi|323938031|gb|EGB34293.1| ykud domain-containing protein [Escherichia coli E1520]
 gi|323942841|gb|EGB39006.1| ykud domain-containing protein [Escherichia coli E482]
 gi|323962917|gb|EGB58491.1| ykud domain-containing protein [Escherichia coli H489]
 gi|331038249|gb|EGI10469.1| putative amidase [Escherichia coli H736]
 gi|332342367|gb|AEE55701.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 615

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|170683737|ref|YP_001744245.1| hypothetical protein EcSMS35_2195 [Escherichia coli SMS-3-5]
 gi|170521455|gb|ACB19633.1| putative peptidoglycan binding domain [Escherichia coli SMS-3-5]
          Length = 615

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|157157051|ref|YP_001462144.1| hypothetical protein EcE24377A_1024 [Escherichia coli E24377A]
 gi|256020947|ref|ZP_05434812.1| hypothetical protein ShiD9_18662 [Shigella sp. D9]
 gi|301326639|ref|ZP_07219969.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|332282170|ref|ZP_08394583.1| conserved hypothetical protein [Shigella sp. D9]
 gi|157079081|gb|ABV18789.1| putative peptidoglycan binding domain [Escherichia coli E24377A]
 gi|300846684|gb|EFK74444.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|332104522|gb|EGJ07868.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 615

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|320202321|gb|EFW76892.1| L,D-transpeptidase YcbB [Escherichia coli EC4100B]
          Length = 615

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|301023047|ref|ZP_07186856.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|300397253|gb|EFJ80791.1| conserved hypothetical protein [Escherichia coli MS 69-1]
          Length = 615

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|218704353|ref|YP_002411872.1| hypothetical protein ECUMN_1119 [Escherichia coli UMN026]
 gi|293404229|ref|ZP_06648223.1| hypothetical protein ECGG_02618 [Escherichia coli FVEC1412]
 gi|298380010|ref|ZP_06989615.1| hypothetical protein ECFG_02813 [Escherichia coli FVEC1302]
 gi|300901645|ref|ZP_07119705.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|218431450|emb|CAR12328.1| putative exported enzyme [Escherichia coli UMN026]
 gi|291428815|gb|EFF01840.1| hypothetical protein ECGG_02618 [Escherichia coli FVEC1412]
 gi|298279708|gb|EFI21216.1| hypothetical protein ECFG_02813 [Escherichia coli FVEC1302]
 gi|300354938|gb|EFJ70808.1| conserved hypothetical protein [Escherichia coli MS 198-1]
          Length = 615

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|15800786|ref|NP_286800.1| hypothetical protein Z1272 [Escherichia coli O157:H7 EDL933]
 gi|15830262|ref|NP_309035.1| hypothetical protein ECs1008 [Escherichia coli O157:H7 str. Sakai]
 gi|168751189|ref|ZP_02776211.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4113]
 gi|168757018|ref|ZP_02782025.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4401]
 gi|168762937|ref|ZP_02787944.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4501]
 gi|168769921|ref|ZP_02794928.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4486]
 gi|168787355|ref|ZP_02812362.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC869]
 gi|195939660|ref|ZP_03085042.1| hypothetical protein EscherichcoliO157_25185 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208822650|ref|ZP_03262969.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|217326231|ref|ZP_03442315.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254792124|ref|YP_003076961.1| hypothetical protein ECSP_1029 [Escherichia coli O157:H7 str.
           TW14359]
 gi|261227428|ref|ZP_05941709.1| predicted carboxypeptidase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256149|ref|ZP_05948682.1| predicted carboxypeptidase [Escherichia coli O157:H7 str. FRIK966]
 gi|12514097|gb|AAG55410.1|AE005282_5 putative amidase [Escherichia coli O157:H7 str. EDL933]
 gi|13360467|dbj|BAB34431.1| putative amidase [Escherichia coli O157:H7 str. Sakai]
 gi|188014739|gb|EDU52861.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4113]
 gi|189355931|gb|EDU74350.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4401]
 gi|189361134|gb|EDU79553.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4486]
 gi|189366781|gb|EDU85197.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4501]
 gi|189372669|gb|EDU91085.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC869]
 gi|208738135|gb|EDZ85818.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209774750|gb|ACI85687.1| putative amidase [Escherichia coli]
 gi|209774752|gb|ACI85688.1| putative amidase [Escherichia coli]
 gi|209774756|gb|ACI85690.1| putative amidase [Escherichia coli]
 gi|217322452|gb|EEC30876.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254591524|gb|ACT70885.1| predicted carboxypeptidase [Escherichia coli O157:H7 str. TW14359]
 gi|320637793|gb|EFX07585.1| murein L,D-transpeptidase [Escherichia coli O157:H7 str. G5101]
 gi|326338180|gb|EGD62009.1| L,D-transpeptidase YcbB [Escherichia coli O157:H7 str. 1125]
          Length = 615

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|16128892|ref|NP_415445.1| murein L,D-transpeptidase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89107775|ref|AP_001555.1| predicted carboxypeptidase [Escherichia coli str. K-12 substr.
           W3110]
 gi|170080583|ref|YP_001729903.1| carboxypeptidase [Escherichia coli str. K-12 substr. DH10B]
 gi|238900183|ref|YP_002925979.1| putative carboxypeptidase [Escherichia coli BW2952]
 gi|2506630|sp|P22525|YCBB_ECOLI RecName: Full=Probable L,D-transpeptidase YcbB
 gi|1787155|gb|AAC74011.1| murein L,D-transpeptidase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|4062492|dbj|BAA35671.1| predicted carboxypeptidase [Escherichia coli str. K12 substr.
           W3110]
 gi|169888418|gb|ACB02125.1| predicted carboxypeptidase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238862186|gb|ACR64184.1| predicted carboxypeptidase [Escherichia coli BW2952]
 gi|260449929|gb|ACX40351.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1]
 gi|315135573|dbj|BAJ42732.1| hypothetical protein ECDH1ME8569_0876 [Escherichia coli DH1]
          Length = 615

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|187776221|ref|ZP_02801228.2| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4196]
 gi|208809460|ref|ZP_03251797.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208815467|ref|ZP_03256646.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|209399966|ref|YP_002269597.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|187768375|gb|EDU32219.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4196]
 gi|208729261|gb|EDZ78862.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732115|gb|EDZ80803.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|209161366|gb|ACI38799.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|320192589|gb|EFW67230.1| L,D-transpeptidase YcbB [Escherichia coli O157:H7 str. EC1212]
 gi|326346157|gb|EGD69895.1| L,D-transpeptidase YcbB [Escherichia coli O157:H7 str. 1044]
          Length = 611

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 305 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 364

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 365 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 421

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 422 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 481

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 482 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 541

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 542 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|331662339|ref|ZP_08363262.1| putative amidase [Escherichia coli TA143]
 gi|331060761|gb|EGI32725.1| putative amidase [Escherichia coli TA143]
          Length = 615

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|307131496|ref|YP_003883512.1| putative carboxypeptidase [Dickeya dadantii 3937]
 gi|306529025|gb|ADM98955.1| predicted carboxypeptidase [Dickeya dadantii 3937]
          Length = 562

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 183/352 (51%), Gaps = 29/352 (8%)

Query: 94  WPEL----PIRPLHLGNSSVSVQRLRERLIISGDLD------------PSKGLS-VAFDA 136
           WP+L     +RP   G+ S ++  L+E L+ +G L+             S  +S + ++ 
Sbjct: 209 WPKLILADSLRP---GDESSALPVLKEILLRTGMLNQDGAAMPLFNEASSGNVSPLRYEG 265

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            V  AVK FQ   GL   G++   T + +NV   +R   L +N+ R++ L+  K+    +
Sbjct: 266 EVVEAVKRFQHSQGLQDDGVIGKRTRDWLNVSSQMRATLLALNIQRLR-LVPDKVS-SGI 323

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VNIP  SL   +NG   L S VIVG+  R+TP+++S ++ ++ NP W +P ++ ++D++
Sbjct: 324 VVNIPNYSLSYYQNGAEILSSRVIVGQPKRKTPLMNSSLSNVVMNPPWNVPTTLTRQDII 383

Query: 257 ALLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
             + QDP YL+ +   ++    E  + +    +DW      NF +  RQ PG  N++   
Sbjct: 384 PKVIQDPGYLQRHGYTVLSDWTESAQPIDPSMIDWPMVSAGNFPYRLRQAPGDSNSLGRY 443

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K    + +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I   
Sbjct: 444 KFNMPNTDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASELAALLLQDA-GWNNARISST 502

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGIIPL 422
           ++   TT V +   VPV+F Y++AW   D   QFR DIY  D+ V +G + L
Sbjct: 503 LEQGNTTYVAVRQRVPVNFYYLTAWVADDGKPQFRTDIYNYDDTVKIGALAL 554


>gi|323973200|gb|EGB68392.1| ykud domain-containing protein [Escherichia coli TA007]
          Length = 615

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|293414205|ref|ZP_06656854.1| hypothetical protein ECDG_00758 [Escherichia coli B185]
 gi|331651945|ref|ZP_08352964.1| putative amidase [Escherichia coli M718]
 gi|291434263|gb|EFF07236.1| hypothetical protein ECDG_00758 [Escherichia coli B185]
 gi|331050223|gb|EGI22281.1| putative amidase [Escherichia coli M718]
          Length = 615

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|269102554|ref|ZP_06155251.1| hypothetical amidase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268162452|gb|EEZ40948.1| hypothetical amidase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 588

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 157/302 (51%), Gaps = 10/302 (3%)

Query: 122 GDLDPSK------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           GDLD +         S++    +  A+K FQ R+GL   G++  ST + + +P     R+
Sbjct: 266 GDLDQANYDKLMAAKSISNTGVMNDAIKHFQKRYGLSADGIIGKSTAQQLAIPYGELARR 325

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L +N+ R   +        ++LVNIP   L+  ENGKV   S VIVGR  R T +  S I
Sbjct: 326 LALNMQRANVIAPFAKDKAHILVNIPDYMLKVYENGKVVFDSKVIVGRESRPTNLFSSSI 385

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE--KGKEVFVEEVDWNSPEP 293
           N ++ NPYW +P +I QKD++   +++P YL  +NI +I+      E+ V  ++W++  P
Sbjct: 386 NTMVVNPYWNVPITIKQKDVIPKAKRNPGYLAAHNIKVINSWRDRTEIPVSSINWSAVNP 445

Query: 294 PNF--IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
            +F   F+Q PG  N++   K    +    ++HDTP   LF+   R  +SGCVRV    D
Sbjct: 446 KSFPHEFQQGPGPHNSLGMVKFLMPNDYAIFLHDTPARGLFSKTKRDLSSGCVRVARAHD 505

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L  ++L      S    + + K +    V L+  + V FVY++ W  +D  +Q R+DIY 
Sbjct: 506 LADFVLDYQNRPSMRTFDSMRKDKGQDTVSLSRRIGVDFVYLTGWVNQDGQVQMREDIYN 565

Query: 412 LD 413
            D
Sbjct: 566 YD 567


>gi|331672461|ref|ZP_08373251.1| putative amidase [Escherichia coli TA280]
 gi|284920776|emb|CBG33839.1| putative exported protein [Escherichia coli 042]
 gi|331070367|gb|EGI41732.1| putative amidase [Escherichia coli TA280]
          Length = 615

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|304393662|ref|ZP_07375590.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303294669|gb|EFL89041.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 527

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 177/349 (50%), Gaps = 13/349 (3%)

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVA 133
            Q  + +A Y+ +++RGGW P      L  G +   V  +R+ L   G D+   +G+  A
Sbjct: 177 GQLRQMLAGYRSLMARGGWQPITEGITLKPGMTDARVNEMRQNLAARGYDV---RGVEFA 233

Query: 134 --FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +D  +  AVK FQ RHGL   G+   ++  A++V    R+ Q+ +NL R +  L + +
Sbjct: 234 DLYDEGLVDAVKHFQKRHGLASDGVAGPASFRALSVTAAQRVDQIAINLERWR-WLPRDL 292

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G  +VLVN     +  +   ++  +  VIVG+   Q+P+  S I+   FNP W +P SI 
Sbjct: 293 GKAHVLVNQAGFEMFTMNGTEIYDKRRVIVGKPFHQSPMFSSSISYAEFNPTWTVPLSIA 352

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            K+M+  +R +P YL + N  +    G   +++    VDW++     F +R  Q+PG  N
Sbjct: 353 GKEMLPKIRNNPAYLVEKNYSLYSGWGNNSQKLNPYAVDWSAVSAKRFPYRIVQEPGPRN 412

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+   K  F ++ + Y+HDTP   LF+   R  + GC+RV   +D    L +     +  
Sbjct: 413 ALGQVKFIFPNKFSVYLHDTPSRNLFSRTGRAFSHGCIRVDKPLDFARKLYELQGGMNPS 472

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            +  +++++K   V    ++PVH  Y +AW  +D +  F +D+Y  D +
Sbjct: 473 QVTPIIESKKRKRVNFKRKMPVHLAYFTAWINEDGVPLFYEDVYKRDKL 521


>gi|304310214|ref|YP_003809812.1| hypothetical protein HDN1F_05650 [gamma proteobacterium HdN1]
 gi|301795947|emb|CBL44148.1| conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 560

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 177/351 (50%), Gaps = 24/351 (6%)

Query: 79  EKAIAFYQDILS-RGG--WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           + A+A Y+++ + R G   P LP + L  G++   +  L + L   GD   +   +  + 
Sbjct: 201 KNALAHYRELAAHRKGISLPSLP-KSLKPGDTWSGIPALADGLRYLGDFTGAPPKNNRYT 259

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             + + VK FQ  HGL   G++  ST  A++VP  +R+RQ+++++ R++ L EQ    R 
Sbjct: 260 HDLVAGVKHFQGGHGLGVDGIIGQSTWSALSVPFSVRVRQIELSMERMRWLSEQMADERA 319

Query: 196 VLVNIPAASLEAVENGKV---GLRSTVIVGR-VDRQTPILHSRINRIMFNPYWVIPRSII 251
           ++VNIP   L A   GK     L   V+VG+ V   TPIL + +  ++FNPYW +P SI 
Sbjct: 320 IVVNIPQFQLWAFP-GKTQASSLSMNVVVGKSVGNSTPILLNDVKSVVFNPYWNVPSSIT 378

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--------FIFRQDPG 303
           +K+M+  LR++P+YL   N+ M+          EV   +P P          +  RQ PG
Sbjct: 379 RKEMLPKLRENPEYLVSQNLEMVGNG-------EVIATAPTPEQIEAISKGIYRLRQRPG 431

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             NA+   K EF + +  YMHDTP    F+   R  + GC+R+ +   +  +LL   P W
Sbjct: 432 PGNALGRVKFEFPNSDAIYMHDTPNRGAFSRSRRDFSHGCIRLSDPEKMADFLLTGQPGW 491

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            +  + E +K+ +   V L   VPV   Y +A           +DIYG D+
Sbjct: 492 DKKRVSEAMKSDERRTVTLRNPVPVLIFYTTAMVDSTGRTVLLEDIYGYDS 542


>gi|320177116|gb|EFW52131.1| L,D-transpeptidase YcbB [Shigella dysenteriae CDC 74-1112]
          Length = 611

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 305 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 364

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 365 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 421

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 422 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 481

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 482 APGPRNSLGRYKFNMPSSEAIYLHDTPTHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 541

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 542 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|323190745|gb|EFZ76014.1| putative peptidoglycan binding domain protein [Escherichia coli
           RN587/1]
          Length = 615

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 155/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPVVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP+YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPRYLESHGYTLMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|260867097|ref|YP_003233499.1| putative carboxypeptidase [Escherichia coli O111:H- str. 11128]
 gi|257763453|dbj|BAI34948.1| predicted carboxypeptidase [Escherichia coli O111:H- str. 11128]
 gi|323175452|gb|EFZ61047.1| putative peptidoglycan binding domain protein [Escherichia coli
           1180]
          Length = 615

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYKNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|333001241|gb|EGK20809.1| putative peptidoglycan binding domain protein [Shigella flexneri
           VA-6]
          Length = 615

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|332095888|gb|EGJ00895.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           155-74]
          Length = 611

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 305 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 364

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 365 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 421

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 422 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 481

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 482 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 541

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 542 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYTYD 593


>gi|324019066|gb|EGB88285.1| hypothetical protein HMPREF9542_02261 [Escherichia coli MS 117-3]
          Length = 615

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSSG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|242239070|ref|YP_002987251.1| hypothetical protein Dd703_1632 [Dickeya dadantii Ech703]
 gi|242131127|gb|ACS85429.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
          Length = 564

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 173/342 (50%), Gaps = 24/342 (7%)

Query: 94  WPELPI-RPLHLGNSSVSVQRLRERLIISGDLD-------------PSKGLSVAFDAYVE 139
           WP L +   L  G+ S ++  LR+ L+ +G L+             PS   ++ +D  + 
Sbjct: 211 WPRLVLGETLRPGDESPALPVLRDILLRTGALNQGNVSMPLFNEAQPSGPEALRYDGELV 270

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLV 198
            AVK FQ   GL   G +   T + +NV    R   L +N+ R++ + +    G   ++V
Sbjct: 271 EAVKRFQRLQGLQDDGSIGKRTRDWLNVSSQTRATLLALNIQRLRLVPDNVNTG---IMV 327

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           NIP  SL    NG V L S VIVG+  R+TP++ S ++ ++ NP W +P ++ ++D++  
Sbjct: 328 NIPNYSLSYYLNGSVILSSRVIVGQPKRKTPLMSSSLSNVVMNPPWNVPTTLTRQDIIPK 387

Query: 259 LRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKI 313
           + QDP YL+ +   ++    E  +++    +DW      NF +  RQ PG  N++   K 
Sbjct: 388 VIQDPAYLQKHGYVLLSGWSEDAQQIDPAMIDWPMVSANNFPYRLRQAPGDNNSLGRYKF 447

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              + +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I   ++
Sbjct: 448 NMPNTDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASELAALLLQDA-GWNNARISSTLE 506

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              TT V +   +PV+F Y++AW   D   QFR DIY  D+ 
Sbjct: 507 QGNTTYVSIRQRIPVNFYYLTAWVADDGKPQFRTDIYNYDDT 548


>gi|238792383|ref|ZP_04636017.1| Peptidoglycan-binding domain 1 protein [Yersinia intermedia ATCC
           29909]
 gi|238728309|gb|EEQ19829.1| Peptidoglycan-binding domain 1 protein [Yersinia intermedia ATCC
           29909]
          Length = 603

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/278 (35%), Positives = 146/278 (52%), Gaps = 8/278 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ  HGL   G++   T E +NV    R   L +N+ R++ +L  ++    ++VNI
Sbjct: 311 AVKRFQQWHGLSDDGVIGVRTREWLNVSPQTRATLLALNIQRLR-ILPGRVD-NGIMVNI 368

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P S++++D++   R
Sbjct: 369 PNYSLNYYKNGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKAR 428

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
            D  Y + +   ++     E  V +   +DW+   P NF +  RQ PG  N++   K   
Sbjct: 429 YDAGYFQRHGYTVLSGWSNEAEVVDPSMIDWSMISPNNFPYRLRQAPGASNSLGRFKFNM 488

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +   +K  
Sbjct: 489 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDARVSSTLKQG 547

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            TT V +   VPV   Y++AW   D   QFR DIY  D
Sbjct: 548 DTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDIYNYD 585


>gi|293409302|ref|ZP_06652878.1| hypothetical protein ECEG_00235 [Escherichia coli B354]
 gi|291469770|gb|EFF12254.1| hypothetical protein ECEG_00235 [Escherichia coli B354]
          Length = 615

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITDSNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|194434397|ref|ZP_03066660.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1012]
 gi|194417381|gb|EDX33487.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1012]
 gi|320182006|gb|EFW56911.1| L,D-transpeptidase YcbB [Shigella boydii ATCC 9905]
          Length = 615

 Score =  162 bits (411), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYTYD 597


>gi|150026170|ref|YP_001296996.1| hypothetical protein FP2133 [Flavobacterium psychrophilum JIP02/86]
 gi|149772711|emb|CAL44194.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 566

 Score =  162 bits (411), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 175/355 (49%), Gaps = 43/355 (12%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   + L  S+ +V+ ++ RL+   D+  +  ++  +D   + AVK FQ RHGL P G++
Sbjct: 207 PKDKIALNKSNKAVKIIKSRLMYWHDMKQANTITNIYDKETQDAVKTFQSRHGLTPDGLI 266

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
              T+ A+N   + RI Q+  NL R +       G  Y+L+NIP  SL A++N     + 
Sbjct: 267 GKGTILALNFTKNQRIEQVISNLERWR-WFASDFGQNYLLINIPDYSLLAIKNNDTMQKQ 325

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            ++VG+  RQTPIL S+++ I  NP W +P +I+++D+     +D    K   + ++D K
Sbjct: 326 RIVVGKDTRQTPILESKVSNINLNPNWTVPPTILKEDIYPDAIKDKGAFKKKGLVILDHK 385

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            KE  +    W   +   + + Q+PGK +++   KI F ++ + Y+HDT     F    R
Sbjct: 386 NKE--INPWSWTIEDAKKYKYVQNPGKNSSLGLMKINFPNKYSVYLHDTNHRDFFGLNYR 443

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV------------------------- 372
             +SGCVR+   +++  +L+ +   W+   I++                           
Sbjct: 444 SLSSGCVRLEKPLEMAEYLINNPEKWNLKTIQDTTDINHYNKLQKEKEKKIAIKNAKLLA 503

Query: 373 --------------KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                         +  KT  V++A ++ +H +Y +AW  K++ +QFR+DIY LD
Sbjct: 504 KNPLLVIPEKTYPKQELKTIVVRIADDIFIHQLYWTAWLQKET-LQFREDIYCLD 557


>gi|237730888|ref|ZP_04561369.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906427|gb|EEH92345.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 622

 Score =  162 bits (411), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 206/435 (47%), Gaps = 53/435 (12%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K N+ LY    Y       +L   PI       +IN+   ++ N + 
Sbjct: 201 MMGYLHFIANIPVKGNRWLYSDKPY-------ALTTPPI------SVINQWQVALDNGQL 247

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG----WPEL-PIRPLHLGNS 107
            +F+A +                 Q  +  A ++ +L   G    WP+L     L  G  
Sbjct: 248 TSFVASL---------------APQHPQYAAMHESLLKLVGDTRPWPQLTSTATLRPGEW 292

Query: 108 SVSVQRLRERLIISGDLDPSKGLSV-----AFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           S  +  LRE L  +G L+P+   S       +D  +  AVK FQ   GL   G +  +T 
Sbjct: 293 SNDIPALREILRRTGMLEPAVSTSGKEGRGTYDRELVDAVKRFQTWQGLGADGAIGPATR 352

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           + +NV    R   L +N+ R++ LL  ++    ++VNIPA SL   +NG   L S VIVG
Sbjct: 353 DWLNVTPAQRAGVLALNIQRLR-LLPSELSTG-IMVNIPAYSLVYYQNGNQVLASRVIVG 410

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   ++     +  
Sbjct: 411 RPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKET 470

Query: 283 VE--EVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           ++  +VDW +    N  F F+Q PG  N++   K    S +  Y+HDTP   LF    R 
Sbjct: 471 IDPWQVDWATITASNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDTRA 530

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVRV    +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+  
Sbjct: 531 LSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVG 589

Query: 399 KDSIIQFRDDIYGLD 413
            D   Q+R DIY  D
Sbjct: 590 PDGRTQYRTDIYNYD 604


>gi|332162190|ref|YP_004298767.1| hypothetical protein YE105_C2568 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318606244|emb|CBY27742.1| L,D-transpeptidase YcbB [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325666420|gb|ADZ43064.1| hypothetical protein YE105_C2568 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 623

 Score =  162 bits (411), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 156/306 (50%), Gaps = 14/306 (4%)

Query: 119 IISGDLDPSKGLSVA------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           + SG + PS     A      +   +  AVK FQ  HGL   G++ + T E +NV    R
Sbjct: 303 VTSGVVAPSSAPVTATVTDNVYTPELMEAVKRFQRWHGLSDDGVIGARTREWLNVSPQTR 362

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
              L +N+ R++ +L  ++    ++VNIP  SL   +NG   L S VIVGR  R+TP++ 
Sbjct: 363 ATLLALNIQRLR-ILPGRVD-NGIMVNIPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMS 420

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE---VDWN 289
           S +N ++ NP W +P S++++D++   R D  Y + +   ++     +  V +   +DW+
Sbjct: 421 SALNNVVVNPPWNVPTSLVRQDIVPKARYDSSYFQRHGYTVLSGWSNDAEVVDPSMIDWS 480

Query: 290 SPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
              P NF +  RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV 
Sbjct: 481 MISPNNFPYRLRQAPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVN 540

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
              DL   LL+D   W+   +   +K   TT V +   VPV   Y++AW   D   QFR 
Sbjct: 541 KASDLANMLLQDA-GWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRT 599

Query: 408 DIYGLD 413
           DIY  D
Sbjct: 600 DIYNYD 605


>gi|257095730|ref|YP_003169371.1| peptidoglycan-binding domain 1 protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048254|gb|ACV37442.1| Peptidoglycan-binding domain 1 protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 542

 Score =  162 bits (411), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 166/346 (47%), Gaps = 12/346 (3%)

Query: 80  KAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +A+A Y+ +     W    P LP   L  G +   V RL  RLI+  DL         ++
Sbjct: 171 QALAAYRAVAGHPAWQQELPPLPSGKLAPGQAYSGVSRLTARLIVLADLPVGTLPPPRYE 230

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +   +K FQ RHGL P G++   T E + V    R+ QL++ L R++    Q+ G R 
Sbjct: 231 GSLVDGIKSFQERHGLTPDGVIGKETFEQLKVSPGARVGQLELALERLRWTPLQRQG-RI 289

Query: 196 VLVNIPAASLEAVE----NGKVGLRSTVIVGRVDR-QTPILHSRINRIMFNPYWVIPRSI 250
           ++VN+P   L   +        G    VIVG   + +TP+  + +  + F+PYW +P SI
Sbjct: 290 IVVNVPEFMLHTYQMNDKGSDPGPVMRVIVGNARKTRTPLFDAEMRFVEFSPYWNVPPSI 349

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINAMA 309
            + + +  LR DP Y +     ++   G+ +  + E   ++        RQ PG  NA+ 
Sbjct: 350 SRGETLPRLRSDPGYFERQGFELVTSDGRVLGSLPEGGLDALAQGRMRIRQKPGARNALG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F + +N Y+H TP   LF    R  + GC+RV    DL  ++L   P W+R  I 
Sbjct: 410 DIKFVFPNTDNIYLHHTPTAQLFKRDRRDFSHGCIRVEAPADLAEFVLAGEPEWTRQRII 469

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           + +K  K+  ++L  E+PV   Y +A + +D  + F  DIYGLD  
Sbjct: 470 QAMKRGKSATLRLKEEIPVVIAYRTA-TVRDGRVHFFPDIYGLDRA 514


>gi|123441868|ref|YP_001005851.1| hypothetical protein YE1557 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088829|emb|CAL11635.1| putative exported protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 623

 Score =  162 bits (411), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 156/306 (50%), Gaps = 14/306 (4%)

Query: 119 IISGDLDPSKGLSVA------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           + SG + PS     A      +   +  AVK FQ  HGL   G++ + T E +NV    R
Sbjct: 303 VTSGVVAPSSAPVTATVTDNVYTPELMEAVKRFQRWHGLSDDGVIGARTREWLNVSPQTR 362

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
              L +N+ R++ +L  ++    ++VNIP  SL   +NG   L S VIVGR  R+TP++ 
Sbjct: 363 ATLLALNIQRLR-ILPGRVD-NGIMVNIPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMS 420

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE---VDWN 289
           S +N ++ NP W +P S++++D++   R D  Y + +   ++     +  V +   +DW+
Sbjct: 421 SALNNVVVNPPWNVPTSLVRQDIVPKARYDSSYFQRHGYTVLSGWSNDAEVVDPSMIDWS 480

Query: 290 SPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
              P NF +  RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV 
Sbjct: 481 MISPNNFPYRLRQAPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVN 540

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
              DL   LL+D   W+   +   +K   TT V +   VPV   Y++AW   D   QFR 
Sbjct: 541 KASDLANMLLQDA-GWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRT 599

Query: 408 DIYGLD 413
           DIY  D
Sbjct: 600 DIYNYD 605


>gi|261253179|ref|ZP_05945752.1| hypothetical protein VIA_003204 [Vibrio orientalis CIP 102891]
 gi|260936570|gb|EEX92559.1| hypothetical protein VIA_003204 [Vibrio orientalis CIP 102891]
          Length = 517

 Score =  162 bits (411), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 172/316 (54%), Gaps = 12/316 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           L N  V +QRL    I+  DL   +     FD  ++ AVK FQ  HGL P G++   T++
Sbjct: 205 LENRDVLIQRLS---IVDVDLIDVRKDIRWFDQTLKVAVKQFQNLHGLKPDGIIGPETIK 261

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            +N+P++ R+  L +N  RI+    Q+  +  ++VN+P+  +    +G+    S V+VG+
Sbjct: 262 WINLPIEKRLSTLAINAERIRYWPSQRDTI--IVVNVPSFQMTYWSSGEEVFESKVVVGK 319

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
           ++R TP++  R++ ++ NP W +P  I+ +D++  ++ D  YL   NI +I + G +  +
Sbjct: 320 IERPTPLMQIRLDSLILNPTWNVPWKIMVEDIIPKVQHDRAYLTKQNIKIIPKWGSDEII 379

Query: 284 --EEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
             E +DW++  P +F +R  Q+ G  NA+   K    +R   ++HDTP   LF+   R  
Sbjct: 380 NPETIDWDNLNPSSFPYRMTQESGNSNALGLYKFNTPNRRAIFLHDTPSKSLFSRQQRAF 439

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGC+RV N       L++      R  ++E     ++ P+K  + VPVH +Y +AW  +
Sbjct: 440 SSGCIRVENADVFAKRLIEAQGVSRRAKLDEPPGPNQSIPLK--SRVPVHIIYQTAWYEE 497

Query: 400 DSIIQFRDDIYGLDNV 415
            S + +R+DIY LD  
Sbjct: 498 GS-VHYREDIYRLDKA 512


>gi|84684826|ref|ZP_01012726.1| peptidoglycan binding protein, putative [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667161|gb|EAQ13631.1| peptidoglycan binding protein, putative [Rhodobacterales bacterium
           HTCC2654]
          Length = 539

 Score =  162 bits (410), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 170/331 (51%), Gaps = 11/331 (3%)

Query: 88  ILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           + + GGW P +    L  G+   +V +LR RL+  G +D S   +  +D  ++ AV+ FQ
Sbjct: 196 VRAEGGWGPTVQAGSLRPGDQGQAVIQLRNRLVTMGYMDRSA--TQTYDENIQRAVQRFQ 253

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
             HGL   G+    T++A+N PV+ R+ ++ V + R ++ +  + G RYV VN+   +  
Sbjct: 254 TNHGLTADGVAGGDTVKAINTPVEDRLERIIVAMER-ERWMNIERGDRYVWVNLTTFTAR 312

Query: 207 AVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
            V+ GKV   +  +VG+     +TP     +  ++ NP W +PRSII  + +  LR +  
Sbjct: 313 VVDGGKVTFETRSVVGQNLSTHRTPEFSDMMEHMVINPSWYVPRSIIVNEYLPALRANSG 372

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTY 322
                ++ + D +G+ V     D++     NF F  RQ PG  NA+   K  F ++ N Y
Sbjct: 373 --AAGHLLITDARGRTV-SRATDFSQYSARNFPFDMRQPPGPGNALGYVKFMFPNQYNIY 429

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDTP   LF   VR  + GCVR++   D    +L           + +++T + T V+L
Sbjct: 430 LHDTPSKSLFGREVRTFSHGCVRLQQPFDFAYTMLAPQEADPEGFFQSILRTGQETKVEL 489

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              VPVH VY +A++     + +R+D+YG D
Sbjct: 490 DEPVPVHLVYRTAFTDTRGEMNYRNDMYGRD 520


>gi|300925397|ref|ZP_07141282.1| hypothetical protein HMPREF9548_03475 [Escherichia coli MS 182-1]
 gi|300418467|gb|EFK01778.1| hypothetical protein HMPREF9548_03475 [Escherichia coli MS 182-1]
          Length = 615

 Score =  162 bits (410), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVENPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|326797793|ref|YP_004315612.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
 gi|326548557|gb|ADZ76942.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
          Length = 548

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 168/334 (50%), Gaps = 23/334 (6%)

Query: 85  YQDILSRGGWPELPI----RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           Y+++ ++  W   PI    +   +G+SS  +++++ RL + GD      L+  +D+ + S
Sbjct: 223 YRELAAKHKWN--PIIADKKSYKIGDSSTVLRQIKTRLFLLGDYQ-GDTLTNLYDSTLFS 279

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
            V+ FQ RHGL P G + S T+  +NV    R++Q+ VN+ R  + L   +   Y+ VNI
Sbjct: 280 GVRSFQSRHGLRPDGAIGSGTINELNVLPAARLKQIAVNMER-SRWLPVSLKTDYLAVNI 338

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   L       +     V+VG+   +T I H  +  ++F+PYW +P SI++ +++  +R
Sbjct: 339 PEFKLHVYHADSLLWSCNVVVGKAMHKTVIFHGDVKYVVFSPYWNVPPSIVKNEILPGMR 398

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +D  Y+  +N+ +  + G               PN   RQ PG  N++   K  F +  N
Sbjct: 399 RDRNYIAKHNMEITGKSGG-------------LPNV--RQKPGPKNSLGLVKFLFPNSYN 443

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HD+P   L+N   R  + GC+RV     L  +LL+   TW++  I + +   K   V
Sbjct: 444 IYLHDSPAKSLYNESSRAFSHGCIRVSEPEKLANFLLRSDSTWNKESIYKAMHAGKEKYV 503

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L   VPV   Y +A+  ++  I FR DIY  D+
Sbjct: 504 TLKKTVPVFIAYFTAFIDREGKINFRKDIYDRDD 537


>gi|215486050|ref|YP_002328481.1| hypothetical protein E2348C_0918 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215264122|emb|CAS08466.1| predicted carboxypeptidase [Escherichia coli O127:H6 str. E2348/69]
          Length = 615

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPVVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTLMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|82777551|ref|YP_403900.1| hypothetical protein SDY_2332 [Shigella dysenteriae Sd197]
 gi|81241699|gb|ABB62409.1| putative amidase [Shigella dysenteriae Sd197]
          Length = 615

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 KVPPTLARKDILPKVRNDPGYLEIHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|149203870|ref|ZP_01880839.1| peptidoglycan binding protein, putative [Roseovarius sp. TM1035]
 gi|149142987|gb|EDM31029.1| peptidoglycan binding protein, putative [Roseovarius sp. TM1035]
          Length = 522

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 175/333 (52%), Gaps = 10/333 (3%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + +++ GGW   +    L  G+S  +V  LR RLI  G LD S   +  +D  ++ AV+ 
Sbjct: 176 EQLVAEGGWGAAVSAEKLRPGDSGPAVIALRNRLIAMGYLDRSAAQT--YDMRLQQAVQA 233

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL+  G+  S+TL A+N P   R++ + V + R + L E++ G R++LVN+   S
Sbjct: 234 FQGDHGLETDGIAGSTTLAAVNTPATERLKSVIVAMERERWLSEER-GQRHILVNLTDFS 292

Query: 205 LEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              ++N  V   +  ++G+ D  R++P     +  ++ NP W +P SI   + +  ++++
Sbjct: 293 ARILDNDSVTFATRAVIGKNDQNRRSPEFSDEMEYMVINPTWHVPYSIAVNEYLPQMQRN 352

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P     +++ + +  G+EV    V++ +    NF F  +Q P + NA+   K  F ++ N
Sbjct: 353 PG--AASHLKLYNRNGREVSRGAVNFGAYNARNFPFAIKQPPSERNALGLVKFMFPNKYN 410

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP+  LF+   R  + GC+R+    D    LL    +  +     V+ T + T V
Sbjct: 411 IYLHDTPQKALFDLEKRDFSHGCIRLHQPFDFAYALLGRQESDPKAFFHSVLGTGRETYV 470

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +L   VPVH +Y +A++      Q+R D+YG D
Sbjct: 471 QLEQHVPVHIIYRTAFTQAQGRPQYRGDVYGRD 503


>gi|170769178|ref|ZP_02903631.1| putative peptidoglycan binding domain [Escherichia albertii
           TW07627]
 gi|170121830|gb|EDS90761.1| putative peptidoglycan binding domain [Escherichia albertii
           TW07627]
          Length = 615

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 157/293 (53%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+++ + +AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYNSELVNAVKRFQAWQGLGADGTIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPAELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++     +  ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSKEAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    +L   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASELANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|330445733|ref|ZP_08309385.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489924|dbj|GAA03882.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 579

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 190/394 (48%), Gaps = 34/394 (8%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK----ETIAQTEKAIAFYQDILSRG 92
           D  I E  H+    R   F++R+    D  I +++       I      +  ++ I    
Sbjct: 188 DTFIEELLHNHEQQRLRYFISRLKPHDDEYIELVAALDELNEIKDMRWPVFLFKGI---- 243

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA------FDAYVESAVKLFQ 146
                 IRP    N+   V  + E L   GD+ PS+   +           V  A+K FQ
Sbjct: 244 ------IRPGQYVNNMDGVVTVLETL---GDMTPSEARKIRTQKRKRLSGSVVIAIKRFQ 294

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYVLVNIPAASL 205
            RHGL   G++   T + + + +  RIR L +N  R++   +  K G   V+VNIP+  +
Sbjct: 295 ERHGLKSDGVIGPQTQQWLALSLKQRIRLLALNAQRLRLWSVTPKTG---VVVNIPSYYM 351

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
               NG+  L S VIVGR  RQTP++ S I  ++FNPYW +P SI++KD+M  +R++  Y
Sbjct: 352 NLWLNGEKVLGSKVIVGRPSRQTPMMGSDIQSVVFNPYWNVPNSIMKKDIMPKVRRNRSY 411

Query: 266 LKDNNIHMIDEKG--KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNT 321
           L  NN  +I   G  +++ +  + ++   P  F +  RQ PGK NA+   K  F +    
Sbjct: 412 LSRNNYEVIKGWGSAQKISINSIPYHLLSPNRFPYRLRQKPGKRNALGLFKFNFPNSQAI 471

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
           Y+HDT    LFN   R  +SGC+RV     L   LL+ + + S      + ++RKT  + 
Sbjct: 472 YLHDTSSRSLFNKHERALSSGCIRVEQAKSLAKVLLEYSGS-SEQRFNNLSRSRKTRTIV 530

Query: 382 L--ATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L     VPV  +Y +AW  +  ++ +R DIY  D
Sbjct: 531 LGDGKSVPVDLIYQTAWVDELGLVNYRSDIYKYD 564


>gi|312969009|ref|ZP_07783216.1| putative peptidoglycan binding domain protein [Escherichia coli
           2362-75]
 gi|312286411|gb|EFR14324.1| putative peptidoglycan binding domain protein [Escherichia coli
           2362-75]
          Length = 611

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 305 PAPVVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 364

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 365 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 421

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 422 NVPPTLARKDILPKVRNDPGYLESHGYTLMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 481

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 482 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 541

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 542 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|259908907|ref|YP_002649263.1| hypothetical protein EpC_22600 [Erwinia pyrifoliae Ep1/96]
 gi|224964529|emb|CAX56039.1| Peptidoglycan-binding domain 1 protein [Erwinia pyrifoliae Ep1/96]
 gi|283478902|emb|CAY74818.1| Uncharacterized protein ycbB [Erwinia pyrifoliae DSM 12163]
          Length = 615

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/280 (34%), Positives = 150/280 (53%), Gaps = 8/280 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           A+K FQ   GL+  G +   T E +NV    R   L +N+ R++ LL   M    ++VNI
Sbjct: 323 ALKRFQRWQGLEADGAIGMRTREWLNVSPQQRATLLALNIQRLR-LLPDDMQ-NGIMVNI 380

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W +P ++++KD++  ++
Sbjct: 381 PNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVRKDIVPKVK 440

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
           +DP YL  +   ++     E  V +   ++W++    +F +  RQ PG  N++   K   
Sbjct: 441 RDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSTVSAASFPYRIRQAPGATNSLGRYKFNM 500

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   I   +K  
Sbjct: 501 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLLRDV-GWNDARISGTLKEG 559

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            T  V +   +PV+  Y++AW  +D   Q+R DIY  DN 
Sbjct: 560 NTRFVPIRQRIPVNLYYLTAWVAEDGQPQYRTDIYNYDNT 599


>gi|156934583|ref|YP_001438499.1| hypothetical protein ESA_02417 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532837|gb|ABU77663.1| hypothetical protein ESA_02417 [Cronobacter sakazakii ATCC BAA-894]
          Length = 664

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 155/287 (54%), Gaps = 8/287 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  + +AVK FQ   GL   G++  ST + +NV    R   L +N+ R++ LL  K+  
Sbjct: 365 YDKDLVAAVKRFQKWQGLGADGVIGESTRDWLNVTPAQRAALLALNIQRLR-LLPGKLST 423

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIP  SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +K
Sbjct: 424 G-IMVNIPEYSLVYYQNGNQVLASRVIVGRPDRKTPLMSSALNNVVVNPPWNVPPTLARK 482

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPN--FIFRQDPGKINAM 308
           D++  +  DP YL+ +   +++  G    V +   VDW +  P N  F F+Q PG  N++
Sbjct: 483 DILPKVWNDPGYLESHGYTVLNGWGSNADVVDPWMVDWATITPSNLPFRFQQAPGAHNSL 542

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I
Sbjct: 543 GRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDSRI 601

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            + +K   T  V +   +PV+  Y++A+  +D   Q+R DIY  D+ 
Sbjct: 602 SQTLKEGNTRYVNIPQTIPVNLYYLTAFIGEDGRPQYRTDIYNYDHT 648


>gi|309787798|ref|ZP_07682408.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1617]
 gi|308924197|gb|EFP69694.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1617]
          Length = 610

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 304 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 363

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 364 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 420

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 421 KVPPTLARKDILPKVRNDPGYLEIHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 480

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 481 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 540

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 541 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 592


>gi|323185369|gb|EFZ70733.1| putative peptidoglycan binding domain protein [Escherichia coli
           1357]
          Length = 615

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  ++D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRASYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|331646190|ref|ZP_08347293.1| putative amidase [Escherichia coli M605]
 gi|330910705|gb|EGH39215.1| l,D-transpeptidase YcbB [Escherichia coli AA86]
 gi|331044942|gb|EGI17069.1| putative amidase [Escherichia coli M605]
          Length = 615

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 164/315 (52%), Gaps = 12/315 (3%)

Query: 107 SSVSVQRLRERLI---ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           S+V+V+    + +   I+    P+  +  A+D  +  AVK FQ   GL   G +  +T +
Sbjct: 287 SAVTVETAETKPMDKQITSRSKPAPVVRAAYDNELVEAVKRFQTWQGLGADGAIGPATRD 346

Query: 164 AMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            +NV    R   L +N+ R++ L  E   G   ++VNIPA SL   +NG   L S VIVG
Sbjct: 347 WLNVTPAQRAGVLALNIQRLRLLPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVG 403

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   ++        
Sbjct: 404 RPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREA 463

Query: 283 VE--EVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           ++  +VDW++    N  F F+Q PG  N++   K    S    Y+HDTP   LF    R 
Sbjct: 464 IDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRA 523

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV+  Y++A+  
Sbjct: 524 LSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVG 582

Query: 399 KDSIIQFRDDIYGLD 413
            D   Q+R DIY  D
Sbjct: 583 ADGRTQYRTDIYNYD 597


>gi|110679848|ref|YP_682855.1| peptidoglycan binding domain-containing protein [Roseobacter
           denitrificans OCh 114]
 gi|109455964|gb|ABG32169.1| peptidoglycan binding domain protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 537

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 182/366 (49%), Gaps = 11/366 (3%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQ 112
           NF      G    +P  + E  A  ++ +   + ++++GGW P +  + L  G+   SV 
Sbjct: 160 NFAKSSPKGFFKALPPQTGEYNALMKQKLVL-EGLVAKGGWGPTVKAKKLEPGDQGASVV 218

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            LR+RLI  G L  S   +  +DA + +AV  FQ  HGL   G+V   TL  +N  V  R
Sbjct: 219 ALRDRLIRMGYLKRSA--ASTYDAAMTAAVVRFQADHGLAQDGIVGRGTLAEINTSVRKR 276

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPI 230
           ++ + V + R ++ + ++ G R++ VN+   + + ++ GKV   +  ++G  D  RQ+P 
Sbjct: 277 LQAVIVAMER-ERWVNKERGTRHIEVNLTDFTAKIIDKGKVTFSTRSVIGARDAKRQSPE 335

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
               +  ++ NP W +PRSI   + +  L+QDP  +  N++ + D  G+++    VD+  
Sbjct: 336 FSDVMEFMVINPSWFVPRSIATGEYLPELQQDPNAV--NHLIITDRSGRQIDRANVDFTK 393

Query: 291 PEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                F +  RQ P + NA+   K  F ++ N Y+HDTP   LF    R  + GC+R+ +
Sbjct: 394 YTERTFPYAMRQPPSRSNALGLVKFMFPNKYNIYLHDTPAKNLFGRETRAYSHGCIRLAD 453

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
             +    LL           ++ + T K T + L   VPVH +Y +A +     IQ+R D
Sbjct: 454 PFEFAYALLAKQSGDPEGLFQKTLATGKETQLNLKKPVPVHIIYRTAVADSKGRIQYRRD 513

Query: 409 IYGLDN 414
           +YG D 
Sbjct: 514 VYGRDG 519


>gi|83952122|ref|ZP_00960854.1| peptidoglycan binding protein, putative [Roseovarius nubinhibens
           ISM]
 gi|83837128|gb|EAP76425.1| peptidoglycan binding protein, putative [Roseovarius nubinhibens
           ISM]
          Length = 523

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 174/330 (52%), Gaps = 9/330 (2%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           +L  G  PE+P + L  G S  +V  +R RL+I G +   +  S  +DA +  AV+ FQ 
Sbjct: 180 MLQGGFGPEVPAKSLKRGQSGPAVVAMRNRLVIMGFM--PRSASQEYDAKLAEAVQAFQA 237

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
            HGL   G   ++T+  +N  V+ R++ + V + R ++ + Q  G R+VLVN+   S   
Sbjct: 238 AHGLVADGDAGAATVAEINTSVETRLKSILVAMER-ERWINQPRGDRHVLVNLTDFSARI 296

Query: 208 VENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
           V++ +V  ++  ++G    DR++P     +  +  NP W +PRSI  K+ +  ++++P  
Sbjct: 297 VDHDEVTFQTRAVIGLNDSDRRSPEFSDVMEYMEINPTWNVPRSITVKEYLPQMQRNPN- 355

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYM 323
               ++ + + +G++V    V++N+     F F  +Q P   NA+   K  F ++ N Y+
Sbjct: 356 -AAGHLKLYNSRGQQVSRANVNFNAYTARTFPFALKQPPSNRNALGLVKFMFPNKYNIYL 414

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF    R  + GC+R+++  D    LL       +     V+ T + T V+L 
Sbjct: 415 HDTPAKSLFQRNKRDFSHGCIRLQDPFDFAYALLARQEEDPKGFFHRVLNTGQQTQVRLK 474

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            +VPVH +Y +A++     +Q+R+D+YG D
Sbjct: 475 KQVPVHIIYRTAFTQAKGPMQYRNDVYGRD 504


>gi|315296218|gb|EFU55525.1| conserved hypothetical protein [Escherichia coli MS 16-3]
          Length = 615

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 153/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P   +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PVPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|323967172|gb|EGB62596.1| ykud domain-containing protein [Escherichia coli M863]
 gi|327253715|gb|EGE65344.1| putative peptidoglycan binding domain protein [Escherichia coli
           STEC_7v]
          Length = 615

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPVVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLFYLTAFVGADGRTQYRTDIYNYD 597


>gi|205352202|ref|YP_002226003.1| hypothetical protein SG0937 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856386|ref|YP_002243037.1| hypothetical protein SEN0899 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|205271983|emb|CAR36827.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206708189|emb|CAR32482.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326627246|gb|EGE33589.1| putative peptidoglycan binding domain-containing protein
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 616

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 155/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ 
Sbjct: 310 PAPAVRAAYDNELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRL 369

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 370 LPAELSTG---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPW 426

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q
Sbjct: 427 NVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWTTITPSNLPFRFQQ 486

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D 
Sbjct: 487 APGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA 546

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 547 -GWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 598


>gi|323976688|gb|EGB71776.1| ykud domain-containing protein [Escherichia coli TW10509]
          Length = 615

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A++  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYNNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|331682434|ref|ZP_08383053.1| putative amidase [Escherichia coli H299]
 gi|331080065|gb|EGI51244.1| putative amidase [Escherichia coli H299]
          Length = 615

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPVVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|198244692|ref|YP_002214919.1| hypothetical protein SeD_A1060 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197939208|gb|ACH76541.1| YcbB [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326622672|gb|EGE29017.1| YcbB [Salmonella enterica subsp. enterica serovar Dublin str. 3246]
          Length = 616

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 155/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ 
Sbjct: 310 PAPAVRAAYDNELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRL 369

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 370 LPAELSTG---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPW 426

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q
Sbjct: 427 NVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWTTITPSNLPFRFQQ 486

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D 
Sbjct: 487 APGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA 546

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 547 -GWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 598


>gi|26246952|ref|NP_752992.1| hypothetical protein c1067 [Escherichia coli CFT073]
 gi|227884110|ref|ZP_04001915.1| peptidoglycan binding domain protein [Escherichia coli 83972]
 gi|300978416|ref|ZP_07174264.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|301047814|ref|ZP_07194866.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|331656996|ref|ZP_08357958.1| putative amidase [Escherichia coli TA206]
 gi|26107352|gb|AAN79535.1|AE016758_139 Hypothetical protein ycbB [Escherichia coli CFT073]
 gi|227838862|gb|EEJ49328.1| peptidoglycan binding domain protein [Escherichia coli 83972]
 gi|300300306|gb|EFJ56691.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300409658|gb|EFJ93196.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|307552764|gb|ADN45539.1| putative peptidoglycan binding domain protein [Escherichia coli ABU
           83972]
 gi|315291223|gb|EFU50583.1| conserved hypothetical protein [Escherichia coli MS 153-1]
 gi|331055244|gb|EGI27253.1| putative amidase [Escherichia coli TA206]
          Length = 615

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPVVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNNREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|256422945|ref|YP_003123598.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256037853|gb|ACU61397.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 534

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 171/349 (48%), Gaps = 20/349 (5%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           ++ A   K++  Y DI  +  W  + I   +    G+S+  +  +++RL  +G+    K 
Sbjct: 196 QSYAALHKSLQRYVDIAEKNSWDTIRIEKKKRYKKGDSTAVIAWVKKRLQATGEY-SDKD 254

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            S  F+  +E+AV  F+  HG  P G++  + L  MN+P    ++++ +NL R+      
Sbjct: 255 TSTVFNDALETAVTAFEATHGHTPKGVITDTLLREMNMPAIKLVQRILINLERMHWAPAN 314

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
             G R +LVNIP   L      K      V+VG+  + T +   ++++I+F+PYW +P S
Sbjct: 315 PEG-RLILVNIPEFGLHVWNGSKKEFDMPVVVGKEGKSTTMFSGKLDQIVFSPYWNLPNS 373

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I++++++  L ++  Y+   N+ +  E+             P     I RQ PGK N + 
Sbjct: 374 IVKEEILPALARNKNYISSKNMEITGERN----------GLP-----IVRQKPGKDNPLG 418

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +  N Y HDT +  LF+   R  + GC+R+ + + +  +LL D   WS   I+
Sbjct: 419 QVKFLFPNSFNIYFHDTNQKYLFDRDQRAFSHGCIRLGDPVKMANYLLADNQNWSAERID 478

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
             + + K   V++   VPV   Y +AW  +   +QFR+DIY  D    G
Sbjct: 479 SAMNSGKEKYVRVKDPVPVLITYYTAWVDEAGKLQFREDIYDHDTYMAG 527


>gi|222032656|emb|CAP75395.1| Uncharacterized protein ycbB [Escherichia coli LF82]
 gi|312945445|gb|ADR26272.1| hypothetical protein NRG857_04220 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 615

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPVVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|306812622|ref|ZP_07446815.1| hypothetical protein ECNC101_11937 [Escherichia coli NC101]
 gi|305853385|gb|EFM53824.1| hypothetical protein ECNC101_11937 [Escherichia coli NC101]
          Length = 615

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPVVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNNREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|117920121|ref|YP_869313.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117612453|gb|ABK47907.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. ANA-3]
          Length = 560

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 193/365 (52%), Gaps = 20/365 (5%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELP----IRPLHLGNSSVSVQRLRERLIISGDL---- 124
           E   Q ++ +A Y+D+ +R  +  +P    I+P   G++S SVQ +  RL   G L    
Sbjct: 186 EPYHQLKQYLAQYKDLAARYPFSPIPYTEVIKP---GSTSPSVQGIATRLTELGYLAASA 242

Query: 125 --DPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
             D S  ++  + +D+ +E+AV+ FQ  H L   G++ + T+ A+NVP    + Q+++NL
Sbjct: 243 PADNSAAVNQPLTYDSTLEAAVRQFQTDHSLKADGVIGAGTMAALNVPYSQLVDQIRINL 302

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            R  + L   +   Y++VN+    L   ++  +  R+ +I+G+++ +TP+  S++  ++ 
Sbjct: 303 ER-ARWLSANLPTNYLIVNLAGYELLLFKDNSLSWRTDIIIGKINAKTPLFKSKLKYVVV 361

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF--IF 298
           NP W +PRSI   +++  LR++P YL+  +  +++  G  V    +DW+S    NF   F
Sbjct: 362 NPTWTVPRSI-STEIINHLRKEPDYLQKKHFKVVEGSGTPVDASGIDWHSMTRKNFPYWF 420

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            QDPG+ N++   K  F ++ + Y+HDTP   LF    R  + GC+RV++ + L   LL 
Sbjct: 421 VQDPGEDNSLGLVKFIFPNQYSIYLHDTPAKSLFEQTDRAFSHGCIRVKDPLVLADKLLS 480

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
               WS   +   +   KT  + L   + +  +Y +  + KD  I+F +D+Y  D V + 
Sbjct: 481 ANANWSSSTLSSKLSEGKTENLFLDEPLDILIMYWTV-TLKDGKIKFYNDVYKRDPVLIE 539

Query: 419 IIPLP 423
            +  P
Sbjct: 540 ALNRP 544


>gi|157375514|ref|YP_001474114.1| hypothetical protein Ssed_2377 [Shewanella sediminis HAW-EB3]
 gi|157317888|gb|ABV36986.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 483

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 169/329 (51%), Gaps = 13/329 (3%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS---KGLSVAFDAYVESAVKLFQMRHG 150
           WP +      LG SS  V++LR  L   GDL+ S   +     +D  V   +K FQ+RHG
Sbjct: 156 WPTMSQYEFRLGQSSNEVKQLRWMLTQLGDLEHSELTRYREAIYDPMVIDGIKSFQLRHG 215

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L+ +G +D  T+EA+NV    R+ Q+Q NL R   L       + V +NIP   L   E 
Sbjct: 216 LNVNGNLDKYTVEAINVTPLQRVEQMQRNLWRWITL-STPNAEKLVWINIPGYQLSIFEQ 274

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL--KD 268
           G V L+  VI+G+    TPIL + + ++  NP W  P SII+ +++ L   +P YL  K 
Sbjct: 275 GSVTLQMKVIIGKPSSPTPILSTYLTKLTINPSWRPPASIIKSELLPLNAAEPGYLNHKQ 334

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR----QDPGKINAMASTKIEFYSRNNTYMH 324
             +H +    K V ++  D +S + P  + +    Q PG+ NA+   +    +R++ Y+H
Sbjct: 335 FELHGVGLNKKHV-IKLGDVDSKQLPTLLRQYRLVQAPGEDNALGKMRFTIVNRHSIYLH 393

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LF   VR  + GC+R+   I L  +L+ +T   +R  +++ V    T    L++
Sbjct: 394 DTPAKQLFKRNVRALSHGCIRLEKPIALSSYLV-ETDERAR-ELQKAVGGSGTRHFSLSS 451

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            +PV+  Y ++W      +Q R DIY LD
Sbjct: 452 PIPVYITYHTSWVDAAGKLQVRPDIYNLD 480


>gi|197266013|ref|ZP_03166087.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA23]
 gi|197244268|gb|EDY26888.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA23]
          Length = 614

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 155/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ 
Sbjct: 308 PAPAVRAAYDNELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRL 367

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 368 LPAELSTG---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPW 424

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q
Sbjct: 425 NVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQ 484

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D 
Sbjct: 485 APGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA 544

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 545 -GWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 596


>gi|260597325|ref|YP_003209896.1| murein L,D-transpeptidase [Cronobacter turicensis z3032]
 gi|260216502|emb|CBA29674.1| Uncharacterized protein ycbB [Cronobacter turicensis z3032]
          Length = 521

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 155/287 (54%), Gaps = 8/287 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  + +AVK FQ   GL   G++  ST + +NV    R   L +N+ R++ LL  K+  
Sbjct: 222 YDKDLVAAVKRFQKWQGLGADGVIGQSTRDWLNVTPAQRAALLALNIQRLR-LLPGKLST 280

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIP  SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +K
Sbjct: 281 G-IMVNIPEYSLVYYQNGSPVLASRVIVGRPDRKTPLMSSALNNVVVNPPWNVPPTLARK 339

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPN--FIFRQDPGKINAM 308
           D++  +  DP YL+ +   +++  G    V +   VDW +  P N  F F+Q PG  N++
Sbjct: 340 DILPKVWNDPGYLESHGYTVLNGWGSNADVVDPWMVDWATITPSNLPFRFQQAPGAHNSL 399

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I
Sbjct: 400 GRYKFNMPSSDAIYLHDTPNHNLFQRDSRALSSGCVRVNKASELANMLLQDA-GWNDSRI 458

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            + +K   T  V +   +PV+  Y++A+  +D   Q+R DIY  D+ 
Sbjct: 459 SQTLKEGNTRYVNIPQTIPVNLYYLTAFIGEDGRPQYRTDIYNYDHT 505


>gi|205360811|ref|ZP_02686636.2| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|205346897|gb|EDZ33528.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
          Length = 640

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 155/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ 
Sbjct: 334 PAPAVRAAYDNELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRL 393

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 394 LPAELSTG---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPW 450

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q
Sbjct: 451 NVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQ 510

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D 
Sbjct: 511 APGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA 570

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 571 -GWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 622


>gi|320540487|ref|ZP_08040137.1| putative murein L,D-transpeptidase [Serratia symbiotica str.
           Tucson]
 gi|320029418|gb|EFW11447.1| putative murein L,D-transpeptidase [Serratia symbiotica str.
           Tucson]
          Length = 541

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 149/281 (53%), Gaps = 8/281 (2%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           + VK FQ   GL+  G++ + T E +NV    R+  L +N+ R++ L         ++VN
Sbjct: 249 AGVKRFQKWQGLNTDGVIGARTREWLNVSPQTRVALLALNIQRLRILPGYISS--GIMVN 306

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP  S+   +NG+  L S VIVGR  R+TP+++S ++ ++ NP W +P S+++ D++   
Sbjct: 307 IPNYSMTYYQNGREVLSSHVIVGRPSRKTPLMNSGLSNVVLNPPWNVPTSLVRADIVPKA 366

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIE 314
            +D  Y + +   ++ +  K+  V +   +DWNS    NF +  RQ PG  N++   K  
Sbjct: 367 MRDGSYFQQHGYTLLSDWSKDAKVIDPAMIDWNSVSARNFPYRVRQAPGASNSLGRFKFN 426

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL D   WS   +   ++ 
Sbjct: 427 MPSSDAIYLHDTPNHNLFQKDMRALSSGCVRVNKADDLANMLLHDA-GWSNDRVASTLQE 485

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             TT V +   +PV   Y++AW   D  +QFR DIY  D+ 
Sbjct: 486 GNTTYVNIRQRIPVKLYYLTAWVSDDGQMQFRTDIYNYDHA 526


>gi|308186271|ref|YP_003930402.1| hypothetical protein Pvag_0751 [Pantoea vagans C9-1]
 gi|308056781|gb|ADO08953.1| Uncharacterized protein ycbB [Pantoea vagans C9-1]
          Length = 603

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 149/287 (51%), Gaps = 8/287 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  + + VK FQ   GLD  G + + T + +NV   +R   L +N+ R++ LL   M  
Sbjct: 304 YDETLVAGVKRFQQWQGLDGDGAIGTRTRQWLNVSPQMRASLLALNIQRLR-LLPDDMH- 361

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNI   SL    NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++++K
Sbjct: 362 NGIMVNIANYSLIYYNNGNKILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVRK 421

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIFR--QDPGKINAM 308
           D++  ++QDP YL  +   ++     +  V     +DW      +F +R  Q PG  NA+
Sbjct: 422 DIIPKVKQDPTYLYKHGYTLLSGWSADAEVIDPSMIDWRMVSAASFPYRMIQAPGVANAL 481

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I
Sbjct: 482 GRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGLLLQDA-GWNDSRI 540

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              +K   T  V +   +PV+  Y++AW   D   QFR DIY  D+ 
Sbjct: 541 SSTLKEGDTRYVPIRHRIPVNLYYLTAWVADDGKPQFRTDIYNYDDT 587


>gi|168466590|ref|ZP_02700452.1| YcbB [Salmonella enterica subsp. enterica serovar Newport str.
           SL317]
 gi|195631019|gb|EDX49605.1| YcbB [Salmonella enterica subsp. enterica serovar Newport str.
           SL317]
          Length = 614

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 155/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ 
Sbjct: 308 PAPSVRAAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRL 367

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 368 LPAELSTG---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPW 424

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q
Sbjct: 425 NVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQ 484

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D 
Sbjct: 485 APGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA 544

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 545 -GWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 596


>gi|332092543|gb|EGI97616.1| putative peptidoglycan binding domain protein [Shigella boydii
           5216-82]
          Length = 611

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 153/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +   VK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 305 PAPAVRAAYDNELVEVVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 364

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 365 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 421

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 422 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 481

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 482 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 541

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 542 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYTYD 593


>gi|163752572|ref|ZP_02159755.1| hypothetical protein KT99_11874 [Shewanella benthica KT99]
 gi|161327545|gb|EDP98746.1| hypothetical protein KT99_11874 [Shewanella benthica KT99]
          Length = 371

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 159/289 (55%), Gaps = 5/289 (1%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSK 128
           ISK+ +A T   I +   +  +  W EL     L  G++   V  +  RL   GDL    
Sbjct: 85  ISKDYLA-TSNNIRYLLWLDQKMDWNELVSNSWLKQGDNHSLVPEISRRLNGLGDLGEYD 143

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
            +S  FDA V++AV+ FQ RHGL   G++   T+  +N+    R   L +N +   + L 
Sbjct: 144 SVSTLFDANVKNAVRHFQQRHGLKIDGIIGPETIRWINITPVKRAELLAINFINKTRYLA 203

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
               + ++++NIPA  LE ++NG+V L+S VIVG+  RQTP+L SRI+ ++ NP W +PR
Sbjct: 204 SIEPI-FLIINIPAFELELIDNGQVALQSRVIVGKPYRQTPLLISRISNLVINPSWRVPR 262

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKIN 306
           S++ +D++  +R+D  Y++  N ++ D +G+ V     +W       F +R  Q PG+ N
Sbjct: 263 SLLIRDLLPKVREDGGYIQAGNFNVFDNQGQMVSKTAQEWQDLAHGRFPYRLVQQPGEGN 322

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            +   K  F ++ + Y+HDT +  LF+   R  +SGC+R+ N+  L  W
Sbjct: 323 TLGRYKFYFENKYSVYLHDTADKELFDESNRALSSGCIRIENVEGLANW 371


>gi|295096375|emb|CBK85465.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 607

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 155/286 (54%), Gaps = 7/286 (2%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
            A+D  + +AVK FQ   GL   G++  ST + +NV    R   L +N+ R++ LL   +
Sbjct: 307 AAYDRELVAAVKQFQAAQGLGADGVIGPSTRDWLNVSPAQRAGVLALNIQRLR-LLPGTL 365

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 366 STG-IMVNIPAYSLVYYQDGSEVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 424

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +N  ++     +  ++   VDW++  P N  F F+Q PG  N+
Sbjct: 425 RKDILPKVWNDPGYLERHNYTVMRGWNSKEAIDPWMVDWSTITPSNLPFRFQQAPGAHNS 484

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 485 LGRYKFNMPSSDAIYLHDTPNHNLFQKDARALSSGCVRVNKASELANMLLQDA-GWNDTR 543

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 544 ISDALKQGDTRYVNIRHNIPVNLYYLTAFVGADGRTQYRTDIYNYD 589


>gi|110641122|ref|YP_668852.1| hypothetical protein ECP_0936 [Escherichia coli 536]
 gi|191172097|ref|ZP_03033641.1| putative peptidoglycan binding domain [Escherichia coli F11]
 gi|300983088|ref|ZP_07176432.1| hypothetical protein HMPREF9553_02391 [Escherichia coli MS 200-1]
 gi|110342714|gb|ABG68951.1| hypothetical protein YcbB [Escherichia coli 536]
 gi|190907624|gb|EDV67219.1| putative peptidoglycan binding domain [Escherichia coli F11]
 gi|300306992|gb|EFJ61512.1| hypothetical protein HMPREF9553_02391 [Escherichia coli MS 200-1]
 gi|324009854|gb|EGB79073.1| hypothetical protein HMPREF9532_00405 [Escherichia coli MS 57-2]
 gi|324012952|gb|EGB82171.1| hypothetical protein HMPREF9533_03020 [Escherichia coli MS 60-1]
          Length = 615

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 151/287 (52%), Gaps = 9/287 (3%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQK 190
            A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  E  
Sbjct: 315 AAYDNELVEAVKRFQTWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELS 374

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
            G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 375 TG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKIN 306
            +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q PG  N
Sbjct: 432 ARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDK 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 551 RISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|161503876|ref|YP_001570988.1| hypothetical protein SARI_01965 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865223|gb|ABX21846.1| hypothetical protein SARI_01965 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 644

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 155/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ 
Sbjct: 338 PAPAVRAAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRL 397

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 398 LPAELSTG---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPW 454

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q
Sbjct: 455 NVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQ 514

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D 
Sbjct: 515 APGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKAPELANMLLQDA 574

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 575 -GWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 626


>gi|323174974|gb|EFZ60589.1| putative peptidoglycan binding domain protein [Escherichia coli
           LT-68]
          Length = 615

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 153/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
             G  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 ASGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|309701201|emb|CBJ00501.1| putative exported protein [Escherichia coli ETEC H10407]
          Length = 615

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 153/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
             G  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 ASGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|295688991|ref|YP_003592684.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter segnis ATCC 21756]
 gi|295430894|gb|ADG10066.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter segnis ATCC 21756]
          Length = 468

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 166/337 (49%), Gaps = 22/337 (6%)

Query: 81  AIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAY 137
            +  Y+ + ++GGW  +P  P L  G     V+ LR RL +    DP+  L+ +  +DA 
Sbjct: 142 GLTTYRGLAAKGGWRVVPAGPSLTEGLVDPRVKALRARLAVE---DPTVALTGSDVYDAA 198

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  AV+  Q R GL+P G+V   TL A+NVPV+ R+ Q++ N+ R +  L Q +    + 
Sbjct: 199 LVQAVQRAQKRFGLNPDGVVGPGTLNALNVPVERRVDQIEANMERWR-WLPQTLPADRIQ 257

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNI AA +   +     L    + GR   +TP+L S I+ I+ NP W +P+SI  K++  
Sbjct: 258 VNIAAAVMSVFQQDTPTLTMRAVTGRPGDETPMLSSMIHSIVLNPPWNVPQSIATKELWP 317

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
             + +P YL  N+          + +   D  S        +Q  G   A+   K +F +
Sbjct: 318 KEKANPGYLARNDF---------IVIPTGDGGS------RLQQKAGPKAALGQVKFDFNN 362

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
               Y+HDTP    F++  R  + GCVR++  I+L   ++   P W+   I+  + +  T
Sbjct: 363 PYGVYLHDTPSRSKFDSFSRLASHGCVRLQKPIELIKLMMAGDPVWTPEKIDATLASGDT 422

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              KL  ++ V  +Y +A+   D  + FRDD YG D 
Sbjct: 423 VRAKLPQQMAVFLLYWTAYVTPDGQVNFRDDPYGWDK 459


>gi|251789271|ref|YP_003003992.1| hypothetical protein Dd1591_1660 [Dickeya zeae Ech1591]
 gi|247537892|gb|ACT06513.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
          Length = 563

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 180/350 (51%), Gaps = 24/350 (6%)

Query: 94  WPELPIR-PLHLGNSSVSVQRLRERLIISGDLD------------PSKGLSVA--FDAYV 138
           WP+L +   L  G+ S ++  L+E L+ +G L              + G + A  +D  +
Sbjct: 209 WPKLVLADSLRPGDESNALPVLQEILLRTGMLSQDSAAMPLFNDATAAGNTAALRYDGEM 268

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
             AVK FQ   GL   G++   T + +NV   +R   L +N+ R++ L+  K+    ++V
Sbjct: 269 VEAVKRFQHSQGLLDDGVIGKRTRDWLNVSSQMRAALLALNIQRLR-LVPDKVS-SGIVV 326

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           NIP  SL   +NG   L S VIVG+  R+TP++ S ++ ++ NP W +P ++ ++D++  
Sbjct: 327 NIPNYSLSYYQNGAEILSSRVIVGQPKRKTPLMSSSLSNVVMNPPWNVPTTLTRQDIIPK 386

Query: 259 LRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKI 313
           + QDP YL+ +   ++    +  + +    +DW      NF +  RQ PG  N++   K 
Sbjct: 387 VIQDPGYLQRHGYTVLSGWTDSAQPIDPSMIDWPMMSAGNFPYRLRQAPGDSNSLGRYKF 446

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              + ++ Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I   ++
Sbjct: 447 NMPNTDSIYLHDTPNHNLFQKDIRALSSGCVRVNKASELAALLLQDA-GWNNARISSTLE 505

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGIIPL 422
              TT V +   VPV+F Y++AW   D   QFR DIY  D+ V  G + L
Sbjct: 506 QGNTTYVAVRQRVPVNFYYLTAWVADDGKPQFRTDIYNYDDTVKTGTLAL 555


>gi|325106518|ref|YP_004276172.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
 gi|324975366|gb|ADY54350.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
          Length = 548

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 160/316 (50%), Gaps = 16/316 (5%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   +G+SS ++ ++R+RL   GD   S  LS  +DA ++ AV  FQ RHGL   G++ +
Sbjct: 242 KSYKIGDSSDNIVKIRKRLHFLGDYKESDTLSALYDANLKEAVSNFQERHGLTNDGVIGA 301

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T++ MNVP+  R++ + VN+ R +  +   +   Y+ VNIP   L       +     V
Sbjct: 302 GTIKEMNVPLRDRVKTIIVNMERFR-WVPAGLNKEYLGVNIPEYKLHVYNADSLLWSCNV 360

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           +VG+   +T +    +  I+F+PYW +P SI++ +++  + ++  YLK +N+        
Sbjct: 361 VVGKELHKTVVFQGDLKYIVFSPYWNVPPSIVRNEILPAMNRNAGYLKQHNM-------- 412

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                E+  +    P  + RQ PGK N++   K  F +  N Y+HDTP   LF+   R  
Sbjct: 413 -----EITGHENGLP--VIRQLPGKDNSLGLVKFLFPNNFNIYLHDTPAKSLFSMEDRAF 465

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           + GC+RV     L  +LLKD   W    I++ +   K   V L   VPV   Y +A+  +
Sbjct: 466 SHGCIRVSEPKKLAEFLLKDDKAWDSISIDKAMHQTKEKWVTLKNPVPVFISYFTAFVDR 525

Query: 400 DSIIQFRDDIYGLDNV 415
              I FR DIY  D+ 
Sbjct: 526 KGQINFRKDIYDRDSA 541


>gi|320196581|gb|EFW71204.1| L,D-transpeptidase YcbB [Escherichia coli WV_060327]
          Length = 611

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A++  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 305 PAPVVRAAYENELVEAVKRFQTWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 364

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 365 LPTELSTG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 421

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 422 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 481

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 482 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 541

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 542 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|329298736|ref|ZP_08256072.1| murein L,D-transpeptidase [Plautia stali symbiont]
          Length = 590

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 168/323 (52%), Gaps = 13/323 (4%)

Query: 101 PLHLGNSSVSVQRLRERL-IISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P+ +  S+ SV  L  ++   SG++    PS   +V +D+ +   VK FQ    L   G 
Sbjct: 255 PVAVSPSATSVSDLPAQVPQASGNISTVTPSASNNV-YDSTLVEGVKRFQHWQELADDGA 313

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           +   T E +NV   +R   L +N+ R++ LL   M    ++VNIP  SL    NG   L 
Sbjct: 314 IGPRTREWLNVSPQMRAALLALNIQRLR-LLPDDMH-NGIMVNIPNYSLTYYNNGNTILS 371

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
           S VIVGR DR+TP++ S +N ++ NP W +P +++++D++  ++QDP YL  +   ++  
Sbjct: 372 SRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVRQDIVPKVKQDPSYLYKHGYTLLSG 431

Query: 277 KGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
              +  V +   +DW+     +F +  RQ PG  N++   K    S +  Y+HDTP   L
Sbjct: 432 WSADAEVIDPSVIDWHMVSAASFPYRIRQAPGASNSLGRYKFNMPSSDAIYLHDTPNHGL 491

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F   +R  +SGCVRV    +L   LL+D   W+   I + +K   T  V +   +PV+  
Sbjct: 492 FQRDIRALSSGCVRVNKASELADLLLQDA-GWNDSRISDTLKQGDTRYVPIRHRIPVNLY 550

Query: 392 YISAWSPKDSIIQFRDDIYGLDN 414
           Y++AW   D   Q+R DIY  DN
Sbjct: 551 YLTAWVADDGQPQYRTDIYNYDN 573


>gi|197334392|ref|YP_002155958.1| cell wall degradation protein [Vibrio fischeri MJ11]
 gi|197315882|gb|ACH65329.1| cell wall degradation protein [Vibrio fischeri MJ11]
          Length = 512

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 175/329 (53%), Gaps = 25/329 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV------AFDAYVESAVKLFQMRHGLD 152
           IRP    N    V  +  RL +SG+++  +   +       +D+ +   +K FQ RHGL 
Sbjct: 188 IRP----NQFTDVNAIIYRLQVSGEINHQEAEMLLRQSNGHYDSSLVLIIKEFQKRHGLK 243

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++   TL  +N+    R+R + +N+ R++ L E K    +VLVNIP+  +   + G+
Sbjct: 244 QDGIIGPKTLHWLNMTAKERVRIMALNIQRLR-LWENKNS-HFVLVNIPSYEMAYWQEGE 301

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           +   S VIVG+ +R+TPI  +R+N I+FNP W +P  I+++D++     +  +L+  N  
Sbjct: 302 LVFTSKVIVGKPERRTPIFTTRLNAIVFNPEWKVPTKIMREDILPKALSNKDFLQSQNFE 361

Query: 273 MIDEK-GKEVF-VEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           +I     KEV  ++++DW       F +  +Q  G  NA+   K    +RN  Y+HDTP 
Sbjct: 362 IIPTWLSKEVISIDDIDWEQVNVETFPYKLKQKSGNTNALGRYKFNTPNRNAIYLHDTPS 421

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKD----TPTWSRYHIEEVVKTRKTTPVKLAT 384
             LF+   R  +SGC+RV    +    L+K+    T  +  YH  E+ +T K T   L  
Sbjct: 422 RSLFSKQHRAYSSGCIRVEKASEFAQLLMKESHFSTQDYKDYH--ELPETSKVT---LDQ 476

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           ++ V+ +Y ++W  +D+ +QFR+DIY  D
Sbjct: 477 KISVYTIYQTSWVGEDNQVQFRNDIYKYD 505


>gi|83858763|ref|ZP_00952285.1| hypothetical protein OA2633_04651 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853586|gb|EAP91438.1| hypothetical protein OA2633_04651 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 595

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 197/410 (48%), Gaps = 43/410 (10%)

Query: 52  FDNFLARVDMGI-DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP---LHLGNS 107
            D  L R   G+ D +   ++        KA   Y   +  GG+ ++P  P   L LG+S
Sbjct: 175 LDQMLPRAGAGVLDYEQLSVTHPEYEDLIKARRTYDGYIKSGGFTQVP-EPEGLLELGDS 233

Query: 108 SVSVQRLRERLIISG--------------------------DLDPSKGLSVA-------- 133
           S  V+ LR RL   G                            D +  +S A        
Sbjct: 234 SPVVETLRVRLREEGYRIERPRRPSLMAESQPPLTQVSFITAPDAAAPVSAADWRREMQS 293

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           F   +E+A++ FQ  +GL+  G++  +T+ A+NV  + ++ ++  NL R ++     +G 
Sbjct: 294 FSPELEAALRDFQAHNGLEVDGVLGPATIAALNVSAEDKLARIDANLERWRRA-SPDLGE 352

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           RYV VNIPA +  AV +G   L    IVG   RQTP++  +I  I+ NP+W +P SI+ +
Sbjct: 353 RYVEVNIPAYTARAVRDGDTELEMRSIVGLPARQTPLMSEQIEHIVANPHWYVPESILVR 412

Query: 254 DMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSPEPPNFI-FRQDPGKINAMAST 311
           D ++ +R+D  YL+D    ++D + G+ +  E +DW++    + +   QDPG  NA+   
Sbjct: 413 DKLSHIREDEAYLEDRGYKVVDRDTGEPLSAETIDWSADGIADQVRLIQDPGDNNALGEL 472

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD-TPTWSRYHIEE 370
           KI F ++++ Y+H TP   LF    R  +SGC+R+ +   +  W+++  T   +   I +
Sbjct: 473 KIMFPNQHSVYLHGTPSRHLFERDQRAFSSGCIRLEDPQAMAAWVVEAVTDQNAEAMIAQ 532

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            V + +   + L   +PVH VY +     D  + F  D+Y  D   + +I
Sbjct: 533 AVASGENQHIALDAPLPVHVVYRTVEVEDDGDVIFHHDVYDRDPALIALI 582


>gi|311747883|ref|ZP_07721668.1| peptidoglycan binding domain-containing protein [Algoriphagus sp.
           PR1]
 gi|126575877|gb|EAZ80187.1| peptidoglycan binding domain-containing protein [Algoriphagus sp.
           PR1]
          Length = 562

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 163/317 (51%), Gaps = 4/317 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           + L +G+ + SV +LRERL   G LD  +    + FD+ +   +K +Q+ +G+ P G + 
Sbjct: 228 QSLKVGDRNQSVPKLRERLQFWGFLDTYETEDELLFDSTMWEGLKKYQIENGMKPDGAIG 287

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             T   +N   +  I    VN+ R++ L E       VLVNI    L+ ++ G   L + 
Sbjct: 288 DLTAGFLNDSPEKLIDIASVNMERMRWLPEINWDEELVLVNIANYQLDYLDKGDTTLSAK 347

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           VIVG+   ++P+  + ++ I+F+PYW IP SI Q +++  L+++  YL++ N+ ++   G
Sbjct: 348 VIVGKEYNESPVFSAPMSYIVFSPYWNIPSSITQDEILPSLKKNKAYLQEKNMEVVSNTG 407

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +   +V+W   +   F F  RQ PG  N++   K  F +  N Y+HDTP   LF    
Sbjct: 408 EVLDPNKVNWKEKDGEEFPFRIRQKPGGSNSLGLVKFMFPNDYNIYIHDTPARSLFQRES 467

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  + GC+R++        LL+D   W+   I E +       VKL  EVPV  +Y++ W
Sbjct: 468 RALSHGCIRIQYPDQFAKSLLRDK-KWTTEKISEAMHQENEEVVKLNREVPVLLLYLTFW 526

Query: 397 SPKDSIIQFRDDIYGLD 413
           +       FR DIY  D
Sbjct: 527 TDDKGQGHFRPDIYNRD 543


>gi|271500170|ref|YP_003333195.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
 gi|270343725|gb|ACZ76490.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
          Length = 567

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 180/361 (49%), Gaps = 23/361 (6%)

Query: 82  IAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD-------------PS 127
           +A    ++ +  WP+L +   L  G+ S  +  LRE L+ +G L              P 
Sbjct: 202 VALKDMLMDKRPWPKLMLADSLRPGDESNGLPVLREILLRTGMLSQNSAAMPLFNEASPG 261

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
               + ++  +  AVK FQ   GL   G++   T + +NV   +R   L +N+ R++ + 
Sbjct: 262 NASPLRYEGELVEAVKRFQHSQGLQDDGVIGKRTRDWLNVSSQMRATLLALNIQRLRLVP 321

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           +       ++VNIP  SL   ++G   L S VIVG+  R+TP++ + ++ ++ NP W +P
Sbjct: 322 DNVNS--GIMVNIPNYSLIYYQHGAEILSSRVIVGQPKRKTPLMSTSLSNVVMNPPWNVP 379

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIF--RQDP 302
            ++ ++D++  + QDP YL+ +   ++    E  + +    +DW      NF +  RQ P
Sbjct: 380 TTLTRQDIIPKVIQDPGYLQRHGYTVLSDWTESAQPIDPSMIDWPMVSASNFPYRLRQAP 439

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    + ++ Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   
Sbjct: 440 GDSNSLGRYKFNIPNTDSIYLHDTPNHALFQKDIRALSSGCVRVNKASELAALLLQDA-G 498

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGIIP 421
           W+   I   ++   TT V +   +PV+F Y++AW   D   QFR DIY  D+ V  G + 
Sbjct: 499 WNNARISSTLEQGNTTYVAVRQRIPVNFYYLTAWVADDGKPQFRTDIYNYDDTVKTGALA 558

Query: 422 L 422
           L
Sbjct: 559 L 559


>gi|114767686|ref|ZP_01446383.1| peptidoglycan binding protein, putative [Pelagibaca bermudensis
           HTCC2601]
 gi|114540304|gb|EAU43401.1| peptidoglycan binding protein, putative [Roseovarius sp. HTCC2601]
          Length = 525

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 17/337 (5%)

Query: 86  QDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + +++RGGW   + +  L  G+S   V  LR+RLI  G L P+  LS  +D  +  AV  
Sbjct: 178 ERVIARGGWGAPVTVGKLDPGDSGPGVVILRDRLIEMGYLKPT--LSARYDDALRDAVLA 235

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYVLVNIPAA 203
           FQ  HGL+  G+  SSTL A+NVP   R++ + V + R + +     +G R+VLVNI   
Sbjct: 236 FQGDHGLEADGVAGSSTLSAVNVPATERLKSVIVAMERERWINFADGLGERHVLVNIVDF 295

Query: 204 SLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
               +++GKV   +  +VG  D  R+TP     +  ++ NP W +PRSI+  + + LLR+
Sbjct: 296 HARIIDDGKVTFETRSVVGHQDPDRRTPEFSDVMEFMVINPSWYVPRSIVVNEYLPLLRR 355

Query: 262 DPQYLKDNNIHMIDEKGKEV-----FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
           +P  +  +++ + D +G+ V     F +    + P    F  RQ PG  NA+   K  F 
Sbjct: 356 NPGAV--SHLVITDSRGRRVNRGNGFAQYSAASFP----FAMRQPPGPKNALGQVKFMFP 409

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           ++ N Y+HDTP   LF    R  + GC+R+ +  D    LL              ++   
Sbjct: 410 NKYNIYLHDTPSKHLFARGQRTFSHGCIRLGDPKDFAYALLALQTDDPEGFFASRLRGGS 469

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            + V L   VPVH +Y +A++     + +R D+YG D
Sbjct: 470 ESRVNLEQPVPVHLIYRTAFTQAKGRVNYRADVYGRD 506


>gi|110804934|ref|YP_688454.1| hypothetical protein SFV_0927 [Shigella flexneri 5 str. 8401]
 gi|110614482|gb|ABF03149.1| putative amidase [Shigella flexneri 5 str. 8401]
          Length = 615

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 152/293 (51%), Gaps = 9/293 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  EVDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWEVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +S CVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSDCVRVNKASDLANMLLQDA 545

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I +  K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 -GWNDKRISDARKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|56413956|ref|YP_151031.1| hypothetical protein SPA1803 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362879|ref|YP_002142516.1| hypothetical protein SSPA1676 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128213|gb|AAV77719.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094356|emb|CAR59868.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 615

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWTTITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|290473860|ref|YP_003466734.1| putative carboxypeptidasewith PGDB-like domain [Xenorhabdus
           bovienii SS-2004]
 gi|289173167|emb|CBJ79940.1| putative carboxypeptidasewith PGDB-like domain [Xenorhabdus
           bovienii SS-2004]
          Length = 572

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 167/337 (49%), Gaps = 13/337 (3%)

Query: 86  QDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDP--SKGLSVAFDAYVESAV 142
           + +  +  W +  ++  L  G +S SV  LRE LI S  LD    K  +  ++  + +AV
Sbjct: 220 KQLADKQQWSDFSMKGTLRPGQNSESVVALREILIRSDTLDSLTVKPENKVYNKELVAAV 279

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIP 201
           K FQ  HGL   G++  ST   +N     R R + +N+ R++ + +    G   +LVNIP
Sbjct: 280 KRFQALHGLSADGVIGQSTKVWLNTTPQTRARIMALNIQRLRIIPDNIPTG---ILVNIP 336

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
             SL    +GK  L S V+VGR  R+TPI+ S +N ++ NP W +P S+ +KD+     +
Sbjct: 337 NYSLFYYLDGKEVLNSKVVVGRPSRKTPIMSSNLNNVVINPPWTVPTSMTRKDIAPRAMR 396

Query: 262 DPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFY 316
           DP Y +     +      +  V     ++W+   P NF +  RQ PG  N++   K    
Sbjct: 397 DPSYFRSRGYTVFSSWSNDAKVIDPSSINWDVTTPNNFPYRIRQAPGPTNSLGRFKFNMP 456

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP    F   +R  +SGCVRV    +L   LL +   W++  +   +KT  
Sbjct: 457 NSEAIYLHDTPNQASFGREMRAVSSGCVRVNKAPELANMLLGNA-GWNKDRVSNSLKTWT 515

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           T  V +  ++PV   Y +AW  +  + Q+R DIY  D
Sbjct: 516 TAYVNIPKKIPVFLYYQTAWVDEGGVPQYRADIYDYD 552


>gi|197248211|ref|YP_002145913.1| hypothetical protein SeAg_B1001 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197211914|gb|ACH49311.1| YcbB [Salmonella enterica subsp. enterica serovar Agona str. SL483]
          Length = 615

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWTTITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|218688768|ref|YP_002396980.1| hypothetical protein ECED1_0955 [Escherichia coli ED1a]
 gi|218426332|emb|CAR07157.1| putative exported enzyme [Escherichia coli ED1a]
          Length = 615

 Score =  159 bits (401), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 151/287 (52%), Gaps = 9/287 (3%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQK 190
            A++  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  E  
Sbjct: 315 AAYENELVEAVKRFQTWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELS 374

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
            G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 375 TG---IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKIN 306
            +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q PG  N
Sbjct: 432 ARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDK 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 551 RISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|292487843|ref|YP_003530718.1| hypothetical protein EAMY_1360 [Erwinia amylovora CFBP1430]
 gi|292899070|ref|YP_003538439.1| peptidoglycan binding protein [Erwinia amylovora ATCC 49946]
 gi|291198918|emb|CBJ46028.1| putative peptidoglycan binding protein [Erwinia amylovora ATCC
           49946]
 gi|291553265|emb|CBA20310.1| Uncharacterized protein ycbB [Erwinia amylovora CFBP1430]
          Length = 615

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 147/278 (52%), Gaps = 8/278 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           A+K FQ   GL+  G +   T + +NV    R   L +N+ R++ LL   M    ++VNI
Sbjct: 323 ALKRFQRWQGLEADGAIGLRTRQWLNVSPPQRATLLALNIQRLR-LLPDDMH-NGIMVNI 380

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W +P ++++KD++  ++
Sbjct: 381 PNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVRKDIVPKVK 440

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
           QDP YL  +   ++     E  V +   ++W+     +F +  RQ PG  N++   K   
Sbjct: 441 QDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSMVSAASFPYRIRQAPGPTNSLGRYKFNM 500

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL D   W    I   +K  
Sbjct: 501 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLLHDV-GWDDARISGTLKEG 559

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            T  V +   +PV+  Y++AW  +D + QFR DIY  D
Sbjct: 560 NTRFVPIRHRIPVNLYYLTAWVAEDGLPQFRTDIYNYD 597


>gi|126729661|ref|ZP_01745474.1| peptidoglycan binding protein, putative [Sagittula stellata E-37]
 gi|126709780|gb|EBA08833.1| peptidoglycan binding protein, putative [Sagittula stellata E-37]
          Length = 540

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 172/333 (51%), Gaps = 17/333 (5%)

Query: 92  GGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GGW P +    L  G S  +V  LR RL+    L PS  L+  +D  + +AV+  Q  HG
Sbjct: 198 GGWGPVVQASSLEPGESGQAVVALRNRLVAMNYLKPS--LTTRYDEDMTAAVRAVQEDHG 255

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE-QKMGLRYVLVNIPAASLEAVE 209
           L+  G+  +STL A+N   + R++ + V + R + L   +  G R+VLVN+     + ++
Sbjct: 256 LNVDGVAGASTLRAINAAPEERLKSIMVAMERERWLNSPEGRGKRHVLVNLVDFHAQIID 315

Query: 210 NGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           + KV   +  ++G+     +TP     +  ++ NPYW +PRSII  + + LLR +P    
Sbjct: 316 DDKVTFETRSVIGQNQSTHRTPEFSDTMEHMVINPYWYVPRSIIVNEYLPLLRSNPG--A 373

Query: 268 DNNIHMIDEKGKEV-----FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
             ++ +ID +G+ V     F +    + P    +  RQ PG  NA+ + K  F ++ N Y
Sbjct: 374 AGHLEIIDGRGRVVSRGQSFAQYSGRSFP----YSMRQRPGPRNALGTVKFMFPNKYNIY 429

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDTP   LF+  VR  + GCVR+ +  D    LL           + ++++ + T V L
Sbjct: 430 LHDTPSQSLFSREVRTFSHGCVRLNDPHDFAYALLSRQERDPVNFFQSILRSGQNTKVPL 489

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           A  +PVH +Y +A++     + +R+D+YG D +
Sbjct: 490 AEPIPVHLIYRTAFTQAKGNVNYRNDVYGRDEI 522


>gi|312171965|emb|CBX80222.1| Uncharacterized protein ycbB [Erwinia amylovora ATCC BAA-2158]
          Length = 615

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 147/278 (52%), Gaps = 8/278 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           A+K FQ   GL+  G +   T + +NV    R   L +N+ R++ LL   M    ++VNI
Sbjct: 323 ALKRFQRWQGLEADGAIGLRTRQWLNVSPPQRATLLALNIQRLR-LLPDDMH-NGIMVNI 380

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W +P ++++KD++  ++
Sbjct: 381 PNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVRKDIVPKVK 440

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
           QDP YL  +   ++     E  V +   ++W+     +F +  RQ PG  N++   K   
Sbjct: 441 QDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSMVSAASFPYRIRQAPGPTNSLGRYKFNM 500

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL D   W    I   +K  
Sbjct: 501 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLLHDV-GWDDARISGTLKEG 559

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            T  V +   +PV+  Y++AW  +D + QFR DIY  D
Sbjct: 560 NTRFVPIRHRIPVNLYYLTAWVAEDGLPQFRTDIYNYD 597


>gi|121592583|ref|YP_984479.1| peptidoglycan-binding domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604663|gb|ABM40403.1| Peptidoglycan-binding domain 1 protein [Acidovorax sp. JS42]
          Length = 533

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 167/351 (47%), Gaps = 22/351 (6%)

Query: 82  IAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDP-------SKGL 130
           +A Y+ + +   W    P LP R L  G     +  L ERL+  GDL P       +   
Sbjct: 158 LAQYRAMGAHPAWAQPLPALPGRKLTPGQPWEGLGVLAERLVALGDLPPQPTGEPPAASA 217

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ--LQVNLMRIKKLLE 188
              +   +  AV  FQ RHGL+  G++ ++TL A+NVP   R  Q  LQ+  +R   +L+
Sbjct: 218 PAQYAPALVEAVTAFQRRHGLEADGVLGATTLAALNVPPAARAEQIALQMERLRWTPVLQ 277

Query: 189 QKMGLRYVLVNIPAASLEAVE--NGKVGLRST--VIVGR-VDRQTPILHSRINRIMFNPY 243
              G R + VN+P   L A E   G++ LR +  VIVG+ +D +TP+    +  I F+PY
Sbjct: 278 ---GPRMIAVNVPEYRLRAYEYAGGRITLRLSMAVIVGKALDTRTPLFDEDMQSIEFSPY 334

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W IP SI + +++  LR+DP YL    +  +   G           +        RQ PG
Sbjct: 335 WNIPPSIARGEIVPRLRRDPGYLARQGMEFVSAAGVSTDATPEMLGAVLAGQARIRQRPG 394

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            +NA+   K    + +N Y+H T  P LF    R  + GCVRV   + L  ++L+D PTW
Sbjct: 395 PLNALGDIKFVLPNNDNIYLHHTSAPTLFGRSRRDLSHGCVRVEEPVALAQFVLQDDPTW 454

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +   I   +   K   V+L   VPV   +I+    +D    F  D+YG D 
Sbjct: 455 TVERIRAAMAQPKPVFVRLPHPVPVIITHITVVV-QDGRPHFYGDLYGHDR 504


>gi|226946156|ref|YP_002801229.1| petidoglycan binding protein [Azotobacter vinelandii DJ]
 gi|226721083|gb|ACO80254.1| petidoglycan binding protein [Azotobacter vinelandii DJ]
          Length = 530

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 145/280 (51%), Gaps = 3/280 (1%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           A+K FQ +H LD  G+V  +TL  +NV    R+ Q++VNL R +  L ++M    +LV++
Sbjct: 250 AMKRFQAKHFLDDDGVVGPATLTELNVTPAERLAQVRVNLERFR-WLAREMEPTLLLVDV 308

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
             A L    + +   ++   VGR  R TP+L S++  +  NP W +P +I+++D +  +R
Sbjct: 309 AGAQLTFFHDHQPRWQTRTQVGRPTRPTPLLKSQVTHLTLNPTWTVPPTILREDKLPRIR 368

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           ++  +L   N+ +ID +GKE+    VDW++P     + RQDPG  N +    I F +   
Sbjct: 369 RNIGFLASQNLRVIDRQGKELNPRNVDWHNPS--GIMLRQDPGPHNPLGRIAIRFPNPFA 426

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF    R  +SGCVRV   + L   LL+      R   EE++ + KT  +
Sbjct: 427 VYLHDTPSQHLFAKETRTLSSGCVRVERAMQLTDLLLEGASPAERQRFEEILASGKTRNL 486

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            L   VP+   Y +        + FR DIY  D   V  +
Sbjct: 487 NLPRPVPILLAYWTVQVDDGGQLVFRPDIYAHDGKLVAAL 526


>gi|167553003|ref|ZP_02346753.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA29]
 gi|194442554|ref|YP_002040193.1| hypothetical protein SNSL254_A1028 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194401217|gb|ACF61439.1| YcbB [Salmonella enterica subsp. enterica serovar Newport str.
           SL254]
 gi|205322472|gb|EDZ10311.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA29]
          Length = 615

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|283833784|ref|ZP_06353525.1| putative periplasmic protein [Citrobacter youngae ATCC 29220]
 gi|291070449|gb|EFE08558.1| putative periplasmic protein [Citrobacter youngae ATCC 29220]
          Length = 583

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 169/330 (51%), Gaps = 13/330 (3%)

Query: 94  WPEL-PIRPLHLGNSSVSVQRLRERLIISGDLD-----PSKGLSVAFDAYVESAVKLFQM 147
           WP+L     L  G  S  +  LRE L  +G L+      +K    A+ + +  AVK FQ 
Sbjct: 239 WPQLTSTSTLRPGEWSNDIPALREILRRTGMLESVVSTAAKEGRSAYGSELVEAVKRFQT 298

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
             GL   G +  +T + +NV    R   L +N+ R++ LL   +    ++VNIPA SL  
Sbjct: 299 WQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLR-LLPGDLSTG-IMVNIPAYSLVY 356

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
            +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+
Sbjct: 357 YQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLE 416

Query: 268 DNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYM 323
            +   ++     +  ++  +VDW +    N  F F+Q PG  N++   K    S +  Y+
Sbjct: 417 RHGYTVMRGWNSKETIDPWQVDWATITASNLPFRFQQAPGARNSLGRYKFNMPSSDAIYL 476

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I + +K   T  V + 
Sbjct: 477 HDTPNHNLFQKDTRALSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIR 535

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 536 QNIPVNLYYLTAFVGADGRTQYRTDIYNYD 565


>gi|168243764|ref|ZP_02668696.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|194449643|ref|YP_002044987.1| hypothetical protein SeHA_C1093 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194407947|gb|ACF68166.1| YcbB [Salmonella enterica subsp. enterica serovar Heidelberg str.
           SL476]
 gi|205337184|gb|EDZ23948.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
          Length = 606

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 307 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 366

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 367 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 423

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 424 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 483

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 484 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 542

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 543 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 588


>gi|200389383|ref|ZP_03215994.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|199601828|gb|EDZ00374.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
          Length = 615

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|16764355|ref|NP_459970.1| hypothetical protein STM0995 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167994946|ref|ZP_02576036.1| YcbB [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|16419508|gb|AAL19929.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205327278|gb|EDZ14042.1| YcbB [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|267992734|gb|ACY87619.1| hypothetical protein STM14_1125 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157538|emb|CBW17028.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911981|dbj|BAJ35955.1| hypothetical protein STMDT12_C10120 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223319|gb|EFX48388.1| L,D-transpeptidase YcbB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323129260|gb|ADX16690.1| putative L,D-transpeptidase YcbB [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332987886|gb|AEF06869.1| hypothetical protein STMUK_0961 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 613

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 314 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 373

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 374 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 430

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 431 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 490

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 491 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 549

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 550 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 595


>gi|94967237|ref|YP_589285.1| peptidoglycan binding domain-containing protein [Candidatus
           Koribacter versatilis Ellin345]
 gi|94549287|gb|ABF39211.1| Peptidoglycan-binding domain 1 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 625

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 165/329 (50%), Gaps = 17/329 (5%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY---VESAVKLFQMRHGLDP 153
           +P + L  G     + RL   L + GDL P+  +  A D Y   +  AVK +Q RHGL  
Sbjct: 287 VPTKALDPGKPYAGIPRLTSLLHLLGDL-PADAVVPAGDVYQAPLVDAVKRYQSRHGLTA 345

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGK 212
            G + + T++ +N P+  R+ QL++ L R +  L Q+     V+VNIP   L A + N K
Sbjct: 346 DGRLGAQTVKELNTPLSTRVEQLRLTLERWR-WLPQEFPQPPVVVNIPEFRLRAYDANHK 404

Query: 213 VGLRSTVIVGRVDR-QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           V L   V+VG+  R +TP+    +  ++F PYW +P SI + +++  +++D  Y+   N 
Sbjct: 405 VVLSMNVVVGKALRHETPVFDDEMKYVVFRPYWNVPPSIQRSEIVPAIQRDRDYISKKNY 464

Query: 272 HMIDEKGKEVFVEEVD---WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
            +  + G+ V    +               RQ PG  NA+   K+ F ++ N Y+H TP 
Sbjct: 465 EVTTQAGQVVTSGTISDEVLQQLRAGKLAVRQKPGPTNALGLVKLIFPNQYNVYLHSTPS 524

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP----VKLAT 384
             LF+   R  + GC+RV    +L  W L+D P W+   +E V    +  P    V L+ 
Sbjct: 525 QQLFSQARRDFSHGCIRVEKPAELSAWALQDKPEWT---VERVRAAMQKGPDNVQVNLSK 581

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            VPV  +Y +A + +D  + F DD+YG D
Sbjct: 582 PVPVLILYGTAVAEEDGSVHFFDDLYGYD 610


>gi|161614766|ref|YP_001588731.1| hypothetical protein SPAB_02518 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161364130|gb|ABX67898.1| hypothetical protein SPAB_02518 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 615

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|238913232|ref|ZP_04657069.1| hypothetical protein SentesTe_19204 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
          Length = 615

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|204929796|ref|ZP_03220817.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|204320790|gb|EDZ05991.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|322616425|gb|EFY13334.1| hypothetical protein SEEM315_12488 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619675|gb|EFY16550.1| hypothetical protein SEEM971_17482 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622629|gb|EFY19474.1| hypothetical protein SEEM973_13475 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629778|gb|EFY26553.1| hypothetical protein SEEM974_05176 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632500|gb|EFY29246.1| hypothetical protein SEEM201_14855 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637005|gb|EFY33708.1| hypothetical protein SEEM202_02080 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641456|gb|EFY38094.1| hypothetical protein SEEM954_01508 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322646078|gb|EFY42594.1| hypothetical protein SEEM054_01025 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649619|gb|EFY46050.1| hypothetical protein SEEM675_16024 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654079|gb|EFY50402.1| hypothetical protein SEEM965_12727 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658611|gb|EFY54873.1| hypothetical protein SEEM19N_16592 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663468|gb|EFY59670.1| hypothetical protein SEEM801_11882 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670204|gb|EFY66344.1| hypothetical protein SEEM507_18659 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671440|gb|EFY67562.1| hypothetical protein SEEM877_09668 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676796|gb|EFY72863.1| hypothetical protein SEEM867_07816 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682720|gb|EFY78739.1| hypothetical protein SEEM180_06862 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686400|gb|EFY82382.1| hypothetical protein SEEM600_05845 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195923|gb|EFZ81090.1| hypothetical protein SEEM581_13131 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199789|gb|EFZ84878.1| hypothetical protein SEEM501_09363 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202782|gb|EFZ87818.1| hypothetical protein SEEM460_08299 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209053|gb|EFZ93990.1| hypothetical protein SEEM020_20065 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209978|gb|EFZ94885.1| hypothetical protein SEEM6152_04835 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217987|gb|EGA02702.1| hypothetical protein SEEM0077_06119 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219019|gb|EGA03526.1| hypothetical protein SEEM0047_21870 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226592|gb|EGA10797.1| hypothetical protein SEEM0055_10100 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229788|gb|EGA13911.1| hypothetical protein SEEM0052_13157 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233013|gb|EGA17109.1| hypothetical protein SEEM3312_03109 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240748|gb|EGA24790.1| hypothetical protein SEEM5258_12719 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243064|gb|EGA27085.1| hypothetical protein SEEM1156_20569 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323249773|gb|EGA33675.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252754|gb|EGA36592.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323259168|gb|EGA42812.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259991|gb|EGA43619.1| hypothetical protein SEEM8284_18068 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323268008|gb|EGA51487.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269856|gb|EGA53305.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 615

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|206576426|ref|YP_002239427.1| putative peptidoglycan binding protein [Klebsiella pneumoniae 342]
 gi|288936277|ref|YP_003440336.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
 gi|206565484|gb|ACI07260.1| putative peptidoglycan binding protein [Klebsiella pneumoniae 342]
 gi|288890986|gb|ADC59304.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
          Length = 596

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 174/347 (50%), Gaps = 33/347 (9%)

Query: 94  WPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA-------- 141
           WP++     +RP   G  S  +  LRE L  +G LD +  + +  D    SA        
Sbjct: 238 WPQMTGSGSLRP---GEWSNDIGALREILQRTGMLDNTANIVLPGDVVSPSAKKKSKPAA 294

Query: 142 -----------VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
                      VK FQ   GL   G++  ST + +NV    R   L +N+ R++ LL  K
Sbjct: 295 RGVYDRQLVEGVKRFQAMQGLGADGVIGQSTRDWLNVSSAQRAGVLALNIQRLR-LLPGK 353

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +    ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 354 LSTG-IMVNIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 412

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKIN 306
            +KD++  +R +P YL+ +   ++     +  ++   VDW++    N  F F+Q PG  N
Sbjct: 413 ARKDILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTITENNLPFRFQQAPGARN 472

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF   VR  +SGCVRV    +L   LL+D   W+  
Sbjct: 473 SLGRYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKASELANMLLQDA-GWNDT 531

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 532 RISDALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDIYNYD 578


>gi|77459598|ref|YP_349105.1| hypothetical protein Pfl01_3376 [Pseudomonas fluorescens Pf0-1]
 gi|77383601|gb|ABA75114.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
          Length = 537

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 155/315 (49%), Gaps = 15/315 (4%)

Query: 111 VQRLRERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           V  L  RL   G L+   G    A+   +  AVK FQ  H L   G+V   T+  +N+  
Sbjct: 229 VPELARRLYSEGYLNSVAGTPDNAYHGVLVEAVKSFQANHSLQADGVVGPGTIAELNISP 288

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             R  QL+VNL R +  + Q M    +LVN+ AA L   + G    ++   VGR +RQTP
Sbjct: 289 LTRREQLRVNLERFR-WMAQDMEPDGLLVNVAAAELTLYQGGLPVWQTRTQVGRAERQTP 347

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +L SR+ R+  NP W +P +I ++D +  +R+D  +L   N+ ++D  G+ +   ++DW+
Sbjct: 348 LLKSRVTRLTLNPTWTVPPTIWKEDKLPEIRKDQTFLSRQNLQVLDANGQPLAAADIDWD 407

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
           +P   N + RQD G  N +    I F +  + Y+HDTP   LF+   R  +SGCVRV + 
Sbjct: 408 NPG--NILLRQDAGPRNPLGQMVIRFPNPFSVYLHDTPSKALFDKGPRAFSSGCVRVEHP 465

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
           + L   LL       +   + ++ T  T   +L+  VP+   Y +A       + +  DI
Sbjct: 466 MKLRDLLLSPA---EKARTDTLLATGVTHEFRLSNPVPILMTYWTAQVDGQGRVLYAPDI 522

Query: 410 Y--------GLDNVH 416
           Y        GLD  H
Sbjct: 523 YSRDSALLAGLDRAH 537


>gi|290510667|ref|ZP_06550037.1| ycbB [Klebsiella sp. 1_1_55]
 gi|289777383|gb|EFD85381.1| ycbB [Klebsiella sp. 1_1_55]
          Length = 596

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 174/347 (50%), Gaps = 33/347 (9%)

Query: 94  WPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA-------- 141
           WP++     +RP   G  S  +  LRE L  +G LD +  + +  D    SA        
Sbjct: 238 WPQMTGSGSLRP---GEWSNDIGALREILQRTGMLDNTANIVLPGDVVSPSAKKKSKPAA 294

Query: 142 -----------VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
                      VK FQ   GL   G++  ST + +NV    R   L +N+ R++ LL  K
Sbjct: 295 RGVYDRQLVEGVKRFQAMQGLGADGVIGQSTRDWLNVSSAQRAGVLALNIQRLR-LLPGK 353

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +    ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 354 LSTG-IMVNIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 412

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKIN 306
            +KD++  +R +P YL+ +   ++     +  ++   VDW++    N  F F+Q PG  N
Sbjct: 413 ARKDILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTITENNLPFRFQQAPGARN 472

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF   VR  +SGCVRV    +L   LL+D   W+  
Sbjct: 473 SLGRYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKASELANMLLQDA-GWNDT 531

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 532 RISDALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDIYNYD 578


>gi|304397085|ref|ZP_07378964.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
 gi|304355234|gb|EFM19602.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
          Length = 603

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 149/287 (51%), Gaps = 8/287 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  + +AVK FQ   GLD  G + + T + +NV   +R   L +N+ R++ LL   M  
Sbjct: 304 YDETLVAAVKRFQQWQGLDGDGAIGARTRQWLNVSPQMRASLLALNIQRLR-LLPDDMH- 361

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNI   SL     G   L S VIVGR DR+TP++ S +N ++ NP W +P ++++K
Sbjct: 362 NGIMVNIANYSLIYYNKGNKILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVRK 421

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIFR--QDPGKINAM 308
           D++  ++ DP YL  +   ++     +  V     +DW      +F +R  Q PG+ NA+
Sbjct: 422 DIIPKVKLDPTYLYKHGYTLLSGWSADAEVIDPSMIDWRMVTASSFPYRLIQAPGEANAL 481

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I
Sbjct: 482 GRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGLLLQDA-GWNDARI 540

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              +K   T  V +   +PV+  Y++AW   D   QFR DIY  D+ 
Sbjct: 541 SSTLKEGDTRYVPIRHRIPVNLYYLTAWVADDGKPQFRTDIYNYDDT 587


>gi|330013904|ref|ZP_08307828.1| peptidoglycan binding domain protein [Klebsiella sp. MS 92-3]
 gi|328533309|gb|EGF60058.1| peptidoglycan binding domain protein [Klebsiella sp. MS 92-3]
          Length = 389

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 153/284 (53%), Gaps = 7/284 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +   VK FQ   GL   G++  ST + +NV    R   L +N+ R++ LL  K+  
Sbjct: 91  YDRQLVEGVKRFQAMQGLGADGVIGQSTRDWLNVSSAQRAGVLALNIQRLR-LLPGKLST 149

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +K
Sbjct: 150 G-IMVNIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARK 208

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINAMA 309
           D++  +R +P YL+ +   ++     +  ++   VDW++    N  F F+Q PG  N++ 
Sbjct: 209 DILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTITENNLPFRFQQAPGARNSLG 268

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    S +  Y+HDTP   LF   VR  +SGCVRV    +L   LL+D   W+   I 
Sbjct: 269 RYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKASELANMLLQDA-GWNDTRIS 327

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 328 DALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDIYNYD 371


>gi|260427999|ref|ZP_05781978.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
 gi|260422491|gb|EEX15742.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
          Length = 544

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 170/334 (50%), Gaps = 17/334 (5%)

Query: 89  LSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           ++ GGW   +    L  G +   V  LR+RL+    L PS  LS  +D  + +AV  FQ 
Sbjct: 200 IAHGGWGATVRSGKLEPGQTGADVVALRDRLVAMNYLAPS--LSARYDDAIVAAVSRFQE 257

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYVLVNIPAASLE 206
            HGL   G+  SSTL A+NV  + R++ + V + R + L + + +G R++LVN+      
Sbjct: 258 DHGLKVDGVAGSSTLSAINVGPEERLKSVIVAMERERWLNMPEGLGARHILVNLVDFHAR 317

Query: 207 AVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
            +++GKV   +  +VG  D  R+TP    R+  ++ NP W +PRSI+  + +  LR++P 
Sbjct: 318 IIDDGKVSFETRSVVGHQDPDRRTPEFSDRMEFMVINPSWYVPRSIVVNEYLPQLRRNPG 377

Query: 265 YLKDNNIHMIDEKGKEV-----FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
            +  +++ + D  G+ V     F +    + P    +  RQ PG  NA+ + K  F ++ 
Sbjct: 378 AV--SHLEITDSSGRRVNRGRGFAQYSAASFP----YAMRQPPGPRNALGTVKFMFPNKY 431

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
           N Y+HDTP   LFN   R  + GC+R+ +  D    LL           +  ++T   T 
Sbjct: 432 NIYLHDTPSKSLFNQNQRTYSHGCIRLGDPHDFAYALLARQTDDPVGFFQSRLRTGSETR 491

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           V L   VPVH +Y +A++     + +R D+YG D
Sbjct: 492 VNLDEPVPVHLIYRTAFTKAKGQVNYRPDVYGRD 525


>gi|22126641|ref|NP_670064.1| hypothetical protein y2763 [Yersinia pestis KIM 10]
 gi|45441013|ref|NP_992552.1| hypothetical protein YP_1186 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51595771|ref|YP_069962.1| hypothetical protein YPTB1431 [Yersinia pseudotuberculosis IP
           32953]
 gi|108806698|ref|YP_650614.1| hypothetical protein YPA_0701 [Yersinia pestis Antiqua]
 gi|108812731|ref|YP_648498.1| hypothetical protein YPN_2570 [Yersinia pestis Nepal516]
 gi|149366664|ref|ZP_01888698.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|167470672|ref|ZP_02335376.1| hypothetical protein YpesF_22997 [Yersinia pestis FV-1]
 gi|170024879|ref|YP_001721384.1| hypothetical protein YPK_2654 [Yersinia pseudotuberculosis YPIII]
 gi|186894850|ref|YP_001871962.1| hypothetical protein YPTS_1533 [Yersinia pseudotuberculosis PB1/+]
 gi|218928555|ref|YP_002346430.1| hypothetical protein YPO1407 [Yersinia pestis CO92]
 gi|229841379|ref|ZP_04461538.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843484|ref|ZP_04463630.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229895858|ref|ZP_04511028.1| predicted carboxypeptidase [Yersinia pestis Pestoides A]
 gi|229903136|ref|ZP_04518249.1| predicted carboxypeptidase [Yersinia pestis Nepal516]
 gi|284988613|ref|YP_001401528.2| hypothetical protein YpsIP31758_2563 [Yersinia pseudotuberculosis
           IP 31758]
 gi|21959653|gb|AAM86315.1|AE013879_5 putative amidase [Yersinia pestis KIM 10]
 gi|45435872|gb|AAS61429.1| putative exported protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589053|emb|CAH20671.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
 gi|108776379|gb|ABG18898.1| hypothetical protein YPN_2570 [Yersinia pestis Nepal516]
 gi|108778611|gb|ABG12669.1| hypothetical protein YPA_0701 [Yersinia pestis Antiqua]
 gi|115347166|emb|CAL20059.1| putative exported protein [Yersinia pestis CO92]
 gi|149291038|gb|EDM41113.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|169751413|gb|ACA68931.1| Peptidoglycan-binding domain 1 protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186697876|gb|ACC88505.1| Peptidoglycan-binding domain 1 protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229678906|gb|EEO75009.1| predicted carboxypeptidase [Yersinia pestis Nepal516]
 gi|229689831|gb|EEO81892.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697745|gb|EEO87792.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700781|gb|EEO88810.1| predicted carboxypeptidase [Yersinia pestis Pestoides A]
 gi|320015731|gb|ADV99302.1| putative carboxypeptidase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 618

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 143/280 (51%), Gaps = 8/280 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L         ++VNI
Sbjct: 326 AVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGHVDN--GIMVNI 383

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S++++D++   R
Sbjct: 384 PNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKAR 443

Query: 261 QDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
            D  Y + N   ++     +  V     +DW+   P NF +  RQ PG  N++   K   
Sbjct: 444 NDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGANNSLGRFKFNM 503

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +   VK  
Sbjct: 504 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDARVSSKVKQG 562

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 563 DTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 602


>gi|165924622|ref|ZP_02220454.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938929|ref|ZP_02227482.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009934|ref|ZP_02230832.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|167399976|ref|ZP_02305494.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419803|ref|ZP_02311556.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|270486929|ref|ZP_06204003.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294503394|ref|YP_003567456.1| hypothetical protein YPZ3_1284 [Yersinia pestis Z176003]
 gi|152960577|gb|ABS48038.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           31758]
 gi|165913076|gb|EDR31700.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165923682|gb|EDR40814.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991330|gb|EDR43631.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166962544|gb|EDR58565.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167050684|gb|EDR62092.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|262365029|gb|ACY61586.1| hypothetical protein YPD8_0898 [Yersinia pestis D182038]
 gi|270335433|gb|EFA46210.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294353853|gb|ADE64194.1| hypothetical protein YPZ3_1284 [Yersinia pestis Z176003]
          Length = 569

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 143/280 (51%), Gaps = 8/280 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L         ++VNI
Sbjct: 277 AVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGHVDN--GIMVNI 334

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S++++D++   R
Sbjct: 335 PNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKAR 394

Query: 261 QDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
            D  Y + N   ++     +  V     +DW+   P NF +  RQ PG  N++   K   
Sbjct: 395 NDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGANNSLGRFKFNM 454

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +   VK  
Sbjct: 455 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDARVSSKVKQG 513

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 514 DTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 553


>gi|162419158|ref|YP_001606446.1| hypothetical protein YpAngola_A1973 [Yersinia pestis Angola]
 gi|166211229|ref|ZP_02237264.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167424284|ref|ZP_02316037.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|162351973|gb|ABX85921.1| conserved hypothetical protein [Yersinia pestis Angola]
 gi|166207000|gb|EDR51480.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167057133|gb|EDR66896.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
          Length = 596

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 143/280 (51%), Gaps = 8/280 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L         ++VNI
Sbjct: 304 AVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGHVDN--GIMVNI 361

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S++++D++   R
Sbjct: 362 PNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKAR 421

Query: 261 QDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
            D  Y + N   ++     +  V     +DW+   P NF +  RQ PG  N++   K   
Sbjct: 422 NDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGANNSLGRFKFNM 481

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +   VK  
Sbjct: 482 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDARVSSKVKQG 540

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 541 DTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 580


>gi|218548441|ref|YP_002382232.1| hypothetical protein EFER_1069 [Escherichia fergusonii ATCC 35469]
 gi|218355982|emb|CAQ88598.1| putative exported enzyme [Escherichia fergusonii ATCC 35469]
 gi|324113744|gb|EGC07719.1| ykud domain-containing protein [Escherichia fergusonii B253]
 gi|325496863|gb|EGC94722.1| hypothetical protein ECD227_0960 [Escherichia fergusonii ECD227]
          Length = 615

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 155/292 (53%), Gaps = 9/292 (3%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           +  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L
Sbjct: 310 APAVRAAYDKELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLL 369

Query: 187 -LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
             E   G   ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +N ++ NP W 
Sbjct: 370 PAELSTG---IMVNIPAYSLVYYQDGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWN 426

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQD 301
           +P ++ +KD++  +R DP YL+ +   ++     +  ++  +VDW++    N  F F+Q 
Sbjct: 427 VPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSKEAIDPWQVDWSTITASNLPFRFQQA 486

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D  
Sbjct: 487 PGARNSLGRYKFNMPSTDAIYLHDTPNHNLFKRDTRALSSGCVRVNKASELANMLLQDA- 545

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 GWNDKRISDALKQGDTRYVNIRQTIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|238757635|ref|ZP_04618819.1| Peptidoglycan-binding domain 1 protein [Yersinia aldovae ATCC
           35236]
 gi|238704140|gb|EEP96673.1| Peptidoglycan-binding domain 1 protein [Yersinia aldovae ATCC
           35236]
          Length = 603

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 144/279 (51%), Gaps = 8/279 (2%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L         ++VN
Sbjct: 310 AAVKRFQQWQGLTDDGVIGVRTREWLNVSPQTRATLLALNIQRLRILPGHVDN--GIMVN 367

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P S++++D++   
Sbjct: 368 IPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKA 427

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMASTKIE 314
           R D  Y + +   ++     +  V +   +DW+   P NF +  RQ PG  N++   K  
Sbjct: 428 RYDSGYFQRHGYTVLSGWSNDAQVVDPSMIDWSMISPNNFPYRLRQAPGSSNSLGRFKFN 487

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +   +K 
Sbjct: 488 MPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDARVSSTLKQ 546

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             TT V +   +PV   Y++AW  +D   QFR DIY  D
Sbjct: 547 GDTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYD 585


>gi|293396754|ref|ZP_06641030.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291421018|gb|EFE94271.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 572

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 11/298 (3%)

Query: 126 PSKGLSVAFDAYVES---AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           P    S+A + Y       VK FQ   GL   G++   T E +NV   +R   L +N+ R
Sbjct: 262 PPAAASMADNLYSSELVEGVKRFQKWQGLSTDGIIGVRTREWLNVSPQMRASLLALNIQR 321

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++ +L  ++    ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP
Sbjct: 322 LR-ILPGRVS-NGIMVNIPNYSLVYYQNGNEVLSSRVIVGRPSRKTPMMSSALNNVVVNP 379

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF- 298
            W +P +++++D++    +D  Y + +   ++     +  V     +DWN     NF + 
Sbjct: 380 PWNVPTTLVREDIVPKAMRDANYFRKHGYTVLSGWSNDAEVIDPSMIDWNMVSARNFPYR 439

Query: 299 -RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL
Sbjct: 440 IRQAPGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLL 499

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           +D   W+   +   +K   TT V +   +PV   Y++AW   D   QFR DIY  DN 
Sbjct: 500 QDA-GWNNSRVSSTLKQGNTTYVNVRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDNT 556


>gi|260575117|ref|ZP_05843118.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sp. SW2]
 gi|259022739|gb|EEW26034.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sp. SW2]
          Length = 531

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 169/330 (51%), Gaps = 10/330 (3%)

Query: 89  LSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           ++ GGW   +P   L  G    +V  LR+RLI  G L   +  +  +DA ++ AV+ FQ+
Sbjct: 188 IASGGWGAAVPSGALKPGQDGPAVVALRDRLIRMGYL--HRTATAIYDADMQKAVQAFQL 245

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
            HGL   G+  + T+E +N+  + R + + V + R ++ +    G R++ VN+   + + 
Sbjct: 246 AHGLTADGVAGTGTIEQINIGPEARWQSVVVAMER-ERWMNIDRGHRHIWVNLTDFTAKI 304

Query: 208 VENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
           +++GKV   S  ++G+   DR++P     +  ++ NP W +PRSI  ++ + +++++P  
Sbjct: 305 IDDGKVTFTSRSVIGKNAADRRSPEFSDMMEFMVINPSWSVPRSITTREYLPMMQRNPN- 363

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYM 323
               ++ +ID  G+ V    VD+      NF F  RQ P   NA+   K  F +  N Y+
Sbjct: 364 -AAGHLKLIDRAGRVVSRASVDFTRYTAANFPFAMRQAPSSGNALGLVKFMFPNPYNIYL 422

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF N VR  + GC+R+ +  D    LL       +   E+ +     + + LA
Sbjct: 423 HDTPSKSLFANEVRDFSHGCIRLGSPFDFAYALLARQTDDPKGLFEQHLNGGGESRLDLA 482

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             VPVH VY +A+      + +R D+YG D
Sbjct: 483 APVPVHLVYFTAFPGAKGQMNYRRDVYGRD 512


>gi|163731883|ref|ZP_02139330.1| peptidoglycan binding domain protein, putative [Roseobacter
           litoralis Och 149]
 gi|161395337|gb|EDQ19659.1| peptidoglycan binding domain protein, putative [Roseobacter
           litoralis Och 149]
          Length = 537

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 182/366 (49%), Gaps = 11/366 (3%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQ 112
           NF      G    +P  + E  A  ++ +   + ++++GGW P +  + L  G+S  SV 
Sbjct: 160 NFAKSSPKGFFKALPPQTGEYNALRKQKLVL-EGLIAKGGWGPTVKAKKLEPGDSGASVV 218

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            LR+RL+  G L   +  +  +D+ +  AV  FQ  HGL   G+V   TL  +N  V+ R
Sbjct: 219 ALRDRLVRMGYL--KRTATGTYDSTMTDAVMRFQADHGLAQDGVVGQGTLAEINTSVEKR 276

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPI 230
           ++ + V + R ++ + +  G R++ VN+   + + ++NGKV   +  ++G  D  RQ+P 
Sbjct: 277 LQSVIVAMER-ERWVNKDRGKRHIEVNLTDFTAKIIDNGKVTFTTRSVIGARDAKRQSPE 335

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
               +  ++ NP W +PRSI   + +  L+Q+P  +  N++ + D  G+++    VD+  
Sbjct: 336 FSDVMEFMVINPSWFVPRSIAIGEYLPELQQNPNAV--NHLIITDRSGRQIDRTNVDFTK 393

Query: 291 PEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                F +  RQ P + NA+   K  F ++ N Y+HDTP   LF    R  + GC+R+ +
Sbjct: 394 YTARTFPYAMRQPPSRSNALGLVKFMFPNKYNIYLHDTPAKNLFGRETRAYSHGCIRLAD 453

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
             +    LL           ++ + +   T + L   VPVH +Y +A +     IQ+R D
Sbjct: 454 PFEFAYALLAKQSNDPEGLFKKTLASGTETQLNLKKPVPVHIIYRTALANSKGQIQYRRD 513

Query: 409 IYGLDN 414
           +YG D 
Sbjct: 514 VYGRDG 519


>gi|152969509|ref|YP_001334618.1| hypothetical protein KPN_00952 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150954358|gb|ABR76388.1| putative amidase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 577

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 153/284 (53%), Gaps = 7/284 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +   VK FQ   GL   G++  ST + +NV    R   L +N+ R++ LL  K+  
Sbjct: 279 YDRQLVEGVKRFQAMQGLGADGVIGQSTRDWLNVSSAQRAGVLALNIQRLR-LLPGKLST 337

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +K
Sbjct: 338 G-IMVNIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARK 396

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINAMA 309
           D++  +R +P YL+ +   ++     +  ++   VDW++    N  F F+Q PG  N++ 
Sbjct: 397 DILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTITENNLPFRFQQAPGARNSLG 456

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    S +  Y+HDTP   LF   VR  +SGCVRV    +L   LL+D   W+   I 
Sbjct: 457 RYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKASELANMLLQDA-GWNDTRIS 515

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 516 DALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDIYNYD 559


>gi|238893981|ref|YP_002918715.1| hypothetical protein KP1_1925 [Klebsiella pneumoniae NTUH-K2044]
 gi|238546297|dbj|BAH62648.1| putative amidase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 596

 Score =  157 bits (398), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 153/284 (53%), Gaps = 7/284 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +   VK FQ   GL   G++  ST + +NV    R   L +N+ R++ LL  K+  
Sbjct: 298 YDRQLVEGVKRFQAMQGLGADGVIGQSTRDWLNVSSAQRAGVLALNIQRLR-LLPGKLST 356

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +K
Sbjct: 357 G-IMVNIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARK 415

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINAMA 309
           D++  +R +P YL+ +   ++     +  ++   VDW++    N  F F+Q PG  N++ 
Sbjct: 416 DILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTITENNLPFRFQQAPGARNSLG 475

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    S +  Y+HDTP   LF   VR  +SGCVRV    +L   LL+D   W+   I 
Sbjct: 476 RYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKASELANMLLQDA-GWNDTRIS 534

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 535 DALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDIYNYD 578


>gi|261339259|ref|ZP_05967117.1| hypothetical protein ENTCAN_05495 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319116|gb|EFC58054.1| putative periplasmic protein [Enterobacter cancerogenus ATCC 35316]
          Length = 607

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 174/354 (49%), Gaps = 37/354 (10%)

Query: 94  WPEL-PIRPLHLGNSSVSVQRLRERLIISGDLD------------------PSK------ 128
           WP+L     L  G  S  V  LRE L  SG LD                  PS       
Sbjct: 239 WPQLRATATLRPGQWSSDVPALREILSRSGILDGGPNIALPGDDSQNVVVSPSAPVKEKK 298

Query: 129 --GLS---VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
             GL+    A+D  + +AVK FQ   GL   G++  ST + +NV    R   L +N+ R+
Sbjct: 299 AVGLNNKPAAYDRELVAAVKQFQAAQGLGADGVIGQSTRDWLNVSPAQRAGVLALNIQRL 358

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + LL   +    ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +N ++ NP 
Sbjct: 359 R-LLPGTLSTG-IMVNIPAYSLVYYQDGNEVLASRVIVGRPDRKTPMMSSALNNVVVNPP 416

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPN--FIFR 299
           W +P ++ +KD++  +  DP YL+ +   ++     +  ++   VDW++    N  F F+
Sbjct: 417 WNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPYMVDWSTITASNLPFRFQ 476

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D
Sbjct: 477 QAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQKDTRALSSGCVRVNKASELANMLLQD 536

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 537 A-GWNDTRISDALKQGDTRYVNIRHNIPVNLYYLTAFVGADGRTQYRTDIYNYD 589


>gi|217970214|ref|YP_002355448.1| ErfK/YbiS/YcfS/YnhG family protein [Thauera sp. MZ1T]
 gi|217507541|gb|ACK54552.1| ErfK/YbiS/YcfS/YnhG family protein [Thauera sp. MZ1T]
          Length = 549

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 169/341 (49%), Gaps = 4/341 (1%)

Query: 86  QDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Q  L+ G WP++   P L  G SS  V  LR RL  +G+          +D  +  AVK 
Sbjct: 206 QGRLAVGDWPKVAAGPTLKPGASSSRVASLRARLAAAGERVSEARDKSHYDEALVEAVKR 265

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL   G++ + TLEA+N     R+ Q++ NL R++ +     G R +LV+I    
Sbjct: 266 FQAAHGLQADGVLGAQTLEALNASPAQRVAQIRANLERLRWVASDLQGDR-LLVDIVGYH 324

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
            + V +G+    S VIVG+  R+TP L   +  ++ NP WV+P +I+++D++    ++P 
Sbjct: 325 ADLVLDGQPVWSSRVIVGKPKRRTPSLLDSVTHLVLNPKWVVPPTILREDVIPGAARNPS 384

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTY 322
           YL +  + ++D  G+ V    +DW+      F +R  Q  G   ++   K    +    Y
Sbjct: 385 YLANRRLRVVDRSGQTVDPATIDWSGARQSGFPYRVEQQSGADGSLGRIKFSLSNPYVIY 444

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDT    LF    R  +SGCVRV    +L V LL D+  WS   ++  + + +T  V +
Sbjct: 445 LHDTNARSLFKRAERALSSGCVRVEKPEELAVLLLADSGRWSAQALQAALDSGRTRTVDV 504

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
             +V V   Y +A   +   +  R+DIYG D   V  +  P
Sbjct: 505 GRDVKVLLHYATAALDEAGRVLLRNDIYGYDAAIVAALDAP 545


>gi|16759864|ref|NP_455481.1| hypothetical protein STY0997 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142363|ref|NP_805705.1| hypothetical protein t1939 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213424610|ref|ZP_03357393.1| hypothetical protein SentesTyphi_02366 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213650528|ref|ZP_03380581.1| hypothetical protein SentesTy_26793 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|25367958|pir||AI0615 probable exported protein STY0997 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16502157|emb|CAD05395.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137993|gb|AAO69554.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 615

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|168233416|ref|ZP_02658474.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|194468577|ref|ZP_03074561.1| YcbB [Salmonella enterica subsp. enterica serovar Kentucky str.
           CVM29188]
 gi|194454941|gb|EDX43780.1| YcbB [Salmonella enterica subsp. enterica serovar Kentucky str.
           CVM29188]
 gi|205332469|gb|EDZ19233.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
          Length = 615

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|168237100|ref|ZP_02662158.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194734245|ref|YP_002114048.1| hypothetical protein SeSA_A1110 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194709747|gb|ACF88968.1| YcbB [Salmonella enterica subsp. enterica serovar Schwarzengrund
           str. CVM19633]
 gi|197289807|gb|EDY29168.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
          Length = 615

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|168822072|ref|ZP_02834072.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205341461|gb|EDZ28225.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|320085238|emb|CBY95023.1| Uncharacterized protein ycbB [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 615

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|213027433|ref|ZP_03341880.1| hypothetical protein Salmonelentericaenterica_35663 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 410

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 122 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 181

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 182 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 238

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 239 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 298

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 299 LGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 357

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 358 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 403


>gi|145599560|ref|YP_001163636.1| hypothetical protein YPDSF_2288 [Yersinia pestis Pestoides F]
 gi|145211256|gb|ABP40663.1| hypothetical protein YPDSF_2288 [Yersinia pestis Pestoides F]
          Length = 618

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 143/280 (51%), Gaps = 8/280 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L         ++VNI
Sbjct: 326 AVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGHVDN--GIMVNI 383

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S++++D++   R
Sbjct: 384 PNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKAR 443

Query: 261 QDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
            D  Y + N   ++     +  V     +DW+   P NF +  RQ PG  N++   K   
Sbjct: 444 NDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGANNSLGRFKFNM 503

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +   VK  
Sbjct: 504 PSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDALVSSKVKQG 562

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 563 DTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 602


>gi|89074934|ref|ZP_01161384.1| hypothetical amidase [Photobacterium sp. SKA34]
 gi|89049331|gb|EAR54894.1| hypothetical amidase [Photobacterium sp. SKA34]
          Length = 587

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 151/281 (53%), Gaps = 4/281 (1%)

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           V  ++K FQ RHGL   G++ ++T++ + +P     R+L +N +R+  L +   G  ++ 
Sbjct: 288 VFESLKTFQKRHGLANDGIIGAATVQQLVMPYGDIARRLALNKLRVATLNKHTEGRPHIW 347

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNIP   LE  + G V   S VIVGR +R T +  S I  ++ NPYW +P +I Q D++ 
Sbjct: 348 VNIPNYKLEVFDKGNVVFESKVIVGRDNRPTNLFSSAITTMVVNPYWNVPITIKQHDVIP 407

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNF--IFRQDPGKINAMASTKI 313
            ++ D  YLK +N+ +++       +    ++W +  P  F   F+Q PG  N++   K 
Sbjct: 408 KVKHDIDYLKQHNMQILNSWRDRTVISPSSINWETVNPKTFPHEFQQGPGPRNSLGRVKF 467

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              +    ++HDTP   LF+   R  +SGCVRV    DL  ++++     +    ++++ 
Sbjct: 468 LMPNDYAIFLHDTPSRGLFSKNKRDLSSGCVRVERAYDLANYVIEYQNRGNIPKFKQMLD 527

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            +K   V L+  + V FVY++AW   D  +Q R+DIYG D+
Sbjct: 528 AQKQKTVSLSKRIDVDFVYLTAWVDHDGNVQMREDIYGYDS 568


>gi|213160796|ref|ZP_03346506.1| hypothetical protein Salmoneentericaenterica_12358 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
          Length = 397

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 98  AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 157

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 158 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 214

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 215 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 274

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 275 LGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 333

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 334 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 379


>gi|262275620|ref|ZP_06053429.1| hypothetical protein VHA_002601 [Grimontia hollisae CIP 101886]
 gi|262219428|gb|EEY70744.1| hypothetical protein VHA_002601 [Grimontia hollisae CIP 101886]
          Length = 505

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 159/285 (55%), Gaps = 10/285 (3%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           ++A +  AVK FQ  HGL   G++ ++T   MN+    RI+ L +N+ R++    ++  +
Sbjct: 210 YNATLVEAVKRFQENHGLKKDGVIGNNTRRWMNMSPSSRIQILALNMERLRLWPTEREKI 269

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             +LVNIP   +E   + K+ L S V+VGR  R+TP+  SR++ ++FNP W +P  I+++
Sbjct: 270 --ILVNIPNYEMEFWLDRKLILDSKVVVGRPSRRTPLFESRLDSVVFNPSWNVPVKIMRE 327

Query: 254 DMMALLRQDPQYLKDNNIHMIDE--KGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMA 309
           D++  ++QD +YL  ++  ++     G  +  EE+DW +  P +F +R  Q PG  NA+ 
Sbjct: 328 DILPKVQQDNEYLNKHSYTVLSSWVNGSVISAEEIDWETVSPNSFPYRLQQSPGSFNALG 387

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI-IDLDVWLLKDTPTWSRYHI 368
             K    + N  Y+HDTP   LFN   R  +SGC+RV+   I  ++ L K       Y  
Sbjct: 388 RYKFNTPNGNAIYLHDTPAKELFNKSRRAYSSGCIRVQKAEILAEILLNKSGKRLGDY-- 445

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           E   +  +T  V L  ++ VH +Y +AW  ++  +QFR+D+Y  D
Sbjct: 446 EYYQRIPETKWVSLRQKISVHTIYQTAWV-EEGKVQFREDVYRYD 489


>gi|332141802|ref|YP_004427540.1| putative periplasmic protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551824|gb|AEA98542.1| putative periplasmic protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 462

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 177/376 (47%), Gaps = 44/376 (11%)

Query: 75  IAQTEKAIAFYQDILSRGGWPEL---------PIR-------PLHLGNSSVSVQRLRERL 118
           + Q + A AFY  I  +GGW  L          +R       P++    + ++  L  RL
Sbjct: 81  LKQMKSAYAFYSSIAQQGGWKALNEDLLLKNGALRKAAADETPIYSEEQAQAITALISRL 140

Query: 119 ---------IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
                      +  L         F+  VE+AVK FQ RHGL   G+V   TL A+NV  
Sbjct: 141 GREYPSINTNCTHALTAVNSAPCVFNKDVENAVKDFQRRHGLLVDGVVGRKTLAALNVTA 200

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             + +QL +N+ R++ + E+K    YVLVNIP   L  + NGKV     V+VG+    TP
Sbjct: 201 KKKAQQLALNITRLE-MFEEKDSDAYVLVNIPEFRLRYISNGKVKATKDVVVGKPSWATP 259

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE---- 285
                I + + NP W IP SI  K++   +  +P YL++NNI +     K+ FV++    
Sbjct: 260 SFSDHIEKFVVNPEWRIPISIATKEIAPKVADNPNYLEENNIVI----RKDSFVDDELVD 315

Query: 286 ---VDWNSPEPPNF--IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
              +DW   +P  F     + P + N +   K  F +R+  Y+HDTP    F    R  +
Sbjct: 316 PNTIDWEDMKPYQFDHFLVKLPNEKNPLGKVKYLFPNRHAVYVHDTPYQQWFKETNRAAS 375

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK---LATEVPVHFVYISAWS 397
            GC+R+ +   L   + ++    S   ++ V+  R+ +  K   L   +P+H VY +AW+
Sbjct: 376 HGCIRLEDPFSLAQLIAEEQGVDSL--MDNVISARELSQSKTFHLEEPLPIHLVYWTAWA 433

Query: 398 PKDSIIQFRDDIYGLD 413
            ++    FR+DIY  D
Sbjct: 434 DENGKANFRNDIYQRD 449


>gi|222109387|ref|YP_002551651.1| erfk/ybis/ycfs/ynhg family protein [Acidovorax ebreus TPSY]
 gi|221728831|gb|ACM31651.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax ebreus TPSY]
          Length = 533

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 165/351 (47%), Gaps = 22/351 (6%)

Query: 82  IAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDP-------SKGL 130
           +A Y+ + +   W    P LP R L  G     +  L ERL+  GDL P       +   
Sbjct: 158 LAHYRALGAHPAWAQPLPALPGRKLTPGQPWEGLGVLAERLVALGDLPPQPTGEPPAASA 217

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ--LQVNLMRIKKLLE 188
              +   +  A   FQ RHGL+  G++ ++TL A+NVP   R  Q  LQ+  +R   +L+
Sbjct: 218 PAQYTPVLVEAATAFQRRHGLEADGVLGATTLAALNVPPAARAEQIALQMERLRWTPVLQ 277

Query: 189 QKMGLRYVLVNIPAASLEAVE--NGKVGLRST--VIVGR-VDRQTPILHSRINRIMFNPY 243
              G R + VN+P   L A E   G++ LR +  VIVG+ +D +TP+    +  I F+PY
Sbjct: 278 ---GPRMIAVNVPEYRLRAYEYAGGRITLRLSMAVIVGKALDTRTPLFDEDMQSIEFSPY 334

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W IP SI + + +  LR+DP YL    +  +   G           +        RQ PG
Sbjct: 335 WNIPPSIARGETVPRLRRDPGYLARQGMEFVSAAGVSTDTTPEMLGAVVAGQARIRQRPG 394

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            +NA+   K    + +N Y+H T  P LF    R  + GCVRV   + L  ++L+D PTW
Sbjct: 395 PLNALGDIKFVLPNNDNIYLHHTSAPTLFGRSRRDLSHGCVRVGEPVALAQFVLQDDPTW 454

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +   I   +   K   V+L   VPV   +I+    +D    F  D+YG D 
Sbjct: 455 TVERIRAAMAQPKPVFVRLPHPVPVIITHITVVV-QDGRPHFYGDLYGHDR 504


>gi|332525152|ref|ZP_08401329.1| peptidoglycan-binding domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332108438|gb|EGJ09662.1| peptidoglycan-binding domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 547

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 177/356 (49%), Gaps = 24/356 (6%)

Query: 76  AQTEKAIAFYQDILSRGGW----PELP----IRPLHLGNSSVSVQRLRERLIISGDLDPS 127
           A+  +A+A Y+ +     W    P LP     R L  G +   +  L  RL+  GDL   
Sbjct: 180 AELRQALARYRTLEHDPAWAAPLPPLPQVGRTRKLEPGAAWPGLPALAARLVALGDLPAG 239

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK--K 185
                 +   +   V+ FQ RHG+   G++ ++T   + V    R  QL + L R++   
Sbjct: 240 PHAGTVYAEPLVGGVRRFQQRHGVSADGVIGAATFSRLEVKPAARAEQLVLALERLRWTP 299

Query: 186 LLEQKMGLRYVLVNIPAASLEA--VENGKVGL--RSTVIVGR-VDRQTPILHSRINRIMF 240
           LLE +   R V+VNIP   L A  V++G++ +  R  V+VG+ +D++TP++ +++  I F
Sbjct: 300 LLESR---RMVVVNIPEFVLRAYEVQDGRITVVQRMRVVVGQALDKRTPLIDAQMRAIEF 356

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFI 297
           +PYW +P SI++ + +  LR+DP YL       +   G    EV  E +D  +     + 
Sbjct: 357 SPYWNVPPSIVRAETLPKLRRDPDYLAREGFEFVAGDGSVHGEVSAEALDALAAG--RWR 414

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ PG  NA+   K  F +    Y+H TP   LF    R  + GCVR+ + + L +++L
Sbjct: 415 IRQRPGPRNALGDIKFVFPNAEQIYLHHTPSTALFARDRRDFSHGCVRIEDPLALAMFVL 474

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +D P W    I E +   ++  ++LAT V V   Y +A   KD  + F DDIY  D
Sbjct: 475 RDQPDWPEARIREAMDAGESRTLRLATPVRVLIAYGTALV-KDGQVYFFDDIYRQD 529


>gi|270261208|ref|ZP_06189481.1| hypothetical protein SOD_a04330 [Serratia odorifera 4Rx13]
 gi|270044692|gb|EFA17783.1| hypothetical protein SOD_a04330 [Serratia odorifera 4Rx13]
          Length = 611

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 151/299 (50%), Gaps = 13/299 (4%)

Query: 126 PSKGLSVAFDAYVE---SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           P+  ++V  +AY       VK FQ   GL   G++ + T E +NV    R   L +N+ R
Sbjct: 301 PAGPVTVTDNAYTPDLVEGVKRFQKWQGLTADGVIGARTREWLNVSPQTRASLLALNIQR 360

Query: 183 IKKLLEQ-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           ++ L      G   ++VNIP  SL   +NG   L S VIVGR  R+TP+++S +N ++ N
Sbjct: 361 LRILPGYVDTG---IMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMNSALNNVVVN 417

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF 298
           P W +P +++++D++    +D  Y + +   ++     +  V     +DWN     NF +
Sbjct: 418 PPWNVPTTLVREDIVPKAMRDGSYFQKHGYTVLSGWSNDAEVINPAMIDWNMVSARNFPY 477

Query: 299 --RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   L
Sbjct: 478 RIRQAPGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANML 537

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           L+D   W+   +   +K   TT V +   +PV   Y++AW   D   QFR DIY  D+ 
Sbjct: 538 LQDA-GWNNTRVSSTLKGGNTTYVNIRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDDT 595


>gi|116620897|ref|YP_823053.1| peptidoglycan binding domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116224059|gb|ABJ82768.1| Peptidoglycan-binding domain 1 protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 401

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 162/321 (50%), Gaps = 11/321 (3%)

Query: 105 GNSSVSVQRLRERLIISGDL--DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G++      L  RL + GDL  D     S  ++  +  AVK FQ RHGL P G ++++TL
Sbjct: 72  GDAYSDAPLLIRRLSLLGDLAADAVPSDSDVYEGELVEAVKRFQSRHGLKPDGRIEATTL 131

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG----LRST 218
             +NVP+  R+RQL+++  R ++          VL N+P   L A      G    L   
Sbjct: 132 GQLNVPLCARVRQLELSAERWRRHPYDPTRPAIVL-NLPEFRLRAYGGTDAGSDPELEMK 190

Query: 219 VIVGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
           V+VG+  D ++PIL S++  ++F PYW +P SI + +++ L+R+DP ++  N   ++  +
Sbjct: 191 VVVGKAPDHKSPILLSQLQAVIFRPYWKVPVSIQRNELLPLIRKDPAWVSANRFELVTPQ 250

Query: 278 GKEVFVEEVDWNSPE---PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           G+    E++   + E         RQ PG  N++   K  F +    YMHDT    LF  
Sbjct: 251 GEVAEEEKLSEETLEDISTGKLQLRQKPGPKNSLGLVKFLFPNEYGVYMHDTAAHSLFAR 310

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
             R  + GC+RV    DL  W+L++   W R  IEE ++  +   VK+   + +  +Y +
Sbjct: 311 ERRDLSHGCIRVEKPEDLAAWVLREQSDWPRERIEEAMQGTEPVSVKVKRPIQIVMMYST 370

Query: 395 AWSPKDSIIQFRDDIYGLDNV 415
           A   K+  + F  DIYG D V
Sbjct: 371 ASVMKNGEVHFFRDIYGEDAV 391


>gi|62179522|ref|YP_215939.1| hypothetical protein SC0952 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62127155|gb|AAX64858.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322713990|gb|EFZ05561.1| N-6 adenine-specific DNA methylase, conserved site [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 615

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 151/286 (52%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 551

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +    PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 552 ISGALKQGDTRYVNIRQNTPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|94968926|ref|YP_590974.1| hypothetical protein Acid345_1899 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550976|gb|ABF40900.1| conserved hypothetical protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 561

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 170/327 (51%), Gaps = 11/327 (3%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDP 153
           LP+  ++ G     +  L +RL   GDLDP   +   ++ +D  +   V  FQ RHGL  
Sbjct: 222 LPVGVVYQGGYYDHMPALAKRLQQLGDLDPKVIILADAIKYDDPLMGGVAHFQSRHGLPN 281

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGK 212
            G + S T++A+N+P+  R+ QL++ L R + +  Q      V+VN+P   L   + +G 
Sbjct: 282 DGNLTSDTIDALNIPIADRLEQLKLALERYRWIRYQFTSPP-VVVNVPEFKLFGYDGSGT 340

Query: 213 VGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
             L   V VG   D QTPI    I  I+F PYW +  +I + +M+  + +D  YL+ N +
Sbjct: 341 QILSMGVNVGDAFDFQTPIFEGDIRYIVFRPYWYVTPTIQRDEMVPSVEEDRTYLEQNEM 400

Query: 272 HMIDEKGKEV---FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
            ++D+ GK +    + +      +  ++  RQ PG  NA+   KI F + +N Y+HDTPE
Sbjct: 401 EVVDKDGKVIASGAISDAVLKHLKNGSYSIRQRPGADNALGLVKIIFPNSHNVYLHDTPE 460

Query: 329 -PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK-TRKTTPVKLATEV 386
              +F+   R  + GC+ +    DL  WLL+D   WS   ++E ++  R  + V L   V
Sbjct: 461 FKTMFSKAPRALSHGCIHLEKPADLAYWLLRDKTDWSLDKVKEAMQHGRDNSSVTLTKPV 520

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLD 413
           P+  +Y++A +  +  +QF  DIYG D
Sbjct: 521 PILILYVTARAQTNGTVQFFKDIYGHD 547


>gi|317491480|ref|ZP_07949916.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316921027|gb|EFV42350.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 608

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 146/281 (51%), Gaps = 10/281 (3%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL-EQKMGLRYVLVN 199
           AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L  E   G   ++VN
Sbjct: 315 AVKRFQQWQGLASDGVIGKRTREWLNVSPQTRATLLALNIQRLRILPGEVDTG---IMVN 371

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP  SL   +NG   L S VIVGR  R+TP+++S +N ++ NP W +P ++I++D++   
Sbjct: 372 IPNYSLIYYQNGTEVLTSRVIVGRPTRKTPLMNSELNNVVVNPPWNVPTTLIREDIVPKA 431

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIFR--QDPGKINAMASTKIE 314
            +DP Y + +   +      +  V +   +DW S  P NF +R  Q PG  N++   K  
Sbjct: 432 MRDPGYFERHGYRLFSGWSNDAEVVDPYMIDWASVSPRNFPYRIQQAPGVNNSLGRYKFN 491

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             S++  Y+HDTP   LF   +R  +SGCVRV     L   LL+D   W+   +   +K 
Sbjct: 492 MPSQDAIYLHDTPNHGLFEKDIRALSSGCVRVNKASTLANMLLQDA-GWNDARVSSALKE 550

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             T  V +   +PV   Y++AW  +D   QFR DIY  D+ 
Sbjct: 551 GNTKYVPIRHRIPVRLYYLTAWVSEDGKPQFRTDIYNYDDT 591


>gi|94312745|ref|YP_585954.1| hypothetical protein Rmet_3815 [Cupriavidus metallidurans CH34]
 gi|93356597|gb|ABF10685.1| conserved hypothetical protein (peptidoglycan-binding domain)
           [Cupriavidus metallidurans CH34]
          Length = 540

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 167/344 (48%), Gaps = 10/344 (2%)

Query: 81  AIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
           A++ Y+ + ++  W    P  P   L +G     + ++ +RL   GDL     +   ++ 
Sbjct: 174 ALSRYRALATQPLWNTPLPTPPGNKLAIGQPYDGLAQMAQRLEALGDLPQGTPVPKKYEG 233

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            + +AV+ FQ RHGLD  G++   TL  +N     R++Q+ + + R++       G R +
Sbjct: 234 ALVTAVESFQKRHGLDADGVIGQGTLAQLNTTPSERVKQIALTMERLR-WTPLTAGPRVI 292

Query: 197 LVNIPAASLEAVE--NGK--VGLRSTVIVGR-VDRQTPILHSRINRIMFNPYWVIPRSII 251
           +VNIP   L A +  +GK  + L   VIVG+ ++ +TP+    +  I F+PYW +P SI 
Sbjct: 293 VVNIPEFMLRAYDYVDGKLDIKLEMKVIVGKALNTRTPMFREDMRYIEFSPYWNVPPSIA 352

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
           + +++   R+DP Y        +        +   + ++        RQ PG +NA+   
Sbjct: 353 RSEVVPKSRRDPGYFTRQGFEFVSGGQAITTLSSANLDAVLNGQMRIRQRPGPLNALGDI 412

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F +  N Y+H TP P LF    R  + GC+RV   + L  ++L+D P W+   I + 
Sbjct: 413 KFVFPNNQNIYLHHTPTPQLFQRGRRDFSHGCIRVEEPVQLAKFVLQDMPEWTEERIRQA 472

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           +   K+  + L   +PV   Y +A +  D  + F  DIYG D +
Sbjct: 473 MSKGKSNTIALKQPLPVVLAYGTAIARADGRVYFLPDIYGQDKL 516


>gi|254454682|ref|ZP_05068119.1| hypothetical protein OA238_5313 [Octadecabacter antarcticus 238]
 gi|198269088|gb|EDY93358.1| hypothetical protein OA238_5313 [Octadecabacter antarcticus 238]
          Length = 535

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 173/334 (51%), Gaps = 10/334 (2%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + +L++GGW P +    L +G S V+V  LR+RL+  G ++ S   +  +DA ++ AV+ 
Sbjct: 189 ERLLAQGGWGPAVSSGSLAVGASGVAVVALRDRLVAMGYMERSA--TQIYDATIQEAVQR 246

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL   G   + TL  +NVP   R++Q+ V + R ++ + +  G R+V VN+   S
Sbjct: 247 FQQTHGLAEDGEAGAGTLTEINVPAASRLQQIIVAMER-ERWMNRPRGERHVWVNLVDFS 305

Query: 205 LEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              ++N +V  ++  ++G    +RQTP     +  ++ NP W +PRSI+  + +  L+ +
Sbjct: 306 AAIMDNDRVTFQTRSVIGATGSNRQTPEFSDVMEYMVINPSWYVPRSIVVNEYLPALQSN 365

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
              +  ++I + D  G+ +    V+++      F +  RQ P + NA+   K  F ++ N
Sbjct: 366 RNAV--SHIEITDSNGRAINRSNVNFSQFNSRTFPYSMRQPPSRGNALGLVKFIFPNQYN 423

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF   VR  + GC+R+ +  D    LL           +  + T + T V
Sbjct: 424 IYLHDTPAKSLFGREVRAFSHGCIRLNDPFDFAYALLAAQEDDPEGVFQSHLDTGRETRV 483

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L   VPVH VY +A++     + FR D+Y  D+
Sbjct: 484 NLDEPVPVHLVYRTAFTHTTGQLNFRRDVYDRDS 517


>gi|224582805|ref|YP_002636603.1| hypothetical protein SPC_0996 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224467332|gb|ACN45162.1| hypothetical protein SPC_0996 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 639

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 151/286 (52%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 340 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 399

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 400 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 456

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 457 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 516

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 517 LGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 575

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+  DIY  D
Sbjct: 576 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYHTDIYNYD 621


>gi|157369969|ref|YP_001477958.1| hypothetical protein Spro_1726 [Serratia proteamaculans 568]
 gi|157321733|gb|ABV40830.1| Peptidoglycan-binding domain 1 protein [Serratia proteamaculans
           568]
          Length = 613

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 143/281 (50%), Gaps = 10/281 (3%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVN 199
            VK FQ   GL   G++   T E +NV   +R   L +N+ R++ L      G   ++VN
Sbjct: 321 GVKRFQKWQGLSADGVIGVRTREWLNVTPQIRASLLALNIQRLRILPGHVDTG---IMVN 377

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P +++++D++   
Sbjct: 378 IPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTTLVREDIVPKA 437

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIE 314
            +D  Y + +   ++     +  V     +DW+   P NF +  RQ PG  N++   K  
Sbjct: 438 MRDGSYFQKHGYTVLSGWSNDAEVINPAMIDWSMISPRNFPYRIRQAPGATNSLGRFKFN 497

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +   +K 
Sbjct: 498 MPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNNTRVSSTLKQ 556

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             TT V +   +PV   Y++AW   D   QFR DIY  D+ 
Sbjct: 557 GNTTFVNIRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDDT 597


>gi|163751738|ref|ZP_02158956.1| hypothetical protein KT99_12214 [Shewanella benthica KT99]
 gi|161328390|gb|EDP99549.1| hypothetical protein KT99_12214 [Shewanella benthica KT99]
          Length = 453

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 166/329 (50%), Gaps = 13/329 (3%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS---KGLSVAFDAYVESAVKLFQMRHG 150
           WP +      LG SS  VQRLR  L + GDL+ S   +     +D  V   +K FQ RHG
Sbjct: 126 WPSVTRVNFKLGQSSQQVQRLRWMLTVLGDLENSELTRYREAIYDPMVIQGIKSFQRRHG 185

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L  +G +D+ T++A+N+    R+ Q+Q NL R   +L      +Y+ +NIP  SLE    
Sbjct: 186 LTANGELDAPTVQALNISPKRRVIQMQQNLWRWI-MLPSSPPPKYIKINIPNYSLELFVL 244

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL--KD 268
           G++ L   VIVG+    TP+L +R+ R+  NPYW  P SII+ +++ L  ++P YL  K 
Sbjct: 245 GELDLSMKVIVGKPSSPTPVLLTRVTRMTINPYWTPPTSIIRSELLPLNSREPGYLNHKG 304

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FR--QDPGKINAMASTKIEFYSRNNTYMH 324
             +H + +K   V V+ ++    +    +  +R  Q PGK NA+   +    +  + Y+H
Sbjct: 305 FELHPVAKKDNPV-VKLINIAPRQLAELLKEYRLVQAPGKDNALGKLRFTIPNTESIYLH 363

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP+  LF       + GC+R+   + L  ++L      +   I   +    T  V L+ 
Sbjct: 364 DTPQKKLFAGNDLALSHGCIRLEKAVALFEYILSTQD--NAEEIRRALGQPNTRYVSLSN 421

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            +P+   Y +AW      +Q R DIY LD
Sbjct: 422 AIPIFITYQTAWVDSRGKLQLRPDIYHLD 450


>gi|90414498|ref|ZP_01222473.1| hypothetical protein P3TCK_00890 [Photobacterium profundum 3TCK]
 gi|90324406|gb|EAS40968.1| hypothetical protein P3TCK_00890 [Photobacterium profundum 3TCK]
          Length = 572

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 150/294 (51%), Gaps = 31/294 (10%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
            VK FQ RHGL   G++   T   + +    RIR L +N  R++    +   +  ++VNI
Sbjct: 281 GVKTFQKRHGLKVDGVIGPKTRYWLAITPKERIRVLALNAQRVRLWPAEHNSV--LIVNI 338

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   L    + K    S VIVGR  R+TP++ SR+N ++FNPYW +P+SI++KD++   R
Sbjct: 339 PGYDLNLWLDNKHVFDSKVIVGRPSRRTPLISSRVNSVVFNPYWNVPKSIMRKDILPKAR 398

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP-------PNFIF--------RQDPGKI 305
           +D  YL  +N  +I             WNS E        P+ ++        RQ PG  
Sbjct: 399 RDRSYLYRHNYAVIRS-----------WNSSEQIPIHTIHPSMLYAKTFPYRLRQKPGNK 447

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWS 364
           NA+   K    + ++ Y+HDTP   LFN   R  +SGCVRV N   L + LL  +  T  
Sbjct: 448 NALGLYKFNIPNDDSIYLHDTPAKSLFNKDDRAFSSGCVRVENADVLALILLNYSGVTEQ 507

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           R++  E+   +KT  + L  +V VH +Y +AW     ++ FRDD+Y  D V  G
Sbjct: 508 RFY--ELSGRKKTKTIGLRNKVQVHLIYQTAWVDDGGLVNFRDDVYLYDKVGDG 559


>gi|119945331|ref|YP_943011.1| cell wall degradation protein [Psychromonas ingrahamii 37]
 gi|119863935|gb|ABM03412.1| cell wall degradation protein [Psychromonas ingrahamii 37]
          Length = 513

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 170/321 (52%), Gaps = 15/321 (4%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL------FQMRHGLDPSGMV 157
           +G+S    + L  RL ISG+L   +   +  + +   + KL      FQ+RHGL+P G++
Sbjct: 196 IGDSLAQKKVLLSRLEISGELSSQEKQQIELENHQGYSQKLGEIIRSFQIRHGLEPDGII 255

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             +TL  +N+    R+R + +N++R  + L      R V++NIP  ++E  E  +    S
Sbjct: 256 GKNTLYWLNISRQERVRLMALNILR--QQLWTMDNTRKVIINIPDYTMEYWEEDQKIFES 313

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-- 275
            VIVG+  R+TP+  +++N I+FNP W +P  I+++D++  +  D  YL  ++  +I+  
Sbjct: 314 KVIVGQTKRKTPLFSAQLNAIVFNPRWNVPTIIMREDILPKVLLDINYLSRHSYEIIENY 373

Query: 276 EKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
           +  K +  E ++W      NF +  RQ  G+ NA+   K    + N+ Y+HDTP   LF 
Sbjct: 374 QSQKVIDAETINWKLITVHNFPYRLRQKSGENNALGLYKFNTPNNNSIYLHDTPAKNLFE 433

Query: 334 NVVRFETSGCVRVRNIIDLDVWLL-KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
              R  +SGC+RV+      ++L+ K      RY+I   V   +T+ V L  ++ V+ VY
Sbjct: 434 KQDRAFSSGCIRVQKAEQFALFLMDKSGYPLERYNIHHNVP--ETSSVSLKKKITVYSVY 491

Query: 393 ISAWSPKDSIIQFRDDIYGLD 413
            + W  +    QFR+DIY  D
Sbjct: 492 RTVWVDQFGFTQFRNDIYHYD 512


>gi|330445897|ref|ZP_08309549.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328490088|dbj|GAA04046.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 586

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 174/347 (50%), Gaps = 10/347 (2%)

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           T  A+A YQ++ +         R    G++      L + L   GD+D +    ++  A 
Sbjct: 221 TMDAVAKYQNLPAHTLKASDFTRVYRKGDTLPHGHELVKVLYTLGDMDQAHYDHLSHQAK 280

Query: 138 VES------AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
           + +      ++K FQ RHGL   G+V  +T++ + +P +   R+L +N +R+  L +   
Sbjct: 281 ITNTGAVFESLKTFQKRHGLSSDGIVGPATVQQLVMPYNEIARRLALNTLRVATLNKHSE 340

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
              ++ VNIP   LE  + G V   S VIVGR  R T +  S I  ++ NPYW +P +I 
Sbjct: 341 DRPHIWVNIPNYKLEVYDKGNVVFESKVIVGRDSRPTNLFSSAITTMVVNPYWNVPITIK 400

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPNFI--FRQDPGKINA 307
           Q D++  ++++  YLK +N+ +++       +    ++W++  P  F   F+Q PG  N+
Sbjct: 401 QHDVIPKVKRNIGYLKQHNMQILNSWRDRTVINPTSINWSTVNPKTFPHEFQQGPGPHNS 460

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    +    ++HDTP   LF+   R  +SGCVRV    DL  +++      +   
Sbjct: 461 LGRVKFLMPNDYAIFLHDTPARGLFSKTKRDLSSGCVRVERAYDLANYVIDYQNRGNIPA 520

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             +++   K   V L+  + V FVY++AW  ++  +Q R+DIYG D+
Sbjct: 521 FTKMLNAEKQKTVSLSKRIDVDFVYLTAWVDQNGKVQMREDIYGYDS 567


>gi|261246211|emb|CBG24015.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
          Length = 613

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 151/286 (52%), Gaps = 9/286 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 314 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 373

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 374 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 430

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  D  YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 431 RKDILPKVWNDLGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 490

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 491 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 549

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 550 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 595


>gi|312887255|ref|ZP_07746859.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311300567|gb|EFQ77632.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 544

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 164/320 (51%), Gaps = 18/320 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+++  +  +++RL +  D      L  A++A +++A+  FQ R+GL  +G+++  T+  
Sbjct: 239 GDTAAVIATVKKRLYLLEDFK-GDTLDRAYNADLDTAILQFQSRNGLLANGLLNKETVAE 297

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           MNVP+  RI+Q+ VN+ R +  L   +   Y+ VNIP   L       +     V+VG+ 
Sbjct: 298 MNVPLKKRIQQILVNMERCR-WLPISLNSDYLAVNIPEFKLHVFHADSLLWSCNVVVGQT 356

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
             QT + +  +  ++F+PYW +P SI+QK+++  +++   YL   + H +   G    + 
Sbjct: 357 MHQTTVFYGDVKYVVFSPYWNVPPSIVQKEVVPEMKRHRDYL---STHRMQITGYADGLP 413

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            +            RQ PG  N++   K  F +  N Y+HDTP   LF    R  + GC+
Sbjct: 414 TI------------RQLPGPENSLGLVKFLFPNSYNIYLHDTPSKSLFGESARAFSHGCI 461

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           RV+N   L  +LLKD   W    I+  +   K   V L  +VPV   Y +A++  ++ + 
Sbjct: 462 RVQNPTKLANFLLKDQKNWDAQKIDVAMHAGKEQYVTLQNKVPVFIAYFTAFTDGNNKLN 521

Query: 405 FRDDIYGLDNVHVGIIPLPE 424
           FR DIY LD+ H+  + + E
Sbjct: 522 FRKDIYNLDD-HLASMLIAE 540


>gi|56477065|ref|YP_158654.1| hypothetical protein ebA2890 [Aromatoleum aromaticum EbN1]
 gi|56313108|emb|CAI07753.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 543

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 167/330 (50%), Gaps = 13/330 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P R L  G +   +  L +RL+  GDL  +  + + ++  +   VK FQ RHGL   
Sbjct: 192 PRPPQRKLEPGQAYAGMPVLMQRLVALGDLPAATPVPLRYEGALVEGVKAFQRRHGLAED 251

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIK--KLLEQKMGLRYVLVNIPAASLEAVE--N 210
           G+V  +TLE ++V    R+RQ+++ L R++   LL+   G R ++VN+P   L A E  +
Sbjct: 252 GVVGKATLEQLDVSPVARVRQIELTLERLRWTPLLQ---GPRMIVVNVPEFVLRAYEARD 308

Query: 211 GKVGLRST--VIVGR-VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           G+V +++   VIVG  +D +TP+    +  I F+PYW +P SI + + +  LR+D  YL+
Sbjct: 309 GRVEVKTAMKVIVGSALDTRTPLFDEDMRFIEFSPYWNVPPSIARAETIPKLRRDAAYLR 368

Query: 268 DNNIHMIDEKGKEV--FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
                 +   G+ +  F  E   ++        RQ PG  NA+   K  F + +N ++H 
Sbjct: 369 QQGFEFVTGNGQVIPTFAPEY-LDAVLRGEMRIRQRPGPSNALGDIKFIFPNNDNIFLHH 427

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
           T  P LF    R  + GC+RV   + L  ++L+D P WS   I   +    +  ++L   
Sbjct: 428 TSTPRLFGKDRRDFSHGCIRVEEPVVLAKFVLQDDPEWSEERIRAAMAGGVSKTLRLREP 487

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           +PV   Y +     D ++ F  DIYG D +
Sbjct: 488 LPVVIAYSTVLVKSDGMVYFFRDIYGHDTL 517


>gi|149911416|ref|ZP_01900034.1| peptidoglycan binding domain protein [Moritella sp. PE36]
 gi|149805524|gb|EDM65529.1| peptidoglycan binding domain protein [Moritella sp. PE36]
          Length = 512

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 171/363 (47%), Gaps = 33/363 (9%)

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL--PIRPLHLGNSSVSVQRLRERLII 120
           IDS +P  +   + +  +AI  Y+ I     WP+L     P  LG     V+ LR++LI 
Sbjct: 148 IDSAMPQFN--AVIRLRQAINKYKGI-KNIAWPKLTDSFNP-QLGQGHAEVKILRKKLIT 203

Query: 121 SGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
             DL     SK     FD  + + +K FQ R+GL P+G ++++T  A+N  +D RI +LQ
Sbjct: 204 FNDLRTVSTSKHRLHIFDQSIINGLKHFQRRNGLKPTGRLNATTKNALNQNIDSRINKLQ 263

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +NL R   L  +    +Y++VNIPA  L  ++ G+  +   VIVG+   QTPI+ + +N 
Sbjct: 264 INLWRWLSL-PRIPPTKYIMVNIPAFDLRLIDKGEALMEMKVIVGKPSNQTPIMITEVNS 322

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN-- 295
           +  NP W   R+II  D++ L  ++   L   N ++    G      EV      PPN  
Sbjct: 323 VTLNPTWTPTRNIINNDLLPLHNKNHTALNSLNFYLAKGYGANTLYREV------PPNLQ 376

Query: 296 -----FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +   Q PG  NA+ + +    + N  ++HDTP   LF    R  + GC+R+    
Sbjct: 377 EMLKQYRLVQRPGSNNALGNVRFNIKNNNAIFLHDTPTKYLFKRQNRAFSHGCIRLEKSD 436

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           DL   L           I +      T  ++L   +PV   Y +AW      I +R+D+Y
Sbjct: 437 DLLTIL----------RINQRKNNSGTKHLRLQQSLPVFITYQTAWIDNLGEINWRNDLY 486

Query: 411 GLD 413
             D
Sbjct: 487 NKD 489


>gi|197284624|ref|YP_002150496.1| hypothetical protein PMI0730 [Proteus mirabilis HI4320]
 gi|194682111|emb|CAR41705.1| conserved hypothetical protein [Proteus mirabilis HI4320]
          Length = 571

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 145/285 (50%), Gaps = 8/285 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA + +AVK FQ  HGL+  G++   T   +N+    R   + +N+ R++  L   +G 
Sbjct: 273 YDAPLIAAVKSFQAAHGLETDGIIGRQTRNWLNMTPIQRAGIMALNIQRLR--LTPPIGD 330

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             + VNIP  SL    N ++ L S VIVGR DR+TPI+ S +N ++ NP W +P S+ +K
Sbjct: 331 TGIWVNIPDYSLYFYANNQLILDSKVIVGRPDRKTPIMSSALNNVVVNPPWNVPTSMTRK 390

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVF---VEEVDWNSPEPPNFIFR--QDPGKINAM 308
           D++   + DP Y       +    G + +     ++DW +    NF +R  Q PG  N++
Sbjct: 391 DIVPKGKADPSYFSRKGYTIYSGWGNDAYPINPYDIDWENISAANFPYRIWQAPGPTNSL 450

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    +    Y+HDTP   LF   +R  +SGC+RV     L   LL D   W +  I
Sbjct: 451 GRYKFNMPNSEAIYLHDTPNHNLFTKNMRAISSGCIRVNKAAQLATILLGDA-GWKQDRI 509

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +  +K   T    +   +PV+  Y +AW  +++  Q+R DIY  D
Sbjct: 510 DAALKRGSTQYAPIPERIPVYLYYQTAWVAEENAPQYRADIYNYD 554


>gi|254291719|ref|ZP_04962506.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422403|gb|EDN14363.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 524

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 156/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 234 YDASLEKPIKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 293

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 294 --IVVNVPGFDMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++++ +I        ++   +DW + EP  F +  RQ  G  NA+ 
Sbjct: 352 DILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALG 411

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 472 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|153827569|ref|ZP_01980236.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149738468|gb|EDM52864.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 524

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 156/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 234 YDASLEKLIKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 293

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 294 --IVVNVPGFDMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++++ +I        ++   +DW + EP  F +  RQ  G  NA+ 
Sbjct: 352 DILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWETVEPETFPYRLRQQAGVQNALG 411

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 472 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|153212308|ref|ZP_01948096.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124116686|gb|EAY35506.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 524

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 156/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 234 YDASLEKPIKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 293

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 294 --IVVNVPGFDMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++++ +I        ++   +DW + EP  F +  RQ  G  NA+ 
Sbjct: 352 DILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALG 411

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 472 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|323492996|ref|ZP_08098133.1| hypothetical protein VIBR0546_16236 [Vibrio brasiliensis LMG 20546]
 gi|323312775|gb|EGA65902.1| hypothetical protein VIBR0546_16236 [Vibrio brasiliensis LMG 20546]
          Length = 448

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 168/297 (56%), Gaps = 16/297 (5%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           LD  K +S  +D  +E+AVK FQ  HGL+  G++   T++ +N+P++ R+  L +N  R 
Sbjct: 154 LDVRKDVS-WYDRTLETAVKQFQRLHGLEADGIIGPETIKWINLPIEKRLAILAINAERN 212

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +    Q+  +  ++VN+P+  ++   +G+   +S V+VG+  R TP++ ++++ ++ NP 
Sbjct: 213 RYWPVQRDTI--IVVNVPSFQMKYWNSGQEVFQSKVVVGKKARPTPVMMTKLDSLILNPT 270

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNFIFR-- 299
           W +P  I+ +D++  ++QD +YL   NI +I + G +  +  +E+DW++  P  F +R  
Sbjct: 271 WNVPWKIMVEDIIPKVKQDREYLARQNIMIIPKWGSQEVINPDEIDWDNLNPHQFPYRMT 330

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q  G+ NA+   K    +R   Y+HDTP   LF+   R  +SGC+RV N    DV    D
Sbjct: 331 QLSGQANALGLYKFNTPNRRAIYLHDTPSKGLFDETQRAFSSGCIRVENA---DV--FAD 385

Query: 360 TPTWSRYHI---EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           T   ++  +   EE V       + L + +PVH +Y +AW  ++  + +R+DIY LD
Sbjct: 386 TLLQTQGLVIEQEEQVSPTPNQAIPLKSRIPVHIIYQTAWY-EEGNVHYREDIYRLD 441


>gi|59711764|ref|YP_204540.1| carboxypeptidase [Vibrio fischeri ES114]
 gi|59479865|gb|AAW85652.1| predicted carboxypeptidase [Vibrio fischeri ES114]
          Length = 515

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 171/322 (53%), Gaps = 25/322 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAV---KLFQMRHGLD 152
           IRP  L + +  + RL+    +SG+++  +    L  + D Y  S V   K FQ RHGL 
Sbjct: 188 IRPNQLTDVNAIIYRLQ----VSGEINHQEADMLLRQSNDHYDSSLVLIIKEFQKRHGLK 243

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++   TL  +N+    R+R + +N+ R++ L E K    +VLVNIP+  +   + G+
Sbjct: 244 QDGIIGPKTLHWLNMTAKERVRIMALNIQRLR-LWENKNS-NFVLVNIPSYEMAYWQEGE 301

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           +   S VIVG+ +R+TPI  +R+N I+FNP W +P  I+++D++     +  +L+  N  
Sbjct: 302 LVFTSKVIVGKPERRTPIFTTRLNAIVFNPEWKVPTKIMREDILPKALNNKDFLQSQNFE 361

Query: 273 MIDEK-GKEVF-VEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           +I     KEV  ++++DW       F +  +Q  G  NA+   K    +RN  Y+HDTP 
Sbjct: 362 IIPTWLSKEVISIDDIDWEQVNVETFPYKLKQKSGNTNALGRYKFNTPNRNAIYLHDTPS 421

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKD----TPTWSRYHIEEVVKTRKTTPVKLAT 384
             LF+   R  +SGC+RV    +    L+K+    T  +  YH     +  +T+ V L  
Sbjct: 422 RSLFSKQHRAYSSGCIRVEKASEFAQLLMKESHFSTQDYKDYH-----ELPETSKVSLDQ 476

Query: 385 EVPVHFVYISAWSPKDSIIQFR 406
           ++ V+ +Y ++W  +D+ +QFR
Sbjct: 477 QISVYTIYQTSWVGEDNQVQFR 498


>gi|54309518|ref|YP_130538.1| hypothetical protein PBPRA2351 [Photobacterium profundum SS9]
 gi|46913954|emb|CAG20736.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 572

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 101/294 (34%), Positives = 150/294 (51%), Gaps = 31/294 (10%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
            VK FQ RHGL   G++   T   + +    RIR L +N  R++    +   +  ++VNI
Sbjct: 281 GVKTFQKRHGLKVDGVIGPKTRYWLAITPKERIRVLALNAQRVRLWPAEYNSV--LIVNI 338

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   L    + K    S VIVGR  R+TP++ SR+N ++FNPYW +P+SI++KD++   R
Sbjct: 339 PGYELNLWLDNKHVFDSKVIVGRPSRRTPLISSRVNSVVFNPYWNVPKSIMRKDILPKAR 398

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP-------PNFIF--------RQDPGKI 305
           +D  YL  +N  +I             WNS E        P+ ++        RQ PG  
Sbjct: 399 RDRSYLYRHNYAVIRS-----------WNSSEQIPIHTIHPSMLYAKTFPYRLRQKPGNK 447

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWS 364
           NA+   K    + N+ Y+HDTP   LFN   R  +SGCVRV N   L + LL  +  T  
Sbjct: 448 NALGLYKFIIPNDNSIYLHDTPAKSLFNKDDRAFSSGCVRVENADVLALILLNYSGVTDQ 507

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           R++  E+   ++T  + L  +V VH +Y +AW     ++ FRDD+Y  D V  G
Sbjct: 508 RFY--ELSGRKQTKTIGLRNKVKVHLIYQTAWVDDGGLVNFRDDVYLYDKVGGG 559


>gi|90579549|ref|ZP_01235358.1| hypothetical protein VAS14_01266 [Vibrio angustum S14]
 gi|90439123|gb|EAS64305.1| hypothetical protein VAS14_01266 [Vibrio angustum S14]
          Length = 579

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 154/280 (55%), Gaps = 11/280 (3%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYVLVN 199
           A+K FQ RHGL   G++   T + + + +  RIR L +N  R++   ++   G   ++VN
Sbjct: 289 AIKRFQERHGLKSDGVIGPQTQQWLALNIKERIRLLALNAQRMRLWSVKPDTG---IVVN 345

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP+  +     G+  L S VIVGR  RQTP+++S I  ++FNPYW +P SI++KD+M  +
Sbjct: 346 IPSYYMNLWLEGEKVLGSKVIVGRPSRQTPMIYSDIQSVVFNPYWNVPNSIMKKDIMPKV 405

Query: 260 RQDPQYLKDNNIHMID--EKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
           R++  YL ++N  +I   + G+++ +  + ++   P  F +  RQ PGK NA+   K  F
Sbjct: 406 RRNRNYLANHNYEVIKGWDNGQKIAINSIPYHLLSPNRFPYRLRQKPGKRNALGLYKFNF 465

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +    Y+HDT    LF    R  +SGC+RV     L   LL+ + + S    + + ++R
Sbjct: 466 PNNQAIYLHDTASRSLFKKHERALSSGCIRVEQAKSLAKVLLEYSGS-SVQRFDNLSRSR 524

Query: 376 KTTPVKL--ATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           KT  + L  +  VPV  +Y +AW     ++ +R DIY  D
Sbjct: 525 KTRTIVLGDSKSVPVDLIYQTAWVDDLGLVHYRSDIYEYD 564


>gi|153801328|ref|ZP_01955914.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229529651|ref|ZP_04419041.1| hypothetical protein VCG_002746 [Vibrio cholerae 12129(1)]
 gi|124123153|gb|EAY41896.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229333425|gb|EEN98911.1| hypothetical protein VCG_002746 [Vibrio cholerae 12129(1)]
          Length = 524

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 156/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 234 YDASLEKLIKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 293

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 294 --IVVNVPGFDMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++++ +I        ++   +DW + EP  F +  RQ  G  NA+ 
Sbjct: 352 DILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALG 411

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 472 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|294140768|ref|YP_003556746.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12]
 gi|293327237|dbj|BAJ01968.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12]
          Length = 482

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 177/379 (46%), Gaps = 27/379 (7%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLG 105
           +I ND    F+A +         + S + +++  + I  Y+  L    WP +      LG
Sbjct: 117 AINNDELAEFIASI---------LPSYDEVSKIRRMIRVYKSQLDVN-WPTITQVNFKLG 166

Query: 106 NSSVSVQRLRERLIISGDLDPS---KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            SS  VQRLR  L   GDL+ S   +     +D  V   +K FQ RHG+  SG +D ST 
Sbjct: 167 QSSKQVQRLRWMLTALGDLENSELTRYRESIYDPMVIHGIKAFQRRHGIRVSGELDESTA 226

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             +N+    R+ Q+Q NL R   ++      +Y+ +NIP  SL+    G++ L   VIVG
Sbjct: 227 LVLNISPQRRVIQMQQNLWRWL-MMPPSPPKKYIKINIPDYSLQLFVLGELDLSMKVIVG 285

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +    TP++ +R+ R+  NPYW  P SII+ +++ L   +P YL      +      E+ 
Sbjct: 286 KPSSPTPVMMTRVTRMTINPYWTPPSSIIRSELLPLNSTEPGYLNHKGFELHAVGKNEIS 345

Query: 283 VEEVDWNSPEP-----PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           V ++    P+        +   Q PGK NA+   +    +  + Y+HDTP   LF+    
Sbjct: 346 VVKLTNMEPKQLKGLLTEYRLVQAPGKDNALGQVRFTIPNTQSIYLHDTPAKNLFDGEHL 405

Query: 338 FETSGCVRVRNIIDLDVWLL---KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
             + GC+R+   + L  +L+   +D+       I+  +   KT  V L   +P+   Y +
Sbjct: 406 ALSHGCIRLEKALALSEYLISIHEDSK-----EIQVALSGSKTRYVSLPDPMPIFITYQT 460

Query: 395 AWSPKDSIIQFRDDIYGLD 413
           AW      +Q R DIY LD
Sbjct: 461 AWVDNRGKLQLRPDIYHLD 479


>gi|167645745|ref|YP_001683408.1| peptidoglycan-binding domain-containing protein [Caulobacter sp.
           K31]
 gi|167348175|gb|ABZ70910.1| Peptidoglycan-binding domain 1 protein [Caulobacter sp. K31]
          Length = 500

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 157/341 (46%), Gaps = 19/341 (5%)

Query: 79  EKAIAFYQDILSRGGW-PELPIRPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDA 136
            K +  Y+DI +RGGW P     PL LG +    +  L+ RL    D       +  FD 
Sbjct: 166 RKGLTTYRDIAARGGWKPLAGGAPLKLGATGDPRIAALKVRLAAE-DATVVVDKAQVFDE 224

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            ++ A+   Q R GL+P G +  +TL A+NVPV+ RI Q+  N+ R +  L +++    +
Sbjct: 225 VLQQALMRAQKRFGLNPDGGLGPATLAALNVPVERRIDQILANMERWR-WLPRELPADRI 283

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            VNI AA +    +    L    + GR   +TP+L S I+ I+ NP W +P SI  K++ 
Sbjct: 284 QVNIAAAVMSVFHDDAPNLTMRAVTGRPGDETPMLQSTIHSIVLNPPWNVPSSIATKELW 343

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
              R  P YL  N+  +I        ++               Q  G   A+   K +F 
Sbjct: 344 PKERAHPGYLARNDFIVIPTGEGTSRLQ---------------QKAGPKAALGLVKFDFD 388

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP    F +  R  + GCVR+   I L   LL  +P W    +E  +   K
Sbjct: 389 NPYGVYLHDTPSRSKFESYSRLASHGCVRLEKPIPLAKQLLASSPDWQPDVVEATIAAGK 448

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           T    LA  + V  +Y +A+   D  + FRDD YG D V V
Sbjct: 449 TVRAPLAQPIAVFLLYWTAYMTPDGQMNFRDDPYGWDKVLV 489


>gi|238898896|ref|YP_002924578.1| hypothetical protein HDEF_1835 [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229466656|gb|ACQ68430.1| conserved hypothetical protein, YkuD and peptidoglycan binding
           domains [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 530

 Score =  152 bits (384), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 171/330 (51%), Gaps = 15/330 (4%)

Query: 94  WPELPIRP-LHLGNSS---VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           WP+L  R  L  G SS    +V+++  RL I G++  +   S  +   +  A+K FQ   
Sbjct: 202 WPKLTERVYLREGYSSKDISNVKKILYRLGI-GNMSLTDVDSQVYSHDLVMAIKQFQKNR 260

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK-KLLEQKMGLRYVLVNIPAASLEAV 208
           GL   G++   T   +NV   +  R L +N+ R++    + + G   +LVNIP  SL   
Sbjct: 261 GLPADGIIGIRTRNWLNVSPKILARLLALNMQRLRFTPADIQTG---ILVNIPDYSLNYY 317

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E GK+ L S VIVGR DR+TP++ S IN+I+ NP W +P S+ ++D++  + ++  YL++
Sbjct: 318 EEGKIRLFSKVIVGRPDRKTPVMQSAINQIVINPDWNVPHSLAREDILPQVIKNIDYLQE 377

Query: 269 NNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYM 323
           +N  ++    +   V   E +DW +    NF +  RQ  G  N +   K    +R + ++
Sbjct: 378 HNYRILSSWSQNAEVIDPESIDWENISIENFPYYLRQTLGPNNPLGHYKFNMPNRYSIFL 437

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   +F    R  +SGCVRV+   +L   LLK T   +   I   +K  K+T     
Sbjct: 438 HDTPNKAMFQRYRRAGSSGCVRVQKASELARLLLKKTGL-TDADILNFLKENKSTYRNTR 496

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             +PV   Y++AW  +D   QFR DIY  D
Sbjct: 497 KRIPVWLYYLTAWVSEDGATQFRTDIYHYD 526


>gi|94501826|ref|ZP_01308338.1| hypothetical protein RED65_14387 [Oceanobacter sp. RED65]
 gi|94426047|gb|EAT11043.1| hypothetical protein RED65_14387 [Oceanobacter sp. RED65]
          Length = 628

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 178/379 (46%), Gaps = 41/379 (10%)

Query: 85  YQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGD-----------------LDP 126
           YQDI   G W  L I  PL  G+    + RL+  L   GD                 LDP
Sbjct: 255 YQDIAESGLWYPLEIENPLKAGDHHAQIPRLKWMLNAYGDYQKSAMDWLVSQTPNSELDP 314

Query: 127 ----------SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
                      +      D     A+K +Q R+GL P+G +D  TL  +N P     +++
Sbjct: 315 LALERQYRKQPEHQVYRIDENTVRALKHYQKRNGLLPTGRLDQQTLAQLNEPPYFIAQRI 374

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
            +N+ R +  L +++G  Y+LVN+    L     GK  L   VI+G+   +TP+L   I+
Sbjct: 375 ALNMKRWR-YLPKELGEDYILVNMADFRLNYFAKGKRQLNMKVIIGKEHLRTPVLAETIS 433

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEP 293
            ++  P W +P  I  +D++   ++DP YL+ +N  + +      KEV +E +D+N  + 
Sbjct: 434 SVILAPEWNVPHRIAIRDIIPQAKRDPDYLRKHNFKVYEGWSMPPKEVPLENLDFNGFQS 493

Query: 294 PNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +R  Q PG  N++ + K  F +  + Y+HDT    LF   +R  +SGC+RV   + 
Sbjct: 494 RTNTYRLVQAPGDDNSLGNVKFVFPNDKSIYLHDTNHKELFARDMRALSSGCIRVEQPMA 553

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL     W    I  V++ R T PV+L   VPV+ +Y + W  ++  +Q R D+Y 
Sbjct: 554 LAKALL-GRQNWDEQLISNVIERRYTRPVRLKDPVPVYLMYWTTWVNEEGTLQVRRDVYN 612

Query: 412 LDNVHVGIIPLPEDHPIDS 430
            D ++       + H +DS
Sbjct: 613 RDQIN------NQSHKLDS 625


>gi|320109078|ref|YP_004184668.1| ErfK/YbiS/YcfS/YnhG family protein [Terriglobus saanensis SP1PR4]
 gi|319927599|gb|ADV84674.1| ErfK/YbiS/YcfS/YnhG family protein [Terriglobus saanensis SP1PR4]
          Length = 569

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 168/347 (48%), Gaps = 17/347 (4%)

Query: 78  TEKAIAFYQDILSRGGWPELPI---RPLHLGNSSVSVQRLRERLIISGDLD--PSKGLSV 132
           T+ AI  Y  +L +     +P+   + +  G      Q L  RL + GDLD  P    + 
Sbjct: 203 TKAAIVHYVGLLPQDHTSPVPMVTGKSIEPGKPWAGSQALSGRLALFGDLDNVPDTVSAS 262

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +D  +  A+K FQ RHG++  G +   T+ A+N P+ +RI QL   L R + L ++   
Sbjct: 263 TYDPQLTDALKKFQHRHGIEEDGKIGKDTVNALNTPLGVRINQLTDTLERWRWLSDEYQN 322

Query: 193 LRYVLVNIPAASLEAVENG---KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
              ++VN+P  +L A  +G   +  +R  V     + +TP++   +  ++F P+W +P S
Sbjct: 323 AA-IMVNLPEYTLRAFSDGHHEEFSMRVVVGQSVKEHRTPVITDHMKYLVFRPFWNVPPS 381

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNFIFRQDPGKINA 307
           I++ ++   +R    YL  +N   +D KG  V    E+V          I R+ PG  N+
Sbjct: 382 IMKAEIAPHMRASSGYLASHNFETVDNKGNPVSASAEQV-----ARAGVIVREKPGPKNS 436

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F +  N Y+H TP   LF+   R  + GCVR++    L  W+L+D   W+   
Sbjct: 437 LGLVKFLFPNTFNVYLHSTPATELFSRSKRDFSHGCVRLQEPEKLAAWVLRDNSKWNDDS 496

Query: 368 IEEVVKT-RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I E ++  +    V L+  +P+   Y +A+  +D  + F  DIYG D
Sbjct: 497 IHEAMENGQDNKTVLLSHPIPIVIFYATAYPGEDGDMHFFTDIYGYD 543


>gi|304415070|ref|ZP_07395810.1| peptidoglycan binding domain-containing hypothetical protein
           [Candidatus Regiella insecticola LSR1]
 gi|304283074|gb|EFL91497.1| peptidoglycan binding domain-containing hypothetical protein
           [Candidatus Regiella insecticola LSR1]
          Length = 421

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 149/296 (50%), Gaps = 10/296 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P   +   ++  + +AVK FQ   GL P G++ + T + +N+    R   L +N+ R++ 
Sbjct: 121 PPPSVDTLYNPALVAAVKRFQQAQGLTPDGIIGTGTRKWLNLSPQKRATLLALNMQRLRI 180

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  + K G   ++VNI   SL   + G   L S VIVGR  R+TP + S ++ ++ NP W
Sbjct: 181 LPADMKTG---IMVNIADYSLHYYQEGNEILSSAVIVGRPSRKTPFMSSALSNVVINPQW 237

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPPNFIF--R 299
            +P S+++ D++  ++ D  YLK +   ++   +   K +    ++W+     NF +  R
Sbjct: 238 KVPTSMVKNDILPKVKYDATYLKQHGYTILTNWNNNAKIIDPSTINWHLISANNFPYRLR 297

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K    S ++ Y+HDTP   LF       +SGCVRV     L   LLKD
Sbjct: 298 QAPGTNNSLGRYKFNMPSSDSIYLHDTPNHRLFQKETLALSSGCVRVHKAAILAKMLLKD 357

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              W    +   +K   TT V +   +PV   Y+++W  K+  +QFR DIY  D  
Sbjct: 358 A-GWDDTRLSNTLKQGNTTYVNIRQHLPVLLYYLTSWVDKEGKVQFRTDIYNYDTA 412


>gi|297578860|ref|ZP_06940788.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297536454|gb|EFH75287.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 524

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 155/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 234 YDASLEKPIKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 293

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 294 --IVVNVPGFDMKYWDAGREVFEAKVMVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++ + +I        ++   +DW + EP  F +  RQ  G  NA+ 
Sbjct: 352 DILPMVKRDSEYLANHRMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALG 411

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 472 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|262169418|ref|ZP_06037110.1| L,D-transpeptidase YcbB [Vibrio cholerae RC27]
 gi|262022231|gb|EEY40940.1| L,D-transpeptidase YcbB [Vibrio cholerae RC27]
          Length = 523

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 156/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 233 YDASLEKPIKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 292

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 293 --IVVNVPGFDMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 350

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++++ +I        ++   +DW + +P  F +  RQ  G  NA+ 
Sbjct: 351 DILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWETVDPATFPYRLRQQAGVQNALG 410

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 411 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 470

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 471 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 512


>gi|121729970|ref|ZP_01682389.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147674156|ref|YP_001216833.1| hypothetical protein VC0395_A0887 [Vibrio cholerae O395]
 gi|121628291|gb|EAX60802.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|146316039|gb|ABQ20578.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227013185|gb|ACP09395.1| conserved hypothetical protein [Vibrio cholerae O395]
          Length = 524

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 156/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 234 YDASLEKPIKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 293

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 294 --IVVNVPGFDMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++++ +I        ++   +DW + +P  F +  RQ  G  NA+ 
Sbjct: 352 DILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWETVDPATFPYRLRQQAGVQNALG 411

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 472 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|256425547|ref|YP_003126200.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256040455|gb|ACU63999.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 553

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 159/317 (50%), Gaps = 5/317 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL   +++   Q L  RL+ SG LD S G S +  + ++  ++ FQ    +   G     
Sbjct: 233 PLTYTDTAGYRQLLINRLVQSGHLDTSGGHS-SDTSLLKKGIRAFQKEFNMYEDGQAGKK 291

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ MN        Q+ +N+ R +KL +  +  RY++VN+P   +E V++G V + S VI
Sbjct: 292 TIQTMNKTFADWEVQVALNMDRWRKLPD-TLPQRYIMVNVPGYRMELVDSGTVAVTSKVI 350

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG    +TP+L+SR+   +  PYW +P SI  K+M+  +++D  YL   N+ +ID  G  
Sbjct: 351 VGAPRTRTPLLNSRMTNFVMYPYWRVPFSITIKEMLPAIQRDRAYLAKKNLEIIDSHGNA 410

Query: 281 VFVEEVDWNSPEPPNF--IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           +  + V W+      F  + RQ  G  N++   K  F ++   Y+HDT    LF N  R 
Sbjct: 411 ISPDSVKWSKLSKNYFPYVLRQMDGIENSLGIMKFNFMNKYAVYLHDTNARGLFANSYRA 470

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GCVRV+    L ++L KD     R  +   +       + +   VP++F Y +A   
Sbjct: 471 LSHGCVRVQQWDSLSMYLTKDDTRHPRDSMRRWLANGDKKQIDIQHSVPIYFRYFTA-EG 529

Query: 399 KDSIIQFRDDIYGLDNV 415
           +D  +   +DIYG D +
Sbjct: 530 RDGRLVLHEDIYGEDRI 546


>gi|227356807|ref|ZP_03841192.1| peptidoglycan binding domain protein [Proteus mirabilis ATCC 29906]
 gi|227163097|gb|EEI48032.1| peptidoglycan binding domain protein [Proteus mirabilis ATCC 29906]
          Length = 571

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 144/285 (50%), Gaps = 8/285 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  + +AVK FQ  HGL+  G++   T   +N+    R   + +N+ R++  L   +G 
Sbjct: 273 YDEPLIAAVKSFQAAHGLETDGIIGRQTRNWLNMTPIQRAGIMALNIQRLR--LTPPIGD 330

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             + VNIP  SL    N ++ L S VIVGR DR+TPI+ S +N ++ NP W +P S+ +K
Sbjct: 331 TGIWVNIPDYSLYFYANNQLILDSKVIVGRPDRKTPIMSSALNNVVVNPPWNVPTSMTRK 390

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVF---VEEVDWNSPEPPNFIFR--QDPGKINAM 308
           D++   + DP Y       +    G + +     ++DW +    NF +R  Q PG  N++
Sbjct: 391 DIVPKGKADPSYFSRKGYTIYSGWGNDAYPINPYDIDWENISAANFPYRIWQAPGPTNSL 450

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    +    Y+HDTP   LF   +R  +SGC+RV     L   LL D   W +  I
Sbjct: 451 GRYKFNMPNSEAIYLHDTPNHNLFTKNMRAISSGCIRVNKAAQLATILLGDA-GWKQDRI 509

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +  +K   T    +   +PV+  Y +AW  +++  Q+R DIY  D
Sbjct: 510 DAALKRGSTQYAPIPERIPVYLYYQTAWVAEENAPQYRADIYNYD 554


>gi|229521381|ref|ZP_04410800.1| hypothetical protein VIF_001911 [Vibrio cholerae TM 11079-80]
 gi|229341479|gb|EEO06482.1| hypothetical protein VIF_001911 [Vibrio cholerae TM 11079-80]
          Length = 524

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 155/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 234 YDASLEKPIKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 293

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 294 --IVVNVPGFDMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++ + +I        ++   +DW + +P  F +  RQ  G  NA+ 
Sbjct: 352 DILPMVKRDSEYLANHRMEIIRGWSDPEVIDPALIDWETVDPETFPYRLRQQAGVQNALG 411

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 472 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|330722118|gb|EGH00028.1| L2CD-transpeptidase YcbB [gamma proteobacterium IMCC2047]
          Length = 439

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 203/426 (47%), Gaps = 28/426 (6%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           K  Y  FV L+L     LV KP+   V+ EI +E   S V     + L   D+      P
Sbjct: 2   KCRYAVFVALLL-----LVFKPVW--VMAEITDELLLSRVTA--PDLLPFQDIQPQLLQP 52

Query: 69  --IISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLD 125
               SK++      A+  Y++I + G W      PL   G+    V +L+  L   GDL 
Sbjct: 53  YQAASKQSFESLADAVLTYENIQNNGRWRTFSAGPLLRQGDRHPQVSQLKAHLQWLGDLP 112

Query: 126 PSKGLSVA---FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           P   LS+    FD  +  A+  FQ RH +   G++   T   +NVP   RI QL +N+ R
Sbjct: 113 PQDILSLGSRLFDRALHQALLRFQARHSVKADGVLGPKTRALLNVPPWQRIDQLVLNMYR 172

Query: 183 IKKLLEQKMGLR---YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
                +Q+  +    Y+ +N+P  +L   + G+V L    +VG+  RQTP   + + +++
Sbjct: 173 -----QQQNEINDDVYLHINLPEYNLRFYQFGEVLLEMRAVVGKRTRQTPEFSAAVTKLI 227

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE---KGKEVFVEEVDWNS--PEPP 294
            NP W +P+SI  +D++  L  DP++L+  N+ ++        EV   +VD++       
Sbjct: 228 INPDWNVPKSIAYRDILPKLHNDPEFLRKRNLRVVSGWQLPRVEVPEHQVDFDRMYQGAE 287

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
            + F + PG+ N +   K +  S N+ Y+HDT +  LF+   R  +SGC+R+ +   L  
Sbjct: 288 YYRFWEPPGETNTLGRMKFQLDSDNSIYLHDTQQKNLFDAESRAFSSGCIRLESPRALAD 347

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L++    W+   ++ +        +++   + VH  Y +AW  K  ++ F +D+Y  D+
Sbjct: 348 TLMRVANQWTPEVLDPLFDGPDMIKLRVGKNILVHVTYWTAWLDKRGVLHFANDMYERDS 407

Query: 415 VHVGII 420
           V   ++
Sbjct: 408 VDFAVM 413


>gi|153829587|ref|ZP_01982254.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|229515643|ref|ZP_04405102.1| hypothetical protein VCB_003301 [Vibrio cholerae TMA 21]
 gi|148874921|gb|EDL73056.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|229347412|gb|EEO12372.1| hypothetical protein VCB_003301 [Vibrio cholerae TMA 21]
          Length = 524

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 154/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +E  +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 234 YDTSLEKPIKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 293

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 294 --IVVNVPGFDMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++ + +I        ++   +DW + EP  F +  RQ  G  NA+ 
Sbjct: 352 DILPMVKRDSEYLANHRMEIIRGWSDPEVIDPALIDWETVEPETFPYRLRQQAGVQNALG 411

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 472 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|15641281|ref|NP_230913.1| hypothetical protein VC1268 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|227081440|ref|YP_002809991.1| hypothetical protein VCM66_1223 [Vibrio cholerae M66-2]
 gi|229505145|ref|ZP_04394655.1| hypothetical protein VCF_000353 [Vibrio cholerae BX 330286]
 gi|229511183|ref|ZP_04400662.1| hypothetical protein VCE_002590 [Vibrio cholerae B33]
 gi|229518302|ref|ZP_04407746.1| hypothetical protein VCC_002326 [Vibrio cholerae RC9]
 gi|229608165|ref|YP_002878813.1| hypothetical protein VCD_003083 [Vibrio cholerae MJ-1236]
 gi|298498640|ref|ZP_07008447.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9655753|gb|AAF94427.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|227009328|gb|ACP05540.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|229345017|gb|EEO09991.1| hypothetical protein VCC_002326 [Vibrio cholerae RC9]
 gi|229351148|gb|EEO16089.1| hypothetical protein VCE_002590 [Vibrio cholerae B33]
 gi|229357368|gb|EEO22285.1| hypothetical protein VCF_000353 [Vibrio cholerae BX 330286]
 gi|229370820|gb|ACQ61243.1| hypothetical protein VCD_003083 [Vibrio cholerae MJ-1236]
 gi|297542973|gb|EFH79023.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 524

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 155/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL   G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 234 YDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 293

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    S V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 294 --IVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++++ +I        ++   +DW + EP  F +  RQ  G  NA+ 
Sbjct: 352 DILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALG 411

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 472 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|254848392|ref|ZP_05237742.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255745664|ref|ZP_05419612.1| L,D-transpeptidase YcbB [Vibrio cholera CIRS 101]
 gi|262159059|ref|ZP_06030171.1| L,D-transpeptidase YcbB [Vibrio cholerae INDRE 91/1]
 gi|254844097|gb|EET22511.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255736739|gb|EET92136.1| L,D-transpeptidase YcbB [Vibrio cholera CIRS 101]
 gi|262029244|gb|EEY47896.1| L,D-transpeptidase YcbB [Vibrio cholerae INDRE 91/1]
          Length = 523

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 155/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL   G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 233 YDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 292

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    S V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 293 --IVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 350

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++++ +I        ++   +DW + EP  F +  RQ  G  NA+ 
Sbjct: 351 DILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALG 410

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 411 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 470

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 471 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 512


>gi|261211004|ref|ZP_05925294.1| hypothetical protein VCJ_001260 [Vibrio sp. RC341]
 gi|260839979|gb|EEX66579.1| hypothetical protein VCJ_001260 [Vibrio sp. RC341]
          Length = 522

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 162/309 (52%), Gaps = 13/309 (4%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           LR   +++ D+   +     +D  +  A+K FQ  HGL   G++   T++ +N  V  R+
Sbjct: 212 LRRLSLVNLDITDVREDVAFYDQSLVKAIKQFQSMHGLKTDGVIGPETIKWLNKSVTERV 271

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
             L +N  R++  L Q      ++VN+P   ++  + G+    + V+VGRV R TP++++
Sbjct: 272 TLLALNAERLR--LWQTPQDTVIVVNVPGFDMKYWDAGREVFEAKVVVGRVTRPTPVMNT 329

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSP 291
           +++ ++ NP W +PR I+ +D++ ++++D QYL ++ I +I        V  +E+DW + 
Sbjct: 330 KLDSLIINPTWNVPRKIMVEDILPMVKRDHQYLAEHQIEIIRGWSDPEVVDPQEIDWATV 389

Query: 292 EPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
           +P  F +  RQ  G  NA+   K    +    Y+HDTP   LFNN  R  +SGC+RV N 
Sbjct: 390 DPETFPYRLRQQAGVQNALGMYKFNTPNSRAIYLHDTPSKHLFNNAARAFSSGCIRVENA 449

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
                 LL          + +V  T KT  + L   +PV  +Y + W  +  ++ +RDDI
Sbjct: 450 QKFAQALLDQQGI----VLNDVPDTTKT--IALKKRIPVQIIYQTVWY-EGGVLNYRDDI 502

Query: 410 YGLDNVHVG 418
           Y  D++ +G
Sbjct: 503 YRYDSLALG 511


>gi|153823871|ref|ZP_01976538.1| putative peptidoglycan binding domain protein [Vibrio cholerae B33]
 gi|126518613|gb|EAZ75836.1| putative peptidoglycan binding domain protein [Vibrio cholerae B33]
          Length = 519

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 155/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL   G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 233 YDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 292

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    S V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 293 --IVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 350

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++++ +I        ++   +DW + EP  F +  RQ  G  NA+ 
Sbjct: 351 DILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALG 410

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 411 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 470

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 471 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 512


>gi|34558804|gb|AAQ75149.1| conserved hypothetical protein [Alvinella pompejana epibiont 6C6]
          Length = 559

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 169/328 (51%), Gaps = 20/328 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG--LSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           L  G+    + +++ERL + GD     G   S  FD  ++SA+  ++ R  L+ +G++D 
Sbjct: 211 LKFGDVDRKIAKIKERLAMEGDYPKESGAIYSDIFDEKLKSAIYRYKERFNLEQNGIIDK 270

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T+  MN P+ L I  +  NL ++K +   K    +++VNIP  +++  ++G   L  + 
Sbjct: 271 VTIYYMNKPISLLIDSIITNLDKLK-VSPNKFPDEFIMVNIPDFTMDYYKDGISNLHMSA 329

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--EK 277
           +VGR  R TPI HS++  +  NP W IP ++++KD++  L ++P Y++ +NIH+    + 
Sbjct: 330 VVGRDKRPTPIFHSKMTYLELNPNWNIPENLVRKDLIPTLIEEPDYMEKHNIHVFYGWKD 389

Query: 278 GKEV----------FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
            KE+          +++E + + P    + F Q PG  NA+   K  F ++ + Y+HDT 
Sbjct: 390 KKEIKNLDINKLTRYLDEKNGHIP----YRFVQYPGDDNALGRIKFMFPNKYSVYLHDTD 445

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
              LF    R  +SGC+R+     L   L     +     I+   +T K   ++    +P
Sbjct: 446 NKSLFERRYRVYSSGCMRISKPFQLLEALKPHLKSSDIAQIDRYRQTLKNKIMRFTKSLP 505

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           V+  Y + +  +D ++ FR DIYG D +
Sbjct: 506 VYTTYFTVFK-RDGMVFFRKDIYGYDKM 532


>gi|89073969|ref|ZP_01160475.1| hypothetical protein SKA34_15405 [Photobacterium sp. SKA34]
 gi|89050297|gb|EAR55801.1| hypothetical protein SKA34_15405 [Photobacterium sp. SKA34]
          Length = 579

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 151/280 (53%), Gaps = 11/280 (3%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYVLVN 199
           AVK FQ RHGL   G++ + T + + + +  RIR L +N  R++   ++   G   ++VN
Sbjct: 289 AVKRFQERHGLKNDGVIGTQTQQWLALNIKERIRLLALNAQRMRLWSVKPDTG---IVVN 345

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP+  +     G+  L S VIVGR  R TP++ S I  ++FNPYW +P SI++KD+M  +
Sbjct: 346 IPSFYMNLWLEGEKVLGSKVIVGRPSRHTPMIDSDIQSVVFNPYWNVPNSIMKKDIMPKV 405

Query: 260 RQDPQYLKDNNIHMID--EKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
           R++  YL ++N  +I   +  +++ +  + ++   P  F +  RQ PGK NA+   K  F
Sbjct: 406 RRNRNYLANHNYEVIKGWDNAQKIAINSIPYHLLSPNRFPYRLRQKPGKRNALGLYKFNF 465

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +    Y+HDT    LF    R  +SGC+RV     L   LL+ + + S    + + ++R
Sbjct: 466 PNNQAIYLHDTASRSLFKKNERALSSGCIRVEQAKSLARVLLEYSGS-SEQRFDSLSRSR 524

Query: 376 KTTPVKLA--TEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           KT  + L     VPV  +Y +AW     ++ +R DIY  D
Sbjct: 525 KTRTIVLGDNKSVPVDLIYQTAWVDDSGLVHYRSDIYQYD 564


>gi|84503420|ref|ZP_01001480.1| peptidoglycan binding protein, putative [Oceanicola batsensis
           HTCC2597]
 gi|84388207|gb|EAQ01159.1| peptidoglycan binding protein, putative [Oceanicola batsensis
           HTCC2597]
          Length = 539

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 171/331 (51%), Gaps = 9/331 (2%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           I S G    +  + L  G++  +V  LR RL+  G L   + + V +D  +ESAV  FQ 
Sbjct: 196 IASGGFGATVQAQSLEPGDTGEAVVALRNRLMTMGYL--PRRVGVTYDRDMESAVLRFQA 253

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
            HGL   G+  ++T+  +NVPV+ R++ + V + R ++ + + +G R+VLVN+       
Sbjct: 254 DHGLSEDGVAGTATIAEINVPVEERLKSVIVAMER-ERWINRDLGDRHVLVNLTDFHARI 312

Query: 208 VENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
           +ENGK+  ++  ++G+     +TP     +  ++ NP W +PRSI   + +   +++P  
Sbjct: 313 MENGKIYFKTRSVIGKNLSTHRTPEFSDVMEHMIVNPTWNVPRSIAVSEYLPAFKRNP-- 370

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYM 323
             ++++ +ID +G+ V    V++ +    NF F  +Q P   NA+   K  F + +N Y+
Sbjct: 371 YSNSHLKLIDARGRVVDRGSVNFAAYSKRNFPFDLKQPPSSRNALGLVKFMFPNVHNIYL 430

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF+  VR  + GC+R+    +    LL              + T + T + LA
Sbjct: 431 HDTPAKSLFSRDVRAFSHGCIRLNEPFEFAHALLAWQSDDPEGLFRSTLNTGRETKIDLA 490

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + +PVH +Y +A S     + +R D+YG D 
Sbjct: 491 SPLPVHLIYRTAMSQPKGQMSYRRDVYGRDG 521


>gi|163759200|ref|ZP_02166286.1| hypothetical protein HPDFL43_05530 [Hoeflea phototrophica DFL-43]
 gi|162283604|gb|EDQ33889.1| hypothetical protein HPDFL43_05530 [Hoeflea phototrophica DFL-43]
          Length = 125

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/119 (52%), Positives = 91/119 (76%)

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
           +FRQDPGK NAM+STKI F++ +  YMHDTP+  +FN ++RFE+SGCVRV+N+ DL+ WL
Sbjct: 1   MFRQDPGKGNAMSSTKINFHNPHAVYMHDTPQQGVFNQLMRFESSGCVRVQNVRDLNTWL 60

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           L+DTP W+R  IE  + + ++T + L+  VPV+F Y +AW+ +D ++QFRDD+Y  D V
Sbjct: 61  LRDTPGWNRQAIEATIASGESTEILLSEPVPVYFTYFTAWASEDGVVQFRDDVYQRDGV 119


>gi|86357997|ref|YP_469889.1| hypothetical protein RHE_CH02382 [Rhizobium etli CFN 42]
 gi|86282099|gb|ABC91162.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 633

 Score =  150 bits (379), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 155/323 (47%), Gaps = 18/323 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA---------VKLFQMRHGLD 152
           L  G SS  +  + + L   G        +  F AY  S+         V+ FQ  HGL 
Sbjct: 300 LKPGESSSEIANIVKALQKHGSETLKTDHAATFAAYAGSSDYSPDIVSLVEDFQKEHGLK 359

Query: 153 PSGMVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           P G++  +T+ AM        +I +L V + +++ L E  +G RYV++N PA       +
Sbjct: 360 PDGVIGQATVRAMTGGDTNTSKIDKLVVAMEQVRWLPED-LGSRYVMINQPAYMAYYHND 418

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           GK  L   V+VG  + QT   +  I  + FNP+W +P+SII  +M+  LR DP YL D  
Sbjct: 419 GKEQLSMRVVVGGKNNQTYFFNDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYL-DQL 477

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
            + ++  G  V    VDW      N   RQ P   NA+   KI F + +  YMHDTP   
Sbjct: 478 GYEVEVNGHAVASSSVDWYG-STANVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKS 536

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
            F   +R  + GCVR+ N   +   +L  T       +   + + +   VK+  ++PV+ 
Sbjct: 537 FFKRDMRALSHGCVRLANPRAMAAAVLGTTAD----DVARQIASGQNHAVKVPQKIPVYV 592

Query: 391 VYISAWSPKDSIIQFRDDIYGLD 413
            Y +AW  KD ++++ DD+YG D
Sbjct: 593 SYFTAWPNKDGVVEYFDDVYGRD 615


>gi|319957846|ref|YP_004169109.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
           16511]
 gi|319420250|gb|ADV47360.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
           16511]
          Length = 575

 Score =  150 bits (378), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 162/324 (50%), Gaps = 10/324 (3%)

Query: 80  KAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           K +A      +   +P+L   R L + ++   + +++  L   GD          FD   
Sbjct: 199 KLLALLAKYRTMPNFPKLSYGRTLRINSTDSRIPQIKRMLKFFGDYPKHFAEDNQFDRPF 258

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
             A++ F+ R  L P   VD+  ++A+N      +R++ VNL ++K L   +    YV V
Sbjct: 259 AQAIRSFRSRFKLPPGNTVDNKVIQALNTTKKEYLRKILVNLEKLK-LYPHRWEPDYVEV 317

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           N+P   +    NG+    S V+VGR+DR TPI  S++  ++ NP W IP +++++D++ +
Sbjct: 318 NVPEFKMRFYRNGQPIFSSDVVVGRIDRPTPIFDSKMTYMVLNPTWTIPDNLVRRDLIPM 377

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDW-------NSPEPPNFIFRQDPGKINAMAST 311
           L+++P YL+ +NIH+           E+D+       +   P  + F Q P   NA+   
Sbjct: 378 LKKEPDYLQKHNIHVYTSYKPNAPEVELDFEKLFSYEHDTRPIPYRFVQFPSDQNALGRV 437

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID-LDVWLLKDTPTWSRYHIEE 370
           K  F ++ + Y+HDT    LF    R  +SGC+RV    D +D+ L      +S   I+E
Sbjct: 438 KFMFPNKYSVYLHDTDNKKLFGYRYRVFSSGCMRVAKPFDFMDLLLHYARGNYSEGKIQE 497

Query: 371 VVKTRKTTPVKLATEVPVHFVYIS 394
           ++ + K T ++L   +PVH VY +
Sbjct: 498 ILASNKPTTIRLKKAIPVHIVYFT 521


>gi|332288328|ref|YP_004419180.1| L,D-transpeptidase catalytic domain protein [Gallibacterium anatis
           UMN179]
 gi|330431224|gb|AEC16283.1| L,D-transpeptidase catalytic domain protein [Gallibacterium anatis
           UMN179]
          Length = 469

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 135/243 (55%), Gaps = 6/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L +NL R++ + + + G   + VNIP   L    NG+  L S VIVG+  R+TP++ 
Sbjct: 213 LAKLAINLQRLRFIPDFETG---IFVNIPTFQLHYYRNGEEILSSRVIVGKKARKTPVMM 269

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           S+++ I+ NP W  P  +I +D++  +R+DP Y+  N   +ID KG  +    +DW +  
Sbjct: 270 SKLSNIVVNPPWNAPVRLINEDLIPKVRKDPSYIYRNGYTIIDSKGNTIDPYTIDWENMT 329

Query: 293 PPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              F +  RQ PG  +A+ + K    S++  Y+HDTP   LFNN  R  +SGC+RV    
Sbjct: 330 AKRFPYRLRQAPGGDSALGNFKFNMPSKDAIYLHDTPNHRLFNNKNRAISSGCIRVNKSD 389

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           +L   LL +   WS     +V+K+RKTT V + +  PV+  Y++AW+     +    DIY
Sbjct: 390 ELATLLLTEA-GWSVDKKAQVLKSRKTTSVPIQSTNPVYLYYVTAWADAQGKVHTVADIY 448

Query: 411 GLD 413
           G D
Sbjct: 449 GYD 451


>gi|152990487|ref|YP_001356209.1| hypothetical protein NIS_0738 [Nitratiruptor sp. SB155-2]
 gi|151422348|dbj|BAF69852.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 492

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 172/338 (50%), Gaps = 14/338 (4%)

Query: 85  YQDILSRGGWPELPIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           Y++I  RGGW  + +      L  G     V +LR RL+  G L         +D  ++ 
Sbjct: 149 YENIKKRGGWGVITLSNDYAYLLPGKKYDEVVQLRWRLMQEGYLKDQNMTDTVYDENLKL 208

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AV+ FQ RH L P G+V  +TL+ +N  V+  I ++ +N+ R++  L++     YV VNI
Sbjct: 209 AVEEFQRRHFLKPDGIVGPTTLKVLNESVESIIEKILINIERLRWYLQEDKS--YVFVNI 266

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   L    +G +   S VIVGR +R TP++   I+  + NPYW  P++II +D++  L+
Sbjct: 267 PQFRLFLWHDGDMVFDSKVIVGRKERPTPLMRHEISYAVLNPYWRAPKTIIAQDILPKLK 326

Query: 261 QDP--QYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNF--IFRQDPGKINAMASTKIEF 315
                +  K+  I  +D    E    + + W++ +   F  +F Q PG  N +   K+ F
Sbjct: 327 AGKFEELEKEGIIASLDRYANETIPFDLIYWDAIDLSTFPIVFLQKPGPKNFLGFVKLMF 386

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            ++ + Y+HDT    LF    R  +SGCVRV   I+L   L++ T ++    I + +   
Sbjct: 387 PNKYDVYLHDTNARDLFRYSYRALSSGCVRVEKPIEL-FHLVEGTLSYR--EIFDRLWDH 443

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +T  V++  + PV+ +YI+     D  I F  DIY LD
Sbjct: 444 QTKKVRIHPKFPVYLMYITVMKEDDGNIYFYPDIYQLD 481


>gi|288941918|ref|YP_003444158.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
 gi|288897290|gb|ADC63126.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
          Length = 557

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 159/316 (50%), Gaps = 21/316 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L LG+    V +LRERL + G  +   P +     FDA +  AV+ FQ  HGL   G V 
Sbjct: 212 LSLGSRGERVAQLRERLRLLGYSERTPPDR--PETFDAALSEAVRAFQRGHGLGADGAVG 269

Query: 159 SSTLEAMNVPVD-LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             TL  +N PVD  RI ++++NL R++ L E  +   YV V++       V   ++   +
Sbjct: 270 PQTLAVINDPVDESRIERIRINLERMRWLYED-LPPDYVFVDVADYMAHLVRGREIAWST 328

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            VIVG+ D QTP+   R++ ++ NP W +P SI QK    +         D  I +    
Sbjct: 329 RVIVGKEDSQTPMFRDRLDHLVLNPTWTMPVSI-QKTFTKV--------SDKYILIDRRT 379

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           G+ V       N+ +   +   Q PG  NA+   K  F +R+  YMHDTP   LF    R
Sbjct: 380 GRRV----SGGNATDYKRYRVVQQPGPDNALGRVKFMFPNRHAVYMHDTPSKALFGRSAR 435

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             + GCVRV+N +     LL+++ +W R  I+ V++  KT  V L+  +PV   Y++A +
Sbjct: 436 ALSHGCVRVQNPMKFAELLLEES-SWDRARIDSVLEGAKTRYVNLSEPLPVLLYYLTARA 494

Query: 398 PKDSIIQFRDDIYGLD 413
             +  ++ R D+YG D
Sbjct: 495 DAEGNLRVRRDVYGRD 510


>gi|229525867|ref|ZP_04415272.1| hypothetical protein VCA_003512 [Vibrio cholerae bv. albensis
           VL426]
 gi|229339448|gb|EEO04465.1| hypothetical protein VCA_003512 [Vibrio cholerae bv. albensis
           VL426]
          Length = 524

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 154/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL   G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 234 YDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 293

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 294 --IVVNVPGFDMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++ + +I        ++   +DW + EP  F +  RQ  G  NA+ 
Sbjct: 352 DILPMVKRDSEYLANHRMEIIRGWSDPEVIDPALIDWETVEPETFPYRLRQQAGVQNALG 411

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 472 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|253688167|ref|YP_003017357.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251754745|gb|ACT12821.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 576

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 153/293 (52%), Gaps = 11/293 (3%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
           G ++     VE AVK FQ   GL+  G++   T + +NV   +R   L +N+ R++ L +
Sbjct: 273 GAAIYTGELVE-AVKRFQHWQGLEDDGVIGKRTRDWLNVSPQMRATLLALNIQRLRLLPD 331

Query: 189 Q-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G   ++VNIP  SL   ++G   L S VIVG+  R+TP++ S +  ++ NP W +P
Sbjct: 332 NVHTG---IMVNIPNYSLIYYQDGAERLSSRVIVGQPKRKTPLMSSSLYNVVVNPPWNVP 388

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWN--SPEPPNFIFRQDP 302
            ++I++D++  + +DP YL+ +   ++    ++  V     +DW   SPE   +  RQ P
Sbjct: 389 TTLIRQDIIPKVVRDPGYLQRHGYTVLSGWSQDAEVIDPSMIDWQIVSPERFPYRLRQAP 448

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    +    Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   
Sbjct: 449 GANNSLGRYKFNMPNSEAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELASMLLQDA-G 507

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           W+   I   +    TT V +   +PV+  Y++AW  +D   QFR DIY  D+ 
Sbjct: 508 WNNSRISSTLDQGNTTFVSMKHRIPVNLYYLTAWVAEDGRPQFRTDIYNYDDT 560


>gi|260363711|ref|ZP_05776495.1| putative amidase [Vibrio parahaemolyticus K5030]
 gi|260879722|ref|ZP_05892077.1| putative amidase [Vibrio parahaemolyticus AN-5034]
 gi|260898804|ref|ZP_05907245.1| putative amidase [Vibrio parahaemolyticus Peru-466]
 gi|260901617|ref|ZP_05910012.1| putative amidase [Vibrio parahaemolyticus AQ4037]
 gi|308086665|gb|EFO36360.1| putative amidase [Vibrio parahaemolyticus Peru-466]
 gi|308093310|gb|EFO43005.1| putative amidase [Vibrio parahaemolyticus AN-5034]
 gi|308108675|gb|EFO46215.1| putative amidase [Vibrio parahaemolyticus AQ4037]
 gi|308113388|gb|EFO50928.1| putative amidase [Vibrio parahaemolyticus K5030]
          Length = 513

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 178/377 (47%), Gaps = 21/377 (5%)

Query: 45  HSIVNDRFDNFLA--RVDMGIDSDIPIISKETIAQTEKAIAFY-QDILSRGGWPELPIRP 101
           + I   + D FLA  R  + +D+    +       ++    FY Q  LSR G P      
Sbjct: 149 NEITVGKLDQFLASLRSPLQMDASFNTVFASLSEFSQYQYPFYEQKGLSRVGDP------ 202

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             + N S  V+R+    I+  D+         +D  +E AVK FQ  HGL+  G++  +T
Sbjct: 203 --IENKSTLVERM---AIVGVDVSYIDSEIPQYDENLELAVKEFQRIHGLNQDGVIGPNT 257

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           +  +N     R+  L +N  R +   +++  +  V VN+P   +    +G+    S V+V
Sbjct: 258 IRWINFSPQQRLHLLALNAERSRIWAKERDNV--VFVNVPGYEVTYWHDGQPLFESKVVV 315

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           GR  R+TPI+   ++ ++ NP W +P  I+ KD++  ++++P YL ++NI +I       
Sbjct: 316 GRASRKTPIMTGTLDSVILNPTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSRE 375

Query: 282 FVE--EVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            ++   ++W +  P  F +  RQ  G  NA+   K    +    Y+HDTP   LF    R
Sbjct: 376 IIDPTTINWATVNPRTFPYRMRQASGSHNALGLYKFNMPNPQAIYLHDTPSKNLFQQDRR 435

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGCVRV N   L   L K      R   +       TT V L   +PVH +Y +AW 
Sbjct: 436 AFSSGCVRVENADQLAELLFKTQGLEERLEKKRESARSSTTSVPLGERIPVHIIYQTAWL 495

Query: 398 PKDSIIQFRDDIYGLDN 414
            ++  + +RDDIY  D+
Sbjct: 496 -EEGTLYYRDDIYKYDH 511


>gi|322832248|ref|YP_004212275.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
 gi|321167449|gb|ADW73148.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
          Length = 616

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 147/291 (50%), Gaps = 11/291 (3%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVN 199
           AVK FQ   GL+  G++   T + +N    LR   L +N+ R++ L      G   ++VN
Sbjct: 324 AVKRFQKWQGLEADGIIGGRTRQWLNASPQLRATLLALNIQRLRILPGNVNTG---IMVN 380

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP   L    NG   L S VIVGR  R+TP++ S +N ++ NP W +P +++++D++   
Sbjct: 381 IPNYQLTYYLNGNEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTTLVREDIVPKA 440

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIE 314
             +P Y + +   ++     +  V     +DW    P +F +  RQ PG  N++   K  
Sbjct: 441 MNNPGYFQQHGYQVLSGWSNDAEVIDPSMIDWAMISPNHFPYRIRQAPGVSNSLGRYKFN 500

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             S +  Y+HDTP   LF+  +R  +SGCVRV    +L   LL+D   W+   I   ++ 
Sbjct: 501 MPSSDAIYLHDTPNHNLFSKDIRALSSGCVRVNKASELANMLLQDA-GWNDTRISSALQG 559

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGIIPLPE 424
             TT V +   +PV   Y++AW   D   QFR DIY  D+ V  G   LP+
Sbjct: 560 GNTTYVAIRHHIPVKLFYLTAWVADDGKPQFRTDIYNYDSTVRSGAQILPQ 610


>gi|28898690|ref|NP_798295.1| putative amidase [Vibrio parahaemolyticus RIMD 2210633]
 gi|28806908|dbj|BAC60179.1| putative amidase [Vibrio parahaemolyticus RIMD 2210633]
          Length = 529

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 178/377 (47%), Gaps = 21/377 (5%)

Query: 45  HSIVNDRFDNFLA--RVDMGIDSDIPIISKETIAQTEKAIAFY-QDILSRGGWPELPIRP 101
           + I   + D FLA  R  + +D+    +       ++    FY Q  LSR G P      
Sbjct: 165 NEITVGKLDQFLASLRSPLQMDASFNTVFASLSEFSQYQYPFYEQKGLSRVGDP------ 218

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             + N S  V+R+    I+  D+         +D  +E AVK FQ  HGL+  G++  +T
Sbjct: 219 --IENKSTLVERM---AIVGVDVSYIDSEIPQYDENLELAVKEFQRIHGLNQDGVIGPNT 273

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           +  +N     R+  L +N  R +   +++  +  V VN+P   +    +G+    S V+V
Sbjct: 274 IRWINFSPQQRLHLLALNAERSRIWAKERDNV--VFVNVPGYEVTYWHDGQPLFESKVVV 331

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           GR  R+TPI+   ++ ++ NP W +P  I+ KD++  ++++P YL ++NI +I       
Sbjct: 332 GRASRKTPIMTGTLDSVILNPTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSRE 391

Query: 282 FVE--EVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            ++   ++W +  P  F +  RQ  G  NA+   K    +    Y+HDTP   LF    R
Sbjct: 392 IIDPTTINWATVNPRTFPYRMRQASGSHNALGLYKFNMPNPQAIYLHDTPSKNLFQQDRR 451

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGCVRV N   L   L K      R   +       TT V L   +PVH +Y +AW 
Sbjct: 452 AFSSGCVRVENADQLAELLFKTQGLEERLEKKRESARSSTTSVPLGERIPVHIIYQTAWL 511

Query: 398 PKDSIIQFRDDIYGLDN 414
            ++  + +RDDIY  D+
Sbjct: 512 -EEGTLYYRDDIYKYDH 527


>gi|153839457|ref|ZP_01992124.1| putative amidase [Vibrio parahaemolyticus AQ3810]
 gi|149747014|gb|EDM58002.1| putative amidase [Vibrio parahaemolyticus AQ3810]
          Length = 509

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 178/377 (47%), Gaps = 21/377 (5%)

Query: 45  HSIVNDRFDNFLA--RVDMGIDSDIPIISKETIAQTEKAIAFY-QDILSRGGWPELPIRP 101
           + I   + D FLA  R  + +D+    +       ++    FY Q  LSR G P      
Sbjct: 145 NEITVGKLDQFLASLRSPLQMDASFNTVFASLSEFSQYQYPFYEQKGLSRVGDP------ 198

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             + N S  V+R+    I+  D+         +D  +E AVK FQ  HGL+  G++  +T
Sbjct: 199 --IENKSTLVERM---AIVGVDVSYIDSEIPQYDENLELAVKEFQRIHGLNQDGVIGPNT 253

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           +  +N     R+  L +N  R +   +++  +  V VN+P   +    +G+    S V+V
Sbjct: 254 IRWINFSPQQRLHLLALNAERSRIWAKERDNV--VFVNVPGYEVTYWHDGQPLFESKVVV 311

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           GR  R+TPI+   ++ ++ NP W +P  I+ KD++  ++++P YL ++NI +I       
Sbjct: 312 GRASRKTPIMTGTLDSVILNPTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSRE 371

Query: 282 FVE--EVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            ++   ++W +  P  F +  RQ  G  NA+   K    +    Y+HDTP   LF    R
Sbjct: 372 IIDPTTINWATVNPRTFPYRMRQASGSHNALGLYKFNMPNPQAIYLHDTPSKNLFQQDRR 431

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGCVRV N   L   L K      R   +       TT V L   +PVH +Y +AW 
Sbjct: 432 AFSSGCVRVENADQLAELLFKTQGLEERLEKKRESARSSTTSVPLGERIPVHIIYQTAWL 491

Query: 398 PKDSIIQFRDDIYGLDN 414
            ++  + +RDDIY  D+
Sbjct: 492 -EEGTLYYRDDIYKYDH 507


>gi|120554149|ref|YP_958500.1| hypothetical protein Maqu_1223 [Marinobacter aquaeolei VT8]
 gi|120323998|gb|ABM18313.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
          Length = 318

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 146/269 (54%), Gaps = 7/269 (2%)

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           +  H L+  G+V   T  AMNVPV +RI Q++VNL R + +L  +    +VLV+I    +
Sbjct: 41  KQHHLLEEDGIVGRQTRAAMNVPVSVRIDQIRVNLERARWMLHGE-AEEFVLVDIAGYRI 99

Query: 206 EAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
                NG++  RS ++VG+  R+TP L S I  +  NP W +P +I  +DM+  +R+D  
Sbjct: 100 SYFRPNGEI-WRSRIVVGQPYRRTPSLRSMITHLTVNPTWTVPPTIFSEDMLPRIRRDIT 158

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           YL   N+ +++  G+ +    +DW +P     + RQDPG  NA+    + F + +  Y+H
Sbjct: 159 YLDRQNLSVLNFYGQWLDPNSIDWWNPG--GIMLRQDPGPTNALGQVVLRFPNNHLVYLH 216

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LF+  +R  +SGC+RV+ +++L   LL+DT T     I  V+   +T  + L  
Sbjct: 217 DTPSQGLFSRQLRAFSSGCIRVQGVLELAQLLLEDTDT--AADINSVIAEGETRNIHLKR 274

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            VPV   Y +     D  + FR D+Y  D
Sbjct: 275 SVPVILHYWTVHPGMDRELVFRPDVYQHD 303


>gi|255263285|ref|ZP_05342627.1| peptidoglycan-binding domain 1 protein [Thalassiobium sp. R2A62]
 gi|255105620|gb|EET48294.1| peptidoglycan-binding domain 1 protein [Thalassiobium sp. R2A62]
          Length = 533

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 166/333 (49%), Gaps = 9/333 (2%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + +L++GG+       L  G S   V  LR RLI  G L+ +   +  +DA +++AV+ F
Sbjct: 188 EQLLAQGGFGARVSGTLAPGTSGQQVVNLRNRLIAMGFLEGNA--TQTYDANIQAAVQRF 245

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q  HGL+  G     T+  +N   + R++ + V + R ++ + +  G R+V VN+   + 
Sbjct: 246 QTAHGLNADGSAGQGTVTELNKSAESRLQAVIVAMER-ERWINRPRGTRHVWVNLTDFTA 304

Query: 206 EAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
             ++N  V  ++  ++G  D  R++P     +  ++ NP W +PRSI  K+ +  L+ +P
Sbjct: 305 SIIDNDAVTFQTRSVIGANDSNRRSPEFSDVMEFMVINPSWYVPRSIATKEYLPRLQSNP 364

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNT 321
             +  +++ + D +G+ V    V+++      F F  RQ P + NA+   K  F ++ N 
Sbjct: 365 NAV--SHLEITDSRGRVVNRSSVNFSQYSARTFPFNMRQPPSRGNALGLVKFMFPNQYNI 422

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
           Y+HDTP   LF   VR  + GC+R+ +  D    LL           +  ++T     V 
Sbjct: 423 YLHDTPAKNLFGREVRAYSHGCIRLNDPFDFAYALLAKQTADPEGFFQAKLRTAAEARVN 482

Query: 382 LATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           L   VPVH VY +A++     + FR DIYG D 
Sbjct: 483 LNQPVPVHIVYRTAFTDVRGTLNFRRDIYGRDG 515


>gi|254226414|ref|ZP_04920001.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621036|gb|EAZ49383.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 524

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 154/290 (53%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +E  +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 234 YDTSLEKPIKQFQKMHGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 293

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 294 --IVVNVPGFDMKYWDVGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++ + +I        ++   +DW + +P  F +  RQ  G  NA+ 
Sbjct: 352 DILPMVKRDSEYLANHRMEIIRGWSDPEVIDPALIDWETVDPETFPYRLRQQAGVQNALG 411

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 472 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|241767412|ref|ZP_04765115.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax delafieldii 2AN]
 gi|241361827|gb|EER58083.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax delafieldii 2AN]
          Length = 322

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/292 (32%), Positives = 151/292 (51%), Gaps = 16/292 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK--KLLEQKM 191
           +D  +++ VK FQ RH L   G++   TL+A+ VP   R RQ+++ + R++   LL    
Sbjct: 12  YDEALQNGVKAFQERHALATDGVIGKGTLDALAVPPAARARQIELAMERLRWTPLLR--- 68

Query: 192 GLRYVLVNIPAASLEAVE--NGKVGLR--STVIVGR-VDRQTPILHSRINRIMFNPYWVI 246
           G R ++VNIP   L A E  NG+V L+    VIVG+ +D +TP+    +  I F+PYW +
Sbjct: 69  GPRMIVVNIPEFVLRAYEVHNGQVSLQLAMKVIVGKALDTRTPLFDEDMRFIEFSPYWNV 128

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFIFRQDPG 303
           P SI + + +  LR+DP Y     +  +   G+    +  E +D  +        RQ PG
Sbjct: 129 PPSIARSETIPRLRRDPGYFDQQGLEFVGANGQVHTALAAEHLD--AVLRGQMRIRQRPG 186

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             NA+   K  F + +N Y+H TP P LF    R  + GCVRV + + L  ++L++ P W
Sbjct: 187 PKNALGDIKFVFPNNSNIYLHHTPAPALFQRDRRDFSHGCVRVEDPVALAQFVLRNDPAW 246

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
               I E +   ++  ++LA  +PV   Y +A   K     F  D+YG D +
Sbjct: 247 PEPRIREAMARGQSATLRLAEPLPVVIAYSTAIV-KQGKPHFFADLYGQDKL 297


>gi|260776045|ref|ZP_05884940.1| hypothetical protein VIC_001429 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607268|gb|EEX33533.1| hypothetical protein VIC_001429 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 517

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 153/289 (52%), Gaps = 9/289 (3%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +E+AVK FQ  HGL   G++   T+  +N+    R+  L +N  R +    ++  +
Sbjct: 232 YDVTLETAVKQFQRLHGLTDDGIIGPDTIRWLNISPSERLSILALNAERGRLWPIERDTI 291

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++   +G+    S V+VGR  R TP++ ++++ ++ NP W +P  I+ +
Sbjct: 292 --IVVNVPGFEMKYWYSGQEVFESKVVVGRKGRPTPMMTTKLDSLILNPTWNVPWKIMVE 349

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNFIFR--QDPGKINAMA 309
           D++  +++DP+YL   NI ++ + G +  +  E++DW +  P  F +R  Q  G  NA+ 
Sbjct: 350 DIIPKVKEDPEYLVRQNITIVPKWGSKELINPEDIDWQNMRPSAFPYRMTQLSGNNNALG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    +R   Y+HDTP   LF+   R  +SGC+RV +       LL+          E
Sbjct: 410 LYKFNTPNRRAIYLHDTPSKNLFDEASRAFSSGCIRVEHADQFATRLLESQGLDMSTLDE 469

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           E +   K+ P+K    VPVH +Y +AWS +   I +RDDIY  D    G
Sbjct: 470 EELAANKSIPLK--QRVPVHIIYQTAWS-EGGKIHYRDDIYRWDRFSYG 515


>gi|197106129|ref|YP_002131506.1| peptidoglycan binding domain protein [Phenylobacterium zucineum
           HLK1]
 gi|196479549|gb|ACG79077.1| peptidoglycan binding domain protein [Phenylobacterium zucineum
           HLK1]
          Length = 510

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 159/337 (47%), Gaps = 18/337 (5%)

Query: 80  KAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           + +A Y++I + GGW  +P    + +G++   V  LR RL    D   +   S  FD  +
Sbjct: 174 RGLARYREIAAAGGWKTIPAGSSMAIGSTDPRVPALRARLAAE-DPQLTDLTSPTFDPAL 232

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
           + AV   Q R GL P G+V + TL  +N PV  RI Q+  NL R +  L   M    V V
Sbjct: 233 QEAVVRAQKRFGLKPDGVVGNGTLAFLNQPVGQRILQIIANLERWR-WLPATMPATRVQV 291

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           N  AA +    + K  L    + G+   +TP+L S I+ ++ NP W +P  I  +++   
Sbjct: 292 NSGAAIVTLFRDDKPVLSMKAVSGKPGDETPMLVSAIHSVVINPPWNVPTRIANEELWPK 351

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
            R+DP Y   N+  ++  +G    V+               Q PG   A+   K +F + 
Sbjct: 352 QRRDPGYFARNDYVVLPTEGGGSRVQ---------------QKPGPKAALGRFKFDFDNP 396

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
              Y+HDTP    F+   R  + GCVR+     L   LL   P W R  IE  + T KT 
Sbjct: 397 FTVYLHDTPSKGTFDLYARQASHGCVRLEKAQLLAEALLASDPKWGREGIEAQLATGKTL 456

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            V L+ +VPV+ +Y +A++  D  + FR D Y  D +
Sbjct: 457 RVSLSEQVPVYILYWTAFAGADGQMHFRADPYNWDRL 493


>gi|50121470|ref|YP_050637.1| hypothetical protein ECA2546 [Pectobacterium atrosepticum SCRI1043]
 gi|49611996|emb|CAG75445.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
          Length = 580

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 155/304 (50%), Gaps = 11/304 (3%)

Query: 120 ISGDLDPSKGLSVAFDAYVES---AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           ++G      G + A D Y      AVK FQ   GL+  G++   T + +NV   +R   L
Sbjct: 264 LTGQAPVVDGTTNADDRYTGELVDAVKRFQHWQGLEDDGVIGKRTRDWLNVSPQMRATLL 323

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
            +N+ R++ LL   +    ++VNIP  SL   ++G   L S VIVG+  R+TP++ S + 
Sbjct: 324 ALNIQRLR-LLPGNVHTG-IMVNIPNYSLIYYQDGAERLSSRVIVGQPKRKTPLMSSSLY 381

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWN--SP 291
            ++ NP W +P ++I++D++  + +DP YL  +   ++    ++  V     +DW   SP
Sbjct: 382 NVVVNPPWNVPTTLIRQDIIPKVVRDPGYLARHGYTVLSGWSQDAEVIDPSMIDWQVVSP 441

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
           E   +  RQ PG  N++   K    +    Y+HDTP   LF   +R  +SGCVRV    +
Sbjct: 442 ERFPYRLRQAPGANNSLGRYKFNMPNSEAIYLHDTPNHNLFQRDIRALSSGCVRVNKASE 501

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL+D   W+   I   +    TT V +   +PV+  Y++AW  +D   QFR DIY 
Sbjct: 502 LASMLLQDA-GWNNNRISSTLDQGNTTFVSMKHRIPVNLYYLTAWVAEDGRPQFRTDIYN 560

Query: 412 LDNV 415
            D+ 
Sbjct: 561 YDDT 564


>gi|298293068|ref|YP_003695007.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296929579|gb|ADH90388.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 678

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 166/331 (50%), Gaps = 13/331 (3%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           ++P  P L  G+S   V  LR RL I G  + ++     +D+++  AV+ FQ   GL P 
Sbjct: 341 QVPAGPMLRPGDSDPRVPLLRARLGIGGAPEDTE-----YDSFLADAVRDFQKLSGLKPD 395

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+V   TL A+N     ++  +  N+ R + +  Q   + YV+VNIP   +  V N +  
Sbjct: 396 GVVGRGTLAALNGAGGDQMPDIIANMERWRWVPHQVAPV-YVMVNIPEFMVRVVVNEQTV 454

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
             + V+VG+ D QTP++   +   +FNP W +P SII+ +M+  L  DP  L+   I ++
Sbjct: 455 HETRVVVGKPDTQTPLMSENMQYAVFNPSWNVPPSIIRNEMLPKLMADPYALERQGIDVV 514

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
              G+ V    +DW S     + FRQ+PG+ NA+   K  F +++  Y+HDTP   LF  
Sbjct: 515 -RNGRIVDPGAIDW-SRGATGYSFRQEPGERNALGRMKFMFPNKHAVYLHDTPSRSLFAR 572

Query: 335 VVRFETSGCVRVRNIIDLDVWLLK---DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
             R  + GCVRV   +     L         WS+  I ++V   + + V L    PVH V
Sbjct: 573 ERRAFSHGCVRVHEPLAFAEALFALGLPNEGWSQPRIAKLVGGNEKS-VTLKRRFPVHLV 631

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           Y + +   +  +  R+D+YG++     I+ L
Sbjct: 632 YFNTFVDGNGRLVSREDLYGINGATKAILGL 662


>gi|253990246|ref|YP_003041602.1| hypothetical protein PAU_02769 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781696|emb|CAQ84859.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 568

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 164/329 (49%), Gaps = 12/329 (3%)

Query: 94  WPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGL 151
           WP+L  +  L  G SS  V  LRE LI  G LD     S   +   + + V+ FQ   GL
Sbjct: 229 WPQLSDKGVLRPGQSSSDVTALREVLIRIGMLDELTTKSDNTYSPELVATVRNFQQWQGL 288

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAVEN 210
            P G++   T + +N     R   + +N+ R++ +      G   ++VNIP  SL+   N
Sbjct: 289 APDGVIGKRTRDWLNTSPQDRAGLMALNIQRLRIIPGHVSTG---IMVNIPDYSLQYYLN 345

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
            +  L S VIVGR  R+TPI+++ +N ++ NP W +P S+ +KD+      DP Y +   
Sbjct: 346 EQEVLNSKVIVGRPSRKTPIMNNVLNNVVINPPWSVPTSLARKDIAPRGVNDPGYFQRRG 405

Query: 271 IHMIDEKGKEVFVEE---VDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHD 325
             +      +  V +   +DWN   P NF +R  Q PG  N++   K    + +  Y+HD
Sbjct: 406 YVIFSSWRADASVIDPYTIDWNVVTPANFPYRIWQAPGPTNSLGRYKFNMPNSDAIYLHD 465

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
           TP   LF+  +R  +SGCVRV    +L   LL D   W++  +   +K   T  V +   
Sbjct: 466 TPNHGLFDKDIRAISSGCVRVNKASELASMLLGDA-GWNQNRVSNTLKQGNTAYVNIPQR 524

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +PV+  Y++AW  +  + Q+R DIY  DN
Sbjct: 525 IPVYLYYLTAWVDELGVAQYRTDIYDYDN 553


>gi|119899290|ref|YP_934503.1| hypothetical protein azo3000 [Azoarcus sp. BH72]
 gi|119671703|emb|CAL95616.1| putative periplasmic protein [Azoarcus sp. BH72]
          Length = 543

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 11/329 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P R L  G     +  L  RL + GDL     L   ++  +  AVK FQ+RHGL   
Sbjct: 195 PLPPRRKLEPGQPYAGLALLARRLTLLGDLVADVPLPPRYEGALVDAVKRFQLRHGLAAD 254

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIK--KLLEQKMGLRYVLVNIPAASLEAVE--N 210
           G+V   TL  + V    R+RQ+++ + R++   LL+     R ++VN+P   L A E  +
Sbjct: 255 GVVGRGTLAELEVAPAARVRQIELTMERLRWTPLLQAP---RMIVVNVPEFMLRAYEVRD 311

Query: 211 GK--VGLRSTVIVGR-VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           G+  V  R  VIVG+ +D +TP+    +  I F+PYW +P SI + +++  LR++P Y  
Sbjct: 312 GRIEVAARMKVIVGKALDTRTPLFAEDMRFIEFSPYWNVPPSIARAELVPRLRREPGYWN 371

Query: 268 DNNIHMIDEKG-KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
                 +   G     +     ++        RQ PG  NA+   K  F + +N Y+H T
Sbjct: 372 AQGFEFVAGDGTANPTLSTAGLDAVLRGTLRIRQRPGPHNALGDIKFVFPNNDNIYLHHT 431

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P P LF    R  + GC+RV   ++L  ++L+D P W    I E +    +  +++AT +
Sbjct: 432 PTPQLFARDRRDFSHGCIRVEAPVELARFVLRDQPEWDEARIREAMSAGSSKTIRVATPL 491

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           PV   Y +A    +    F  DIYG D +
Sbjct: 492 PVLIAYGTAMVDAEGHAHFFRDIYGHDQL 520


>gi|167624211|ref|YP_001674505.1| peptidoglycan-binding domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354233|gb|ABZ76846.1| Peptidoglycan-binding domain 1 protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 444

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 172/357 (48%), Gaps = 12/357 (3%)

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           + ++  + ++ ++ I    K I  Y+  L R  WP +    L LG  +  V +LR  L  
Sbjct: 84  LSVEQYLNLVERKDIQSLRKLIKHYRS-LERYQWPTVAPMELRLGLRTKEVAKLRWILTQ 142

Query: 121 SGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            GD+ P          FD  VE+ +KLFQ RHG    G + S TL ++N    +R+ QLQ
Sbjct: 143 VGDITPYSIPAYRESIFDPSVEAGLKLFQRRHGHAVDGKLGSQTLLSLNTEPSIRVAQLQ 202

Query: 178 VNL-MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
             L  R+K+  E K    YVLVN+   +L   +NG   L   VIVG+   +TP L++ I+
Sbjct: 203 NALKQRLKRFDEAK---DYVLVNLMDHTLRITKNGVEQLVMPVIVGKPTSKTPELNTTIS 259

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEVD--WNSPE 292
            I  NP W  P SII +D++  + + P YL++N+      + K +   V  +D      +
Sbjct: 260 VITVNPSWTPPASIIYQDILQSVDKQPNYLRNNDFAFKSNETKHIDHNVAGMDPKSLKNK 319

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
               +  Q PG  NA+   +    + +  ++HDTP   LF    R  + GC+R+      
Sbjct: 320 LKKSVLVQLPGTKNALGKYRFTIPNSDAIFLHDTPSKHLFKRQNRALSHGCIRLSQPALF 379

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
             +L+   P  +R   +  VK+++T   +L +++ +  +Y + W  KD  +Q R  I
Sbjct: 380 AQYLINKEPAETRLKFKNAVKSKQTRHFRLTSQLSIDVIYQTVWIDKDGSLQVRGTI 436


>gi|54309189|ref|YP_130209.1| amidase [Photobacterium profundum SS9]
 gi|46913621|emb|CAG20407.1| hypothetical amidase [Photobacterium profundum SS9]
          Length = 578

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 155/296 (52%), Gaps = 17/296 (5%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL--LEQKMGLRYVLV 198
           A+K FQ R+GL   G++ ++T   + +P     R++ VN+ R + +  ++ +    ++ V
Sbjct: 284 AIKRFQRRNGLADDGIIGAATTAQLVMPYTDIARRVAVNIQRFRNINVIDNQP---HIWV 340

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           NIP   L+  E G V   S VIVGR  R T +  S IN ++ NP W +P +I +KD++  
Sbjct: 341 NIPDYMLKIFEQGNVIFESKVIVGRTSRPTNLFSSAINTMVVNPTWNVPETIKRKDVIPK 400

Query: 259 LRQDPQYLKDNNIHMIDE--KGKEVFVEEVDWNSPEPPNF--IFRQDPGKINAMASTKIE 314
           ++    YL  +N+ +++      E+  +++DW+S  P  F   F+Q PG  N++   K  
Sbjct: 401 VKHSRDYLTAHNMRILNSWRDRTEIPADQIDWSSVNPKTFPHEFQQGPGPSNSLGRVKFL 460

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             +  + Y+HDTP   LFN   R  +SGCVRV    DL  +++      +      ++K 
Sbjct: 461 MPNDYSIYLHDTPARGLFNKTKRNLSSGCVRVEKAYDLANFIIDFQKRKNIESFNAMLKD 520

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPIDS 430
                V+L+  + V FVY++AW  + + +Q R+DIYG D+        P+   IDS
Sbjct: 521 GDLDTVRLSQRLGVDFVYLTAWIDEKNTLQMREDIYGYDS--------PQKEAIDS 568


>gi|157961829|ref|YP_001501863.1| peptidoglycan-binding domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157846829|gb|ABV87328.1| Peptidoglycan-binding domain 1 protein [Shewanella pealeana ATCC
           700345]
          Length = 434

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 178/361 (49%), Gaps = 18/361 (4%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERL 118
           + +  +  + +I ++ IA   + I  Y+  L R  WP +    L LG     V +LR  L
Sbjct: 81  LSLSTEQYLKLIKRKDIASYRRLIKQYK-ALDRFQWPMINPIELRLGLRVKEVAKLRWVL 139

Query: 119 IISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           +  GD++P   +      +D  VE+ +K FQ+RHGL   G + + TL ++N     R+ Q
Sbjct: 140 VKLGDMEPHTIAAYRESIYDPSVEAGLKRFQIRHGLSVDGKLGNQTLLSINTKPSFRVVQ 199

Query: 176 LQVNL-MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           LQ  L + +KK  E++    YV VN+   +L   +NG   L+  VIVG+   +TP L++ 
Sbjct: 200 LQKALKLSLKKFDEEQ---EYVFVNLTDYTLRISKNGVEQLKMPVIVGKPSSKTPELNTV 256

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ +  NP W  P SII +D+M  + + P YL++NN  +   K  +  +E+ +    +  
Sbjct: 257 VSVVTINPTWTPPASIIYQDIMKSVDEHPNYLRNNNFVL---KSYKTGIEDSNLAGMDTA 313

Query: 295 NFIFR-------QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
               +       Q  G  NA+   +    + +  ++HDTP   LF    R  + GC+R+ 
Sbjct: 314 ILKHKLKTSTLVQRSGDKNALGKFRFTIPNTSAIFLHDTPNKYLFKRANRALSHGCIRLS 373

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
                  +L+   P  +++  ++ +KT KT   +L + +P++ +Y + W  KD  +Q R+
Sbjct: 374 EPERFAHYLISKEPLQTQHLFQKALKTNKTMHFRLRSRLPINIIYQNVWIDKDGRLQIRE 433

Query: 408 D 408
            
Sbjct: 434 S 434


>gi|89092899|ref|ZP_01165851.1| hypothetical protein MED92_10574 [Oceanospirillum sp. MED92]
 gi|89082924|gb|EAR62144.1| hypothetical protein MED92_10574 [Oceanospirillum sp. MED92]
          Length = 411

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 173/364 (47%), Gaps = 13/364 (3%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           I K+ +A  E  I   Q  L+   WP L   + L  G+ S  + +LR RL++ GDLD   
Sbjct: 52  IEKQILALEEHKIRLEQLSLA-NQWPSLLKTKLLRFGDESTVIPKLRTRLMLLGDLDELV 110

Query: 129 GLSV---AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
              +    F   + +A+  FQ RHGL   G+   +T   +NV    R  Q+ VN+ R+K 
Sbjct: 111 HCELDDPLFGIDLHNALIKFQKRHGLKADGIYGPATRRELNVSPSSRALQITVNIDRLKS 170

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                +  RY+ VNIP   L   E+G   L    IVG+  R+TP+ ++ +NR++ NP W 
Sbjct: 171 F--NPVSDRYIQVNIPEYRLRLFEHGAEILSMKTIVGKKKRKTPVFNTTVNRLVINPSWH 228

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNS-PEPPNFI-FRQ 300
           +P+SI  KD++  L  DP+YLK  N+ ++   G    +   ++VD +   +  N+  F +
Sbjct: 229 VPKSIAYKDIVPELESDPEYLKKMNLKLVTGWGNSKTILSQDQVDLDKLYKGENYQRFWE 288

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P     + S K       + Y+HDT    LF    R  +SGC+RV     L   L++ T
Sbjct: 289 PPSNNGTLGSVKFLTTGPYSVYLHDTSAKRLFEKETRAFSSGCIRVEKPRSLANELMRMT 348

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
             W +  ++      +   + +   + +H  Y +A+  ++  + FR D+Y  D   +  +
Sbjct: 349 HGWEKEKLDTYFNDTERKTINMPDTIDLHVTYWTAFIDENG-LNFRRDLYKKDRWEIAQL 407

Query: 421 PLPE 424
              E
Sbjct: 408 KQTE 411


>gi|254472994|ref|ZP_05086392.1| peptidoglycan-binding domain 1 [Pseudovibrio sp. JE062]
 gi|211957715|gb|EEA92917.1| peptidoglycan-binding domain 1 [Pseudovibrio sp. JE062]
          Length = 550

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 163/316 (51%), Gaps = 16/316 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES---AVKLFQMRHGLDPSGMVD 158
           L +G+ S  V  LRERL +     P+  +    + Y +    AV+ FQ  +GL P G V 
Sbjct: 234 LKVGSKSSRVALLRERLSV-----PT--VESQMNVYTQDLAYAVEAFQAANGLHPDGAVG 286

Query: 159 SSTLEAMNVPVDLR-IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             TL A+N  V    I+ +  N+ R +  + + +G  ++ VNIP   +     G V   +
Sbjct: 287 PRTLLALNGRVSGDPIKDVIANMERWR-WMPRDLGETHLRVNIPEFMVRLNMEGFVLYET 345

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR-QDPQ-YLKDNNIHMID 275
            V+VG+   +TP+   ++  ++ NPYW +P SI  K+++  LR  +PQ YL+  N  ++ 
Sbjct: 346 RVVVGKRSNKTPVFSDKMQHVVVNPYWNVPYSIASKELLPELRASNPQSYLQKGNYEIV- 404

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
             GK V    V+W++        RQ PG+ NA+   K  F +++N Y+HDTP   LFN  
Sbjct: 405 YGGKIVDPRRVNWDAVTFKQIRIRQRPGRGNALGKIKFMFPNKHNVYLHDTPSKSLFNRS 464

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            R  + GCVRV+N  +    L+    T +  +I  +V  +K T V L  ++PVH  Y +A
Sbjct: 465 ERAFSHGCVRVQNPFEFSDALMATQDTITGNYIRSLV-GKKQTQVNLQKDIPVHISYFTA 523

Query: 396 WSPKDSIIQFRDDIYG 411
           +  +   +Q R DIYG
Sbjct: 524 FVDEAGKLQRRPDIYG 539


>gi|149191672|ref|ZP_01869915.1| hypothetical protein VSAK1_04600 [Vibrio shilonii AK1]
 gi|148834513|gb|EDL51507.1| hypothetical protein VSAK1_04600 [Vibrio shilonii AK1]
          Length = 548

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 148/284 (52%), Gaps = 11/284 (3%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FD  ++ A++ FQ  +GL+  G++  +T+E +N     ++R L +N  R +   +Q+  +
Sbjct: 258 FDELLDLAIREFQTIYGLNDDGIIGPNTIEWLNKSASDKLRILALNSERSRLWPQQRENI 317

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   LE  + G+    S VIVGR  RQTP+L ++++ ++ NP W +P  I+ K
Sbjct: 318 --IVVNVPNFQLEYWDEGEERFESRVIVGRASRQTPLLETKMDSLILNPTWNVPWKIMVK 375

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++  ++Q+P YL    I +++    +  ++   +DW       F +  RQ  G++NA+ 
Sbjct: 376 DIIPKVKQNPTYLFSQRIEILEGWNNQARIDPTMIDWQEVNARRFPYRMRQQAGELNALG 435

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    +    ++HDTP   LF+  +R  +SGCVRV +       LL+         +E
Sbjct: 436 QYKFNTPNAQAIFLHDTPSKHLFDESLRAFSSGCVRVEHADQFAQVLLEAQGK----TLE 491

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +V   R    + L   +PVH +Y +AW   D    FR D+Y  D
Sbjct: 492 DVATDRPNKAIALKQRIPVHIIYQTAWM-SDGKAHFRGDVYQYD 534


>gi|312883636|ref|ZP_07743361.1| hypothetical protein VIBC2010_12494 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368859|gb|EFP96386.1| hypothetical protein VIBC2010_12494 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 517

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 171/314 (54%), Gaps = 12/314 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           L N ++ ++RL    ++  D+   +     +DA +E A+K FQ  HG++  G++   T++
Sbjct: 205 LENRAILLRRLE---MVGIDIHRVRKDVTWYDASLEDAIKQFQSLHGIEVDGVIGPVTIK 261

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            +N+ V+ R+  L +N  RI+   +Q+  L  ++VN+P+  L+    G+    S V+VGR
Sbjct: 262 WLNLSVNKRLSILAINAERIRYWPDQREQL--IVVNVPSFHLKYWRLGETVFESKVVVGR 319

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
             R TP++ ++++ ++ NP W +P  I+ +D++  +++D  YL  +NI ++ + G   F+
Sbjct: 320 RGRPTPVMTTKLHSLILNPTWNVPWRIMVEDIIPKVKKDKNYLVRHNIKIVPKWGASDFI 379

Query: 284 --EEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
             E +DW+  +P  F ++  Q  G  NA+   K    +R   Y+HDTP   LF+   R  
Sbjct: 380 NPESIDWDRLKPSRFPYQMTQMSGDKNALGLFKFNTPNRRAIYLHDTPVKSLFDETQRAF 439

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGC+R+ +       LL+           E + + ++ P+K  + +PVH +Y +AW   
Sbjct: 440 SSGCIRIEHADLFADLLLESEGLVIEEEDNEPLGSNQSIPLK--SRIPVHIIYQTAWYEG 497

Query: 400 DSIIQFRDDIYGLD 413
            + + +R+DIY +D
Sbjct: 498 GN-VHYREDIYRMD 510


>gi|251792219|ref|YP_003006940.1| periplasmic protein [Aggregatibacter aphrophilus NJ8700]
 gi|247533607|gb|ACS96853.1| periplasmic protein [Aggregatibacter aphrophilus NJ8700]
          Length = 506

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 131/241 (54%), Gaps = 7/241 (2%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ L   + G   + VNIP+  L    +G+  L S VIVG+ +R+TP++ SR
Sbjct: 253 RLAINAQRLRILPTFQNG---IFVNIPSYQLTYYRDGEAVLNSRVIVGKTERKTPVMFSR 309

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W  P  +I +D++  +R+DP Y+  N   +ID  G  +    +DW +    
Sbjct: 310 LSNVVVNPSWNAPTRLINEDIIPKVRKDPSYIYRNGYTIIDGNGNTIDPYTIDWENMTAK 369

Query: 295 NFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            F +  RQ P   +A+ + K    S +  Y+HDTP+  LF N  R  +SGCVRV     L
Sbjct: 370 KFPYRLRQAPSDNSALGNYKFNMPSSDAIYLHDTPKRSLFGNKKRDLSSGCVRVEKSDQL 429

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   WS    + V+K+RKTT   + ++ PV   Y++AW  KD +     DIYG 
Sbjct: 430 ATILLKEA-GWSDERKQNVLKSRKTTSASIKSDNPVFLYYVTAWVDKDQVHTL-PDIYGY 487

Query: 413 D 413
           D
Sbjct: 488 D 488


>gi|328474745|gb|EGF45550.1| putative amidase [Vibrio parahaemolyticus 10329]
          Length = 513

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 157/318 (49%), Gaps = 8/318 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L +G+   +   L ER+ I G D+         +D  +E AVK FQ  HGL+  G++  +
Sbjct: 197 LRIGDPIENKSTLVERMAIVGVDVSYIDSEIPQYDENLELAVKEFQRIHGLNQDGVIGPN 256

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T+  +N     R+  L +N  R +   +++  +  V VN+P   +    +G+    S V+
Sbjct: 257 TIRWINFSPQQRLHLLALNAERSRIWAKERDNV--VFVNVPGYEVTYWHDGQPLFESKVV 314

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VGR  R+TPI+   ++ ++ NP W +P  I+ KD++  ++++P YL ++NI +I      
Sbjct: 315 VGRASRKTPIMTGTLDSVILNPTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSR 374

Query: 281 VFVE--EVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
             ++   ++W +  P  F +  RQ  G  NA+   K    +    Y+HDTP   LF    
Sbjct: 375 EIIDPTTINWATVNPRTFPYRMRQASGSHNALGLYKFNMPNPQAIYLHDTPSKNLFQQDR 434

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGCVRV N   L   L K      R   +       TT V L   +PVH +Y +AW
Sbjct: 435 RAFSSGCVRVENADQLAELLFKTQGLEERLEKKRESARSSTTSVPLGERIPVHIIYQTAW 494

Query: 397 SPKDSIIQFRDDIYGLDN 414
             ++  + +RDDIY  D+
Sbjct: 495 L-EEGTLYYRDDIYKYDH 511


>gi|294141900|ref|YP_003557878.1| hypothetical protein SVI_3129 [Shewanella violacea DSS12]
 gi|293328369|dbj|BAJ03100.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 615

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 154/290 (53%), Gaps = 6/290 (2%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +   Q + A+  Y+ +     +P +  + L   G+ + ++  + +RLI    L P   +S
Sbjct: 202 DAYTQLKSALKKYRLLADTADFPNIKYQGLIKAGSVTPTLALIADRLIQLNYLSPQADIS 261

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
                +V  AV+ +Q  H L   G++   T+ ++NVP   R  Q+++N+ R  + L   +
Sbjct: 262 NYSHEFV-GAVRAYQSSHSLQADGIIGKGTINSLNVPFAYRADQIRINMER-ARWLSSDL 319

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
              Y+++N+    L   ++G++  ++ +++G++  +TPI  SRI+ ++ NP W +PRS I
Sbjct: 320 SQEYIIINLAGYELWMYKDGQLDWQTDIVIGKISSKTPIFKSRISYLVVNPTWTVPRS-I 378

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF--IFRQDPGKINAMA 309
              ++  +++DP Y+   +  + D  GK+V +  +DW   +P  F   F Q P K NA+ 
Sbjct: 379 NPGLINKIKRDPSYIDKQHYMLKDSSGKKVDILAIDWQEVDPEKFKYWFVQKPWKNNALG 438

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
             K  F +R+  Y+HDTP   LF+   R  + GC+R++N ++L   LL +
Sbjct: 439 QVKFIFPNRDAIYLHDTPTKYLFSLTDRAFSHGCIRIKNPLELAEKLLNE 488


>gi|83593271|ref|YP_427023.1| ErfK/YbiS/YcfS/YnhG [Rhodospirillum rubrum ATCC 11170]
 gi|83576185|gb|ABC22736.1| ErfK/YbiS/YcfS/YnhG [Rhodospirillum rubrum ATCC 11170]
          Length = 599

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 165/353 (46%), Gaps = 34/353 (9%)

Query: 85  YQDILSRGGWPE-----LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA------ 133
           YQ +   GGWP        I+P   G+    +  +R RL   G +  S    +       
Sbjct: 238 YQALARDGGWPTDLADGASIKP---GDRDPRLPEMRRRLAAEGLVVGSDPTFIGPPDAEL 294

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
            D ++  AV++FQ  HGL   G++   TL  MN     RI Q++V L R + LL + +G 
Sbjct: 295 LDDFLVEAVRIFQAAHGLSADGVIGRGTLVDMNTTPAQRITQIRVALERWR-LLPRALGQ 353

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            ++LVN+P   L   E     L   V VGR D +TP+    +  + FNPYW +P SI Q 
Sbjct: 354 THLLVNVPQYQLYLNEGRTTVLSMRVAVGRQDFETPLFSDTLRYMEFNPYWNVPISIAQA 413

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKE-----VFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +++    ++  YL      ++  +G E     V  E VDW +    ++  RQDPG  N +
Sbjct: 414 EVIPKQIENSAYLAKKGFTVL-PRGVEGWDDGVGHESVDWKADAARSYRLRQDPGPANPL 472

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
            + K  F +    Y+HDT    +F+   R  + GCVRV+    L  ++L+      R+  
Sbjct: 473 GTVKFMFPNEYAVYLHDTNSRGVFDRSARAVSHGCVRVQEPALLANYILE------RF-T 525

Query: 369 EEVVKT----RKTTP--VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           + + KT       TP  V+L   +P+H VYI+AW  +   + F  DIY  D  
Sbjct: 526 DRIGKTAADFSGPTPKVVRLNRPLPIHLVYITAWGGEGGKVAFVRDIYAKDRA 578


>gi|327483956|gb|AEA78363.1| L,D-transpeptidase YcbB [Vibrio cholerae LMA3894-4]
          Length = 536

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 153/290 (52%), Gaps = 15/290 (5%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +E  +K FQ  HGL   G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 233 YDTSLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 292

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 293 --IVVNVPGFDMKYWDAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 350

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++ + +I        ++   +DW + +P  F +  RQ  G  NA+ 
Sbjct: 351 DILPMVKRDSEYLANHRMEIIRGWSDPEVIDPALIDWETVDPETFPYRLRQLAGVQNALG 410

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRYHI 368
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL +   T   + +
Sbjct: 411 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 470

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                   T  + L   +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 471 -------STQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 512


>gi|209549608|ref|YP_002281525.1| peptidoglycan-binding protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535364|gb|ACI55299.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 636

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 139/280 (49%), Gaps = 15/280 (5%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ--VNLMRIKKLLEQKMGLRYVL 197
           S V+ FQ   GL   G++  +T+ AM    D    ++   V  M   + L + +G RYV+
Sbjct: 350 SLVEAFQQERGLKADGVIGQATVRAM-TGGDTNASKIDKLVVAMEQARWLPEDLGSRYVM 408

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           +N PA  +    +GK  L   V+VG  + QT      I  + FNP+W +P+SII  +M+ 
Sbjct: 409 INQPAFMVYYHNDGKEQLSMRVVVGGKNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLP 468

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
            LR DP YL D   + ++  G  V    VDW      N   RQ P   NA+   KI F +
Sbjct: 469 KLRSDPNYL-DQLGYEVEVNGHAVASSSVDWYG-STNNVSVRQPPSSDNALGELKILFPN 526

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK---T 374
            +  YMHDTP    F   +R  + GCVR+ N   +   +L  T       +++V K   T
Sbjct: 527 SHAIYMHDTPSKSFFKRDMRALSHGCVRLANPRAMAAAVLGTT-------VDDVAKQIAT 579

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            +   VK+  ++PV+  Y +AW  KD ++++ DD+YG D 
Sbjct: 580 GQNHAVKVPQKIPVYVSYFTAWPNKDGVVEYFDDVYGRDG 619


>gi|258624450|ref|ZP_05719397.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258583297|gb|EEW08099.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 522

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 154/296 (52%), Gaps = 27/296 (9%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +   +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 232 YDQTLVKPIKQFQSMHGLKPDGVIGPETMKWLNKSVTERLALLALNAERIRLWSTQQGTV 291

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VGRV R TP+++++++ ++ NP W +PR I+ +
Sbjct: 292 --IVVNVPGFEMKYWDAGREVFGAKVVVGRVTRPTPVMNTKLDSLIINPTWNVPRKIMVE 349

Query: 254 DMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEE-VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL  + I +I      EV   + +DW+S  P  F +  RQ  G  NA+ 
Sbjct: 350 DILPMVKRDSEYLARHQIEIIRSWSDPEVLDPQLIDWSSINPETFPYRMRQQAGVQNALG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN-------IIDLDVWLLKDTPT 362
             K    +    Y+HDTP   LFNNV R  +SGC+RV N       +++    +L + P 
Sbjct: 410 MYKFNTPNSRAIYLHDTPSKHLFNNVSRAFSSGCIRVENAQKFAQTLLEQQGIVLNELPA 469

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           +             T  + L   +PV  +Y + W  +   +Q+RDDIY  D+  + 
Sbjct: 470 Y-------------TQAIALKKRIPVQIIYQTVWY-EGGALQYRDDIYRYDSSSIS 511


>gi|262171698|ref|ZP_06039376.1| hypothetical protein VII_002521 [Vibrio mimicus MB-451]
 gi|261892774|gb|EEY38760.1| hypothetical protein VII_002521 [Vibrio mimicus MB-451]
          Length = 522

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 155/296 (52%), Gaps = 27/296 (9%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +   +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 232 YDQTLVKPIKQFQNMHGLKPDGVIGPETMKWLNKSVTERLALLALNAERIRLWSTQQGTV 291

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  ++G+    + V+VGRV R TP+++++++ ++ NP W +PR I+ +
Sbjct: 292 --IVVNVPGFEMKYWDSGREVFGAKVVVGRVTRPTPVMNTKLDSLIINPTWNVPRKIMVE 349

Query: 254 DMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEE-VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL  + I +I      EV   + +DW+S  P  F +  RQ  G  NA+ 
Sbjct: 350 DILPMVKRDSEYLARHQIEIIRSWSDPEVLDPQLIDWSSINPETFPYRMRQQAGVQNALG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN-------IIDLDVWLLKDTPT 362
             K    +    Y+HDTP   LFNNV R  +SGC+RV N       +++    +L + P 
Sbjct: 410 MYKFNTPNSRAIYLHDTPSKHLFNNVSRAFSSGCIRVENAQKFAQTLLEQQGIVLNELPA 469

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           +             T  + L   +PV  +Y + W  +   +Q+RDDIY  D+  + 
Sbjct: 470 Y-------------TQAIALKKRIPVQIIYQTVWY-EGGALQYRDDIYRYDSSSIS 511


>gi|239995151|ref|ZP_04715675.1| peptidoglycan binding domain-containing protein [Alteromonas
           macleodii ATCC 27126]
          Length = 481

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 140/270 (51%), Gaps = 13/270 (4%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           ++P+ P L L ++S  V  L+ RL+  G        S  FD  +  AVK FQM  G++P 
Sbjct: 207 QIPVGPTLKLNSTSERVVLLKSRLLGPGTY------SELFDKDLLDAVKQFQMSAGIEPD 260

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+V SSTLEA+N      + ++  NL R + L  Q     Y+ VNI +  L     G+  
Sbjct: 261 GIVGSSTLEALNATTFSWLERIDANLERWRWLPHQTWS-TYLRVNIASFQLRGFTEGEET 319

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           L   VIVG   RQTP+    +  ++FNPYW +P SI  KD +A L+ +P  L +   +  
Sbjct: 320 LGMPVIVGTPVRQTPVFAESMKYMVFNPYWTVPFSIATKDKLAKLKTNPSLLVEQG-YEA 378

Query: 275 DEKGKEVF--VEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
              G   F  V++ DW +     F +  RQ PG  NA+   K    +++  Y+HDTP+  
Sbjct: 379 QPAGVSGFSPVDKFDWTNVSRGTFHYTLRQKPGPHNALGKVKFMLPNKHAIYLHDTPDHS 438

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           LF+ + R  +SGC+RV N + L  W+L  +
Sbjct: 439 LFSKLERNFSSGCIRVSNPLKLSQWVLTHS 468


>gi|152995955|ref|YP_001340790.1| peptidoglycan-binding domain-containing protein [Marinomonas sp.
           MWYL1]
 gi|150836879|gb|ABR70855.1| Peptidoglycan-binding domain 1 protein [Marinomonas sp. MWYL1]
          Length = 556

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 173/347 (49%), Gaps = 20/347 (5%)

Query: 79  EKAIAFYQDILSRGGWPELPIR-----PLHLGNSSVSVQRLRERLIISGDLDPS--KGLS 131
           +K + +YQD+ ++    E  I      PL  G+    V +LR RL+  GD+  S  K   
Sbjct: 200 QKWLVYYQDLAAK----EKDIFVSAGVPLSAGDEGPRVAQLRARLVQLGDIRFSTRKVNE 255

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FD  ++ A+  FQ RH +   G   S T++ +NVP+  R +Q+  NL R +  L  ++
Sbjct: 256 EQFDIRLKEALIRFQQRHHITADGAAGSKTIQMLNVPLKTRAKQIAYNLERWR-WLPSEL 314

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               + V++   +++   NG++     VI G+ DR+TP+    +  ++ NP W +P  I 
Sbjct: 315 EANRIWVDLTNYTVDMYLNGELTSMKAVI-GKPDRKTPVFKGLMTYMVTNPTWRVPHRIA 373

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDE---KGKEVFVEEVDWNSPEPPNFIFR--QDPGKIN 306
           +++++  L+ DP YL  +   +        KE+   +++W +       FR  Q P + N
Sbjct: 374 RENLLPKLQADPNYLVKHGYKVYSSWSIGAKELDSTKINWKAINEDKLAFRFEQKPDEGN 433

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+   K  F ++N  Y+HDTP   LF    R  +SGCVR+ N  +    + K +  ++  
Sbjct: 434 ALGQFKFMFPNKNEIYLHDTPAKHLFREEDRAFSSGCVRLENPTEFAKEITKGSKQFN-- 491

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            +   +KT   T + L T +PV+ VY +     + +++FR+DIY  D
Sbjct: 492 DMNNSLKTGSNTVITLPTYIPVYLVYFTVVPNANGMLEFRNDIYERD 538


>gi|90410380|ref|ZP_01218396.1| hypothetical amidase [Photobacterium profundum 3TCK]
 gi|90328621|gb|EAS44905.1| hypothetical amidase [Photobacterium profundum 3TCK]
          Length = 578

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 148/284 (52%), Gaps = 5/284 (1%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           A+K FQ RHGL   G++ ++T   + +P     R++ +N+ R + +        ++ VNI
Sbjct: 284 AIKRFQRRHGLADDGLIGAATTAQLVMPYTDIARRIALNMQRFRNI-NMIDNQPHIWVNI 342

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   L+  + G V   S VIVGR  R T +  S IN ++ NP W +P +I +KD++  ++
Sbjct: 343 PDYMLKIFDQGNVIFESKVIVGRTSRPTNLFSSAINTMVVNPTWNVPETIKRKDVIPKVK 402

Query: 261 QDPQYLKDNNIHMIDE--KGKEVFVEEVDWNSPEPPNF--IFRQDPGKINAMASTKIEFY 316
               YL  +N+ +++      E+  +++DW++  P  F   F+Q PG  N++   K    
Sbjct: 403 HSRDYLTAHNMRILNSWRDRTEIPADQIDWSNVNPKTFPHEFQQGPGPSNSLGRVKFLMP 462

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +  + Y+HDTP   LFN   R  +SGCVRV    DL  +++      +      ++    
Sbjct: 463 NDYSIYLHDTPARGLFNKSKRNLSSGCVRVEKAYDLANFIIDFQKRKNIEPFNAMLNDGD 522

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
              V+L+  + V FVY++AW  + + +Q R+DIYG D+    +I
Sbjct: 523 LDTVRLSQRLGVDFVYLTAWVDEKNTLQMREDIYGYDSQQKDVI 566


>gi|258620190|ref|ZP_05715229.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587548|gb|EEW12258.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 522

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 154/296 (52%), Gaps = 27/296 (9%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +   +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 232 YDQTLVKPIKQFQNMHGLKPDGVIGPETMKWLNKSVTERLALLALNAERIRLWSTQQGTV 291

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VGRV R TP+++++++ ++ NP W +PR I+ +
Sbjct: 292 --IVVNVPGFEMKYWDAGREVFGAKVVVGRVTRPTPVMNTKLDSLIINPTWNVPRKIMVE 349

Query: 254 DMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEE-VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL  + I +I      EV   + +DW+S  P  F +  RQ  G  NA+ 
Sbjct: 350 DILPMVKRDSEYLARHQIEIIRSWSDPEVLDPQLIDWSSINPETFPYRMRQQAGVQNALG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN-------IIDLDVWLLKDTPT 362
             K    +    Y+HDTP   LFNNV R  +SGC+RV N       +++    +L + P 
Sbjct: 410 MYKFNTPNSRAIYLHDTPSKHLFNNVSRAFSSGCIRVENAQKFAQTLLEQQGIVLNELPA 469

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           +             T  + L   +PV  +Y + W  +   +Q+RDDIY  D+  + 
Sbjct: 470 Y-------------TQAIALKKRIPVQIIYQTVWY-EGGALQYRDDIYRYDSSSIS 511


>gi|262165524|ref|ZP_06033261.1| hypothetical protein VMA_001971 [Vibrio mimicus VM223]
 gi|262025240|gb|EEY43908.1| hypothetical protein VMA_001971 [Vibrio mimicus VM223]
          Length = 522

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 154/296 (52%), Gaps = 27/296 (9%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +   +K FQ  HGL P G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 232 YDQTLVKPIKQFQNMHGLKPDGVIGPETMKWLNKSVTERLALLALNAERIRLWSTQQGTV 291

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    + V+VGRV R TP+++++++ ++ NP W +PR I+ +
Sbjct: 292 --IVVNVPGFEMKYWDAGREVFGAKVVVGRVTRPTPVMNTKLDSLIINPTWNVPRKIMVE 349

Query: 254 DMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEE-VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL  + I +I      EV   + +DW+S  P  F +  RQ  G  NA+ 
Sbjct: 350 DILPMVKRDSEYLARHQIEIIRSWSDPEVLDPQLIDWSSINPETFPYRMRQQAGVQNALG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN-------IIDLDVWLLKDTPT 362
             K    +    Y+HDTP   LFNNV R  +SGC+RV N       +++    +L + P 
Sbjct: 410 MYKFNTPNSRAIYLHDTPSKHLFNNVSRAFSSGCIRVENAQKFAQTLLEQQGIVLNELPA 469

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           +             T  + L   +PV  +Y + W  +   +Q+RDDIY  D+  + 
Sbjct: 470 Y-------------TQAIALKKRIPVQIIYQTVWY-EGGALQYRDDIYRYDSSSIS 511


>gi|255530583|ref|YP_003090955.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
 gi|255343567|gb|ACU02893.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
          Length = 471

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 130/241 (53%), Gaps = 3/241 (1%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L++NL R++    +  GL+YV VNI   SL+ ++ GK+ LR  V VG   RQTP L S I
Sbjct: 226 LKLNLERLR-WKNRPPGLKYVRVNIADFSLDVIDKGKLVLRMKVCVGEAARQTPQLSSMI 284

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPP 294
             +  NP W IP SI + +++    +D  YL +N+I++  + GK V+ +E +DW   EP 
Sbjct: 285 YSVQVNPVWNIPESIARNEIIKYASRDKYYLANNSINVF-KNGKRVWDLEAIDWGKAEPG 343

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
           ++ F+Q PG  N++   K  F + ++ Y+HDTP    FN   R  + GCVRV   ++L  
Sbjct: 344 SYSFKQRPGMKNSLGKIKFLFKNESSVYLHDTPVKSAFNQKNRAISHGCVRVEKPLELAF 403

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L    P + +          +   + L T +P+   Y +A + +   + F  DIYGLD+
Sbjct: 404 VLFGKGPKYDQVKNAMQSGYPREKYIGLPTAIPISIAYYTALADQQGKVIFNKDIYGLDD 463

Query: 415 V 415
           +
Sbjct: 464 M 464


>gi|227329504|ref|ZP_03833528.1| hypothetical protein PcarcW_20031 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 579

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 146/281 (51%), Gaps = 10/281 (3%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVN 199
           AVK FQ   GL+  G++   T + +NV   +R   L +N+ R++ L +    G   ++VN
Sbjct: 287 AVKRFQHWQGLEDDGVIGKRTRDWLNVSPQMRATLLALNIQRLRLLPDNVHTG---IMVN 343

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP  SL   ++G   L S VIVG+  R+TP++ S +  ++ NP W +P ++ ++D++  +
Sbjct: 344 IPNYSLIYYQDGAERLSSRVIVGQPKRKTPLMSSSLYNVVVNPPWNVPTTLTRQDIIPKV 403

Query: 260 RQDPQYLKDNNIHMI---DEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIE 314
            +DP YL+ +   ++    +  + +    +DW   S E   +  RQ PG  N++   K  
Sbjct: 404 VRDPGYLQRHGYTVLSGWSQDAEAIDPSMIDWQMVSAERFPYRLRQAPGANNSLGRYKFN 463

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             +    Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I   +  
Sbjct: 464 MPNSEAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELASMLLQDA-GWNNSRISSTLDQ 522

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             TT V +   +PV+  Y++AW  +D   QFR DIY  D+ 
Sbjct: 523 GNTTFVSMKHRIPVNLYYLTAWVAEDGRPQFRTDIYNYDDT 563


>gi|261868418|ref|YP_003256340.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413750|gb|ACX83121.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 502

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 133/243 (54%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L +N  R++ L E   G   + VNIP+  L    +GK+ L S VIVG   R+TP++ 
Sbjct: 246 LHRLAINAQRLRILPEFDNG---IFVNIPSYQLNYYRDGKLVLNSRVIVGTDKRKTPVMF 302

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           SR++ ++ NP W  P  +I +D++  +R+DP Y+  N   +ID KG  +    +DW +  
Sbjct: 303 SRLSNVVVNPPWNAPTRLINEDIIPKVRRDPSYIYRNGYTIIDGKGNTIDPYTIDWENMT 362

Query: 293 PPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              F +  RQ P   +A+ + K    S +  Y+HDTP+  LF N  R  +SGCVRV    
Sbjct: 363 AKKFPYRLRQVPSDNSALGNYKFNMPSSDAIYLHDTPKRSLFGNKRRDLSSGCVRVEKSE 422

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           +L   LLK+   W+    + V+K+RKTT V + +  PV   Y++AW  K+ +     D+Y
Sbjct: 423 ELATVLLKEA-GWTAERKQSVLKSRKTTSVTVKSNNPVFLYYVTAWVDKEQVHTL-PDVY 480

Query: 411 GLD 413
           G D
Sbjct: 481 GYD 483


>gi|218678646|ref|ZP_03526543.1| hypothetical protein RetlC8_07084 [Rhizobium etli CIAT 894]
          Length = 396

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 142/288 (49%), Gaps = 15/288 (5%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD--LRIRQLQVNLMRIKKLLE 188
           S  +   + S V+ FQ   GL   G++  +T+ AM        +I +L V  M   + L 
Sbjct: 101 SADYSPEIVSLVEDFQKERGLKADGVIGQATVRAMTGGDSNASKIDKLDV-AMEQARWLP 159

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           + +G RYV++N PA       +GK  L   V+VG  + QT      I  + FNP+W +P+
Sbjct: 160 EDLGSRYVMINQPAFMAYYHNDGKEQLSMRVVVGGKNNQTYFFDDEIETVEFNPFWGVPQ 219

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SII  +M+  LR DP YL D   + ++  G  V    VDW      N   RQ P   NA+
Sbjct: 220 SIIINEMLPKLRSDPNYL-DQLGYEVEVNGHAVASSSVDWYG-STDNVSVRQPPSSDNAL 277

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              KI F + +  YMHDTP    F   +R  + GCVR+ N   +   +L  T       +
Sbjct: 278 GELKILFPNSHAIYMHDTPSKSFFKRDMRALSHGCVRLSNPRAMAAAVLGTT-------V 330

Query: 369 EEVVK---TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           ++V K   T +   VK+  ++PV+  Y +AW  KD ++++ DD+YG D
Sbjct: 331 DDVAKQIATGQNHAVKVPQKIPVYVSYFTAWPNKDGVVEYFDDVYGRD 378


>gi|227111943|ref|ZP_03825599.1| hypothetical protein PcarbP_03208 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 578

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 170/347 (48%), Gaps = 18/347 (5%)

Query: 77  QTEKAIAFYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           Q  + +A  ++IL R G       I   +   ++ +V   +  L+  G +D        +
Sbjct: 226 QQSRELAVLREILQRTGMLSSTESITLFNENTAATTVSTGQAPLVEGGAIDDR------Y 279

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGL 193
              +  AVK FQ   GL+  G++   T + +NV   +R   L +N+ R++ L +    G 
Sbjct: 280 TGELVDAVKRFQHWQGLEDDGVIGKRTRDWLNVSPQMRATLLALNIQRLRLLPDNVHTG- 338

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIP  SL   ++G   L S VIVG+  R+TP++ S +  ++ NP W +P ++ ++
Sbjct: 339 --IMVNIPNYSLIYYQDGAERLSSRVIVGQPKRKTPLMSSSLYNVVVNPPWNVPTTLTRQ 396

Query: 254 DMMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAM 308
           D++  + +DP YL+ +   ++    +  + +    +DW   S E   +  RQ PG  N++
Sbjct: 397 DIIPKVVRDPGYLQRHGYTVLSGWSQDAEAIDPSMIDWPMVSAERFPYRLRQAPGANNSL 456

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    +    Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I
Sbjct: 457 GRYKFNMPNSEAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELASMLLQDA-GWNNSRI 515

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              +    TT V +   +PV+  Y++AW  +D   QFR DIY  D+ 
Sbjct: 516 SSTLDQGNTTFVSMKHRIPVNLYYLTAWVAEDGRPQFRTDIYNYDDT 562


>gi|332826880|gb|EGJ99680.1| hypothetical protein HMPREF9455_03943 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 593

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 138/257 (53%), Gaps = 9/257 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           LG+ S  ++ +  RL+++G+  P    S  L +  D  + +A+  F+ R+       V  
Sbjct: 237 LGDKSKHIKDIAGRLMLTGEYKPDSISSDSLHIKLDEELLAAINTFRRRNSYPEEAEVGK 296

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA--VENGKVGLRS 217
            T+ A+N P +  + +++ N+ R +    +    +++ VN+ AA L A   +N  + L S
Sbjct: 297 LTISALNRPFEYYLAKIRANMERYRWKRAKAKHYKHIEVNVAAAMLVANNTKNDSLPLIS 356

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V VG V  +TP+L S I+ +  NP W +P SI QK++  L ++DP Y+K +N+ +  + 
Sbjct: 357 RVCVGSVRNKTPLLQSDISYMNLNPIWNVPASIAQKEVAVLQKKDPTYIKRHNMKLY-KG 415

Query: 278 GKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           GKEV V  +DW    P  F +  +QDPG  N++   K  F +  + Y+HDTP  + FN  
Sbjct: 416 GKEVDVSSIDWEDVNPSKFSYTIKQDPGGGNSLGLVKFMFNNAFSVYLHDTPSKLAFNRK 475

Query: 336 VRFETSGCVRVRNIIDL 352
            R  + GCVRV+   DL
Sbjct: 476 NRAVSHGCVRVQKPFDL 492


>gi|262402380|ref|ZP_06078941.1| hypothetical protein VOA_000347 [Vibrio sp. RC586]
 gi|262351162|gb|EEZ00295.1| hypothetical protein VOA_000347 [Vibrio sp. RC586]
          Length = 522

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 151/285 (52%), Gaps = 13/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  + + +K FQ  HGL P G+V   T++ +N  +  R+  L +N  R++  L      
Sbjct: 232 YDQALVNPIKQFQSMHGLKPDGVVGPETMKWLNKSMAERVSLLALNAERLR--LWPAPQD 289

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P  +++  + G+    + V+VGRV R TP+++++++ ++ NP W +PR I+ +
Sbjct: 290 TAIVVNVPGFAMKYWDAGQEVFEAKVVVGRVTRPTPVMNTKLDSLIINPTWNVPRKIMVE 349

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL  + + +I        V+   +DW S +P  F +  RQ  G  NA+ 
Sbjct: 350 DILPMVKRDHEYLAKHQMEIIRGWNDPEVVDPQLIDWASVDPETFPYRMRQQAGVQNALG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    +    Y+HDTP   LFNN  R  +SGC+RV N       LL+         + 
Sbjct: 410 MYKFNTPNSRAIYLHDTPSKHLFNNAARAFSSGCIRVENAQKFAQTLLEQ----QGIVLN 465

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           E+ +  KT  + L   +PVH +Y + W  +   +Q+RDDIY  D 
Sbjct: 466 ELPEKTKT--IALKKRIPVHIIYQTVWY-EGGKLQYRDDIYRYDT 507


>gi|15888928|ref|NP_354609.1| hypothetical protein Atu1615 [Agrobacterium tumefaciens str. C58]
 gi|15156702|gb|AAK87394.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 642

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 137/274 (50%), Gaps = 8/274 (2%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           VK FQ  +GL P G++  +T+ AM     D +I ++QV + +++  L   +G RYV +N 
Sbjct: 359 VKAFQSENGLKPDGVIGRATVRAMVGESNDAKIAKVQVAMEQVR-WLPADLGQRYVFINQ 417

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PA       +G       V+VG    QT      I  + FNPYW +P+SII  +M+  LR
Sbjct: 418 PAFMAYYHNDGVEQFGMKVVVGSKANQTYFFQDEIQTVEFNPYWGVPQSIIVNEMLPKLR 477

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP YL D   + +   G+ V    V+W        + RQ P   NA+   KI F + + 
Sbjct: 478 RDPSYL-DRLGYEVQVGGRAVSSSSVNWYGSTNAVSV-RQPPSSDNALGDLKILFPNAHA 535

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP    FN  +R  + GC+R+ +   +   +L      S   + E +   K   V
Sbjct: 536 IYMHDTPAKSFFNRDMRALSHGCIRLVDPRRMAAAVLGS----SVDKVNEQIAAGKNRAV 591

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           ++  +VPV+  Y +AW  KD  +QF DD+Y  D+
Sbjct: 592 QVPEKVPVYVAYFTAWPDKDGKVQFFDDVYDRDS 625


>gi|254437318|ref|ZP_05050812.1| Putative peptidoglycan binding domain protein [Octadecabacter
           antarcticus 307]
 gi|198252764|gb|EDY77078.1| Putative peptidoglycan binding domain protein [Octadecabacter
           antarcticus 307]
          Length = 541

 Score =  143 bits (360), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 170/334 (50%), Gaps = 10/334 (2%)

Query: 86  QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + +L+ GGW P +    L  G S   V  LR+RL+  G ++ S   +  +D  +++AV+ 
Sbjct: 195 ERLLANGGWGPSVSSSSLAAGASGAGVVALRDRLVAMGHMERSA--TQTYDVTIQAAVQR 252

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL   G   ++TL  +NVP   R++Q+ V + R ++ + +  G R+V VN+   S
Sbjct: 253 FQQAHGLTADGDAGAATLAEINVPAASRLQQIIVAMER-ERWMNRPRGERHVWVNLVDFS 311

Query: 205 LEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              ++N  V  ++  ++G     RQTP     ++ ++ NP W +PRSII  + +  +++ 
Sbjct: 312 AAIMDNDSVTFQTRSVIGATGSGRQTPEFSDVMDHMVINPSWFVPRSIIVGEYLPAMQRS 371

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
              +  ++I + D  G+ V    V++++     F F  RQ P   NA+   K  F ++ N
Sbjct: 372 RDAI--SHILLTDGNGRTVNRGNVNFSNYTARTFPFSMRQPPSSRNALGLVKFMFPNQYN 429

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF   +R  + GC+R+ +  +    LL         + + ++ +   T V
Sbjct: 430 IYLHDTPAKSLFAREIRAYSHGCIRLNDPFEFGHALLAAQEADPEGYFQRILNSGTETRV 489

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L   VPVH VY +A++     + FR DIY  D+
Sbjct: 490 NLVDPVPVHIVYRTAFTHTTGQLNFRRDIYDRDS 523


>gi|293392039|ref|ZP_06636373.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952573|gb|EFE02692.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 502

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 132/241 (54%), Gaps = 7/241 (2%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ L E   G   + VNIP+  L    +GK+ L S VIVG   R+TP++ SR
Sbjct: 248 RLAINAQRLRILPEFANG---IFVNIPSYQLNYYRDGKLVLNSRVIVGTDKRKTPVMFSR 304

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W  P  +I +D++  +R+DP Y+  N   +ID KG  +    +DW +    
Sbjct: 305 LSNVVVNPPWNAPTRLINEDIIPKVRRDPSYIYRNGYTIIDGKGNTIDPYTIDWENMTAK 364

Query: 295 NFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            F +  RQ P   +A+ + K    S +  Y+HDTP+  LF N  R  +SGCVRV    +L
Sbjct: 365 KFPYRLRQVPSDNSALGNYKFNMPSSDAIYLHDTPKRSLFGNKRRDLSSGCVRVEKSEEL 424

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+    + V+K+RKTT V + +  PV   Y++AW  K+ +     D+YG 
Sbjct: 425 ATVLLKEA-GWTAERKQSVLKSRKTTSVTVKSNNPVFLYYVTAWVDKEQVHTL-PDVYGY 482

Query: 413 D 413
           D
Sbjct: 483 D 483


>gi|116252447|ref|YP_768285.1| hypothetical protein RL2700 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115257095|emb|CAK08189.1| conserved hypothetical exported protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 637

 Score =  142 bits (359), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 142/286 (49%), Gaps = 9/286 (3%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ--VNLMRIKKLLE 188
           S+ +   + S V+ FQ   GL P G++  +T+ AM    D    ++   V  M   + L 
Sbjct: 342 SIDYSPDIVSLVEDFQKERGLKPDGVIGQATVRAM-TGGDTNASKIDKLVVAMEQARWLP 400

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           + +G RYV++N PA  +    +GK  L   V+VG  + QT      I  + FNP+W +P+
Sbjct: 401 EDLGSRYVMINQPAYMVYYHNDGKEQLSMRVVVGGKNNQTYFFDDEIETVEFNPFWGVPQ 460

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SII  +M+  LR DP YL D   + ++  G  V    VDW      N   RQ P   NA+
Sbjct: 461 SIIINEMLPKLRSDPNYL-DQLGYEVEVNGHAVASSSVDWYG-STNNVSVRQPPSSDNAL 518

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              KI F + +  YMHDTP    F   +R  + GCVR+ +   +   +L  T       I
Sbjct: 519 GELKILFPNSHAIYMHDTPSKSFFKRDMRALSHGCVRLADPRAMAAAVLGTTVD----DI 574

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            + + + +   V++  ++PV+  Y +AW  KD ++++ DD+YG D 
Sbjct: 575 AKQIASGQNHAVRVPQKIPVYVSYFTAWPNKDGVVEYFDDVYGRDG 620


>gi|254420106|ref|ZP_05033830.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
 gi|196186283|gb|EDX81259.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
          Length = 520

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 158/336 (47%), Gaps = 31/336 (9%)

Query: 85  YQDILSRGGWPELPIRPLHLGN-SSVSVQRLRERLIISGDLDPSKGL-----SVAFDAYV 138
           Y+ + ++GGWP  P  P    N S   +  L +RL   GDL  + G       + + + +
Sbjct: 182 YRRLAAQGGWPAFPAGPTIEPNMSDRRIPALIDRLTAEGDLTAANGARLKTEGLTYGSEL 241

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
           + AV+ FQ+RHGL   G + + T  +++   + R RQ+ +NL R ++ L++ +    + V
Sbjct: 242 QQAVQGFQVRHGLGADGRIGTGTQRSLSASAEDRARQIALNLER-RRWLKRDVAPERIEV 300

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           N  AA +   ++GK    + VIVG  + QTP L      ++ NP W +P SI +++   +
Sbjct: 301 NTAAAIMVYWKDGKPVHSNRVIVGSAENQTPSLEKPFASVVANPPWYVPASIARRE---I 357

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
           L + P YL  N++++                     N    Q  G   A+   K E    
Sbjct: 358 LPKGPAYLAANDMYV--------------------QNGTVIQRAGPKAALGYVKFELRDS 397

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
              ++HDTP    FN  +R  + GCVRV+N ++    LL   P       +    TR+TT
Sbjct: 398 YAIFLHDTPSKAAFNLSMRQRSHGCVRVQNAVEFARLLLSPDPV-KLAQFDTAQDTRETT 456

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            V    E+ V  +Y +A+      + FR+D+YG D+
Sbjct: 457 RVTTGREISVRLLYWTAFVDGQGRVAFREDVYGRDD 492


>gi|261821332|ref|YP_003259438.1| hypothetical protein Pecwa_2052 [Pectobacterium wasabiae WPP163]
 gi|261605345|gb|ACX87831.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
          Length = 575

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 156/306 (50%), Gaps = 14/306 (4%)

Query: 129 GLSVAFDAY---VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           G++ A D Y   +  AVK FQ   GL+  G++   T + +NV   +R   L +N+ R++ 
Sbjct: 268 GVANADDRYSGDLVEAVKRFQHWQGLEGDGVIGKRTRDWLNVSPQMRATLLALNIQRLRL 327

Query: 186 LLEQ-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           + +    G   ++VNIP  SL   ++G   L S VIVG+  R+TP++ S +  ++ NP W
Sbjct: 328 VPDNVHTG---IMVNIPNYSLIYYQDGAERLSSRVIVGQPKRKTPLMSSSLYNVVVNPPW 384

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPPNFIF--R 299
            +P ++ ++D++  + +DP YL+ +   ++    +  + +    ++W       F +  R
Sbjct: 385 NVPTTLTRQDIIPKVVRDPGYLQRHGYTVLSGWSQDAEAIDPSMIEWQGVSAERFPYRLR 444

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K    +    Y+HDTP   LF   +R  +SGCVRV    +L   LL+D
Sbjct: 445 QAPGANNSLGRYKFNMPNSEAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELASMLLQD 504

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVG 418
              W+   I   +    TT V +   +PV+  Y++AW  +D   QFR DIY  D+    G
Sbjct: 505 A-GWNNSRISSTLDQGNTTFVSMKHRIPVNLYYLTAWVAEDGRPQFRTDIYNYDDTARAG 563

Query: 419 IIPLPE 424
              LP+
Sbjct: 564 TKVLPK 569


>gi|110633909|ref|YP_674117.1| hypothetical protein Meso_1556 [Mesorhizobium sp. BNC1]
 gi|110284893|gb|ABG62952.1| conserved hypothetical protein [Chelativorans sp. BNC1]
          Length = 661

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 134/278 (48%), Gaps = 15/278 (5%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           +K  Q +H L P G+V   T+ A+       RI ++ +++ R++      +G   V++N+
Sbjct: 348 IKAVQRQHKLSPDGIVGQRTVRALTGESASSRIEKVLLSMERLR-WQPSYLGSARVMINV 406

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P+ +    ENG   L    +VG+   QT   H  I  + FNPYW +PRSII  +M+  LR
Sbjct: 407 PSFTASYFENGTEKLSMRAVVGQSSSQTYFFHDEIEYVEFNPYWGVPRSIIVNEMLPKLR 466

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDW-----NSPEPPNFIFRQDPGKINAMASTKIEF 315
           +DP YL      + D +G+ V    ++W     N P    +  RQ PG  NA+   KI F
Sbjct: 467 RDPGYLDRAGYEVFDSRGRRVASSAINWAVYGANVP----YGVRQPPGASNALGRLKIMF 522

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            + ++ YMHDTP+  LF    R  + GCVR+ +   +   +L  +       I +    R
Sbjct: 523 PNSHDIYMHDTPQKSLFARDSRAFSHGCVRLEDPGAMAAAVLGISSEEVAAEINKGRNMR 582

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +  P K    +PV+  Y +AW      I +  DIY  D
Sbjct: 583 RNVPSK----IPVYVGYFTAWPETSGSISYHADIYERD 616


>gi|219872270|ref|YP_002476645.1| hypothetical protein HAPS_2267 [Haemophilus parasuis SH0165]
 gi|219692474|gb|ACL33697.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
          Length = 516

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 144/286 (50%), Gaps = 17/286 (5%)

Query: 137 YVESAVKLFQ------MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           Y E+  KLF+      +  G + S         ++N P      QL +N  R++ +    
Sbjct: 222 YQETVQKLFEISSNDALNQGGNKSAKSTKENKGSVNTP---SFTQLALNAQRLRLIPSFN 278

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
            G   + VNIP+  L     GK+ L+S VIVGR DR+TP+++S+++ ++ NP+W +P +I
Sbjct: 279 NG---IFVNIPSYQLYYFREGKLVLQSKVIVGRNDRKTPVMYSKLSNVVVNPHWNVPSTI 335

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN---FIFRQDPGKINA 307
             KD++  LR+DP         ++D KG +     ++W + E  N   +  RQ  G  +A
Sbjct: 336 KNKDLVPKLRKDPILADKLGYEILDGKGNKFSAHSINWAAYEGKNNFPYHIRQKAGDDSA 395

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF+   R  +SGCVRV    +L   LL +   WS   
Sbjct: 396 LGRYKFNMPSSDAIYLHDTPNRGLFSKKNRALSSGCVRVAKADELATLLLAEA-GWSAQR 454

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            ++V+ ++KTT   + ++ PV+  Y+++W     I     DIY  D
Sbjct: 455 KQDVLASKKTTSAPIRSDNPVYLYYVTSWIEGGKIYTL-PDIYQFD 499


>gi|166012265|ref|ZP_02233163.1| YcbB [Yersinia pestis biovar Antiqua str. E1979001]
 gi|165988829|gb|EDR41130.1| YcbB [Yersinia pestis biovar Antiqua str. E1979001]
          Length = 252

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 118/223 (52%), Gaps = 6/223 (2%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++VNIP  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S++++D+
Sbjct: 13  IMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDI 72

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMAS 310
           +   R D  Y + N   ++     +  V     +DW+   P NF +  RQ PG  N++  
Sbjct: 73  VPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGANNSLGR 132

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +  
Sbjct: 133 FKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDARVSS 191

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            VK   TT V +   VPV   Y++AW  +D   QFR DIY  D
Sbjct: 192 KVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYD 234


>gi|89054636|ref|YP_510087.1| peptidoglycan binding domain-containing protein [Jannaschia sp.
           CCS1]
 gi|88864185|gb|ABD55062.1| Peptidoglycan-binding domain 1 [Jannaschia sp. CCS1]
          Length = 531

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 158/311 (50%), Gaps = 13/311 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +  +V +LR RL+  G LD  +  +  +D  ++ AV  FQ+ +G++  G+    T+ A
Sbjct: 209 GATGSAVVQLRNRLMAMGYLD--RSATATYDTRLQQAVMEFQVDNGINADGIAGGDTIRA 266

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +N      + ++ + + R ++ L    G R++ VN+P      +++G+V   +  ++G  
Sbjct: 267 VNRSATEHLSEVILAMER-QRWLNVDRGPRHIFVNLPDFHTRVIDDGEVTFITRSVIGSR 325

Query: 225 DR--QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           DR  +TP     +  ++ NP W +PRSI +  + +++     +L+      +   G+ V 
Sbjct: 326 DRDRRTPEFSDEMEHMVINPSWYVPRSIARGYIPSIMAGGANHLQ------LMSNGRPVN 379

Query: 283 VEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
              VDW+     NF F  RQ PG  NA+   K  F ++ N Y+HD+P+  L  + VR  +
Sbjct: 380 RGAVDWSRVSAGNFPFDLRQPPGPRNALGLVKFMFPNQWNIYLHDSPDQHLMTHDVRAYS 439

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
           +GCVR+ +  +L   LL             ++ + + T V L T +PVH VY ++W   +
Sbjct: 440 AGCVRLDDPFELAYHLLAAQEDDPVTFFNTILNSSRETQVNLQTPLPVHIVYWTSWVDTE 499

Query: 401 SIIQFRDDIYG 411
             + FR+DIYG
Sbjct: 500 GRLNFRNDIYG 510


>gi|310815557|ref|YP_003963521.1| peptidoglycan binding domain-containing protein [Ketogulonicigenium
           vulgare Y25]
 gi|308754292|gb|ADO42221.1| peptidoglycan binding domain-containing protein [Ketogulonicigenium
           vulgare Y25]
          Length = 547

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 158/323 (48%), Gaps = 16/323 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+   +V  LR RL++ G + PS  LS  FD  +   V+ FQ  HGL   G+V + T
Sbjct: 213 LQLGDQGDAVLSLRNRLMLQGYMAPS--LSPVFDQSLLLGVQAFQTAHGLATDGVVGAGT 270

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           L  +N+ +D RI+Q+ V + R  +   + +G R++ VN+         NG    R+  ++
Sbjct: 271 LAELNMGIDARIQQVLVAMER-ARWSNKPLGARHIWVNLADYHTVIRNNGMDEFRTRSVI 329

Query: 222 GR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           G    DR+TP     +N ++ NP W +PRSI+  + +  L+++P  +   N+   D  G+
Sbjct: 330 GARGADRETPEFSDIMNHMVVNPSWHVPRSIVVGEYLPQLQRNPYAVSHINVQ--DGSGR 387

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +    +D+N+    NF F  R+ P + NA+   K  F ++ N Y+HDTP   LF    R
Sbjct: 388 AIDRSLIDFNAYNASNFPFSMREPPSRGNALGLVKFMFPNQWNIYLHDTPSKDLFARETR 447

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL-------ATEVPVHF 390
             + GC+R+ +  D    LL    +  R   +  + T + T V L          +PVH 
Sbjct: 448 AFSHGCIRLADPFDFAYQLLGPQTSDPRGLFQRTLDTGRETRVDLEQPLPVQPQPLPVHL 507

Query: 391 VYISAWSPKDSIIQFRDDIYGLD 413
            Y +        + FR DIYG D
Sbjct: 508 DYRTTVIAPSGAVTFRRDIYGRD 530


>gi|299136140|ref|ZP_07029324.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX8]
 gi|298602264|gb|EFI58418.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX8]
          Length = 604

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 162/325 (49%), Gaps = 17/325 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSV---------AFDAYVESAVKLFQMRHGLDPSG 155
           G S  ++ +L  RL + GD+  +   +          +++A + +AVK +Q RHGL   G
Sbjct: 255 GGSYAALPQLLARLQLEGDVTATDTDTAAASDTAGPRSYNAELVAAVKHYQQRHGLTADG 314

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVG 214
            +  ST++++NVP+++R++QL  +L R + + +  +  R VLVN+P   + A + +  V 
Sbjct: 315 KLTQSTIDSLNVPMEVRVQQLNNSLERWRWMPDNFINPR-VLVNLPEFVVRAYDPDHSVA 373

Query: 215 LRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA-LLRQDPQYLKDNNI 271
            +  ++ G    +  TP+    +  ++F PYW +P SII+K+++  + R    YL D   
Sbjct: 374 FKMKIVDGEAKGNHDTPMFVRSMRYVVFRPYWNVPPSIIKKELLPHIQRSGIGYLADKGY 433

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            +    G    V     +  E   +I RQ PG  N++   K  F +  + YMH TPE  L
Sbjct: 434 EVARNDG--TVVTGYTAHDIEHLRYIVRQKPGPKNSLGLVKFLFPNEYDVYMHSTPELPL 491

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK-TTPVKLATEVPVHF 390
           FN   R  + GCVR+ +   +  W+L+    W    I E +   K    V L T +PV  
Sbjct: 492 FNLTRRDRSHGCVRLEHADQMAAWVLQGQGDWDEDKISEAMNGDKDNKTVNLKTTLPVII 551

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNV 415
            Y +A + +D+ I F  D+YG D  
Sbjct: 552 GYFTATADEDNSIHFFSDLYGYDKA 576


>gi|86148447|ref|ZP_01066737.1| Uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
 gi|85833744|gb|EAQ51912.1| Uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
          Length = 512

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 149/285 (52%), Gaps = 10/285 (3%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FD  ++SA+K FQ  HGL   G+V   T++ +N+  D R+  L +N  R++     +  L
Sbjct: 231 FDQDLQSAIKSFQRMHGLTDDGIVGPDTIKWINMSFDERLTSLALNAERVRLWPRDRDSL 290

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P+  ++  E+G+    S V+VGR  R+TP+L   ++ ++ NP W +P  I+ K
Sbjct: 291 --IVVNVPSFDMKYWEDGEEVFESKVVVGRKSRKTPLLEINLDSVILNPTWNVPWKIMVK 348

Query: 254 DMMALLRQDPQYLKDNNIHMID--EKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMA 309
           D++  ++ D  YL+ +N  +ID     + V   ++DW +    +F +  RQ  G  NA+ 
Sbjct: 349 DILPKVKADESYLETHNFQVIDGWRTMETVDTTDIDWQTINFNSFPYRMRQQAGSRNALG 408

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    ++   Y+HDTP   LFN+  R  +SGC+RV +  +L   L     T  R    
Sbjct: 409 LYKFNTPNKRAIYLHDTPSKGLFNDDFRAYSSGCIRVEHAEELAELLF---ATKVRKVPN 465

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +       T V+L   +PVH +Y +    ++  IQ+R DIY  D 
Sbjct: 466 QSNDLAPNTKVRLKKRIPVHIIYQTVLF-EEGGIQYRGDIYQYDK 509


>gi|256830357|ref|YP_003159085.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256579533|gb|ACU90669.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM
           4028]
          Length = 543

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 187/399 (46%), Gaps = 27/399 (6%)

Query: 40  INESYHSIVNDRFDNFLARVDMGI-DSDIPIISKETIAQT------EKAIAFYQDI---- 88
           I E++     DRFD  LA +   + +  +    +E   Q        +A+A Y+ +    
Sbjct: 136 IQENFTPPAPDRFDP-LAHLQRAVREKRLREAVREAAPQVPLYGRLREALAQYRQLSEDP 194

Query: 89  ----LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
               L +   P LP   L +G S   +  +  RLI  GDL     ++  ++ ++   +  
Sbjct: 195 VFSQLWQSSLPPLPNGKLEIGESYAGMPLVVLRLIALGDLPRETVMTERYEGHIVKGIMD 254

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK--KLLEQKMGLRYVLVNIPA 202
           FQ+RHGL+P G++   T   + V    R+RQ+++++ R++   LL      R + VNIP 
Sbjct: 255 FQVRHGLEPDGVIGRKTYAQLGVTPSARVRQIELSMERLRWTPLLHAP---RMIAVNIPE 311

Query: 203 ASLEA--VENGKVGLRST--VIVGR-VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
             LEA  V+NG V +++T  VI+G  ++ +TP+   R+  I F+PYW +P SI + +++ 
Sbjct: 312 HVLEAYEVQNGTVQVQTTMRVIIGSALNMRTPLFDGRMRSIEFSPYWNVPLSIARSEVVP 371

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVD-WNSPEPPNFIFRQDPGKINAMASTKIEFY 316
            + +DP Y        +   G+ +    +D   +        RQ PG  NA+   K  F 
Sbjct: 372 KILRDPSYFVRQGFEFVAADGQIITTLSMDDLEAVRSGQMRIRQRPGPRNALGDIKFIFP 431

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           ++++ ++H TP   LF    R  + GC+RV + + L  ++L+    W    I E +    
Sbjct: 432 NKDSIFLHHTPTTHLFEKQRRDLSHGCIRVEDPVGLAKFVLQHDQVWGEERIREAMSAGV 491

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           ++ ++L     V   Y +        + F  DIYG D +
Sbjct: 492 SSTLRLREPPQVVLAYNTVQVKNGGRVHFFQDIYGQDKL 530


>gi|110637822|ref|YP_678029.1| hypothetical protein CHU_1418 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280503|gb|ABG58689.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 558

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 164/317 (51%), Gaps = 8/317 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L LG++   +  ++ RL  + + +    L+  FD  ++ ++++FQ   GL  SG +D 
Sbjct: 234 RTLTLGDTCYIISSVKRRLQSTSEYN-FDSLNNTFDEQLQESIRIFQTHVGLHASGKIDK 292

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T++ +N         + VN+ R +  L   +   ++LVNI   +L    +  V    +V
Sbjct: 293 KTIDKLNFTAAEVRGAILVNMERFR-WLPNDLPKEFILVNIADYTLRHFIDKNVVYTESV 351

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           IVGR    TP+  + +  I FNPYW +PRSI  K+++  L+++P YL+ +N+ +   +G 
Sbjct: 352 IVGREYTSTPVFEAMMTYIEFNPYWTVPRSIAVKEILPSLKRNPNYLQSHNMDLF--RGN 409

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
                   +++    NF F  +++PG  N++   K+ F +  + Y+HDTP   LF    R
Sbjct: 410 AQVAIPSSFSNYTAGNFPFTIKENPGPKNSLGQVKLMFPNPYSIYLHDTPGKYLFEQEER 469

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             + GC+R+++ +   + +L      ++  I+++++ +K   + L  ++PV   Y + +S
Sbjct: 470 SFSHGCIRLKDPLKFALHILSKQGV-TQADIDKIIRNKKNYVIPLKEKIPVMLTYFTCYS 528

Query: 398 PKDSI-IQFRDDIYGLD 413
            +  I + F  DIYG D
Sbjct: 529 KRGDIHLYFFKDIYGKD 545


>gi|325293005|ref|YP_004278869.1| hypothetical protein AGROH133_06435 [Agrobacterium sp. H13-3]
 gi|325060858|gb|ADY64549.1| hypothetical protein AGROH133_06435 [Agrobacterium sp. H13-3]
          Length = 645

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 138/275 (50%), Gaps = 10/275 (3%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           VK FQ  +GL   G++  +T+ AM     D RI ++QV + +I+  L   +G RYVL+N 
Sbjct: 362 VKAFQSENGLKADGVIGRATVRAMVGESNDARIAKVQVAMEQIR-WLPADLGQRYVLINQ 420

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PA       +G+      V+VG    QT      I  + FNPYW +P+SII  +M+  LR
Sbjct: 421 PAFMAYYHNDGQEQFGMKVVVGSKANQTYFFQDEIQTVEFNPYWGVPQSIIVNEMLPKLR 480

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI-FRQDPGKINAMASTKIEFYSRN 319
           +DP YL D   + +   G+ V    V+W      N +  RQ P   NA+   KI F + +
Sbjct: 481 RDPSYL-DRLGYEVQVGGRAVSSTSVNWFGST--NAVSVRQPPSSDNALGDLKILFPNAH 537

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             YMHDTP    FN  +R  + GC+R+ +   +   +L      S   + E +   K   
Sbjct: 538 AIYMHDTPAKSFFNRDMRALSHGCIRLVDPRRMAAAVLGT----SVDKVNEQIAAGKNRA 593

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           V++  ++PV+  Y +AW  K   +QF DD+Y  D+
Sbjct: 594 VQVPVKIPVYVAYFTAWPDKAGKVQFFDDVYDRDS 628


>gi|315179999|gb|ADT86913.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
          Length = 517

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 148/286 (51%), Gaps = 9/286 (3%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +   VK FQ  HGL   G++   TL+ +N+ V  R+  L +N  R++    Q   +
Sbjct: 232 YDNSLVEPVKQFQKMHGLKIDGIIGPDTLKWLNMKVPERLALLALNAERMRLWSTQDDTV 291

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P  +L+   +GK    S V+VGRV R TP++ ++++ ++ NP W +P  I+ +
Sbjct: 292 --IVVNVPGYNLKYWYSGKPVFESKVVVGRVTRPTPVMSTKLDSLILNPTWKVPHKIMVE 349

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ + ++D  YL  ++I +I+    +  ++   +DW +  P  F +  RQ  G  NA+ 
Sbjct: 350 DILPMTKRDASYLSRHHIDIIESWKSDQTLDPALIDWQNVNPKTFPYRMRQQAGNQNALG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    ++   Y+HDTP   LFN+  R  +SGC+RV +       LL+         I 
Sbjct: 410 LYKFNTPNKRAIYLHDTPSKHLFNHPTRAFSSGCIRVEHADQFATALLETQGINHSELIP 469

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
                 +  P+K    +PVH +Y + W  +   + +RDDIY LD +
Sbjct: 470 NADDANRAIPLK--KRIPVHIIYQTVWY-EGGEVHYRDDIYRLDRI 512


>gi|254473448|ref|ZP_05086845.1| peptidoglycan-binding domain 1 protein [Pseudovibrio sp. JE062]
 gi|211957564|gb|EEA92767.1| peptidoglycan-binding domain 1 protein [Pseudovibrio sp. JE062]
          Length = 625

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 156/325 (48%), Gaps = 14/325 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISG------DLDPSKGLSVAFDAYVESAVKL---FQMRHGLD 152
           + LG++   V +L +RL   G      D   +    V    Y +  V+L   FQ RHGL 
Sbjct: 284 IRLGDTGGRVAQLEKRLQAEGYAPYYSDYTGTSETEVPPTFYNDDMVELVKDFQKRHGLT 343

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G+V   T  A+N  ++ R  Q+ VNL R++       G RYV VN+    +  +E   
Sbjct: 344 VDGVVGKKTRAALNASLEDRRNQILVNLERMRWDDPLPSG-RYVKVNVAEQMVRVMEGTD 402

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V   +  +VG+    TP+          NP W +P SI   + +  LR++   L    I+
Sbjct: 403 VLYETRSVVGKPRNATPLFSDTFEYAEINPTWGVPWSIATNEYLPKLRKNASALSGTGIN 462

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
           +  + GK V    ++W++     F +  RQ  G+ NA+ + K  F +++N Y+HDTP   
Sbjct: 463 VY-KNGKRVDPTAINWSNVSKRKFGYQLRQKAGRKNALGAVKYMFPNKHNIYLHDTPSKR 521

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LFN   R  + GC+RV++       LL  +   SR  +E++    KT  +KL   VPVH 
Sbjct: 522 LFNKDQRAFSHGCIRVQDPFTFGEVLLSGS-GHSRAKMEKLRARGKTVRLKLTETVPVHL 580

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNV 415
            Y +A++  D  +QFR+DIY  D  
Sbjct: 581 RYYTAFAGVDGELQFREDIYKQDKA 605


>gi|327189298|gb|EGE56466.1| hypothetical protein RHECNPAF_642003 [Rhizobium etli CNPAF512]
          Length = 653

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 137/277 (49%), Gaps = 15/277 (5%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ--VNLMRIKKLLEQKMGLRYVLVN 199
           V+ FQ   GL   G++  +T+ AM    D    ++   V  M   + L + +G RYV++N
Sbjct: 369 VEDFQKERGLKADGVIGQATVRAM-TGGDTNASKIDKLVVAMEQARWLPEDLGSRYVMIN 427

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
            PA       +GK  L   V+VG  + QT      I  + FNP+W +P+SII  +M+  L
Sbjct: 428 QPAYMAYYHNDGKEQLSMRVVVGGKNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLPKL 487

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           R DP YL D   + ++  G  V    VDW      N   RQ P   NA+   KI F + +
Sbjct: 488 RSDPNYL-DQLGYEVEVNGHAVASSSVDWYG-STDNVSVRQPPSSDNALGELKILFPNSH 545

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK---TRK 376
             YMHDTP    F   +R  + GCVR+ N   +   +L  T       +++V K   + +
Sbjct: 546 AIYMHDTPSKSFFKRDMRALSHGCVRLSNPRAMAAAVLGTT-------VDDVAKQIASGQ 598

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              V++  ++PV+  Y +AW  KD ++++ DD+YG D
Sbjct: 599 NHAVRVPQKIPVYVSYFTAWPNKDGVVEYFDDVYGRD 635


>gi|237757093|ref|ZP_04585533.1| peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690747|gb|EEP59915.1| peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 506

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 164/319 (51%), Gaps = 18/319 (5%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V++LR+ L I G  D +    +  D  +ES VK FQ    L+  G++   TL  +N P++
Sbjct: 194 VKKLRQLLYIYGFYDGNTNSYIYDDELLES-VKRFQESRNLEADGVIGVKTLNELNRPLN 252

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD----R 226
             I  +++N+ + + L E     R + VNIP+  L+  E+    L + VIVG+      R
Sbjct: 253 ELIDIIKINMEKYRWLPENLAESR-IEVNIPSFELKYYEDNTEILSTEVIVGKNYEEDFR 311

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
            TPI + +I +I  NPYW +P+ I  KD++  ++ +P++L+D +  +    G+EV  +++
Sbjct: 312 PTPIYYGKIEKITINPYWYVPKKIAAKDILKKIKSNPRFLEDFSFKVF-YNGQEVDYKKI 370

Query: 287 DWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           +W      NF F   Q PG  N +   KI F +    Y+HDTP   LF +  R  +SGC+
Sbjct: 371 NWWEYNENNFGFTLIQSPGNKNFLGRIKITFSNPFQVYLHDTPFKELFKHKKRAFSSGCI 430

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           RV + + L  ++L    +     I   + + KT  +    ++ V+  Y +A    D+I  
Sbjct: 431 RVNDPLSLTSYILNKDKS----EILNYIDSNKTIGLTPCKDIYVYIFYFTALVKNDTIY- 485

Query: 405 FRDDIYGLD----NVHVGI 419
           F +D+Y  D    N+ +GI
Sbjct: 486 FYEDLYNFDIKILNIMLGI 504


>gi|254363167|ref|ZP_04979216.1| hypothetical protein MHA_2750 [Mannheimia haemolytica PHL213]
 gi|110735335|gb|ABG89238.1| periplasmic protein precursor [Mannheimia haemolytica]
 gi|153095061|gb|EDN75612.1| hypothetical protein MHA_2750 [Mannheimia haemolytica PHL213]
          Length = 510

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 142/282 (50%), Gaps = 11/282 (3%)

Query: 137 YVESAVKLFQMRHGLD-PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           Y ++A ++  M  G   P      +  E           +L +N  R++ +     G   
Sbjct: 218 YRDTAQRVLAMAGGSSAPKAKKGKAVTEVAGGGNGASFYKLALNAQRLRIIPSFNNG--- 274

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VNIP+  L    +G + L+S VIVGR DR+TP+++S+++ ++ NP W +P SI+ KD+
Sbjct: 275 IFVNIPSYQLYYFRDGNLALQSKVIVGREDRRTPVMYSKLSNVVVNPPWNVPTSIMTKDI 334

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NSPEPPNFIFRQDPGKINAMAST 311
           +  L +DP Y    +  ++D  G ++    V+W    N+   P +  RQ  G  +A+   
Sbjct: 335 IPKLARDPGYADRASFEILDSSGNKINPRSVNWSQYLNAKSSP-YRIRQKAGDDSALGRY 393

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LLK+   W      +V
Sbjct: 394 KFNMPSSDAIYLHDTPNRGLFGKTGRALSSGCVRVEKSDELATILLKEA-GWGSDKKNQV 452

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           + ++KTT  ++ ++ PV+  Y++AW  +   +Q   DIY  D
Sbjct: 453 LGSKKTTSAQIRSDNPVYLYYVTAWV-EGGKVQTLPDIYNFD 493


>gi|171056700|ref|YP_001789049.1| peptidoglycan-binding domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170774145|gb|ACB32284.1| Peptidoglycan-binding domain 1 protein [Leptothrix cholodnii SP-6]
          Length = 516

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 164/350 (46%), Gaps = 14/350 (4%)

Query: 77  QTEKAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           Q  +A+A Y+ +     W    P L  R L    +   +  L  RL + GDL     + V
Sbjct: 159 QLRQALAQYRALGEHPAWAQKLPPLRGRKLEPLQAWDGLPLLAGRLQVLGDLPADVPVPV 218

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
             +  + +AV+ FQ RHGL   G+V  +TL A+ V    R RQ+ + L R++    Q +G
Sbjct: 219 RHEGALVAAVQAFQRRHGLGDDGVVGRATLAALAVTPAQRARQIALTLERLRWTPLQ-LG 277

Query: 193 LRYVLVNIPAASLEAVENGK----VGLRSTVIVGR-VDRQTPILHSRINRIMFNPYWVIP 247
            R ++VN+P   L A E       V L   VIVG+ +D  TP+    +  I F+PYW +P
Sbjct: 278 PRMIVVNVPEFVLRAYETRDDRIDVRLEMKVIVGKALDTPTPLFTEEMRFIEFSPYWNVP 337

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEPPNFIFRQDPGKI 305
           RSI   +++  L+ +P Y        +   G+    F +E   ++        RQ PG  
Sbjct: 338 RSIAGAELVPRLQSEPAYFTRQGFEFVGRDGRVSAGFGDE-QLDAVLRGELRIRQRPGPN 396

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NA+   K  F + +  Y+H TP P LF    R  + GC+RV+  + L  ++L+D P W  
Sbjct: 397 NALGDIKFVFPNNDAIYLHHTPSPGLFERDRRDFSHGCIRVQEPVALAKFVLQDQPGWDE 456

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             I E +   ++  ++L   VPV   Y +    +     F  D+YG D +
Sbjct: 457 ARIVEAMARGQSRTLRLDRPVPVLIAYGTVLV-RQGRPHFLADVYGNDQL 505


>gi|218709906|ref|YP_002417527.1| hypothetical protein VS_1919 [Vibrio splendidus LGP32]
 gi|218322925|emb|CAV19102.1| conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 518

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 149/285 (52%), Gaps = 10/285 (3%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FD  +++A+K FQ  HGL   G+V   T++ +N+  D R+  L +N  R++     +  L
Sbjct: 237 FDQDLQTAIKSFQRMHGLTDDGIVGPDTIKWINMSFDERLTSLALNAERVRLWPRDRDSL 296

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P+  ++  E+G+    S V+VGR  R+TP+L   ++ ++ NP W +P  I+ K
Sbjct: 297 --IVVNVPSFDMKYWEDGEEVFESKVVVGRKSRKTPLLEINLDSVILNPTWNVPWKIMVK 354

Query: 254 DMMALLRQDPQYLKDNNIHMID--EKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMA 309
           D++  ++ D  YL+ +N  +ID     + V   ++DW +    +F +  RQ  G  NA+ 
Sbjct: 355 DILPKVKADESYLETHNFQVIDGWRTMETVDTTDIDWQTINFNSFPYRMRQQAGSRNALG 414

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    ++   Y+HDTP   LFN+  R  +SGC+RV +  +L   L     T  R    
Sbjct: 415 LYKFNTPNKRAIYLHDTPSKGLFNDDFRAYSSGCIRVEHAEELAELLFA---TKVRKVPN 471

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +       T V+L   +PVH +Y +    ++  IQ+R DIY  D 
Sbjct: 472 QSNDLAPNTKVRLKKRIPVHIIYQTVLF-EEGGIQYRGDIYQYDK 515


>gi|328543832|ref|YP_004303941.1| peptidoglycan binding domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326413576|gb|ADZ70639.1| Putative peptidoglycan binding domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 639

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 134/275 (48%), Gaps = 8/275 (2%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDL-RIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           VK FQ  + L P G+V  +T+ A+    +  +I +L++ L R  + L + +G R V +N 
Sbjct: 351 VKAFQKENRLTPDGIVGKATIRALVGDSNADKIAKLELALER-SRWLPEDLGSRRVFINQ 409

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PA +   VE+GK  L   V+VG    QT   + +I  + +NPYW +P SII  + +  L 
Sbjct: 410 PAFTATYVESGKAPLAMRVVVGTKANQTSFFYDQIETVEYNPYWGVPYSIIVNEKLPKLA 469

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIEFYSR 318
            DP YL      +    GK +    VDW++          RQ PG  NA+   KI F ++
Sbjct: 470 ADPGYLDKIGYEVTTASGKPIPSASVDWHAVATKKLSVNVRQRPGSDNALGELKILFPNK 529

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +  YMHDTP   LFN  VR  + GCVR+ +   +   +L      S+ ++   +   K  
Sbjct: 530 HAIYMHDTPSKSLFNKDVRAFSHGCVRLSDPRAMAAAVLGK----SKDYVASRIAGGKNE 585

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +   +PV+  Y +AW   D  I +  D+Y  D
Sbjct: 586 SEDVTGVIPVYVAYFTAWPETDGTIGYYGDVYDRD 620


>gi|163803521|ref|ZP_02197391.1| GTP cyclohydrolase II [Vibrio sp. AND4]
 gi|159172697|gb|EDP57548.1| GTP cyclohydrolase II [Vibrio sp. AND4]
          Length = 521

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 147/297 (49%), Gaps = 10/297 (3%)

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           G LD    L   +D  +E AV  FQ  HGL   G++  +TL  +N     R+  L +N  
Sbjct: 229 GHLDTESRL---YDDNLELAVMEFQRIHGLKQDGVIGPNTLRWVNFSPQQRLHSLALNAE 285

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R +   +++  +  V VN+P   +    +G+    S V+VG+  R+TPI+   ++ ++ N
Sbjct: 286 RSRIWSKKRDNV--VFVNVPGYEVTYWHDGRPLFESKVVVGKASRKTPIMTGTMDSVILN 343

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPNFIF- 298
           P W +P  I+ KD++  ++++P YL ++NI +I        ++   ++W +  P  F + 
Sbjct: 344 PTWNVPWKIMVKDIIPKVKRNPMYLIEHNIQIIRSWSSREVIDPTTINWATVNPKTFPYR 403

Query: 299 -RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ  G  NA+   K    +    Y+HDTP   LFN   R  +SGCVRV +   L   L 
Sbjct: 404 MRQSSGSHNALGLYKFNMPNPQAIYLHDTPSKNLFNEDRRAFSSGCVRVEHADQLAELLF 463

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           K     +R   +     R  T V L   + VH +Y +AW  ++  + +RDDIY  D+
Sbjct: 464 KTQGLEARLERKRQSGRRSNTSVPLTERIQVHIIYQTAWL-EEGTLYYRDDIYQYDH 519


>gi|42522720|ref|NP_968100.1| putative periplasmic protein YcbB [Bdellovibrio bacteriovorus
           HD100]
 gi|39573916|emb|CAE79093.1| putative periplasmic protein YcbB [Bdellovibrio bacteriovorus
           HD100]
          Length = 577

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 180/361 (49%), Gaps = 29/361 (8%)

Query: 79  EKAIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
           ++ +A+++ I + GGW ++ +  + L  GN   ++  +R RL   G   PS G    +DA
Sbjct: 203 KQLLAYFRSIQTAGGWSQIKLAKKSLRQGNQDPAIPAIRGRLQSLGYAVPSTG--DIYDA 260

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            ++  ++  Q  +G+   G++ +  +  +N  V  R+ QL+VN+ +++  L + M  R+V
Sbjct: 261 ELKRVIEDVQGVNGMGVDGVIGNEVMTFLNTSVADRVFQLEVNMEKLR-WLPKAMESRHV 319

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            VN+     +  + G+  +    I G+  R+TP+L + ++ +  NP W  P SII KD +
Sbjct: 320 FVNLATTEFQFFDEGRKIMHFKTINGQSYRRTPVLRNMLSFVELNPTWTAPESIIFKDKI 379

Query: 257 ALLR-QDPQ-YLKDNNIHMIDEK-GKEVFVEEVDWNSPEPPNF--IFRQDPGKINAMAST 311
             LR +D Q YL+ + + +I +  GKEV   +    S    NF  + RQDP + NA+ S 
Sbjct: 380 NTLRGKDGQEYLRKHRMRLIRKSDGKEVIPSDELLQSLSRSNFPYLLRQDPWRKNALGSI 439

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL------KDTPT--- 362
           K    +  + Y+H T  P LF+   R  +SGCVR+ +      ++L      K T T   
Sbjct: 440 KFPLPNEWSIYLHHTDNPDLFDESKRHLSSGCVRLEDPFTFAEYILRNNVAVKSTQTDDY 499

Query: 363 WSRYHIEEVVKTRKTTP----------VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
           W +  +E  V   K+            + L   VPV+ +Y++    +D  ++F  D+YG 
Sbjct: 500 WPKDKLESFVPPEKSEAYVDRENWEKRIHLKVPVPVYLMYLTVDRAQDGAVRFVKDVYGQ 559

Query: 413 D 413
           D
Sbjct: 560 D 560


>gi|84393105|ref|ZP_00991870.1| Uncharacterized protein conserved in bacteria [Vibrio splendidus
           12B01]
 gi|84376262|gb|EAP93145.1| Uncharacterized protein conserved in bacteria [Vibrio splendidus
           12B01]
          Length = 512

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 148/285 (51%), Gaps = 10/285 (3%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FD  +++A+K FQ  HGL   G+V   T++ +N+  D R+  L +N  R++     +  L
Sbjct: 231 FDRDLQTAIKSFQRMHGLTDDGIVGPDTIKWINMSFDDRLTSLALNAERVRLWPRDRDSL 290

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P+  ++  E+G+    S V+VGR  R+TP+L   ++ ++ NP W +P  I+ K
Sbjct: 291 --IVVNVPSFDMKYWEDGEEVFESKVVVGRKSRKTPLLEINLDSVILNPTWNVPWKIMVK 348

Query: 254 DMMALLRQDPQYLKDNNIHMID--EKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMA 309
           D++  ++ D  YL  +N  +ID     + V   E+DW +    +F +  RQ  G  NA+ 
Sbjct: 349 DILPKVKADESYLDTHNFQVIDGWRTMETVDTTEIDWQTINFNSFPYRMRQQAGSRNALG 408

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    ++   Y+HDTP   LFN+  R  +SGC+RV +  +L   L     T  R    
Sbjct: 409 LYKFNTPNKRAIYLHDTPSKGLFNDDFRAYSSGCIRVEHAEELAELLF---ATKVRKVPN 465

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +       T V+L   +PVH +Y +    ++  IQ+R DIY  D 
Sbjct: 466 QSDDLAPNTKVRLKKRIPVHIIYQTVLF-EEGGIQYRGDIYQYDK 509


>gi|156974988|ref|YP_001445895.1| hypothetical protein VIBHAR_02710 [Vibrio harveyi ATCC BAA-1116]
 gi|156526582|gb|ABU71668.1| hypothetical protein VIBHAR_02710 [Vibrio harveyi ATCC BAA-1116]
          Length = 530

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 146/297 (49%), Gaps = 10/297 (3%)

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           G LD    L   +D  +E AV  FQ  HGL   G++  +TL  +N     R+  L +N  
Sbjct: 238 GHLDTETTL---YDENLELAVMEFQRIHGLKQDGIIGPNTLRWINFSPQQRLHSLALNAE 294

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R +   +++  +  V VN+P   +    +G+    S V+VG+  R+TPI+   ++ ++ N
Sbjct: 295 RSRIWSKERDNV--VFVNVPGYEVTYWHDGQPLFESKVVVGKASRKTPIMTGTMDSVILN 352

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPNFIF- 298
           P W +P  I+ KD++  ++++P YL ++NI +I        ++   ++W +  P  F + 
Sbjct: 353 PTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFPYR 412

Query: 299 -RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ  G  NA+   K    +    Y+HDTP   LFN   R  +SGCVRV +   L   L 
Sbjct: 413 MRQSSGSHNALGLYKFNMPNPQAIYLHDTPSKNLFNQDRRAFSSGCVRVEHADQLAELLF 472

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           K      R   +     R  T V L   + VH +Y +AW  ++  + +RDDIY  D+
Sbjct: 473 KTQGLEERLAKKRQSGRRSNTSVPLTERIQVHIIYQTAWL-EEGTLYYRDDIYQYDH 528


>gi|260768291|ref|ZP_05877225.1| hypothetical protein VFA_001342 [Vibrio furnissii CIP 102972]
 gi|260616321|gb|EEX41506.1| hypothetical protein VFA_001342 [Vibrio furnissii CIP 102972]
          Length = 517

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 148/286 (51%), Gaps = 9/286 (3%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +   VK FQ  HGL   G++   TL+ +N+ V  R+  L +N  R++    Q   +
Sbjct: 232 YDNSLVEPVKQFQKMHGLKIDGIIGPDTLKWLNMKVPERLALLALNAERMRLWTTQDDTV 291

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P  +L+   +GK    S V+VGRV R TP++ ++++ ++ NP W +P  I+ +
Sbjct: 292 --IVVNVPGYNLKYWYSGKPVFESKVVVGRVTRPTPVMSTKLDSLILNPTWNVPHKIMVE 349

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ + ++D  YL  ++I +I+    +  ++   +DW +  P  F +  RQ  G  NA+ 
Sbjct: 350 DILPMTKRDASYLSRHHIDIIESWKSDQTLDPALIDWQNVNPKTFPYRMRQQAGNQNALG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    ++   Y+HDTP   LFN+  R  +SGC+RV +       LL+         I 
Sbjct: 410 LYKFNTPNKRAIYLHDTPSKHLFNHPTRAFSSGCIRVEHADQFATTLLETQGINDSELIP 469

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
                 +  P+K    +PVH +Y + W  +   + +RDDIY LD +
Sbjct: 470 NPDAANRAIPLK--KRIPVHIIYQTVWY-EGGEVHYRDDIYRLDRI 512


>gi|87120480|ref|ZP_01076374.1| hypothetical protein MED121_22022 [Marinomonas sp. MED121]
 gi|86164123|gb|EAQ65394.1| hypothetical protein MED121_22022 [Marinomonas sp. MED121]
          Length = 561

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 173/362 (47%), Gaps = 23/362 (6%)

Query: 79  EKAIAFYQDILSRGGWPELPIR-----PLHLGNSSVSVQRLRERLIISGDLDPSKGL--S 131
           +K + +YQDI ++    +  IR     PL LG+    + +LR RL+  GD+  S      
Sbjct: 205 QKWLVYYQDISAK----QKDIRVTAGVPLSLGDQGPRIAQLRARLVQLGDIRFSTRTIQE 260

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FD  ++ A+  FQ RH L   G   S T+E +N+P+ LR +Q+  NL R +  L  ++
Sbjct: 261 DKFDKKLKQALINFQRRHDLTADGHAGSQTIEMLNIPISLRAKQIAYNLERWR-WLPTEL 319

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               + V++    +  + N +      V++G+ +R+TP+    +  ++ NP W +P  I 
Sbjct: 320 EAERIWVDLTDYKVHTILNDQHSTMK-VVIGKKERKTPVFKGEMTYMVTNPTWRVPHRIA 378

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDE---KGKEVFVEEVDWN--SPEPPNFIFRQDPGKIN 306
           Q+ ++     +P YL +    +        KE+    +DW   +PE   + F Q P + N
Sbjct: 379 QESLLPKAHANPNYLIEQGYKVYSSWTIGAKELDPSLIDWRKVTPENLKYRFEQTPDEGN 438

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+   K  F +RN  Y+HDTP   LF    R  +SGC+R+         L+  +      
Sbjct: 439 ALGLYKFMFPNRNEIYLHDTPAKHLFKESNRAFSSGCIRLEKPQLFANNLVAGSKQVEA- 497

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD---NVHVGIIPLP 423
            ++  +++++T  V L  ++PV+ VY +    ++ +  FR DIY  D      +G  P P
Sbjct: 498 -LQNAIQSKETKVVSLPKQLPVYIVYFTVVPDRNGMPGFRKDIYERDILMEEAMGYFPSP 556

Query: 424 ED 425
            +
Sbjct: 557 AN 558


>gi|153835596|ref|ZP_01988263.1| cell wall degradation protein [Vibrio harveyi HY01]
 gi|148867813|gb|EDL67053.1| cell wall degradation protein [Vibrio harveyi HY01]
          Length = 515

 Score =  139 bits (351), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 146/297 (49%), Gaps = 10/297 (3%)

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           G LD    L   +D  +E AV  FQ  HGL   G++  +TL  +N     R+  L +N  
Sbjct: 223 GHLDTETTL---YDENLELAVMEFQRIHGLKQDGIIGPNTLRWINFSPQQRLHSLALNAE 279

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R +   +++  +  V VN+P   +    +G+    S V+VG+  R+TPI+   ++ ++ N
Sbjct: 280 RSRIWSKERDNV--VFVNVPGYEVTYWHDGQPLFESKVVVGKASRKTPIMTGTMDSVILN 337

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPNFIF- 298
           P W +P  I+ KD++  ++++P YL ++NI +I        ++   ++W +  P  F + 
Sbjct: 338 PTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFPYR 397

Query: 299 -RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ  G  NA+   K    +    Y+HDTP   LFN   R  +SGCVRV +   L   L 
Sbjct: 398 MRQSSGSHNALGLYKFNMPNPQAIYLHDTPSKNLFNQDRRAFSSGCVRVEHADQLAELLF 457

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           K      R   +     R  T V L   + VH +Y +AW  ++  + +RDDIY  D+
Sbjct: 458 KTQGLEERLAKKRQSGRRSNTSVPLTERIQVHIIYQTAWL-EEGTLYYRDDIYQYDH 513


>gi|158422063|ref|YP_001523355.1| hypothetical protein AZC_0439 [Azorhizobium caulinodans ORS 571]
 gi|158328952|dbj|BAF86437.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 649

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 163/318 (51%), Gaps = 15/318 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  LR RL     L  +      +DA +  AV  FQ   GL+  G+V  ST
Sbjct: 317 LRPGDMDARVPALRARL----GLKSATASDRLYDADLARAVAAFQGASGLNADGVVGPST 372

Query: 162 LEAMNV---PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           LE +N    P + R   +  N+ R +  L + +G  +V+VNIP   +  V++GK   ++ 
Sbjct: 373 LEVLNRVENPAERRA-DIIANMERWR-WLPRDLGSVHVMVNIPEFVVRVVDDGKTIHQTR 430

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           V+VG+ + QTP+L   +  ++ NPYW IP SI +K+M+  L++DP +L    + ++ + G
Sbjct: 431 VVVGKPENQTPLLTHDMEYVVLNPYWNIPPSIARKEMLPNLQRDPYFLARQGMEVV-KNG 489

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           + V    V+W       + FRQ PG+ NA+   K  F + ++ Y+HDTP   LF N  R 
Sbjct: 490 RVVDPGTVNWAQGT-GGYSFRQPPGERNALGRIKFMFPNDHSVYLHDTPSKALFANDRRA 548

Query: 339 ETSGCVRVRNIIDL-DVWLLKDTP--TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            + GC+RV++ +   +V      P   W+   I +++   +   + L   +PVH VY + 
Sbjct: 549 YSHGCIRVQDPLKFAEVIFNIGMPGQGWTDEKIGKMLGGAERY-LTLKQRIPVHLVYFTT 607

Query: 396 WSPKDSIIQFRDDIYGLD 413
           +      +  R+D+YG +
Sbjct: 608 FVDDSGRLVSREDVYGTN 625


>gi|167855604|ref|ZP_02478364.1| hypothetical protein HPS_03656 [Haemophilus parasuis 29755]
 gi|167853295|gb|EDS24549.1| hypothetical protein HPS_03656 [Haemophilus parasuis 29755]
          Length = 516

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 143/286 (50%), Gaps = 17/286 (5%)

Query: 137 YVESAVKLFQ------MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           Y E+  KLF+      +  G + S         ++N P      QL +N  R++ +    
Sbjct: 222 YQETVQKLFEISSNDALNQGGNKSAKSTKENKGSVNTP---SFTQLALNAQRLRLIPSFN 278

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
            G   + VNIP+  L     GK+ L+S VIVGR DR+TP+++S+++ ++ NP W +P +I
Sbjct: 279 NG---IFVNIPSYQLYYFREGKLVLQSKVIVGRNDRKTPVMYSKLSNVVVNPPWNVPSTI 335

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN---FIFRQDPGKINA 307
             KD++  LR+DP         ++D KG +     ++W + E  N   +  RQ  G  +A
Sbjct: 336 KNKDLVPKLRKDPILADKLGYEILDGKGNKFSAHSINWAAYEGKNNFPYHIRQKAGDDSA 395

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF+   R  +SGCVRV    +L   LL +   WS   
Sbjct: 396 LGRYKFNMPSSDAIYLHDTPNRGLFSKKNRALSSGCVRVAKADELATLLLAEA-GWSAQR 454

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            ++V+ ++KTT   + ++ PV+  Y+++W     I     DIY  D
Sbjct: 455 KQDVLASKKTTSAPIRSDNPVYLYYVTSWIEGGKIYTL-PDIYQFD 499


>gi|269961715|ref|ZP_06176076.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833580|gb|EEZ87678.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 530

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 182/396 (45%), Gaps = 32/396 (8%)

Query: 24  LSLVEKPIHASVLDEIINESYHSI-VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
           LSL+   I    LDE +NE    + +++ F+   A +      + P+       Q ++ +
Sbjct: 160 LSLLSNEITVGKLDEFLNELRSPLQMDESFNTAYASLSTYAKFEFPLY------QQDQRL 213

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           A   D                L + +  + R++   +  G LD    L   +D  +E AV
Sbjct: 214 ARVGD---------------ELFDKASMIARMQIVGVDVGHLDTETTL---YDENLELAV 255

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
             FQ  HGL   G++  +T+  +N     R+  L +N  R +   +++  +  V VN+P 
Sbjct: 256 MEFQRIHGLKQDGIIGPNTIRWINFSPQQRLHSLALNAERSRIWAKERDNV--VFVNVPG 313

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             +    +G+    S V+VG+  R+TPI+   ++ ++ NP W +P  I+ KD++  ++++
Sbjct: 314 YEVTYWHDGQPLFESKVVVGKASRKTPIMTGTLDSVILNPTWNVPWKIMVKDIIPKVKRN 373

Query: 263 PQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSR 318
           P YL  +NI +I        ++   ++W +  P  F +  RQ  G  NA+   K    + 
Sbjct: 374 PMYLMQHNIQIIRSWTSREIIDPTTINWATVNPRTFPYRMRQSSGSHNALGLYKFNMPNP 433

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
              Y+HDTP   LFN   R  +SGCVRV +   L   L K      R   +     R  T
Sbjct: 434 QAIYLHDTPSKNLFNQDRRAFSSGCVRVEHADQLAELLFKTQGLEERLAKKRQNGRRSNT 493

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            V L+  + VH +Y +AW  ++  + +RDDIY  D+
Sbjct: 494 SVPLSERIQVHIIYQTAWL-EEGTLYYRDDIYQYDD 528


>gi|241204955|ref|YP_002976051.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858845|gb|ACS56512.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 637

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 143/288 (49%), Gaps = 15/288 (5%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ--VNLMRIKKLLE 188
           S+ +   + S V+ FQ   GL   G++  +T+ AM    D    ++   +  M   + L 
Sbjct: 342 SIDYSPDIVSLVEEFQKERGLKADGVIGQATVRAM-TGGDTNASKIDKLIVAMEQARWLP 400

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           + +G RYV++N PA  +    +GK  L   V+VG  + QT      I  + FNP+W +P+
Sbjct: 401 EDLGSRYVMINQPAYMVYYHNDGKEQLSMRVVVGGKNNQTYFFDDEIETVEFNPFWGVPQ 460

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SII  +M+  LR DP YL D   + ++  G  V    VDW      N   RQ P   NA+
Sbjct: 461 SIIINEMLPKLRSDPNYL-DQLGYEVEVNGHAVASSSVDWYG-STNNVSVRQPPSSDNAL 518

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              KI F + +  YMHDTP    F   +R  + GCVR+ +   +   +L  T       +
Sbjct: 519 GELKILFPNSHAIYMHDTPSKSFFKRDMRALSHGCVRLADPRAMAAAVLGTT-------V 571

Query: 369 EEVVK---TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           ++V K   + +   V++  ++PV+  Y +AW  KD ++++ DD+YG D
Sbjct: 572 DDVAKQIASGQNHAVRVPQKIPVYVSYFTAWPNKDGVVEYFDDVYGRD 619


>gi|254507080|ref|ZP_05119218.1| cell wall degradation protein [Vibrio parahaemolyticus 16]
 gi|219550075|gb|EED27062.1| cell wall degradation protein [Vibrio parahaemolyticus 16]
          Length = 517

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 150/285 (52%), Gaps = 9/285 (3%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +  A+K FQ  HGL   G++   T + +NV +  R+  L +N  RI+     K  +
Sbjct: 232 YDMSLVPAIKQFQKLHGLKEDGVIGPETAKWLNVSMKDRLTTLALNAERIRYWPSDKDTI 291

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P+  +     GK    S V+VGR  R TP++ + ++ ++ NP W +P  I+ +
Sbjct: 292 --IVVNVPSYEMTYWHGGKNVFESKVVVGRQARPTPLMITNLDTLILNPTWNVPWKIMVE 349

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNFIFR--QDPGKINAMA 309
           D++  +++DP+YL   +I ++ + G +  +  +++DW++  P +F +R  Q  G  NA+ 
Sbjct: 350 DIIPKMKEDPEYLTRQHIEILPKWGSKERIDPQQIDWDAMNPKSFPYRMTQLSGNQNALG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    ++   Y+HDTP   LFN   R  +SGC+RV +       LL+           
Sbjct: 410 LYKFNTPNKRAIYLHDTPSKGLFNEPQRAFSSGCIRVEHADVFASRLLEHQGLTKSKLSA 469

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           E  ++ K  P++    +PVH +Y +AW  ++    +R+DIY LD 
Sbjct: 470 EADRSNKKIPLR--KRIPVHIIYQTAWF-EEGKTHYREDIYQLDT 511


>gi|308049138|ref|YP_003912704.1| peptidoglycan-binding domain 1 protein [Ferrimonas balearica DSM
           9799]
 gi|307631328|gb|ADN75630.1| Peptidoglycan-binding domain 1 protein [Ferrimonas balearica DSM
           9799]
          Length = 492

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 159/325 (48%), Gaps = 18/325 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V  +R +L   GD  P +  S+ +D  + +AV+ FQ RHGL   G++   T   
Sbjct: 167 GEHHAEVAPIRRQLARLGDY-PGRTDSLRYDGGMVAAVQQFQRRHGLKADGVIGPRTRHW 225

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           + +    R R L   L+R +          ++LVNIP   L+ V++G+    + V+VG  
Sbjct: 226 LRLDYQERARLLARALVR-QAHDRHYFAPDHLLVNIPDYRLDWVQDGQSRFSARVVVGMP 284

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV- 283
            R+TP +HS +  ++ NPYW +P SI++KD++  +  D  Y++ N   ++D + + +++ 
Sbjct: 285 SRRTPRMHSELRSVVVNPYWNVPNSIMRKDLLPRILTDGSYVQRNRFEVLDSENRPLWLS 344

Query: 284 -EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            +E+   + +   +  RQ PG  N++   K    +    Y+HDTP+  LF    R  +SG
Sbjct: 345 PDELSRLAYQGFPYRLRQRPGPGNSLGRYKFHLINSQAIYLHDTPKQRLFERSTRAFSSG 404

Query: 343 CVRVRNIIDLDVWLLK----DTPTWSRYHIEEVVKTRKTTPVKLATEVP--VHFVYISAW 396
           C+RV N   L   LL+    + P   RY          + P  L  + P  V+ VY SAW
Sbjct: 405 CIRVENADLLADLLLQAQSPEGPPLKRY-------LNASGPRWLTLQQPLAVYLVYWSAW 457

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIP 421
                  QFR DIY L+   +G  P
Sbjct: 458 M-DGGRAQFRSDIYELEKAAIGRQP 481


>gi|261493954|ref|ZP_05990462.1| hypothetical protein COK_2352 [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261310386|gb|EEY11581.1| hypothetical protein COK_2352 [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 518

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 11/282 (3%)

Query: 137 YVESAVKLFQMRHGLD-PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           Y ++A ++  M  G   P      +  E           +L +N  R++ +     G   
Sbjct: 226 YRDTAQRVLAMAGGSSAPKAKKGKAVTEVAGGGNGASFYKLALNAQRLRIIPSFNNG--- 282

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VNIP+  L    +G + L+S VIVGR DR+TP++ S+++ ++ NP W +P SI+ KD+
Sbjct: 283 IFVNIPSYQLYYFRDGNLALQSKVIVGREDRRTPVMDSKLSNVVVNPPWNVPTSIMTKDI 342

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NSPEPPNFIFRQDPGKINAMAST 311
           +  L +DP Y    +  ++D  G ++    V+W    N+   P +  RQ  G  +A+   
Sbjct: 343 IPKLARDPGYADRASFEILDSSGNKINPRSVNWSQYLNAKSSP-YRIRQKAGDDSALGRY 401

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LLK+   W      +V
Sbjct: 402 KFNMPSSDAIYLHDTPNRGLFGKTGRALSSGCVRVEKSDELATILLKEA-GWGSDKKNQV 460

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           + ++KTT  ++ ++ PV+  Y++AW  +   +Q   DIY  D
Sbjct: 461 LGSKKTTSAQIRSDNPVYLYYVTAWV-EGGKVQTLPDIYNFD 501


>gi|315633943|ref|ZP_07889232.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
 gi|315477193|gb|EFU67936.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
          Length = 487

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 132/245 (53%), Gaps = 7/245 (2%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
           + + +L +N  R++ L   + G   + VNIP+  L    +G+V L S VIVG+  R+TP+
Sbjct: 229 VELHRLAINAQRLRILPVFQDG---IFVNIPSYELNYYRDGQVILSSRVIVGQSSRKTPV 285

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
           + SR++ ++ NP W  P  +I +D++  +R+DP Y+  +   +ID  G  +    +DW +
Sbjct: 286 MSSRLSNVVVNPPWNAPTRLINEDIIPKVRKDPSYIYRHGYTIIDGSGNTIDPYTIDWEN 345

Query: 291 PEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                F +  RQ P   +A+ + K    S    Y+HDTP+  LF N  R  +SGCVRV  
Sbjct: 346 MSAKRFPYRLRQAPSDNSALGNYKFNMPSSEAIYLHDTPKRNLFGNKNRALSSGCVRVEK 405

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
              L   LLK+   W+    + V+K++KTT   + ++ PV   Y++AW  KD +     D
Sbjct: 406 SDQLATILLKEA-GWTDETKQNVLKSKKTTSAGIKSDNPVFLYYVTAWVDKDQVHTL-PD 463

Query: 409 IYGLD 413
           IYG D
Sbjct: 464 IYGYD 468


>gi|332885569|gb|EGK05815.1| hypothetical protein HMPREF9456_02079 [Dysgonomonas mossii DSM
           22836]
          Length = 592

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 138/266 (51%), Gaps = 10/266 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSV-------AFDAYVESAVKLFQMRHGLDPSGM 156
           LG+ +  +  + +RL ++G+   ++  S+         D  +  A+ +F+ ++       
Sbjct: 236 LGDKNKHISEIAQRLALTGEYVIAESDSIRDDSSEMMLDENLLEAINIFRKKNSYPEEKE 295

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           +   T++A+N P+D  + +LQ N+ R +  + +    +++ VN+ +A L A E   + L 
Sbjct: 296 IGKLTIDALNRPLDYYLEKLQANMERYRWKMTKAKHNKHIEVNVASAYLTATEQDSLPLI 355

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
             V VG    +TP+L S I+ +  NP W IP SI QK++  L ++DP Y+K +N+ +   
Sbjct: 356 MKVCVGTATNKTPLLQSDISYLNLNPIWNIPTSIAQKEVAVLQKKDPTYIKRHNMKLY-R 414

Query: 277 KGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
            GKEV +  ++W   +P  F +  RQ PG+ NA+   K  F +  + Y+HDTP    F  
Sbjct: 415 NGKEVDITTINWKEVDPSKFSYTIRQSPGESNALGLVKFMFSNAFSVYLHDTPSKAAFGR 474

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDT 360
             R  + GCVRV+   DL  + +  T
Sbjct: 475 KNRAVSHGCVRVQKPFDLAFFCMSTT 500


>gi|261494761|ref|ZP_05991240.1| hypothetical protein COI_0554 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261309578|gb|EEY10802.1| hypothetical protein COI_0554 [Mannheimia haemolytica serotype A2
           str. OVINE]
          Length = 510

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 11/282 (3%)

Query: 137 YVESAVKLFQMRHGLD-PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           Y ++A ++  M  G   P      +  E           +L +N  R++ +     G   
Sbjct: 218 YRDTAQRVLAMAGGSSAPKAKKGKAVTEVAGGGNGASFYKLALNAQRLRIIPSFNNG--- 274

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VNIP+  L    +G + L+S VIVGR DR+TP++ S+++ ++ NP W +P SI+ KD+
Sbjct: 275 IFVNIPSYQLYYFRDGNLALQSKVIVGREDRRTPVMDSKLSNVVVNPPWNVPTSIMTKDI 334

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NSPEPPNFIFRQDPGKINAMAST 311
           +  L +DP Y    +  ++D  G ++    V+W    N+   P +  RQ  G  +A+   
Sbjct: 335 IPKLARDPGYADRASFEILDSSGNKINPRSVNWSQYLNAKSSP-YRIRQKAGDDSALGRY 393

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LLK+   W      +V
Sbjct: 394 KFNMPSSDAIYLHDTPNRGLFGKTGRALSSGCVRVEKSDELATILLKEA-GWGSDKKNQV 452

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           + ++KTT  ++ ++ PV+  Y++AW  +   +Q   DIY  D
Sbjct: 453 LGSKKTTSAQIRSDNPVYLYYVTAWV-EGGKVQTLPDIYNFD 493


>gi|222148534|ref|YP_002549491.1| hypothetical protein Avi_2078 [Agrobacterium vitis S4]
 gi|221735520|gb|ACM36483.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 614

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 139/275 (50%), Gaps = 9/275 (3%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDL-RIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           V+ +Q   GL P G++  +T+  M    +  +I +L V + +++  L   +G RYV +N 
Sbjct: 332 VESYQKERGLKPDGVIGQATVRTMVGHSNAEKIEKLVVAMEQLR-WLPADLGPRYVFINQ 390

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PA       + +  +   V+VG    QT    + I  + FNPYW +PRSII  +M+  LR
Sbjct: 391 PAFEAYYFNDRQQQIAMKVVVGAPQHQTFFFQNMIQTVEFNPYWGVPRSIIVNEMLPKLR 450

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           QDP YL D   + +  KG++V   +VDW +    +   RQ P   NA+   KI F + + 
Sbjct: 451 QDPSYL-DRLGYEVSYKGRKVASSQVDWYTTS--DVDVRQPPSSDNALGDLKILFPNAHA 507

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP    F   +R  + GCVR+     +   ++  T       I+  + + +   V
Sbjct: 508 IYMHDTPAKSFFKRDMRALSHGCVRLAEPRVMAAAVMGTTVE----DIDAQIASGQNRAV 563

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           ++  + PV+  Y +AW  KD ++++ DD+YG D  
Sbjct: 564 QVPQKFPVYVAYFTAWPDKDGVVRYYDDVYGRDEA 598


>gi|37680299|ref|NP_934908.1| hypothetical protein VV2115 [Vibrio vulnificus YJ016]
 gi|37199046|dbj|BAC94879.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
           YJ016]
          Length = 535

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 147/291 (50%), Gaps = 18/291 (6%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +E AVK FQ  HGL   G+V   TL+ +N+    R+  + +N  R +   E++  L
Sbjct: 249 YDTQLELAVKQFQKMHGLTQDGVVGPITLKWLNMTPAQRLHSMALNSERSRLWPEERDLL 308

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             VLVN+P   ++    G+    S V+VGR  R+TPI+  +++ ++ NP W +P++I+ K
Sbjct: 309 --VLVNVPGYEMKFWYKGEEIFESKVVVGRKSRKTPIMVGKMDGVVLNPVWNVPKTIMVK 366

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNFIF--RQDPGKINAMA 309
           D++  ++ D  +L   NI +I+    +  V  + +DW      +F +  RQ  G  NA+ 
Sbjct: 367 DILPKVKYDQSFLTKQNIEIIEGWDSQTAVNPQTIDWTKVSLKSFPYKMRQLAGDKNALG 426

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    ++   ++HDTP   LF    R  +SGCVRV+N     + LLK         +E
Sbjct: 427 LYKFNIPNKRAIFLHDTPSQSLFQEDSRAFSSGCVRVQNADQFALQLLKTQG------LE 480

Query: 370 E-----VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           E       +    T + L   +PVH +Y + W   +  + +RDDIY  D V
Sbjct: 481 EELSNLATRQEANTMIPLKRRIPVHIIYQTVWFEGEE-LNYRDDIYQYDLV 530


>gi|190892061|ref|YP_001978603.1| hypothetical protein RHECIAT_CH0002473 [Rhizobium etli CIAT 652]
 gi|190697340|gb|ACE91425.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 636

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 137/277 (49%), Gaps = 15/277 (5%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ--VNLMRIKKLLEQKMGLRYVLVN 199
           V+ FQ   GL   G++  +T+ AM    D    ++   V  M   + L + +G RYV++N
Sbjct: 352 VEDFQKERGLKADGVIGQATVRAM-TGGDTNASKIDKLVVAMEQARWLPEDLGSRYVMIN 410

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
            PA       +GK  L   V+VG  + QT      I  + FNP+W +P+SII  +M+  L
Sbjct: 411 QPAYMAYYHNDGKEQLSMRVVVGGKNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLPKL 470

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           R DP YL D   + ++  G  V    VDW      N   RQ P   NA+   KI F + +
Sbjct: 471 RSDPNYL-DQLGYEVEVNGHAVASSSVDWYG-STDNVSVRQPPSSDNALGELKILFPNSH 528

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK---TRK 376
             YMHDTP    F   +R  + GCVR+ N   +   +L  T       +++V K   + +
Sbjct: 529 AIYMHDTPSKSFFKRDMRALSHGCVRLSNPRAMAAAVLGTT-------VDDVAKQIASGQ 581

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              V++  ++PV+  Y +AW  K+ ++++ DD+YG D
Sbjct: 582 NHAVRVPQKIPVYVSYFTAWPNKEGVVEYFDDVYGRD 618


>gi|222086217|ref|YP_002544749.1| hypothetical protein Arad_2690 [Agrobacterium radiobacter K84]
 gi|221723665|gb|ACM26821.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 633

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 139/273 (50%), Gaps = 8/273 (2%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           V+ FQ   GL   G++  S++ AM     D +I++L + + +++  L  ++G RYVL+N 
Sbjct: 350 VEDFQKEKGLTSDGVIGQSSVRAMVGENSDAKIQKLVIAMEQLR-WLPNELGSRYVLINQ 408

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PA  +    N +  L   V+VG    QT     +I  + FNP+W +P+SII  +M+  LR
Sbjct: 409 PAFMVYYHNNNQEQLSMRVVVGGKQHQTFFFEDQIQTVEFNPFWGVPQSIIINEMLPKLR 468

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
            DP YL D   + ++  G+ V    VDW      +   RQ P   NA+   KI F + + 
Sbjct: 469 ADPNYL-DRMGYQVEVGGRAVASSSVDWYG-STKSVAVRQPPSSDNALGELKILFPNSHA 526

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   F   +R  + GCVR+ +   +   +L  T       I + +   +   V
Sbjct: 527 IYMHDTPQKSFFKKDMRALSHGCVRLADPRAMAAAVLNTTVA----DIAKQIAGGQNKAV 582

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            +  +VP++  Y +AW  KD ++Q+ +D+Y  D
Sbjct: 583 AVPQKVPIYIAYFTAWPNKDGVVQYFNDVYDRD 615


>gi|326424107|ref|NP_761768.2| L,D-transpeptidase YcbB [Vibrio vulnificus CMCP6]
 gi|319999488|gb|AAO11295.2| L,D-transpeptidase YcbB [Vibrio vulnificus CMCP6]
          Length = 535

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 147/291 (50%), Gaps = 18/291 (6%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +E AVK FQ  HGL   G+V   TL+ +N+    R+  + +N  R +   E++  L
Sbjct: 249 YDTQLELAVKQFQKMHGLTQDGVVGPITLKWLNMTPAQRLHSMALNSERSRLWPEERDLL 308

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             VLVN+P   ++    G+    S V+VGR  R+TPI+  +++ ++ NP W +P++I+ K
Sbjct: 309 --VLVNVPGYEMKFWYKGEEIFESKVVVGRKSRKTPIMVGKMDGVVLNPVWNVPKTIMVK 366

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNFIF--RQDPGKINAMA 309
           D++  ++ D  +L   NI +++    +  V  + +DW      +F +  RQ  G  NA+ 
Sbjct: 367 DILPKVKYDQSFLTKQNIEIVEGWDSQTAVNPQTIDWTKVSLKSFPYKMRQLAGDKNALG 426

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    ++   ++HDTP   LF    R  +SGCVRV+N     + LLK         +E
Sbjct: 427 LYKFNIPNKRAIFLHDTPSKSLFQEDSRAFSSGCVRVQNADQFALQLLKTQG------LE 480

Query: 370 E-----VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           E       +    T + L   +PVH +Y + W   +  + +RDDIY  D V
Sbjct: 481 EELSNLATRQEANTMIPLKRRIPVHIIYQTVWFEGEE-LNYRDDIYQYDLV 530


>gi|91975886|ref|YP_568545.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris BisB5]
 gi|91682342|gb|ABE38644.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris BisB5]
          Length = 716

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 153/318 (48%), Gaps = 28/318 (8%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV- 169
           V +LR +L I+ D D     S  +DA V  AV+ FQ    L P+G++D  T++ +N P  
Sbjct: 348 VPQLRAKLGITEDAD-----SSTYDAKVAEAVRKFQRSADLKPTGVLDDRTVKVLNTPKR 402

Query: 170 DLRIRQLQVNLMRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           D  I  + VN+ R + L  Q     +G  YV++NIP  +L+ ++NG     + V+ G+  
Sbjct: 403 DRSIDTIIVNMERWRWLPRQLGAASIGNAYVILNIPDYTLKVMQNGAQVWTTRVVTGKPG 462

Query: 226 RQ-TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           +  TP+L   +  I  NP W +P SII  + +  L QDP  L    + M   +   + + 
Sbjct: 463 KHATPLLTETMKYITVNPTWNVPPSIINNEYLPALAQDPTVLDRMGLKMSRNRDGSIHIS 522

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                          Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+
Sbjct: 523 ---------------QPPGEANALGRVRFNFPNKFLVYQHDTPDKNLFARDERAFSHGCM 567

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           RV+N       LL  T    RY  E++  +  R    +K  T +PV+  Y +A+   D  
Sbjct: 568 RVQNPDQYAAALLNITMPNERYTPEKIRSMYGRSEIDLKFPTPIPVNITYQTAFVDDDGK 627

Query: 403 IQFRDDIYGLDNVHVGII 420
           +Q R DIYG D+  + I+
Sbjct: 628 LQIRKDIYGRDSAMLAIL 645


>gi|260914201|ref|ZP_05920674.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260631834|gb|EEX50012.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 511

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 133/246 (54%), Gaps = 8/246 (3%)

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           ++ ++ +N  R++ + E   GL    VNIP+  LE   +G++ L S VIVG+  R+TP++
Sbjct: 256 KMYKMAINAQRLRVIPEFTDGL---FVNIPSYQLEYYRDGQLVLTSRVIVGKKARKTPVM 312

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
           +S+++ ++ NP W  P  +I +D++  +R+DP Y+  N   +ID KG  V    +DW + 
Sbjct: 313 YSKLSNVVVNPPWNAPVRLINEDIIPKVRKDPSYIYRNGYTIIDGKGNSVDPYTIDWENM 372

Query: 292 EPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
               F +  RQ PG  +A+ + K    S +  Y+HDTP   LF    R  +SGCVRV   
Sbjct: 373 TAKKFPYRLRQAPGD-SALGNFKFNMPSSDAIYLHDTPNRGLFGKKDRALSSGCVRVEKS 431

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
             L   LLK+   WS      V+++RKTT   +A++ PV   Y++ W  K        DI
Sbjct: 432 DQLATILLKEAG-WSEERKRSVLQSRKTTSANVASDNPVFLYYVTMWVNKGQTHTL-PDI 489

Query: 410 YGLDNV 415
           YG D+ 
Sbjct: 490 YGYDST 495


>gi|326795030|ref|YP_004312850.1| ErfK/YbiS/YcfS/YnhG family protein [Marinomonas mediterranea MMB-1]
 gi|326545794|gb|ADZ91014.1| ErfK/YbiS/YcfS/YnhG family protein [Marinomonas mediterranea MMB-1]
          Length = 562

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 181/348 (52%), Gaps = 18/348 (5%)

Query: 79  EKAIAFYQDILSRGGWPELPIR---PLHLGNSSVSVQRLRERLIISGDLDPS--KGLSVA 133
           +K + +YQ++  +   P++ +    PL LG+    V +LR RLI  GD+  S  K     
Sbjct: 206 QKWLVYYQELADKE--PDIKVNVGVPLTLGDEGPRVAQLRARLIQLGDIRFSTRKVNEDQ 263

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FD  ++ A+  FQ RH L   G   S T++ +N+P+  R++Q+  NL R +  L  ++  
Sbjct: 264 FDERLKDALINFQRRHHLTADGAAGSKTIQTLNIPLKERVKQINYNLERWR-WLPSRLEA 322

Query: 194 RYVLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
             + V++    +    NG+   +R  V++G+  R+TP+ + ++  ++ NP W +P  I +
Sbjct: 323 DRIWVDLTDYKVHTHLNGETQSMR--VVIGKPARKTPVFYGKMTYMVTNPTWRVPHRIAR 380

Query: 253 KDMMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPP--NFIFRQDPGKINA 307
           ++++  ++++P YL  +   +        K++    ++W + +    ++ F Q+    NA
Sbjct: 381 ENLLPKIKENPDYLAKHGYKVFANWSASAKQLDPTTINWKAIDQSKLSYRFEQNADDGNA 440

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F ++N+ Y+HDTP   LF  V R  +SGCVR+ +  +    LL+ + +  +  
Sbjct: 441 LGLYKFMFPNKNDIYLHDTPAKHLFKEVDRAYSSGCVRLEHPDEFAELLLEGSDSEDK-- 498

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           + E + + +T  + L   +PV+ VY +     + + +FR+D+Y  D +
Sbjct: 499 MNEAMNSGETKVITLPQYLPVYLVYFTVVPNDNGMPEFRNDVYKRDKL 546


>gi|288957909|ref|YP_003448250.1| peptidoglycan-binding domain 1 protein [Azospirillum sp. B510]
 gi|288910217|dbj|BAI71706.1| peptidoglycan-binding domain 1 protein [Azospirillum sp. B510]
          Length = 434

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 157/312 (50%), Gaps = 11/312 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           + LG+S   V RL +RL+  G L P+  ++  F A ++ AVK FQ+   + P G+V + T
Sbjct: 84  MKLGSSGERVGRLAQRLVELGLL-PADKVAELFTADIDHAVKAFQLAQRMKPDGLVGAGT 142

Query: 162 LEAMN-VPVDLR--IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             A++  P +    +RQ  V +   +      +    ++VN+   +   V  G+  L   
Sbjct: 143 RAALDRTPAEAAALMRQSAVAMRSFRDTAPDNV----LVVNLTDQTTTLVRGGEEELTMR 198

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
            IVGR  R+TP+L  RI  I+ NP W +P +++++D + +LR        N I  +D  G
Sbjct: 199 AIVGRPSRETPLLTDRITHIIVNPTWTVPPTVLKEDKLPMLRAKGTPGIQNAIVYLD--G 256

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           +EV  E VDW+   P      Q PG  NA+   +    +  + Y+H T EP LF   +R 
Sbjct: 257 QEVAPETVDWHDVTPGRVRIVQQPGNHNALGRFRFNLTNPYDIYLHGTNEPRLFARELRS 316

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVR+ +   L   LL+ + + +   I+ ++  ++   VKL T +PV FVY  A   
Sbjct: 317 ISSGCVRLEDPRRLAELLLQGS-SVTPERIDRMLDKQQPQWVKLPTPMPVQFVYWIATVE 375

Query: 399 KDSIIQFRDDIY 410
            D  ++   DIY
Sbjct: 376 ADGAVRLHPDIY 387


>gi|148978885|ref|ZP_01815205.1| hypothetical protein VSWAT3_22280 [Vibrionales bacterium SWAT-3]
 gi|145962083|gb|EDK27369.1| hypothetical protein VSWAT3_22280 [Vibrionales bacterium SWAT-3]
          Length = 519

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 147/289 (50%), Gaps = 18/289 (6%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FD  ++ A K FQ  HG+   G++   T++ +N+  D R+  L +N  R +     +  L
Sbjct: 238 FDRDLQIATKAFQRMHGITADGIIGPDTIKWINMGFDDRLTSLALNAERARLWPRNRDSL 297

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P+  ++  E+G+    S V+VGR  R+TP+L  +++ ++ NP W +P  I+ K
Sbjct: 298 --IVVNVPSFDMKYWEDGEEVFESKVVVGRKSRKTPLLEIKLDSVILNPTWNVPWKIMVK 355

Query: 254 DMMALLRQDPQYLKDNNIHMID--EKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMA 309
           D++  ++ D  YL+ +N  +ID     + V   E+DW +    +F +  RQ  G  NA+ 
Sbjct: 356 DILPKVKADESYLETHNFQVIDGWRSMETVDTTEIDWQTINFNSFPYRMRQQAGSSNALG 415

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL----KDTPTWSR 365
             K    ++   Y+HDTP   LFN+  R  +SGC+RV +  +L   L     K  P  S 
Sbjct: 416 LYKFNTPNKRAIYLHDTPSKSLFNDDFRAYSSGCIRVEHAEELAELLFATKVKKVPNQSD 475

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                       T V+L   +PVH +Y +    ++  IQ+R DIY  D 
Sbjct: 476 -------DLAPNTKVRLKKRIPVHIIYQTVLFGEEG-IQYRGDIYQYDK 516


>gi|320156749|ref|YP_004189128.1| L,D-transpeptidase YcbB [Vibrio vulnificus MO6-24/O]
 gi|319932061|gb|ADV86925.1| L,D-transpeptidase YcbB [Vibrio vulnificus MO6-24/O]
          Length = 518

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 147/291 (50%), Gaps = 18/291 (6%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +E AVK FQ  HGL   G+V   TL+ +N+    R+  + +N  R +   E++  L
Sbjct: 232 YDTQLELAVKQFQKMHGLTQDGVVGPITLKWLNMTPAQRLHSMALNSERSRLWPEERDLL 291

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             VLVN+P   ++    G+    S V+VGR  R+TPI+  +++ ++ NP W +P++I+ K
Sbjct: 292 --VLVNVPGYEMKFWYKGEEIFESKVVVGRKSRKTPIMVGKMDGVVLNPVWNVPKTIMVK 349

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNFIF--RQDPGKINAMA 309
           D++  ++ D  +L   NI +++    +  V  + +DW      +F +  RQ  G  NA+ 
Sbjct: 350 DILPKVKYDQSFLTKQNIEIVEGWDSQTAVNPQTIDWTKVSLKSFPYKMRQLAGDKNALG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    ++   ++HDTP   LF    R  +SGCVRV+N     + LLK         +E
Sbjct: 410 LYKFNIPNKRAIFLHDTPSKSLFQEDSRAFSSGCVRVQNADQFALQLLKTQG------LE 463

Query: 370 E-----VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           E       +    T + L   +PVH +Y + W   +  + +RDDIY  D V
Sbjct: 464 EELSNLATRQEANTMIPLKRRIPVHIIYQTVWFEGEE-LNYRDDIYQYDLV 513


>gi|333008910|gb|EGK28370.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-272]
 gi|333020220|gb|EGK39490.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-227]
          Length = 550

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 8/240 (3%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ 
Sbjct: 309 PAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRL 368

Query: 186 L-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  E   G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 369 LPTELSTG---IMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQ 300
            +P ++ +KD++  +R DP YL+ +   ++        ++  +VDW++    N  F F+Q
Sbjct: 426 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 485

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 486 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545


>gi|163759687|ref|ZP_02166772.1| hypothetical protein HPDFL43_10047 [Hoeflea phototrophica DFL-43]
 gi|162283284|gb|EDQ33570.1| hypothetical protein HPDFL43_10047 [Hoeflea phototrophica DFL-43]
          Length = 619

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 137/283 (48%), Gaps = 8/283 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  +   VK FQ   GL P G+V  +T  AM  +    +I ++++ + R  + L   + 
Sbjct: 327 YDEELVQLVKDFQKELGLKPDGVVGPATRRAMVGITNADKIEKVRLAMER-ARWLPGVLA 385

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            R V +N PA +      GK  L   V+VG+   QT      I  + FNPYW +P+SII 
Sbjct: 386 SRRVFINQPAYTASYYNGGKQELSMRVVVGKRSNQTYFFDDEIELVEFNPYWGVPQSIIF 445

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI-FRQDPGKINAMAST 311
            +M+  LR DP YL D + + +   GK V    V+W++    + +  RQ PG  NA+   
Sbjct: 446 NEMVPKLRNDPGYL-DRSGYEVTIGGKRVSSSNVNWSAVGAGSRVGVRQRPGSSNALGEL 504

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           KI F + +  YMHDTP   LF    R  + GC+R+++   +   +L  T       I   
Sbjct: 505 KIMFPNSHAIYMHDTPSKSLFERDTRAFSHGCIRLQDPRAMAAKVLGTTVE----DIGSY 560

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +   +  PV +   +PVH  Y +AW  +   + +  DIYG D 
Sbjct: 561 IAGGQHKPVDVPENIPVHVAYFTAWPNETGAVSYYADIYGRDG 603


>gi|13470744|ref|NP_102313.1| hypothetical protein mll0533 [Mesorhizobium loti MAFF303099]
 gi|14021487|dbj|BAB48099.1| mll0533 [Mesorhizobium loti MAFF303099]
          Length = 626

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 145/280 (51%), Gaps = 18/280 (6%)

Query: 142 VKLFQMRHGLDPSGMVDSST--LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +K  Q++ G+   G++   T  L A     D R+ ++QV L  ++  L   +G   V +N
Sbjct: 341 IKAVQVKEGMKGDGVIGPRTVALLAGTSKAD-RLLKVQVALEELR-WLPSDLGSPRVFIN 398

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
            PA +   ++NG+  L++ V+VGRV  QT   + +I ++ F+PYW +P+SII  +M+  L
Sbjct: 399 QPAFTASYIDNGEEKLKTRVVVGRVTNQTAFFYDQIKQVDFHPYWGVPQSIIVNEMLPRL 458

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDW-----NSPEPPNFIFRQDPGKINAMASTKIE 314
           R DP YL      + D +GK +    V+W     N P    +  RQ P + NA+   KI 
Sbjct: 459 RSDPGYLDRAGYEVTDSRGKRIPSSAVNWGAYGANIP----YSVRQQPSEANALGELKIL 514

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           F +++  YMHDTP+   F   +R  + GCVR+++   +   +L  +  +    + E +K 
Sbjct: 515 FPNKHAIYMHDTPQKSFFKQDMRALSHGCVRLQDPRGMAAAVLGTSVDY----VAEKLKH 570

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             +T   +  ++PV+  Y +AW      +++  D+Y  D+
Sbjct: 571 GHSTE-DVTRKIPVYVAYFTAWPDMSGKVEYFSDVYDRDS 609


>gi|269967085|ref|ZP_06181153.1| putative amidase [Vibrio alginolyticus 40B]
 gi|269828344|gb|EEZ82610.1| putative amidase [Vibrio alginolyticus 40B]
          Length = 477

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 153/306 (50%), Gaps = 8/306 (2%)

Query: 114 LRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           L ER+ I G D+     ++  +D  +E A+K FQ  HGL   G++  +T+  +N     R
Sbjct: 173 LIERMEIVGVDVSYLDLVTEEYDEQLELAIKEFQRIHGLKEDGVIGPNTIRWINFSPQER 232

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           +  L +N  R +   +++  +  V VN+P   +    +G+    S V+VGR  R+TPI+ 
Sbjct: 233 LHLLALNSERSRIWSKERDNV--VFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMS 290

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNS 290
             ++ ++ NP W +P +I+ KD++  ++++P YL ++NI +I        ++   ++W +
Sbjct: 291 VALDSVILNPTWNVPWTIMVKDIIPKVKRNPMYLINHNIQIIRSWTSNEIIDPTTINWAT 350

Query: 291 PEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             P  F +  RQ  G  NA+   K    +    Y+HDTP   LF    R  +SGCVRV +
Sbjct: 351 VNPRTFPYRMRQASGLQNALGLYKFNMPNPQAIYLHDTPSKNLFEQDRRAFSSGCVRVEH 410

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
              L   L K      R   +     R  T V L   + VH +Y +AW  ++  + +RDD
Sbjct: 411 ADQLAELLFKTQGLEERLAKKRESSRRSNTSVPLGERIQVHIIYQTAWL-EEGTLYYRDD 469

Query: 409 IYGLDN 414
           IY  D+
Sbjct: 470 IYKYDH 475


>gi|188995993|ref|YP_001930244.1| Peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931060|gb|ACD65690.1| Peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 506

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 157/309 (50%), Gaps = 14/309 (4%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V++LR+ L I G  + +    V  D  +ES VK FQ    L+  G++   TL  +N P++
Sbjct: 194 VKKLRQLLYIYGFYNGNTNSDVYDDELLES-VKRFQESRNLEADGIIGVKTLSELNRPLN 252

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD----R 226
             I  +++N+ + + L E  +    + +NIP+  L+  EN    L + VIVG+      R
Sbjct: 253 ELIDIIKINMEKYRWLPEN-LAENRIEINIPSFELKYYENDIEVLSTEVIVGKNYEEDFR 311

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
            TPI + +I +I  NPYW +P+ I  KD++  ++ +P++L+D    +    G+EV  +++
Sbjct: 312 PTPIYYGKIEKITLNPYWYVPKKIAAKDILKKIKSNPRFLEDFGFKVF-YNGQEVDYKKI 370

Query: 287 DWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           +W      NF F   Q PG  N +   +I F +    Y+HDTP   LF    R  +SGC+
Sbjct: 371 NWRKYNESNFNFTLIQSPGDKNFLGRIRITFSNPFQVYLHDTPFKELFKQKRRAFSSGCI 430

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           R+ + + L  ++L       +  I   + + KT  +  +  + V+  Y +A    D+I  
Sbjct: 431 RINDALSLTSYILNK----DKNEIVNFINSNKTLDLVPSKNIYVYIFYFTALVKNDTIY- 485

Query: 405 FRDDIYGLD 413
           F +D+Y  D
Sbjct: 486 FYEDLYNFD 494


>gi|91227204|ref|ZP_01261663.1| putative amidase [Vibrio alginolyticus 12G01]
 gi|91188732|gb|EAS75020.1| putative amidase [Vibrio alginolyticus 12G01]
          Length = 513

 Score =  136 bits (343), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 153/306 (50%), Gaps = 8/306 (2%)

Query: 114 LRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           L ER+ I G D+     ++  +D  +E A+K FQ  HGL   G++  +T+  +N     R
Sbjct: 209 LIERMEIVGVDVSYLDLVTEEYDEQLELAIKEFQRIHGLKEDGVIGPNTIRWINFSPQER 268

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           +  L +N  R +   +++  +  V VN+P   +    +G+    S V+VGR  R+TPI+ 
Sbjct: 269 LHLLALNSERSRIWSKERDNV--VFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMS 326

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNS 290
             ++ ++ NP W +P +I+ KD++  ++++P YL ++NI +I        ++   ++W +
Sbjct: 327 VALDSVILNPTWNVPWTIMVKDIIPKVKRNPMYLINHNIQIIRSWTSNEIIDPTTINWAT 386

Query: 291 PEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             P  F +  RQ  G  NA+   K    +    Y+HDTP   LF    R  +SGCVRV +
Sbjct: 387 VNPRTFPYRMRQASGLQNALGLYKFNMPNPQAIYLHDTPSKNLFEQDRRAFSSGCVRVEH 446

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
              L   L K      R   +     R  T V L   + VH +Y +AW  ++  + +RDD
Sbjct: 447 ADQLAELLFKTQGLEERLAKKRESSRRSNTSVPLGERIQVHIIYQTAWL-EEGTLYYRDD 505

Query: 409 IYGLDN 414
           IY  D+
Sbjct: 506 IYKYDH 511


>gi|256820616|ref|YP_003141895.1| ErfK/YbiS/YcfS/YnhG family protein [Capnocytophaga ochracea DSM
           7271]
 gi|256582199|gb|ACU93334.1| ErfK/YbiS/YcfS/YnhG family protein [Capnocytophaga ochracea DSM
           7271]
          Length = 571

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 21/324 (6%)

Query: 105 GNSSVSVQRLRERLIISG-----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           G +   V+ LR  L   G      +DP +      D+ +  A+K FQ  +GL P G +  
Sbjct: 244 GYTDPEVESLRNALAKKGFGSVPKIDPQE-----VDSTLIWALKRFQRSNGLIPDGSLGI 298

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            TL  +N+    +   L++N+ R++ +    +G  Y++VNIP   L       +  ++ V
Sbjct: 299 QTLNRLNMNKARQRDLLRLNMERMR-VFNNDLGDDYIIVNIPDYKLFLYHKDSLIYQTKV 357

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM--ALLRQDPQYLKDNNIHMIDEK 277
           +VGR    TPI    I  I F P W +P+SII+K+M+   LL++DP+  K+    M  E 
Sbjct: 358 VVGRAQSSTPIFTDSIRSIEFRPTWSVPQSIIRKEMIPQMLLQEDPERYKNRGYTMY-EN 416

Query: 278 GKEVFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           GK +   EVDW +P      F F + P + N++   K    +  + Y+HDTP   LF   
Sbjct: 417 GKVIDPLEVDWTNPLVHKRAFYFVEAPSERNSLGLVKFLLNNNMSIYLHDTPSKYLFERE 476

Query: 336 VRFETSGCVRVRNIIDLDVWLLK---DTPTWSRYHIEEVVKTRKTTP--VKLATEVPVHF 390
            R  + GCVRV+N   L  +LLK   D  +W+   +++ +   K     VKL T+  ++ 
Sbjct: 477 QRALSHGCVRVQNPSQLAYYLLKNEGDGKSWTEEKVKDFMNNNKRNQYRVKLNTKYMINI 536

Query: 391 VYISAWSPKDSIIQFRDDIYGLDN 414
           +Y +    K      ++DIY LDN
Sbjct: 537 LYYTISVDKKGEATIKNDIYDLDN 560


>gi|325104437|ref|YP_004274091.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
 gi|324973285|gb|ADY52269.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
          Length = 493

 Score =  136 bits (343), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 22/313 (7%)

Query: 122 GDLDPSKGLSVAFDA-----YVESAVKLFQMR-----HGLDPSGMVDSSTLEAMNVPVDL 171
           G ++P K     FD+     ++ES   L QM        L P   V ++    M   +  
Sbjct: 166 GAINPKKLYGRYFDSIERPDFIESQKMLEQMDLISFLRDLQPKNAVYTALQAEMQKGLSG 225

Query: 172 RIRQ-LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV------ 224
             ++ + +NL R++  +      +++LVNIP   L   +N K  L   V VG        
Sbjct: 226 DQKERIFLNLERLRWKISD-FPEKFILVNIPEFKLRLYDNHKEALAMKVCVGATANPPYS 284

Query: 225 ----DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
               + +TP+L   I+R+  NP W IP+SI  K++M  L ++P YL ++N+   D+ G  
Sbjct: 285 KNGQNHETPVLSGTIDRMQINPVWNIPKSIAGKEIMTKLVENPSYLDESNMVAYDKSGAA 344

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           V  + VDW+S    ++ F+Q+PG  N++   K  FY+    Y+HDTP   +FN   R  +
Sbjct: 345 VNAQSVDWSSASVDDYSFKQNPGSDNSLGRVKFIFYNPYAIYLHDTPAKQMFNEKNRAVS 404

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
            GCVRV   + L  +LL D     +   E      ++  VK+   V V+  Y +A++   
Sbjct: 405 HGCVRVEQPLKLVDFLLNDQKESEKVKSEITGSDNESRWVKVKDPVKVYLAYYTAFADDK 464

Query: 401 SIIQFRDDIYGLD 413
             I + DD+YG D
Sbjct: 465 DGITWVDDVYGYD 477


>gi|119383985|ref|YP_915041.1| peptidoglycan binding domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119373752|gb|ABL69345.1| Peptidoglycan-binding domain 1 protein [Paracoccus denitrificans
           PD1222]
          Length = 535

 Score =  136 bits (342), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 7/346 (2%)

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           +A+A    +++ G  P +       G S  +V  LR RL   G      G  + +D  + 
Sbjct: 181 QALARQSQLVAPGDAPRVAEGLWREGTSDPAVAALRVRLASVGFAAAPMGSPLTYDGALA 240

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            AV  +Q   GL   G+    T+  +N         + V L R++ +    +  R+V VN
Sbjct: 241 QAVAAYQKAAGLPADGVAGPRTVARLNRGTGPEAEAILVALERMRWMRGHDLNARHVWVN 300

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQ--TPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           +P  +    ENG+    + V++G+ +R+  TP     +  ++ NP W +PRSI  K+ + 
Sbjct: 301 LPEFNARIYENGREVFETRVVIGKANREFETPEFSETMKYMVVNPRWNVPRSITVKEYLP 360

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEF 315
            L+ +   +   ++ ++D  G  +  + +D+       F +R  Q P   NA+   K  F
Sbjct: 361 RLQANRHAV--GHLDVVDGAGNVIARDRIDFRKYSAKTFPYRMRQKPSDDNALGQVKFMF 418

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +  N Y+HDTP   LFN   R  + GC+RV   +DL   LLK           + +K+ 
Sbjct: 419 PNPWNIYLHDTPTKHLFNQSSRAYSHGCIRVGRPVDLAHELLKGQVESPEAVFSKALKSG 478

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGII 420
           + T + L   VPVH VY +A+  +   I+   DIYG D  VH  ++
Sbjct: 479 RETYLNLRPPVPVHLVYFTAFPDESGQIRRFPDIYGRDALVHAALV 524


>gi|332878616|ref|ZP_08446336.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332683517|gb|EGJ56394.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 568

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 161/319 (50%), Gaps = 13/319 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G ++  +++LR+ L   G    ++      D+ +   V+ FQ   GL P G++   TL  
Sbjct: 241 GYTAPVIEKLRKGLKQKGFEAIAEADPQTVDSTLIRTVQRFQESKGLTPDGVLGKQTLYF 300

Query: 165 MNVPVDLRIRQL-QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           +N+  D R R L ++N+ R++ +    +G  Y +VNIP   L   E   V   + V+VG+
Sbjct: 301 INMN-DTRTRDLLKLNMERMR-VFNNYLGDHYAIVNIPDFKLLLFEKDSVLFETRVVVGK 358

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHMIDEKGKEV 281
               TPI    I  + F P W +P+SII+K+M+  +  + +P+  K+    M  E GK+V
Sbjct: 359 SATSTPIFTDTIQYVEFRPTWSVPQSIIKKEMIPQIVSQANPEKYKNRGYTMY-ENGKKV 417

Query: 282 FVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
              +V+WN P      F F + P   N++   K    +  + Y+HDTP    F+   R  
Sbjct: 418 DPTQVNWNDPAVHKRGFYFVEAPSANNSLGLVKFILTNGMSIYLHDTPSKHFFDRDYRAL 477

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP-----VKLATEVPVHFVYIS 394
           + GC+RV+N  +L   LLK+  + + + IE+V +  + T      + L T+  V+ +Y +
Sbjct: 478 SHGCIRVQNPSELAYHLLKNEESQTPWTIEKVTEAMQNTKRSQYRIALKTKYKVNIIYYT 537

Query: 395 AWSPKDSIIQFRDDIYGLD 413
           AW   +  +  ++DIY LD
Sbjct: 538 AWVDNNGEVVIKNDIYELD 556


>gi|152978757|ref|YP_001344386.1| hypothetical protein Asuc_1085 [Actinobacillus succinogenes 130Z]
 gi|150840480|gb|ABR74451.1| conserved hypothetical protein [Actinobacillus succinogenes 130Z]
          Length = 494

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 141/259 (54%), Gaps = 8/259 (3%)

Query: 159 SSTLEAMN-VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           +  L ++N VPV+   + L +N  R++ + +   G   + VNIP+  L    NG++ L S
Sbjct: 227 AGNLNSVNKVPVNDNYK-LAINAQRLRIIPDFYNG---IFVNIPSYQLNYYRNGRLTLNS 282

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            VIVG+ +R+TP+++S+++ ++ NP W  P  +I +D++  +++DP YL  +   +ID K
Sbjct: 283 RVIVGKNNRRTPVMYSKLSNVVVNPPWNAPTRLINEDIIPKVKRDPNYLVRHGYSIIDGK 342

Query: 278 GKEVFVEEVDWNS-PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           G  V    ++W S      +  RQ  G  +A+   K    S +  Y+HDTP   LFNN  
Sbjct: 343 GNTVNPYNINWGSIGNKFPYRLRQAAGDNSALGRYKFNMPSSDAIYLHDTPNHALFNNKN 402

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGCVRV     L   LL +   WS    + V+ ++KTT   + ++ PV+  Y++ W
Sbjct: 403 RALSSGCVRVDKSDQLASILLSEA-GWSSDKKQRVLNSKKTTSAPILSDNPVYLYYVTTW 461

Query: 397 SPKDSIIQFRDDIYGLDNV 415
             ++  +Q   DIYG D V
Sbjct: 462 V-ENGKVQSVPDIYGYDRV 479


>gi|315223727|ref|ZP_07865577.1| peptidoglycan binding domain protein [Capnocytophaga ochracea
           F0287]
 gi|314946302|gb|EFS98301.1| peptidoglycan binding domain protein [Capnocytophaga ochracea
           F0287]
          Length = 571

 Score =  135 bits (341), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 160/324 (49%), Gaps = 21/324 (6%)

Query: 105 GNSSVSVQRLRERLIISG-----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           G +   V+ LR  L   G     ++DP +      D+ +  A+K FQ  +GL P G +  
Sbjct: 244 GYTDPEVESLRNALAKKGFRSVPEIDPQE-----VDSTLIWALKRFQRSNGLIPDGSLGI 298

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            TL  +N+    +   L++N+ R++ +    +G  Y++VNIP   L       +  ++ V
Sbjct: 299 QTLNRLNMNKARQRDLLRLNMERMR-VFNNDLGDDYIIVNIPDYKLFLYHKDSLIYQTKV 357

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM--ALLRQDPQYLKDNNIHMIDEK 277
           +VGR    TPI    I  + F P W +P+SII+K+M+   LL++DP+  K+    M  E 
Sbjct: 358 VVGRAQTSTPIFTDSIRSVEFRPTWSVPQSIIKKEMIPQMLLQEDPEKYKNRGYTMY-EN 416

Query: 278 GKEVFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           G+ +   EVDW +P      F F + P + N++   K    +  + Y+HDTP   LF   
Sbjct: 417 GRVIDPLEVDWTNPLVHKRAFYFVEAPSERNSLGLVKFLLNNNMSIYLHDTPSKYLFERE 476

Query: 336 VRFETSGCVRVRNIIDLDVWLLK---DTPTWSRYHIEEVVKTRKTTP--VKLATEVPVHF 390
            R  + GCVRV+N   L  +LLK   D  +W+   +++ +   K     VKL T+  ++ 
Sbjct: 477 QRALSHGCVRVQNPSQLAYYLLKNEGDGKSWTEEKVKDFMNNNKRNQYRVKLNTKYMINI 536

Query: 391 VYISAWSPKDSIIQFRDDIYGLDN 414
           +Y +    K      ++DIY LDN
Sbjct: 537 LYYTISVDKKGEATIKNDIYDLDN 560


>gi|254230281|ref|ZP_04923670.1| putative peptidoglycan binding domain protein [Vibrio sp. Ex25]
 gi|151937178|gb|EDN56047.1| putative peptidoglycan binding domain protein [Vibrio sp. Ex25]
          Length = 345

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 142/285 (49%), Gaps = 7/285 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +E AVK FQ  HGL   G++  +T+  +N     R+  L +N  R +   + +  +
Sbjct: 62  YDEELELAVKEFQRIHGLKEDGVIGPNTIRWINFSPQERLHLLALNSERSRIWSKDRDNV 121

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             V VN+P   +    +G+    S V+VGR  R+TPI+   ++ ++ NP W +P +I+ K
Sbjct: 122 --VFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMSGTLDSVILNPTWNVPWTIMVK 179

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPNFIF--RQDPGKINAMA 309
           D++  ++++P YL ++NI +I        ++   ++W +  P  F +  RQ  G  NA+ 
Sbjct: 180 DIIPKVKRNPMYLINHNIQIIRSWTSNEIIDPTTINWATVNPRTFPYRMRQASGLHNALG 239

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    +    Y+HDTP   LF    R  +SGCVRV +   L   L K      R   +
Sbjct: 240 LYKFNMPNPQAIYLHDTPSKNLFERDRRAFSSGCVRVEHADQLAELLFKTQGLEERLAKK 299

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                R  T V L   + VH +Y +AW  ++  + +RDDIY  D+
Sbjct: 300 RESTRRSNTSVPLGERIQVHIIYQTAWL-EEGTLYYRDDIYKYDH 343


>gi|165975577|ref|YP_001651170.1| hypothetical protein APJL_0122 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165875678|gb|ABY68726.1| hypothetical protein APJL_0122 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 521

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 130/243 (53%), Gaps = 10/243 (4%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP++HS+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMHSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NS 290
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W    NS
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              P +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    
Sbjct: 385 KNLP-YRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSD 443

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++ W     +   R DIY
Sbjct: 444 DLASILLKEA-GWSMDKKQKVLASQKTTSANIPSDNPVYVYYVAPWVENGKVYTLR-DIY 501

Query: 411 GLD 413
             D
Sbjct: 502 EFD 504


>gi|262393898|ref|YP_003285752.1| L,D-transpeptidase YcbB [Vibrio sp. Ex25]
 gi|262337492|gb|ACY51287.1| L,D-transpeptidase YcbB [Vibrio sp. Ex25]
          Length = 513

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 142/285 (49%), Gaps = 7/285 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +E AVK FQ  HGL   G++  +T+  +N     R+  L +N  R +   + +  +
Sbjct: 230 YDEELELAVKEFQRIHGLKEDGVIGPNTIRWINFSPQERLHLLALNSERSRIWSKDRDNV 289

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             V VN+P   +    +G+    S V+VGR  R+TPI+   ++ ++ NP W +P +I+ K
Sbjct: 290 --VFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMSGTLDSVILNPTWNVPWTIMVK 347

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPNFIF--RQDPGKINAMA 309
           D++  ++++P YL ++NI +I        ++   ++W +  P  F +  RQ  G  NA+ 
Sbjct: 348 DIIPKVKRNPMYLINHNIQIIRSWTSNEIIDPTTINWATVNPRTFPYRMRQASGLHNALG 407

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K    +    Y+HDTP   LF    R  +SGCVRV +   L   L K      R   +
Sbjct: 408 LYKFNMPNPQAIYLHDTPSKNLFERDRRAFSSGCVRVEHADQLAELLFKTQGLEERLAKK 467

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                R  T V L   + VH +Y +AW  ++  + +RDDIY  D+
Sbjct: 468 RESTRRSNTSVPLGERIQVHIIYQTAWL-EEGTLYYRDDIYKYDH 511


>gi|302382528|ref|YP_003818351.1| ErfK/YbiS/YcfS/YnhG family protein [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302193156|gb|ADL00728.1| ErfK/YbiS/YcfS/YnhG family protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 521

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 152/337 (45%), Gaps = 31/337 (9%)

Query: 85  YQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV----- 138
           Y+ I+  GGWP       +  G+S   V  +  RL+  GD+  + G  +     V     
Sbjct: 183 YRRIIRNGGWPRFRAGASIEPGSSDTRVPIIITRLVAEGDMSEADGARLTAQGLVYGPEL 242

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
           E+AV+ FQ RHGL P G + + T  ++    + R RQ+ +NL R ++ L++++    + V
Sbjct: 243 ETAVRSFQARHGLAPDGRIGAGTQSSLGASAEDRARQIALNLER-RRWLKRELSPERIEV 301

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           N  AA +   ++G+    + V+ G    QTP L      ++ NP W +P  I +++   +
Sbjct: 302 NTAAAIMVYWKDGRPVHSNRVVCGAPATQTPSLEKPFASVVANPPWYVPAGIARRE---I 358

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
           L + P YL   N+++                     N    Q  G   A+   K E    
Sbjct: 359 LPRGPAYLASQNMYV--------------------QNGTVIQRAGPTAALGYVKFELRDS 398

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
              ++HDTP    FN   R  + GCVRV+N ++    LL   PT      +   +TR+T 
Sbjct: 399 YAIFLHDTPSKAAFNLSTRQRSHGCVRVQNAVEFARILLSPDPTLL-SQFDTAQQTRETK 457

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            ++   E+ V  +Y +A+      + FR+DIY  D V
Sbjct: 458 RIQTGREISVRLLYWTAFVDGQGRVAFREDIYRRDQV 494


>gi|322515092|ref|ZP_08068099.1| hypothetical protein HMPREF0027_1851 [Actinobacillus ureae ATCC
           25976]
 gi|322118898|gb|EFX91080.1| hypothetical protein HMPREF0027_1851 [Actinobacillus ureae ATCC
           25976]
          Length = 530

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 131/243 (53%), Gaps = 10/243 (4%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 277 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 333

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NS 290
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W    NS
Sbjct: 334 LSNVVVNPPWNIPPTILTKDIIPKLARNPGFAGSAGYEIFDRKGNKINPRSVNWSQYVNS 393

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              P +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    
Sbjct: 394 KNIP-YRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSD 452

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW+    +     DIY
Sbjct: 453 DLASILLKEA-GWSMDRKQKVLASQKTTSANIRSDNPVYLYYVTAWAENGKVYTL-PDIY 510

Query: 411 GLD 413
             D
Sbjct: 511 KFD 513


>gi|257465088|ref|ZP_05629459.1| hypothetical protein AM202_01165 [Actinobacillus minor 202]
 gi|257450748|gb|EEV24791.1| hypothetical protein AM202_01165 [Actinobacillus minor 202]
          Length = 537

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 145/291 (49%), Gaps = 19/291 (6%)

Query: 137 YVESAVKLFQMRHG--LDPSGMVDSSTLEAMNVPVD-------LRIRQLQVNLMRIKKLL 187
           Y E+  +LF M  G  +         +      PVD           +L +N  R++ + 
Sbjct: 237 YQETVQRLFAMSPGASISTKKATKGKSKNVAATPVDEVAATGSSSFYKLALNAQRLRIIP 296

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+++ ++ NP W +P
Sbjct: 297 SFNNG---IFVNIPSYQLYYFRDGQLALQSKVIVGREDRRTPVMYSKLSNVVVNPPWNVP 353

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NSPEPPNFIFRQDPG 303
            SI+ KD++  L ++P      +  ++D  G +V    V+W    N+   P +  RQ  G
Sbjct: 354 TSILTKDIVPKLARNPGIADSLSYEILDGSGNKVNPRSVNWSQYLNAKSIP-YRIRQKAG 412

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             +A+   K    S +  Y+HDTP   LF+   R  +SGCVRV    +L   LLK+   W
Sbjct: 413 DDSALGRYKFNMPSSDAIYLHDTPNHGLFSRTDRALSSGCVRVAKSSELASILLKEA-GW 471

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           S    + V+ ++KTT   + ++ PV+  Y+++W     +     DIY LDN
Sbjct: 472 SAEKQQSVLASKKTTSANIRSDNPVYLYYVTSWVEGGKVYTL-PDIYKLDN 521


>gi|118589141|ref|ZP_01546548.1| hypothetical protein SIAM614_13853 [Stappia aggregata IAM 12614]
 gi|118438470|gb|EAV45104.1| hypothetical protein SIAM614_13853 [Stappia aggregata IAM 12614]
          Length = 656

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 139/275 (50%), Gaps = 8/275 (2%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDL-RIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           VK FQ    L P G++  +T+ AM    +  +I ++++ + R + L EQ +G R V +N 
Sbjct: 367 VKAFQKEAKLTPDGIIGKNTINAMVGETNAAKIAKVELAMERSRWLPEQ-LGERKVFINQ 425

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
            A +      G+  L   V+VG+   QT   + +I  + +NPYW +P SII  +M+  L 
Sbjct: 426 AAFTATYTAPGEDPLSMRVVVGKKSNQTNFFYDKIQIVEYNPYWGVPYSIIVNEMLPKLA 485

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSR 318
           +DP YL      +    G+++    VDW   + +  +   RQ PG  NA+   KI F ++
Sbjct: 486 KDPSYLDRAGYEVTTPGGRQISSSAVDWYAVASKQQSVNVRQYPGSSNALGEVKILFPNK 545

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           ++ YMHDTP   LF   +R  + GC+R+++   +   +L      S+ ++   +   +  
Sbjct: 546 HHIYMHDTPAKSLFKKDMRAYSHGCIRLQDPKAMAAAVLGK----SKDYVSSRISGGQNE 601

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             ++  ++PV+  Y +AW  +D  I F  D+Y  D
Sbjct: 602 QERVTGDIPVYVSYFTAWPEQDGTIGFYTDVYDRD 636


>gi|213963732|ref|ZP_03391982.1| putative peptidoglycan binding domain protein [Capnocytophaga
           sputigena Capno]
 gi|213953612|gb|EEB64944.1| putative peptidoglycan binding domain protein [Capnocytophaga
           sputigena Capno]
          Length = 563

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 158/327 (48%), Gaps = 10/327 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           + P +    G ++  V +LR  L   G     +  +   D+ +   V+ FQ  +GL   G
Sbjct: 228 DFPAKDFVYGYTAPIVVQLRNSLKQKGFEAAPEIEAQMVDSTLIRTVQRFQKSNGLTADG 287

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           ++   TL  +N+        LQ+N+ R++ +    +G  Y LVNIP   L       +  
Sbjct: 288 LLGKQTLYFLNMNKTRERDLLQLNMERMR-VFNNDLGEHYALVNIPDFKLSLFHKDSLQF 346

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHM 273
           ++ V+VGR +  TPI    I  + F P W +P+SII+K+M+  +  + DP+  +     M
Sbjct: 347 QTRVVVGRTETSTPIFTDTIRYVEFRPTWSVPQSIIKKEMLPQIISQADPEKYQKRGYTM 406

Query: 274 IDEKGKEVFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
             EKGK+V    +DW  P      F F + P   N++   K    +  + Y+HDTP    
Sbjct: 407 Y-EKGKKVDPTTIDWTDPSVHKRGFHFVEAPSANNSLGLVKFILTNDMSIYLHDTPSKYF 465

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT----RKTTPVKLATEVP 387
           F    R  + GCVRV+N  +L   LLK+  T + + +E+V +     R    + L T+  
Sbjct: 466 FQRDDRALSHGCVRVQNPNELAYHLLKNEATETPWTLEKVNEAMNGKRSQYRIALKTKYK 525

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDN 414
           ++ +Y +A+  ++  +  ++DIY LDN
Sbjct: 526 INILYYTAFIDENGELTLKNDIYDLDN 552


>gi|15602135|ref|NP_245207.1| hypothetical protein PM0270 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720500|gb|AAK02354.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 515

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 133/253 (52%), Gaps = 8/253 (3%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           E M+     ++ ++ +N  R++ +     GL    VNIP+  L    +GK+ L S VIVG
Sbjct: 251 EGMDNDKLAQLYKIAINAQRLRVIPTFDNGL---FVNIPSYQLHYYRDGKLILTSKVIVG 307

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +  R+TP+L+S+++ ++ NP W  P  +I +D++  +R+DP Y+  N   +ID KGK + 
Sbjct: 308 KKARKTPVLYSKLSDVVVNPPWNTPTRLINEDIIPRVRKDPSYIYRNGYTIIDSKGKTID 367

Query: 283 VEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
              +DW +     F +  RQ PG  +A+ + K    S +  Y+HDTP   LF       +
Sbjct: 368 PYTIDWENMTAKKFPYRLRQAPGD-SALGNFKFNMPSSDAIYLHDTPSRGLFAKKDLALS 426

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
           SGCVRV    +L   LLK+   WS       VK+RKT  V +A+  PV   Y++AW   +
Sbjct: 427 SGCVRVEKADELASVLLKEA-GWSEERKVNTVKSRKTISVNVASNNPVFLYYVTAWV-NN 484

Query: 401 SIIQFRDDIYGLD 413
                  DIYG D
Sbjct: 485 GKTHTLPDIYGYD 497


>gi|153009554|ref|YP_001370769.1| peptidoglycan-binding domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561442|gb|ABS14940.1| Peptidoglycan-binding domain 1 protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 668

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 139/283 (49%), Gaps = 8/283 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  + SA+K +Q   G  P G++  +TL A+        R   +  M   + L    G 
Sbjct: 375 YDPELVSAIKDYQKLSGSTPDGVIGRNTLSALQGEQSSIKRDRILYSMERLRWLPHDFGT 434

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           RYV+VN PA   E  E+GK  L   V++G    QT   ++++  ++FNP W +PRSII  
Sbjct: 435 RYVMVNQPAYRAEYFEDGKEKLAMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIILN 494

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAST 311
           +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   NA+   
Sbjct: 495 EMLPKVMRDTSYL-DRNGYEVYAGGKKVSASAVNWSAVAAGKAHVGIRQKPSLDNALGEL 553

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           KI F + ++ YMHDTP    F+  +R  + GC+R+    D+   +L  + T     +E+ 
Sbjct: 554 KILFPNAHDIYMHDTPAKSYFSRDMRALSHGCIRLERPRDMAAAVLGTSVT----DLEKY 609

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +    +K+   VPV   Y +AW   D  I +  D+Y  D+
Sbjct: 610 F-GKNERGIKVKEPVPVFISYFTAWPEADGKIHYYGDVYDRDS 651


>gi|296531943|ref|ZP_06894738.1| peptidoglycan-binding domain 1 protein [Roseomonas cervicalis ATCC
           49957]
 gi|296267730|gb|EFH13560.1| peptidoglycan-binding domain 1 protein [Roseomonas cervicalis ATCC
           49957]
          Length = 321

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 7/292 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E+AV+ +Q  H L+  G V   T   MN P    + Q++V + + +       G 
Sbjct: 28  YDAPLEAAVRRWQAAHSLEVDGRVGPMTQRLMNRPAGAVVGQIRVAMDQRRGRGAAAPG- 86

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R + VNIP   L  ++  +      V+VG+V R TP L  R+  + FNP W +P    ++
Sbjct: 87  RRIEVNIPEFRLRVMDGARQVTAMNVVVGKVARATPPLAVRMTAVQFNPPWGVPERNARE 146

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNF--IFRQDPGKINAM 308
           D++   R+DP+ + +    +    G E   V    VDW S  P  F  I RQD   ++A+
Sbjct: 147 DLLPKFRRDPRAMMEKGFRLFTVVGGERVEVDPMTVDWASVNPQRFPYIVRQDASDVSAL 206

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    + ++ Y+HDTP+  LF    R  +SGC+R+   ++L   +L+  P W+R   
Sbjct: 207 GRLKFVMPNGDDIYLHDTPDRHLFGRADRALSSGCIRLSQPMELLDLVLEGVPGWNRERA 266

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +  + +R+T+ + L    PV   Y +    +    +   DIYGLD  ++ ++
Sbjct: 267 QRALDSRQTSFLSLPRAWPVRLHYDTVVV-EQGQARLLSDIYGLDAAYLRLL 317


>gi|307249325|ref|ZP_07531319.1| hypothetical protein appser4_1390 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858619|gb|EFM90681.1| hypothetical protein appser4_1390 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 521

 Score =  133 bits (335), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 131/243 (53%), Gaps = 10/243 (4%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N+ R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNVQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NS 290
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W    NS
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              P +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    
Sbjct: 385 KNLP-YRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSD 443

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW     +     DIY
Sbjct: 444 DLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWVENGKVYTL-PDIY 501

Query: 411 GLD 413
             D
Sbjct: 502 KFD 504


>gi|254500817|ref|ZP_05112968.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222436888|gb|EEE43567.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 658

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 137/275 (49%), Gaps = 8/275 (2%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDL-RIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           VK FQ    L   G+V  +T++AM    +  +I ++++ + R  + L +++G R V +N 
Sbjct: 369 VKGFQKEAKLTADGIVGKNTIKAMVGETNAAKIAKVELAMER-SRWLPEELGERKVFINQ 427

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PA +    + G   +   V+VG+   QT   + +I  + +NPYW +P SII  +M+  L 
Sbjct: 428 PAFTATYHQPGTDPMSMRVVVGKKSNQTNFFYDKIEIVEYNPYWGVPYSIIVNEMIPKLA 487

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSR 318
            +P YL      +    G++V    VDW   + +  +   RQ PG+ NA+   KI F +R
Sbjct: 488 ANPSYLDQAGYEVTTPGGRKVSSASVDWYAVANKKKSINVRQYPGRSNALGEVKILFPNR 547

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           ++ YMHDTP   LFN   R  + GC+R+ +   +   +L  +  +    +   +   +  
Sbjct: 548 HHIYMHDTPSKSLFNKDTRAFSHGCIRLHDPKGMAAAVLGKSTDY----VSSRIAAGQNA 603

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             K+  ++PV+  Y +AW   D  I F  D+Y  D
Sbjct: 604 QEKVTGDIPVYVSYFTAWPEADGSIGFYTDVYDRD 638


>gi|303251945|ref|ZP_07338116.1| hypothetical protein APP2_0272 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247104|ref|ZP_07529156.1| hypothetical protein appser2_1030 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307256146|ref|ZP_07537933.1| hypothetical protein appser10_1510 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307262708|ref|ZP_07544336.1| hypothetical protein appser13_1350 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|302649375|gb|EFL79560.1| hypothetical protein APP2_0272 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306856353|gb|EFM88504.1| hypothetical protein appser2_1030 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306865327|gb|EFM97223.1| hypothetical protein appser10_1510 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306871963|gb|EFN03679.1| hypothetical protein appser13_1350 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 521

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 130/243 (53%), Gaps = 10/243 (4%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NS 290
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W    NS
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              P +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    
Sbjct: 385 KNLP-YRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSD 443

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW     +     DIY
Sbjct: 444 DLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWVENGKVYTL-PDIY 501

Query: 411 GLD 413
             D
Sbjct: 502 KFD 504


>gi|307244929|ref|ZP_07527026.1| hypothetical protein appser1_1410 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307253883|ref|ZP_07535735.1| hypothetical protein appser9_1410 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258337|ref|ZP_07540078.1| hypothetical protein appser11_1400 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306854094|gb|EFM86302.1| hypothetical protein appser1_1410 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306863087|gb|EFM95029.1| hypothetical protein appser9_1410 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867521|gb|EFM99368.1| hypothetical protein appser11_1400 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 521

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 130/243 (53%), Gaps = 10/243 (4%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NS 290
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W    NS
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              P +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    
Sbjct: 385 KNLP-YRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSD 443

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW     +     DIY
Sbjct: 444 DLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWVENGKVYTL-PDIY 501

Query: 411 GLD 413
             D
Sbjct: 502 KFD 504


>gi|32034588|ref|ZP_00134744.1| COG2989: Uncharacterized protein conserved in bacteria
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126207609|ref|YP_001052834.1| hypothetical protein APL_0121 [Actinobacillus pleuropneumoniae L20]
 gi|126096401|gb|ABN73229.1| hypothetical protein APL_0121 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 521

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 130/243 (53%), Gaps = 10/243 (4%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NS 290
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W    NS
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              P +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    
Sbjct: 385 KNLP-YRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSD 443

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW     +     DIY
Sbjct: 444 DLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWVENGKVYTL-PDIY 501

Query: 411 GLD 413
             D
Sbjct: 502 KFD 504


>gi|307260578|ref|ZP_07542270.1| hypothetical protein appser12_1530 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306869655|gb|EFN01440.1| hypothetical protein appser12_1530 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 521

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 130/243 (53%), Gaps = 10/243 (4%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NS 290
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W    NS
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              P +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    
Sbjct: 385 KNLP-YRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSD 443

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW     +     DIY
Sbjct: 444 DLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWVENGKVYTL-PDIY 501

Query: 411 GLD 413
             D
Sbjct: 502 KFD 504


>gi|303249825|ref|ZP_07336029.1| hypothetical protein APP6_1233 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251648|ref|ZP_07533553.1| hypothetical protein appser6_1700 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302651392|gb|EFL81544.1| hypothetical protein APP6_1233 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860845|gb|EFM92853.1| hypothetical protein appser6_1700 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 521

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 130/243 (53%), Gaps = 10/243 (4%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NS 290
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W    NS
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              P +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    
Sbjct: 385 KNLP-YRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSD 443

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW     +     DIY
Sbjct: 444 DLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWVENGKVYTL-PDIY 501

Query: 411 GLD 413
             D
Sbjct: 502 KFD 504


>gi|260459428|ref|ZP_05807683.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034982|gb|EEW36238.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 628

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 144/280 (51%), Gaps = 18/280 (6%)

Query: 142 VKLFQMRHGLDPSGMVDSST--LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +K  Q + G+   G++   T  L A     D R+ ++QV L  ++  L   +G   V +N
Sbjct: 343 IKAVQQKEGMKGDGVIGPRTVALLAGTSKAD-RLLKVQVALEELR-WLPSDLGSPRVFIN 400

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
            PA +   +++G+  L++  ++GR   QT   + +I ++ F+PYW +P+SII  +M+  L
Sbjct: 401 QPAFTASYIDDGQEKLKTRAVIGRTTNQTAFFYDQIKQVDFHPYWGVPQSIIVNEMLPRL 460

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDW-----NSPEPPNFIFRQDPGKINAMASTKIE 314
           R DP YL      + D +GK +    V+W     N P    +  RQ P + NA+   KI 
Sbjct: 461 RNDPGYLDRAGYEVTDSRGKRIPSSAVNWGGYGANIP----YSVRQQPSEANALGELKIL 516

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           F +++  YMHDTP+   F   +R  + GCVR+++   +   +L DT   S  +I E +K 
Sbjct: 517 FPNKHAIYMHDTPQKSFFKQDMRALSHGCVRLQDPRGMAAAVL-DT---SVDYIAEKLKH 572

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             +T   +  ++PV+  Y +AW      +++  D+Y  D+
Sbjct: 573 GHST-QDVTRKIPVYVAYFTAWPDMSGKVEYFGDVYDRDS 611


>gi|217978718|ref|YP_002362865.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217504094|gb|ACK51503.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 629

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 149/317 (47%), Gaps = 22/317 (6%)

Query: 97  LPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +P  P L +G     V  +R RL + G     + L   +D  V SAV  FQ  +GL  SG
Sbjct: 322 IPTGPTLKVGMRDPRVPLIRSRLSLDGREGEPENL--VYDTQVASAVADFQKANGLPGSG 379

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
            +++ T+  ++     R+    +  M   + + + MG   + VNIP   +  +ENG V  
Sbjct: 380 QLNARTIALLSGGDQSRVEAEILANMERWRWMPRDMGESRIEVNIPDYEVSVIENGAVIS 439

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
           ++ V+VG+ D  TP+  + +  ++ NPYW +P+SII+K+MM  +  DP YL       + 
Sbjct: 440 QNRVVVGKEDTPTPVFSNTMQFLIVNPYWTVPQSIIRKEMMPKIAADPNYLHRMGYEAVW 499

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           + GK                   RQ PG+ NA+   K  F +    Y+HDTP   LF   
Sbjct: 500 KNGK----------------LGVRQPPGERNALGRIKFMFPNDYAVYLHDTPSRALFEQH 543

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            R  + GCVRV +       +L     WS   +++++  ++   V LA  +P+H  Y +A
Sbjct: 544 KRAFSHGCVRVDDPFRFAQSVLGK--GWSEERVQKLIGGKERY-VHLAKPLPIHLEYFTA 600

Query: 396 WSPKDSIIQFRDDIYGL 412
                  +Q  +DIYG 
Sbjct: 601 KVDPYGQLQLSEDIYGF 617


>gi|319783599|ref|YP_004143075.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169487|gb|ADV13025.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 629

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 140/275 (50%), Gaps = 8/275 (2%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDL-RIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           +K  Q + G+   G++   T+ ++       ++ +++V L  ++  L   +G   V +N 
Sbjct: 344 IKAVQQKAGMKGDGVIGPRTVASLAGTSKADKLLKVEVALEELR-WLPSDLGSPRVFINQ 402

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PA +   ++NG+  LR+ V+VGR   QT   + +I ++ F+PYW +P+SII  +M+  LR
Sbjct: 403 PAFTASYIDNGEEKLRTRVVVGRTTNQTSFFYDQIKQVDFHPYWGVPQSIIVNEMLPRLR 462

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PEPPNFIFRQDPGKINAMASTKIEFYSRN 319
            DP YL      + D +GK +    V+W +      +  RQ P + NA+   KI F +++
Sbjct: 463 NDPGYLDRAGYEVTDSRGKRIPSSAVNWGAYGSNIPYSVRQQPSEANALGELKILFPNKH 522

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             YMHDTP+   F   +R  + GCVR+++   +   +L  +  +    I E +K    T 
Sbjct: 523 AIYMHDTPQKSFFQRDMRALSHGCVRLQDPRGMAAAVLGTSVDY----IAEKLKHGHATE 578

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             +   +PV+  Y +AW      +++  D+Y  D+
Sbjct: 579 -NVTRTIPVYVAYFTAWPDLSGKVEYFGDVYDRDS 612


>gi|239831842|ref|ZP_04680171.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239824109|gb|EEQ95677.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 670

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  + +A+K +Q   G  P G++  +TL A+        R   +  M   + L    G 
Sbjct: 377 YDPELVAAIKDYQKLSGSTPDGVIGRNTLSALQGEQSSIKRDRILYSMERLRWLPHDFGT 436

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           RYV+VN PA   E  E+GK  L   V++G    QT   ++++  ++FNP W +PRSII  
Sbjct: 437 RYVMVNQPAYRAEYFEDGKEKLAMNVVIGSPSHQTYFFYNKVQTVVFNPSWGVPRSIILN 496

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAST 311
           +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   NA+   
Sbjct: 497 EMLPKVMRDTSYL-DRNGYEVYADGKKVSASAVNWSAVAAGKAHVGIRQKPSLDNALGEL 555

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           KI F + ++ YMHDTP    F+  +R  + GC+R+    D+   ++  T       ++++
Sbjct: 556 KILFPNSHDIYMHDTPAKSYFSRDMRALSHGCIRLERPRDMAAAVMGTT-------VQDL 608

Query: 372 VK--TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            K   +    +K+   VPV+  Y +AW      I++  D+Y  D+
Sbjct: 609 DKYFGKNERGIKVKEPVPVYISYFTAWPDASGQIRYYGDVYDRDS 653


>gi|121591699|ref|ZP_01678927.1| putative peptidoglycan binding domain protein [Vibrio cholerae
           2740-80]
 gi|153819645|ref|ZP_01972312.1| putative peptidoglycan binding domain protein [Vibrio cholerae NCTC
           8457]
 gi|121546440|gb|EAX56672.1| putative peptidoglycan binding domain protein [Vibrio cholerae
           2740-80]
 gi|126509804|gb|EAZ72398.1| putative peptidoglycan binding domain protein [Vibrio cholerae NCTC
           8457]
          Length = 459

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 124/219 (56%), Gaps = 6/219 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +DA +E  +K FQ  HGL   G++   T++ +N  V  R+  L +N  RI+    Q+  +
Sbjct: 233 YDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQDSM 292

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P   ++  + G+    S V+VG+  R TP+++++++ ++ NP W +P  I+ +
Sbjct: 293 --IVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 350

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMA 309
           D++ ++++D +YL ++++ +I        ++   +DW + EP  F +  RQ  G  NA+ 
Sbjct: 351 DILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALG 410

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           + K    +    Y+HDTP   LFNN  R  +SGC+RV N
Sbjct: 411 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVEN 449


>gi|240948089|ref|ZP_04752499.1| hypothetical protein AM305_04803 [Actinobacillus minor NM305]
 gi|240297569|gb|EER48061.1| hypothetical protein AM305_04803 [Actinobacillus minor NM305]
          Length = 539

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 133/244 (54%), Gaps = 10/244 (4%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 286 KLALNAQRLRIIPSFNNG---IFVNIPSYQLYYFRDGQLALQSKVIVGREDRRTPVMYSK 342

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NS 290
           ++ ++ NP W +P SI+ KD++  L ++P      +  ++D  G +V    V+W    N+
Sbjct: 343 LSNVVVNPPWNVPTSILTKDIVPKLARNPGIADSLSYEILDGSGNKVNPRSVNWSQYLNA 402

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              P +  RQ  G  +A+   K    S +  Y+HDTP   LF+   R  +SGCVRV    
Sbjct: 403 KSIP-YRIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNHGLFSRTDRALSSGCVRVNKSS 461

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           +L   LL++   WS    + V+ ++KTT V + ++ PV+  Y+++W     +     DIY
Sbjct: 462 ELASILLREA-GWSAEKQQSVLASKKTTSVNIRSDNPVYLYYVTSWVEGGKVYTL-PDIY 519

Query: 411 GLDN 414
            LD+
Sbjct: 520 KLDS 523


>gi|150396784|ref|YP_001327251.1| hypothetical protein Smed_1575 [Sinorhizobium medicae WSM419]
 gi|150028299|gb|ABR60416.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
          Length = 631

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           V+ FQ  HGL   G+V  +++ A+     +  +IR++++  M   + L   +G RYV +N
Sbjct: 347 VEAFQKEHGLKADGIVGQASIRAITGGDTIGEKIRKIEI-AMEQARWLPDGLGDRYVFIN 405

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
            PA +    E G       V+VG    QT      I  +  NPYW +P+SII  +M+  L
Sbjct: 406 QPAFTASYTEQGAEQFSMRVVVGSKANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKL 465

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           R DP YL D   + ++  G+ V    V+W      +   RQ P   NA+   KI F + +
Sbjct: 466 RSDPGYL-DRMGYQVEVGGRVVSSTAVNWYG-STNSIAVRQPPSSDNALGELKILFPNAH 523

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             YMHDTP    F    R  + GCVR+ +   +   +L      S   + E +   +   
Sbjct: 524 AIYMHDTPSKSFFKRDQRALSHGCVRLADPRRMAAAVL----GVSVDEVGEEISGGRNKA 579

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           + ++ +VPV+  Y +AW  KD  +++ +D+Y  D
Sbjct: 580 LPVSAKVPVYVSYFTAWPNKDGTVEYFNDVYERD 613


>gi|304392206|ref|ZP_07374148.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303296435|gb|EFL90793.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 694

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 142/299 (47%), Gaps = 23/299 (7%)

Query: 133 AFDA---------YVESAVKL---FQMRHGLDPSGMVDSSTLEAMNV-PVDLRIRQLQVN 179
           AFDA         Y+E AV+L   FQ + GL P G+V  +TL  +       +I ++++ 
Sbjct: 381 AFDALMMDYSDGVYIEEAVELVRAFQKKSGLKPDGIVGKNTLARLKFDSPKTKIDKVRLA 440

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           + R++      +G R+V +N PA     +  GK  +    +VG+   QT   H  I  + 
Sbjct: 441 MERLR-WHPDSLGSRHVFINQPAYRATLMNGGKPQISMRAVVGKPQHQTNFFHDEIEYVE 499

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF- 298
           FNPYW IPRSI+  +M+  LR++P +  DN  + +  +G                NF + 
Sbjct: 500 FNPYWGIPRSILVNEMLPKLRRNPSHF-DNLGYEVTTQGGRRISSSSVDWWSVGSNFPYN 558

Query: 299 -RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ PG  NA+   KI F +++  YMHDTP   LF    R  + GCVR+ +   +   +L
Sbjct: 559 VRQPPGPKNALGELKIMFPNKHAIYMHDTPAKSLFKREKRAYSHGCVRLADPRAMAAAVL 618

Query: 358 KDTPTWSRY-HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
                 +R   +   +  R+    +L T++PV   Y +AW   D  +++  D+Y  D  
Sbjct: 619 -----GTRVDDVSAEIFDRQNKTRRLKTKLPVFVSYFTAWPTADGKVEYFGDVYQRDTA 672


>gi|52424877|ref|YP_088014.1| hypothetical protein MS0822 [Mannheimia succiniciproducens MBEL55E]
 gi|52306929|gb|AAU37429.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 486

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 143/269 (53%), Gaps = 13/269 (4%)

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           +  +D  G  D    +++N  +   + +L +N  R++ +     G   + VNIP+  L  
Sbjct: 211 QQTIDKIGSSDFDDDKSVNSAI---LYKLALNAQRLRVIPNFSNG---IFVNIPSYQLNY 264

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
             + ++ L S VIVG+ +R+TP+++S+++ ++ NP W  P  +I +D++  ++++P YL 
Sbjct: 265 YRDNQLILNSRVIVGKKERRTPVMYSKLSNVVVNPPWNAPTRLINEDIVPKIKKNPGYLS 324

Query: 268 DNNIHMIDEKGKEVFVEEVDW---NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
            +   ++D KG +V    ++W    S  P  +  RQD G  +A+   K    S +  Y+H
Sbjct: 325 AHGYSILDSKGNKVNPNSINWAAIGSKFP--YRIRQDAGDNSALGRFKFNMPSSDAIYLH 382

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFN   R  +SGCVRV     L   LLK+   WS    + V+ ++KTT   + +
Sbjct: 383 DTPNHNLFNKQDRALSSGCVRVEKSNQLASILLKEA-GWSEDKKQRVLNSKKTTSAPIYS 441

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           + PV+  Y++AW  ++  +    DIYG D
Sbjct: 442 DNPVYLYYVTAWV-ENGQVNTLPDIYGYD 469


>gi|300024143|ref|YP_003756754.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525964|gb|ADJ24433.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 654

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 4/280 (1%)

Query: 134 FDAYVESAVKLFQMRHGLDP-SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  +  AVK +++  G+DP +  + ++   ++N    +   +L  N M   + +   +G
Sbjct: 301 YDDDLARAVKAYKVEKGIDPPTPTITTALRRSLNGDDGISEAKLLAN-MEEWRWMPDDLG 359

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
             YV VNIP   +  V++G+V     ++ G V+RQTP+    +  I+F P W +P SI  
Sbjct: 360 DFYVTVNIPDFKVRVVKDGEVVFDERIVTGSVNRQTPVFSDMMRTIVFQPRWNVPDSIKV 419

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           K+++  LR     L+   + M +  G+ +    ++W   +  NF   Q P   NA+   K
Sbjct: 420 KELLPGLRAGGDPLRRQGLVM-ERNGRRISATSINWYRSDIRNFHVYQPPSGGNALGVVK 478

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F + +  Y+HDTP   LFN  +R  + GC+RVRN + L   +L     W +  + +++
Sbjct: 479 FLFPNAHAVYLHDTPSKGLFNESIRAFSHGCMRVRNPVQLAEVVLAQDKGWDKIAVNDLL 538

Query: 373 KTR-KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           K   +   + L   +PVH  Y +A +  D  I+   DIYG
Sbjct: 539 KNGPEENEIALDRPIPVHITYFTARAGDDGAIESFGDIYG 578


>gi|152993088|ref|YP_001358809.1| hypothetical protein SUN_1501 [Sulfurovum sp. NBC37-1]
 gi|151424949|dbj|BAF72452.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 397

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 149/315 (47%), Gaps = 42/315 (13%)

Query: 101 PLHLGNSSVSVQRLRE--RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           PL  GN    + R++   RL+   DL     ++   D+++E AVK +Q RHGL+  G + 
Sbjct: 112 PLFRGNEVEDIMRIKAIFRLLGIADLPDDPYIT---DSFIE-AVKEYQRRHGLEVDGKIG 167

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             T  +M  P+   IR+++ NL+ +K ++ +K    YVLVNIP  ++   ENG   L   
Sbjct: 168 PQTRRSMKQPISSIIRKVKKNLV-LKSIVHEKPAT-YVLVNIPEFAMHYYENGWPALNMK 225

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           V+VG+   +TP+ H  +  I+ NP W +P SI  K+      +   YL+   +   +  G
Sbjct: 226 VVVGKPKMRTPVFHRNMQYIVENPRWNVPPSIYAKEYAN---KSESYLRKKGL-FYNSDG 281

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           K                    Q PG+ N++   K  F +R N YMHDTP   LF    R 
Sbjct: 282 K------------------LYQRPGRRNSLGLVKFLFPNRFNVYMHDTPSKYLFKRYRRA 323

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GC+R+     L   L K   T+         +  KT  + L   +PV+  Y + W  
Sbjct: 324 YSHGCIRLEKPFAL---LNKLGYTY---------RPGKTRWITLKHTIPVYVEYHTVWVD 371

Query: 399 KDSIIQFRDDIYGLD 413
            + I+QFR DIYG +
Sbjct: 372 DNGIVQFRPDIYGYE 386


>gi|161618916|ref|YP_001592803.1| peptidoglycan binding domain-containing protein [Brucella canis
           ATCC 23365]
 gi|161335727|gb|ABX62032.1| Peptidoglycan-binding domain 1 protein [Brucella canis ATCC 23365]
          Length = 510

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 143/286 (50%), Gaps = 14/286 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 217 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 275

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   +++I  ++FNP W +PRSII 
Sbjct: 276 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKIQTVVFNPSWGVPRSIIL 335

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 336 NEMLPKVMRDTSYL-DRNGYKVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 394

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +       ++ 
Sbjct: 395 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS-------VKN 447

Query: 371 VVK--TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + K   +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 448 LDKYFGKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 493


>gi|260772914|ref|ZP_05881830.1| hypothetical protein VIB_001376 [Vibrio metschnikovii CIP 69.14]
 gi|260612053|gb|EEX37256.1| hypothetical protein VIB_001376 [Vibrio metschnikovii CIP 69.14]
          Length = 512

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 177/376 (47%), Gaps = 26/376 (6%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-------------H 103
           +R+ + + +  P ++   +    +  A++Q + + G    L   PL              
Sbjct: 143 SRLALSVAAGTPAMADLVLQHAPQDPAYHQLVYAYGFLSALKTTPLPVYRQAGLKRPGDK 202

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           L +    +QRL    +++ D+   +     +D  +   +K FQ  HGL+  G++   TL+
Sbjct: 203 LDDRPTLIQRL---ALVNIDVTVIRDDVSWYDNSLIEPIKHFQQLHGLNADGVIGPQTLK 259

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            +N+ V+ R+  + +N  R++           ++VN+P+  L+    G+   +S V+VGR
Sbjct: 260 WLNLSVEERLGLIALNAERMRLWPTSNTS---IVVNVPSFELKYWHAGENVFQSKVVVGR 316

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
           + R TP++ +R++ ++ NP W IP  I+ +D++ + ++D +YL   N+ ++   G    +
Sbjct: 317 ISRPTPVMTTRLDSLIVNPTWNIPYKIMVEDILPMAKRDLRYLDRQNLEILPRWGATQTL 376

Query: 284 E--EVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
           +   +DW   S E   +  RQ  G  NA+   K    +R   ++HDTP   LF    R  
Sbjct: 377 DPTSIDWENISLEAFPYRMRQRAGYHNALGLYKFNTPNRRAIFLHDTPSKYLFERDSRAF 436

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGC+RV +       LL      S+    +     +  P++    +PV  +Y +AW   
Sbjct: 437 SSGCIRVEHADQFANMLLTKQGLDSQQFAPQSSSVNQAIPLR--QRIPVQIIYQTAWYDA 494

Query: 400 DSIIQFRDDIYGLDNV 415
              + FR+DIY LD +
Sbjct: 495 GQ-LHFREDIYRLDKL 509


>gi|300773386|ref|ZP_07083255.1| peptidoglycan-binding domain 1 protein [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300759557|gb|EFK56384.1| peptidoglycan-binding domain 1 protein [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 488

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 117/233 (50%), Gaps = 13/233 (5%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRV-------------DRQTPILHSRINRIMF 240
           +YV+VNIP   L  V+N K      V VG               + +TP+L   ++R+  
Sbjct: 243 KYVVVNIPEQKLRMVDNRKTKDVMNVCVGETIYGPYARRAGATDNHETPVLSGELDRMQV 302

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W IP SI++K++++ LR +P YL+  N+   ++KG+ V    VDW+S    NF F+Q
Sbjct: 303 NPVWNIPVSIVKKELISSLRSNPNYLESRNMVAYNKKGQMVDPNTVDWSSDSVLNFKFKQ 362

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           +PG  N++ + K  F +  + Y+HDTP   +F+   R  + GCVRV     L  +L+ D 
Sbjct: 363 NPGADNSLGNIKFIFSNPYSIYLHDTPAKQMFSAKNRAVSHGCVRVERPAALAAFLVNDD 422

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               +   E      K+  V +   +PV+  Y + W   D  +    DIYG D
Sbjct: 423 KKAEQIATEIADTLNKSRWVMMKKTIPVYITYYTTWVDDDGKLYRLPDIYGYD 475


>gi|163843230|ref|YP_001627634.1| peptidoglycan binding domain-containing protein [Brucella suis ATCC
           23445]
 gi|163673953|gb|ABY38064.1| Peptidoglycan-binding domain 1 protein [Brucella suis ATCC 23445]
          Length = 510

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 143/286 (50%), Gaps = 14/286 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 217 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 275

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 276 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 335

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 336 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 394

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +       ++ 
Sbjct: 395 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS-------VKN 447

Query: 371 VVK--TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + K   +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 448 LDKYFGKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 493


>gi|148825793|ref|YP_001290546.1| hypothetical protein CGSHiEE_03720 [Haemophilus influenzae PittEE]
 gi|148715953|gb|ABQ98163.1| hypothetical protein CGSHiEE_03720 [Haemophilus influenzae PittEE]
          Length = 489

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 131/241 (54%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG+  R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGKNSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 353

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSDQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 470

Query: 413 D 413
           D
Sbjct: 471 D 471


>gi|229845074|ref|ZP_04465210.1| hypothetical protein CGSHi6P18H1_00944 [Haemophilus influenzae
           6P18H1]
 gi|229812046|gb|EEP47739.1| hypothetical protein CGSHi6P18H1_00944 [Haemophilus influenzae
           6P18H1]
          Length = 489

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 131/241 (54%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG+  R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGKNSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 353

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNHGLFNRKNRALSSGCVRIEKSDQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 470

Query: 413 D 413
           D
Sbjct: 471 D 471


>gi|145639176|ref|ZP_01794783.1| hypothetical protein CGSHiII_04039 [Haemophilus influenzae PittII]
 gi|145271738|gb|EDK11648.1| hypothetical protein CGSHiII_04039 [Haemophilus influenzae PittII]
          Length = 489

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 131/241 (54%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG+  R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGKNSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 353

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNHGLFNRKNRALSSGCVRIEKSDQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 470

Query: 413 D 413
           D
Sbjct: 471 D 471


>gi|261754930|ref|ZP_05998639.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
 gi|261744683|gb|EEY32609.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
          Length = 660

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 367 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 425

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 426 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 485

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 486 NEMLPKVMRDTSYL-DRNGYKVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 544

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 545 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 602

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 603 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|254704262|ref|ZP_05166090.1| cell wall degradation protein [Brucella suis bv. 3 str. 686]
          Length = 670

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 377 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 435

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 436 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 495

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 496 NEMLPKVMRDTSYL-DRNGYKVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 554

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 555 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 612

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 613 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|23501845|ref|NP_697972.1| hypothetical protein BR0962 [Brucella suis 1330]
 gi|23347781|gb|AAN29887.1| conserved hypothetical protein [Brucella suis 1330]
          Length = 572

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 279 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 337

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 338 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 397

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 398 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 456

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 457 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 514

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 515 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 555


>gi|322434022|ref|YP_004216234.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX9]
 gi|321161749|gb|ADW67454.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX9]
          Length = 625

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 10/289 (3%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           S  + A +  AVK +Q RH L  +G + ++T+ ++NVP+  R +QL  +L R++ L +  
Sbjct: 311 STVYTADLADAVKHYQSRHSLTANGQLTAATVTSLNVPLTARSQQLADSLERLRWLPDPY 370

Query: 191 MGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIP 247
           +    + VN+P   L    E+ +   +  V+VG+V  + QTP+    +  ++F P+W +P
Sbjct: 371 LHAP-LQVNLPEFVLRGFGEDHQQQFKMNVVVGQVVGEHQTPVFTHMMKYVIFRPFWNVP 429

Query: 248 RSIIQKDMMA-LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
            SII+K++   + +    YL+ +N   +D KG  V        S E    + R+ PG  N
Sbjct: 430 VSIIKKELAGHIAKSGVGYLEAHNFETVDAKGAHV---NASAESIERGGVVVREKPGPKN 486

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSR 365
           ++   K  F +  + Y+H TP   LF    R  + GCVRV +   L VW+L++TP  W  
Sbjct: 487 SLGLIKFMFPNEYDIYLHSTPAQQLFARSRRDFSHGCVRVEHPDQLAVWVLQNTPRNWDL 546

Query: 366 YHIEEVVKTRKTT-PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             + + ++       V L  ++P+   Y +A   ++  + F DDIY  D
Sbjct: 547 QKVTDAMQNGADNHQVNLTKQIPIVIFYATARVDENGQVDFFDDIYHYD 595


>gi|256369387|ref|YP_003106895.1| hypothetical protein BMI_I960 [Brucella microti CCM 4915]
 gi|255999547|gb|ACU47946.1| hypothetical protein BMI_I960 [Brucella microti CCM 4915]
          Length = 572

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 279 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 337

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 338 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 397

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 398 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 456

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 457 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 514

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 515 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 555


>gi|260566489|ref|ZP_05836959.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
 gi|260156007|gb|EEW91087.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
          Length = 634

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 341 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 399

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 400 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 459

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 460 NEMLPKVMRDTSYL-DRNGYKVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 518

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 519 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 576

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 577 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|16273554|ref|NP_439809.1| hypothetical protein HI1667 [Haemophilus influenzae Rd KW20]
 gi|260581261|ref|ZP_05849079.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1176067|sp|P44285|Y1667_HAEIN RecName: Full=Putative L,D-transpeptidase HI_1667
 gi|1574515|gb|AAC23312.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260092088|gb|EEW76033.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 489

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 131/241 (54%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S + 
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIDN 353

Query: 294 P-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 470

Query: 413 D 413
           D
Sbjct: 471 D 471


>gi|86748553|ref|YP_485049.1| hypothetical protein RPB_1428 [Rhodopseudomonas palustris HaA2]
 gi|86571581|gb|ABD06138.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 718

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 149/318 (46%), Gaps = 28/318 (8%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV- 169
           V +LR +L I+ D D     S  +DA V  AV+ FQ    L P+G++D  T++A+N P  
Sbjct: 350 VPQLRAKLGITEDAD-----STTYDAKVAEAVRKFQRGADLKPTGILDDRTVKALNTPKR 404

Query: 170 DLRIRQLQVNLMRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           D  I  + VN+ R + L  Q     +G  YV++N+P  +L+ + NG     + V++G+  
Sbjct: 405 DRTIDTIMVNMERWRWLPRQLGAASLGDAYVILNVPDYTLKLMHNGAQVWTTRVVIGKPG 464

Query: 226 RQ-TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           +  TP+L   +  I  NP W +P SII  + +  L QDP  L    + M   +   + + 
Sbjct: 465 KHATPLLTETMKYITVNPTWNVPPSIINNEYLPALAQDPTVLDRMGLKMSRNRDGSIHIS 524

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                          Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+
Sbjct: 525 ---------------QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAREERAFSHGCM 569

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           RV+N       LL        Y   ++  +  R    +   T +PV+  Y +A+   D  
Sbjct: 570 RVQNPDQYAAALLNIAMPDKDYTPAKIRSMYGRSEVNLNFPTPIPVNITYQTAFVDDDGK 629

Query: 403 IQFRDDIYGLDNVHVGII 420
           +Q R D+YG D   + ++
Sbjct: 630 LQLRKDVYGRDARMLALL 647


>gi|261325062|ref|ZP_05964259.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|261301042|gb|EEY04539.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
          Length = 666

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 373 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 431

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 432 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 491

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 492 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 550

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 551 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 608

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 609 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|227536728|ref|ZP_03966777.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243420|gb|EEI93435.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 488

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 13/233 (5%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRV-------------DRQTPILHSRINRIMF 240
           +Y++VNIP   L  V+N K      V VG               + +TP+L   ++R+  
Sbjct: 243 KYIIVNIPEQKLRMVDNRKTKEVMNVCVGETIYGPYARRAGATDNHETPVLSGELDRMQV 302

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W IP SI++K++++ LR +P YL+  N+   ++KG+ V    VDW+S    NF F+Q
Sbjct: 303 NPVWNIPASIVKKELISSLRSNPNYLESRNMVAYNKKGQMVDPNTVDWSSDSVLNFKFKQ 362

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           +PG  N++ + K  F +  + Y+HDTP   +F+   R  + GCVRV     L  +L+ D 
Sbjct: 363 NPGADNSLGNIKFIFSNPYSIYLHDTPAKQMFSAKNRAVSHGCVRVEKPAALAAFLVNDE 422

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               +   E      K+  V +   +PV+  Y + W   +  +    DIYG D
Sbjct: 423 KKAEQIATEIADTLNKSRWVMMKKTIPVYITYYTTWVDDEGKLYKLPDIYGYD 475


>gi|294852310|ref|ZP_06792983.1| cell wall degradation protein [Brucella sp. NVSL 07-0026]
 gi|294820899|gb|EFG37898.1| cell wall degradation protein [Brucella sp. NVSL 07-0026]
          Length = 666

 Score =  128 bits (322), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 373 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 431

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 432 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 491

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 492 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 550

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 551 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMATAVLGTSVKNLDKYF-- 608

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 609 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|306840472|ref|ZP_07473231.1| cell wall degradation protein [Brucella sp. BO2]
 gi|306289487|gb|EFM60705.1| cell wall degradation protein [Brucella sp. BO2]
          Length = 666

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 373 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 431

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 432 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 491

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 492 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 550

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 551 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 608

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 609 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|256061060|ref|ZP_05451216.1| cell wall degradation protein [Brucella neotomae 5K33]
          Length = 670

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 377 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 435

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 436 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 495

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 496 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 554

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 555 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 612

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 613 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|301170424|emb|CBW30030.1| conserved hypothetical protein [Haemophilus influenzae 10810]
          Length = 487

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 130/241 (53%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 235 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMYS 291

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 292 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 351

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     L
Sbjct: 352 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQL 410

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 411 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 468

Query: 413 D 413
           D
Sbjct: 469 D 469


>gi|254701720|ref|ZP_05163548.1| cell wall degradation protein [Brucella suis bv. 5 str. 513]
 gi|261752272|ref|ZP_05995981.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|261742025|gb|EEY29951.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
          Length = 634

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 341 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 399

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 400 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 459

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 460 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 518

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 519 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 576

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 577 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|319896895|ref|YP_004135090.1| hypothetical protein HIBPF05750 [Haemophilus influenzae F3031]
 gi|317432399|emb|CBY80754.1| conserved hypothetical protein [Haemophilus influenzae F3031]
          Length = 489

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 130/241 (53%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 353

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 470

Query: 413 D 413
           D
Sbjct: 471 D 471


>gi|152992423|ref|YP_001358144.1| hypothetical protein SUN_0829 [Sulfurovum sp. NBC37-1]
 gi|151424284|dbj|BAF71787.1| hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 405

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 134/252 (53%), Gaps = 16/252 (6%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           +R++++++ RIK L++  +G  YVLVNIP   +  +EN K  +   VI G+ D QTPI  
Sbjct: 152 LRKVRMSIERIK-LMKPGLGKTYVLVNIPEFRVRVIENDKTSIAMGVITGKKDHQTPIFS 210

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM-----IDEKG---KEVFVE 284
             +  I+ NP W +P SI + +++  L +DP YLK + + M     +D        V + 
Sbjct: 211 ENLQYIVLNPTWNVPDSIARNEVIPKLLKDPGYLKKHRLVMRRDYNLDSPALSPGSVNLR 270

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                  + P F F + P   NA+   K  F + ++ YMHDTP   LF   VR  + GCV
Sbjct: 271 AYKGGKGDVP-FKFIEVPSDKNALGRVKFIFPNHHSVYMHDTPTKYLFKRNVRAYSHGCV 329

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVK---TRKTTPVKLATEVPVHFVYISAWSPKDS 401
           R++N   +  +L   T  ++ Y  EE ++   + KT  +K+   +PVH  Y++A+  +D 
Sbjct: 330 RLQNPKLMLKYL---TEHYTNYSFEEAMEKYNSYKTQYMKIIKPLPVHTAYLTAYVEEDG 386

Query: 402 IIQFRDDIYGLD 413
            ++   DIYGLD
Sbjct: 387 TLKVFPDIYGLD 398


>gi|329123250|ref|ZP_08251818.1| hypothetical protein HMPREF9095_1036 [Haemophilus aegyptius ATCC
           11116]
 gi|327471459|gb|EGF16907.1| hypothetical protein HMPREF9095_1036 [Haemophilus aegyptius ATCC
           11116]
          Length = 487

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 130/241 (53%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 235 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYS 291

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 292 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 351

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     L
Sbjct: 352 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQL 410

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 411 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 468

Query: 413 D 413
           D
Sbjct: 469 D 469


>gi|325578156|ref|ZP_08148291.1| hypothetical protein HMPREF9417_1032 [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325159892|gb|EGC72021.1| hypothetical protein HMPREF9417_1032 [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 497

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 133/243 (54%), Gaps = 7/243 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + + + G   + VNIP+  L+   +GK  L S VIVG+ +R+TP+++S
Sbjct: 246 KKLALNAQRLRVIPDFENG---IFVNIPSYQLKYYRDGKAILESRVIVGKNERRTPVMYS 302

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           R++ ++ NP W  P  +I +D++  L++DP Y   +N  ++D KG  +    ++W+S  +
Sbjct: 303 RLSNVVVNPPWNAPTRLINEDILPKLKRDPGYAAAHNYSILDSKGNTIDPYSINWSSIGD 362

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LF+   R  +SGCVRV     L
Sbjct: 363 RFPYRIRQAAGD-SALGNYKFNMPSSDAIYLHDTPNHNLFSKKDRALSSGCVRVEKSDQL 421

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LL++   WS      V+ ++KTT   + T  PV   Y++AW  ++   Q   DIY  
Sbjct: 422 ASILLQEA-GWSEDRKRNVLASKKTTSANIRTNDPVFLYYVTAWV-ENGQTQVLPDIYKY 479

Query: 413 DNV 415
           D+ 
Sbjct: 480 DDA 482


>gi|68250268|ref|YP_249380.1| hypothetical protein NTHI1968 [Haemophilus influenzae 86-028NP]
 gi|148827093|ref|YP_001291846.1| hypothetical protein CGSHiGG_02060 [Haemophilus influenzae PittGG]
 gi|319776086|ref|YP_004138574.1| hypothetical protein HICON_14350 [Haemophilus influenzae F3047]
 gi|68058467|gb|AAX88720.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|148718335|gb|ABQ99462.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae PittGG]
 gi|309750756|gb|ADO80740.1| Putative murein L,D-transpeptidase [Haemophilus influenzae R2866]
 gi|317450677|emb|CBY86897.1| conserved hypothetical protein [Haemophilus influenzae F3047]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 130/241 (53%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 353

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 470

Query: 413 D 413
           D
Sbjct: 471 D 471


>gi|148558873|ref|YP_001258930.1| cell wall degradation protein [Brucella ovis ATCC 25840]
 gi|148370130|gb|ABQ60109.1| cell wall degradation protein [Brucella ovis ATCC 25840]
          Length = 656

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 140/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 363 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 421

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   + ++  ++FNP W +PRSII 
Sbjct: 422 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYDKVQTVVFNPSWGVPRSIIL 481

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 482 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 540

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 541 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 598

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 599 ----GKDERDIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 639


>gi|309972939|gb|ADO96140.1| Putative murein L,D-transpeptidase [Haemophilus influenzae R2846]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 130/241 (53%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 353

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 470

Query: 413 D 413
           D
Sbjct: 471 D 471


>gi|145631483|ref|ZP_01787252.1| hypothetical protein CGSHi22421_02471 [Haemophilus influenzae
           R3021]
 gi|144982913|gb|EDJ90426.1| hypothetical protein CGSHi22421_02471 [Haemophilus influenzae
           R3021]
          Length = 489

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 130/241 (53%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 353

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNHGLFNRKNRALSSGCVRIEKSDQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 470

Query: 413 D 413
           D
Sbjct: 471 D 471


>gi|229846898|ref|ZP_04467005.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae 7P49H1]
 gi|229810387|gb|EEP46106.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae 7P49H1]
          Length = 489

 Score =  127 bits (320), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 130/241 (53%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 353

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSEQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 470

Query: 413 D 413
           D
Sbjct: 471 D 471


>gi|255623270|ref|XP_002540350.1| conserved hypothetical protein [Ricinus communis]
 gi|223496506|gb|EEF22033.1| conserved hypothetical protein [Ricinus communis]
          Length = 249

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 132/270 (48%), Gaps = 27/270 (10%)

Query: 80  KAIAFYQDILSRGGW---PELPIRPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVA-- 133
           K +  Y+D+ ++GGW   PE P  PL LG+     + +L  RL I    DP+  +  A  
Sbjct: 1   KGLVVYRDLAAKGGWALIPEGP--PLKLGDKGDPRITQLEARLAIE---DPTIAVDKAPV 55

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FD  ++ A+   Q R GL+P G++   TL A+NVPV LRI Q+  N+ R + L E+    
Sbjct: 56  FDEALQQALMRAQKRFGLNPDGVLGKGTLAALNVPVQLRIDQIVANMERWRWLPEELPAD 115

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R + VNI AA +    +    L    + GR   +TP+L S+I+ I+ NP W +P SI  K
Sbjct: 116 R-IQVNIAAAVMSVFHHDAPTLTMRAVTGRPGDETPMLQSQIHSIVLNPPWNVPSSIATK 174

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           ++    R +P YL  N+  +I  +G    ++               Q  G   A+   K 
Sbjct: 175 ELWPKERANPGYLARNDFIVIPTEGGGTRLQ---------------QKAGDKAALGLVKF 219

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
           +F +    Y+HDTP    F +  R  + GC
Sbjct: 220 DFNNPYGVYLHDTPSRAKFASYSRLASHGC 249


>gi|145633343|ref|ZP_01789074.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 3655]
 gi|145634471|ref|ZP_01790181.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittAA]
 gi|144986189|gb|EDJ92779.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 3655]
 gi|145268451|gb|EDK08445.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittAA]
          Length = 489

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 130/241 (53%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 353

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSEQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 470

Query: 413 D 413
           D
Sbjct: 471 D 471


>gi|197105669|ref|YP_002131046.1| peptidoglycan-binding domain 1 [Phenylobacterium zucineum HLK1]
 gi|196479089|gb|ACG78617.1| peptidoglycan-binding domain 1 [Phenylobacterium zucineum HLK1]
          Length = 605

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 27/294 (9%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           A+D  +E AV+ FQ  HGL  +G  D +TLEA+N       R ++ NL R   L     G
Sbjct: 308 AYDEVLEGAVRAFQRAHGLPDTGRADRTTLEALNAGAAHYERLVEANLERASAL-PASFG 366

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            R++LV+  A  L   ++G+      V+ G+  + TP++   ++ ++FNPYW +P  ++Q
Sbjct: 367 ERFILVDAAAGQLWYYDHGQQLAAMKVVTGKPSQPTPMMVGMVSHLIFNPYWNVPEDLVQ 426

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE-----------EVDWNSPEPPNFI--FR 299
             +       P+ L ++ +  I+E+G EV  +            VDW +          R
Sbjct: 427 TSIA------PKVL-EHGLGYIEEEGLEVLSDYTADAVVLDPAAVDWRAVAAGALSVRVR 479

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N M   K+   +    Y+HDTP    F    R  +SGCVR+ + + L   L   
Sbjct: 480 QKPGPKNMMGKVKLMLPNPLGIYLHDTPHRGDFARSQRLASSGCVRLEDAMSLARLLAGG 539

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               +   +    +      + LA   PV+  Y++A    D  I FR D+YGLD
Sbjct: 540 DKAEAALAVGGEERR-----IDLAEPAPVYITYLTAAPTSDGFI-FRPDVYGLD 587


>gi|265984050|ref|ZP_06096785.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|264662642|gb|EEZ32903.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
          Length = 660

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 367 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 425

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 426 KRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 485

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 486 NEMLPKVMRDTSYL-DRNGYEVYVNGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 544

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 545 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 602

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 603 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|146338286|ref|YP_001203334.1| putative signal peptide [Bradyrhizobium sp. ORS278]
 gi|146191092|emb|CAL75097.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS278]
          Length = 691

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 156/322 (48%), Gaps = 28/322 (8%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S   V +LR +L ++ +LD      + +DA V +AV+ FQ    L P+G++D  T++A+N
Sbjct: 318 SDPRVPKLRAKLGLTENLD-----DIRYDAKVAAAVRKFQDSVDLKPTGVLDDRTVKALN 372

Query: 167 VPV-DLRIRQLQVNLMR----IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
            P  D +I  + VN+ R     ++L    +G  YV++NIP  +L+ +++G     + V+ 
Sbjct: 373 TPKRDKQIDTVIVNMERWRWLPRELGAPAIGNAYVILNIPDYTLKVMQHGAQVWTTRVVT 432

Query: 222 GRVDRQ-TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           G+  +  TP+L   +  I  NP W +P SII  + +  L+QDP  L    + +   +   
Sbjct: 433 GKPGQHATPLLSETMKFITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLRLERARDGS 492

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           + +                Q PG+ NA+   +  F ++   Y HDTP+  LF    R  +
Sbjct: 493 IHIS---------------QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAKEDRAFS 537

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV--KLATEVPVHFVYISAWSP 398
            GC+RV+        LL  T    RY  E +     ++ +  K  T +PV+  Y +A+  
Sbjct: 538 HGCMRVQYPDQYASVLLNLTMPGERYTPERIRGMYGSSEIDLKFPTPIPVNITYQTAFVD 597

Query: 399 KDSIIQFRDDIYGLDNVHVGII 420
               +QFR D+YG D   + I+
Sbjct: 598 DAGKLQFRKDVYGRDATMIAIL 619


>gi|306838973|ref|ZP_07471795.1| cell wall degradation protein [Brucella sp. NF 2653]
 gi|306405940|gb|EFM62197.1| cell wall degradation protein [Brucella sp. NF 2653]
          Length = 666

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 373 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 431

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 432 KRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 491

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 492 NEMLPKVMRDTSYL-DRNGYEVYVNGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 550

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 551 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 608

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 609 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|212635459|ref|YP_002311984.1| hypothetical protein swp_2663 [Shewanella piezotolerans WP3]
 gi|212556943|gb|ACJ29397.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 457

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 165/372 (44%), Gaps = 23/372 (6%)

Query: 49  NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSS 108
           N RFD  L   +          S + I      I  Y+  LS   WP+L      LG  +
Sbjct: 95  NKRFDELLTFAE----------SNKQIKALRDKIRQYEQ-LSNYQWPQLEASVFSLGQRA 143

Query: 109 VSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             + +LR  L+   DL   D S      FD  +  ++K FQ RHGL  SG ++  T+  +
Sbjct: 144 TDIAKLRWVLVKLDDLEFKDISAYREAIFDPSITRSLKRFQKRHGLIQSGELNKETITLL 203

Query: 166 NVPVDLRIRQLQVNLM-RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           N      + +LQ++L  ++ K+  Q     Y+ VNIP   L    +    L   VIVG +
Sbjct: 204 NTEPAFIVSKLQLSLKDKLSKVNYQNSS--YIEVNIPEFKLRIKGDESSTLEFPVIVGSI 261

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
             +TP+LH+ +++I  NP W  PRSI+  +++A L++ P+ L++    ++ +KG    V+
Sbjct: 262 KNKTPLLHTYVSKITINPTWTPPRSIVYNELLAELKKSPKSLENQKFVLV-KKGNTNEVK 320

Query: 285 EVDWNSP-----EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            +          E   +   Q PG  NA+   +    +    +MHDTP+   F    R  
Sbjct: 321 SLKGMDASRLKQELKVYQLVQSPGFRNALGKYRFTIPNSELIFMHDTPDKQAFKKRNRAI 380

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           + GC+R+     L  +L+    +          K   T  +KL   +P+     + W  K
Sbjct: 381 SHGCIRLSQPELLAKYLIDRENSIESIRFLSARKGVNTVDIKLRNPIPIIITNHNVWVDK 440

Query: 400 DSIIQFRDDIYG 411
           D+++Q R  +Y 
Sbjct: 441 DNVLQVRPSVYN 452


>gi|75675184|ref|YP_317605.1| hypothetical protein Nwi_0991 [Nitrobacter winogradskyi Nb-255]
 gi|74420054|gb|ABA04253.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 811

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 150/311 (48%), Gaps = 28/311 (9%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV- 169
           V ++R RL ++ + D ++     FDA V +AV+ FQ RH L P G++ ++T+ A+N P  
Sbjct: 440 VPQIRARLGVTQNPDDTR-----FDADVAAAVREFQARHHLKPDGILGNNTIRALNGPKK 494

Query: 170 DLRIRQLQVNLMR----IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           D  I  +  N+ R     ++L    +G  Y ++NIP  SL+ +++G     + V+VG+  
Sbjct: 495 DHTIDTIIANMERWRWLPRELGAPSLGDAYAILNIPDYSLKVMQHGAPIWSTRVVVGKPG 554

Query: 226 -RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
              TP+L   +  I  NP W +P SII K+ +  L+QDP  L    + +  ++   + + 
Sbjct: 555 LHATPLLTETMKYITVNPTWNVPPSIIYKEYLPALQQDPTVLSRMGLKLERDRNGGIHIS 614

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                          Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+
Sbjct: 615 ---------------QPPGERNALGRIRFNFPNKFLVYQHDTPDKHLFAKEKRAFSHGCM 659

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           RV+N       LL        Y  E+V  +  R    +   T  PVH  Y +A+  +   
Sbjct: 660 RVQNPDQYAATLLNIVLPQEHYTPEKVRSMYGRNEFNINFPTPFPVHITYQTAFVDQAGK 719

Query: 403 IQFRDDIYGLD 413
           +Q R D+YG D
Sbjct: 720 LQLRGDVYGRD 730


>gi|254719057|ref|ZP_05180868.1| cell wall degradation protein [Brucella sp. 83/13]
          Length = 670

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 377 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 435

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 436 KRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 495

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 496 NEMLPKVMRDTSYL-DRNGYEVYVNGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 554

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 555 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 612

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 613 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|294011534|ref|YP_003544994.1| putative peptidoglycan binding domain protein [Sphingobium
           japonicum UT26S]
 gi|292674864|dbj|BAI96382.1| putative peptidoglycan binding domain protein [Sphingobium
           japonicum UT26S]
          Length = 484

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 159/347 (45%), Gaps = 45/347 (12%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            K +A Y+ I   GGWP L         +  S   +R R+ I          SV     +
Sbjct: 157 RKGLANYERIRDAGGWPTL--------TAQSSPDVVRARIAIEDK-------SVTPGEKL 201

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
              ++  Q R+GL+P+G++D+ TL  +NVPVD RI  +  N+ R  + + +++ +  V V
Sbjct: 202 VDVLQRAQRRYGLNPTGLLDARTLRELNVPVDDRIAAIMANMERW-RWMPRQLPVNRVQV 260

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM--- 255
           NI AA L   E  +       + G  D  TP+L S I+ I+ NP W +P SI ++++   
Sbjct: 261 NIAAAVLTVFEGDQPVTSMRAVTGAPDNATPMLVSSIHSIVVNPPWNVPASIAKRELWPK 320

Query: 256 --MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
              AL+RQ         I    E G+ +         P  PN          +A+   K 
Sbjct: 321 GRAALIRQ------GYKIVGTPETGERIV-------QPAGPN----------SALGRLKF 357

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
           +F +    Y+HDTP    F++  R  + GC+R+   + L   ++   P  +   I+ ++ 
Sbjct: 358 DFNNPFAVYLHDTPSRAKFSSYDRLASHGCIRLEKPVPLAELMVASDPDLA-GKIQSLID 416

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           T KT  V L  EV V+ +Y +A++  +  + FR D YG D +    I
Sbjct: 417 TGKTQRVSLPKEVAVYLLYWTAFAGNNGTMNFRSDPYGWDKLLAAKI 463


>gi|209884231|ref|YP_002288088.1| peptidoglycan-binding domain 1 [Oligotropha carboxidovorans OM5]
 gi|209872427|gb|ACI92223.1| peptidoglycan-binding domain 1 [Oligotropha carboxidovorans OM5]
          Length = 712

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 145/295 (49%), Gaps = 23/295 (7%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV-DLRIRQLQVNLMR----IKKLLE 188
           +DA V +AV+ FQ  +GL  +G++D  TL A+N P  D +I  ++VN+ R     + L  
Sbjct: 366 YDATVATAVRKFQAANGLKATGVLDKQTLAALNGPKNDRKIDIVRVNMERWRWLPRDLGA 425

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ-TPILHSRINRIMFNPYWVIP 247
           + +G  YV++NIP  SL+ + NG    ++ V+VG+  +  TP L   +  I  NP W +P
Sbjct: 426 KALGDAYVVLNIPDYSLKLMHNGAPVWKTRVVVGKPGKHATPELTETMKYITVNPTWNVP 485

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SII  + +  L+QDP  L+   + +       + +                Q PG+ NA
Sbjct: 486 PSIIYNEYLPALQQDPTVLERMGLKLQRNPDGTIRIS---------------QPPGERNA 530

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL        Y 
Sbjct: 531 LGRIRFNFPNKFLVYQHDTPDKHLFAKTERAFSHGCMRVQNPDQYAANLLSIALPKDHYT 590

Query: 368 IEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            E++  +  R    +   T +PV+ VY +A+     +++FR DIYG D   + ++
Sbjct: 591 PEKIRGMYGRSEININFPTPIPVNIVYHTAFVDDAGVLEFRKDIYGRDARMISLL 645


>gi|154246011|ref|YP_001416969.1| peptidoglycan binding domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154160096|gb|ABS67312.1| Peptidoglycan-binding domain 1 protein [Xanthobacter autotrophicus
           Py2]
          Length = 672

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 152/327 (46%), Gaps = 33/327 (10%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   IRP   G S   +  LR RL ++G   P+     A+D  +  AVK FQ    + P+
Sbjct: 342 PGAQIRP---GASDPRIPTLRTRLGVTGR--PAD--DNAYDPALVDAVKAFQEASKIKPT 394

Query: 155 GMVDSSTLEAMNV---PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           G+V  ST+ A+N    P    ++   +  M   + L + +G  YV+VNIP   +   ++G
Sbjct: 395 GIVGPSTIAALNAGATPGGGSLKSDVIANMERWRWLPRDLGESYVMVNIPEFLVRIYQSG 454

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
                + V+VG+ +  TP+L   +  I+ NP W IP SI + +MM LLR DP  L    I
Sbjct: 455 HEIHETRVVVGKPETPTPLLSREMQYIVVNPAWNIPPSIARNEMMPLLRSDPSALSRRGI 514

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            ++                     + FRQ P + NA+   K  F + ++ Y+HDTP   L
Sbjct: 515 EVVRNGSG---------------GYSFRQVPSERNALGRIKFMFPNDHSVYLHDTPSKAL 559

Query: 332 FNNVVRFETSGCVRVRNIID-----LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           F N  R  + GCVRV   +       ++ L  D   W++  I ++  + +   V L    
Sbjct: 560 FQNDRRAYSHGCVRVYEPLKFGEVIFNLGLPND--HWTQTRIGKMFGSSERY-VNLKQRF 616

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLD 413
           PVH VY +        +  R+D+YG++
Sbjct: 617 PVHIVYFNVVVDDAGRLAVREDLYGIN 643


>gi|149277939|ref|ZP_01884078.1| putative periplasmic protein [Pedobacter sp. BAL39]
 gi|149231137|gb|EDM36517.1| putative periplasmic protein [Pedobacter sp. BAL39]
          Length = 501

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 130/269 (48%), Gaps = 34/269 (12%)

Query: 174 RQLQVNLMRIK---KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR------- 223
           R L+ NL R++   K  +QK    YVLVNI   +L+ V+N K  L+  V VG        
Sbjct: 222 RVLKANLERLRWKNKPTQQK----YVLVNIADFTLDVVDNNKSVLKMKVCVGEGRNENFK 277

Query: 224 -----------------VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
                              R+TP L+S I+ +  NP W IP SI  K++     +D  YL
Sbjct: 278 DRVLKEYDETGLKKDRPFSRETPQLNSMIHSVQVNPVWNIPESIATKEISRYAAKDRFYL 337

Query: 267 KDNNIHMIDEKGKEVF-VEEVDWNSPEPPN-FIFRQDPGKINAMASTKIEFYSRNNTYMH 324
            +NNI +  E GK +   E +D+++ +  + + F+Q PG  N++   K  F +  + Y+H
Sbjct: 338 SNNNIDVF-ENGKRIEDPETIDFSAGDAGSRYTFKQRPGNDNSLGKIKFLFKNDESVYLH 396

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP    F+  VR  + GCVRV    +L   L  D   +     E   K      + L+ 
Sbjct: 397 DTPAKAAFDLPVRAVSHGCVRVEKPSELAKALFGDGQKYQTIQKEMQSKQPVAKDISLSP 456

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +VPV+  Y +AW  +   +QFR DIYGLD
Sbjct: 457 QVPVYLTYFTAWKDEQGNMQFRKDIYGLD 485


>gi|307294368|ref|ZP_07574212.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum
           L-1]
 gi|306880519|gb|EFN11736.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum
           L-1]
          Length = 485

 Score =  126 bits (317), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 159/347 (45%), Gaps = 45/347 (12%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            K +A Y+ I   GGWP L         +  +   +R R+ I          SV     +
Sbjct: 158 RKGLANYERIRDAGGWPTL--------TAQSAPDVVRARVAIEDK-------SVTPGEKL 202

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
              ++  Q R+GL+P+G++D+ TL  +NVPVD RI  +  N+ R  + + +++ +  V V
Sbjct: 203 VDVLQRAQRRYGLNPTGLLDTRTLRELNVPVDDRIAAIMANMERW-RWMPRQLPVNRVQV 261

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM--- 255
           NI AA L   E  +       + G  D  TP+L S I+ I+ NP W +P SI ++++   
Sbjct: 262 NIAAAVLTVFEGDEPVTSMRAVTGAPDNATPMLVSSIHSIVVNPPWNVPASIAKRELWPK 321

Query: 256 --MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
              AL+RQ         I    E G+ +         P  PN          +A+   K 
Sbjct: 322 GRAALIRQ------GYKIVGTPETGERIV-------QPAGPN----------SALGRLKF 358

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
           +F +    Y+HDTP    F++  R  + GC+R+   + L   ++   P  +   I+ ++ 
Sbjct: 359 DFNNPFAVYLHDTPSRAKFSSYDRLASHGCIRLEKPVPLAELMMAGNPDLA-GKIQSLID 417

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           T KT  V L  EV V+ +Y +A++  +  + FR D YG D +    I
Sbjct: 418 TGKTQRVSLPREVAVYLLYWTAFASNNGTMSFRSDPYGWDKLLAAKI 464


>gi|146329173|ref|YP_001209233.1| lipoprotein [Dichelobacter nodosus VCS1703A]
 gi|146232643|gb|ABQ13621.1| conserved hypothetical lipoprotein [Dichelobacter nodosus VCS1703A]
          Length = 505

 Score =  126 bits (317), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 5/238 (2%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L +N+ R++  + Q  G +YV+ NIPA ++E   + +    +  +VGR DR TP   ++I
Sbjct: 260 LIINMERLR-WMPQDWGEQYVITNIPAFNVEMYRDERKIYETRAVVGRADRATPRFINKI 318

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
             ++ NP W +P +I+++D +  L+ +P    D +   +   GK      V W+  E   
Sbjct: 319 QHVVINPTWTVPPTIMRQDKLPKLKNNPAAF-DASYEAVSASGKIAKPSSVSWS--EGNG 375

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +  RQ  G+ NA+   K  F +++  YMHDTP   LF    R  +SGC+R++  ++L   
Sbjct: 376 YSLRQKSGQYNALGRVKFLFPNKHAIYMHDTPTRHLFKQNNRARSSGCIRLQKPLELAEI 435

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           LL D   W+   I+  +   K   V    E PV+ VY + +   ++ I+   D+YGLD
Sbjct: 436 LLADN-GWNAQKIQASIAKEKQQWVNPVKETPVYLVYWTTYVDANNTIKTTPDVYGLD 492


>gi|254710055|ref|ZP_05171866.1| hypothetical protein BpinB_07218 [Brucella pinnipedialis B2/94]
 gi|256031550|ref|ZP_05445164.1| hypothetical protein BpinM2_12995 [Brucella pinnipedialis
           M292/94/1]
 gi|261317602|ref|ZP_05956799.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|265988636|ref|ZP_06101193.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
 gi|261296825|gb|EEY00322.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|264660833|gb|EEZ31094.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
          Length = 556

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 142/286 (49%), Gaps = 14/286 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 263 YDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 321

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 322 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 381

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 382 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 440

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +       ++ 
Sbjct: 441 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS-------VKN 493

Query: 371 VVK--TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + K   +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 494 LDKYFGKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 539


>gi|326336070|ref|ZP_08202242.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325691579|gb|EGD33546.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 559

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 149/329 (45%), Gaps = 11/329 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++   +G +  ++  LR  L   G   P +G     D+ +  AVK FQ   G+   G+  
Sbjct: 229 LKSYGIGYADSTILALRAHLEYKGYKSPVQGEPQQVDSLLIEAVKEFQRSIGIPADGIPG 288

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           + T+  + + +  +   L +N+ R++    + +G  Y+LVNIP   L       +   + 
Sbjct: 289 ALTMNYLQMNIKQKRDLLLLNMERLR-WQNKDLGEDYILVNIPEYCLRLFHKDSLMFETR 347

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK-DNNIHMIDEK 277
           V+VG     TPI    +  I F P W +P+SI++K+M+  +      LK     + + E 
Sbjct: 348 VVVGNPKTPTPIFSDSLRYIEFRPTWSVPQSIVRKEMIPNIISSGDSLKYAKRGYKLYEN 407

Query: 278 GKEVFVEEVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
            KE+   +V+W   +     F F +DP + N++   K   Y+  + Y+HDTP   LF N 
Sbjct: 408 NKEIDPTQVNWKDDQLHKRIFYFVEDPSERNSLGLVKFVLYNDMSIYLHDTPSKRLFGNT 467

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV---- 391
            R  + GC+RV        +LLK +  W    + E + T K    +       HFV    
Sbjct: 468 QRTYSHGCIRVEYPDQFATYLLKSSEDWDEQKVREAMDTGKN---QYRVHPKKHFVIDIS 524

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           Y++AW  K   +  R+D Y  D   + ++
Sbjct: 525 YLTAWVDKKGNLIIRNDPYQFDKEQLKVL 553


>gi|94498521|ref|ZP_01305077.1| peptidoglycan binding domain protein [Sphingomonas sp. SKA58]
 gi|94422064|gb|EAT07109.1| peptidoglycan binding domain protein [Sphingomonas sp. SKA58]
          Length = 484

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 171/353 (48%), Gaps = 48/353 (13%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
           P    ET+ Q    +A Y+ I  +GGW           ++S S   +R+R+ +    DPS
Sbjct: 148 PWAGYETLRQ---GLARYEAIRDQGGW--------QSLSASSSSDAIRKRIAME---DPS 193

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
               V+ D  +   ++  Q R+GL+P+G +D+ TL A+NV VD RI  +  N+ R +  +
Sbjct: 194 ----VSPDEKLADIIQRAQRRYGLNPTGNLDARTLAALNVGVDDRIAAIMANMERWR-WM 248

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            + + +  V VNI AA L   E  +       + G  D QTP+L S I+ I+ NP W +P
Sbjct: 249 PRSLPVNRVQVNIAAAVLTLFEGDQPVTSMRAVTGSPDNQTPMLSSSIHSIVVNPPWNVP 308

Query: 248 RSIIQKDMM-----ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            SI ++++       L+RQ  + +K         +G E  V+      P  PN       
Sbjct: 309 MSIARRELFPKGRATLIRQGYKIVK-------TPEGGERIVQ------PAGPN------- 348

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
              +A+   K +F +    Y+HDTP    F++  R  + GC+R+   + L   ++  +P 
Sbjct: 349 ---SALGRLKFDFNNPFAVYLHDTPARGKFSSYDRLASHGCIRLEKPVALAEQMVAASPD 405

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            +   I+ ++   KT  V L  +V V+ +Y +A++  D ++ FR+D YG D +
Sbjct: 406 LN-GQIQNLIDEGKTQRVSLPQDVAVYLLYWTAFANGDGVVSFRNDPYGWDKL 457


>gi|85716085|ref|ZP_01047061.1| hypothetical protein NB311A_10915 [Nitrobacter sp. Nb-311A]
 gi|85697084|gb|EAQ34966.1| hypothetical protein NB311A_10915 [Nitrobacter sp. Nb-311A]
          Length = 783

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 154/312 (49%), Gaps = 30/312 (9%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV- 169
           V ++R RL ++ + D ++     FDA V +AV+ FQ RH L P G++ ++T+ A+N P  
Sbjct: 413 VPQIRARLGMTQNPDDTR-----FDADVAAAVREFQARHHLKPDGILGNNTVRALNGPKK 467

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGL-----RYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           D  I  + VN+ R +  L +++G       Y ++NIP  SL+ +++G     + V+VG+ 
Sbjct: 468 DHTIDTIIVNMERWR-WLPRELGAPSLDDAYAILNIPDYSLKVMQHGAQIWSTRVVVGKP 526

Query: 225 D-RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
               TP+L   +  I  NP W +P SII K+ +  L+QDP  L    + +  ++   + +
Sbjct: 527 GLHATPLLTETMKYITVNPTWNVPPSIIYKEYLPALQQDPTVLSRMGLKLERDRNGGIHI 586

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
                           Q PG+ NA+   +  F ++   Y HDTP+  LF+   R  + GC
Sbjct: 587 S---------------QPPGERNALGRIRFNFPNKFLVYQHDTPDKHLFSKNKRAFSHGC 631

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           +RV+N       LL        Y  E++  +  R    +   T VPVH  Y +A+  +  
Sbjct: 632 MRVQNPDQYAATLLNIVLPQEHYTPEKIRSMYGRNEFNINFPTPVPVHITYQTAFVDQAG 691

Query: 402 IIQFRDDIYGLD 413
            +Q R D+YG D
Sbjct: 692 KLQLRADVYGRD 703


>gi|213420016|ref|ZP_03353082.1| hypothetical protein Salmonentericaenterica_20520 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 546

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 119/218 (54%), Gaps = 8/218 (3%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 316 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 375

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 376 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 432

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 433 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 492

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           +   K    S +  Y+HDTP   LF    R  +SGCVR
Sbjct: 493 LGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVR 530


>gi|265998101|ref|ZP_06110658.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
 gi|262552569|gb|EEZ08559.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
          Length = 660

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 367 YDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 425

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 426 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 485

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 486 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 544

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 545 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 602

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 603 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|256254952|ref|ZP_05460488.1| cell wall degradation protein [Brucella ceti B1/94]
          Length = 670

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 377 YDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 435

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 436 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 495

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 496 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 554

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 555 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 612

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 613 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|260168681|ref|ZP_05755492.1| cell wall degradation protein [Brucella sp. F5/99]
          Length = 666

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 373 YDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 431

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 432 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 491

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 492 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 550

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 551 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 608

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 609 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|261218691|ref|ZP_05932972.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|260923780|gb|EEX90348.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
          Length = 660

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 367 YDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 425

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 426 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 485

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 486 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 544

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 545 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 602

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 603 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|256159684|ref|ZP_05457437.1| cell wall degradation protein [Brucella ceti M490/95/1]
          Length = 666

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 373 YDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 431

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 432 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 491

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 492 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 550

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 551 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 608

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 609 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|261314301|ref|ZP_05953498.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|261321811|ref|ZP_05961008.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261758157|ref|ZP_06001866.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
 gi|261294501|gb|EEX97997.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261303327|gb|EEY06824.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|261738141|gb|EEY26137.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
          Length = 634

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 341 YDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 399

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 400 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 459

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 460 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 518

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 519 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 576

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 577 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|225627441|ref|ZP_03785478.1| cell wall degradation protein [Brucella ceti str. Cudo]
 gi|254706835|ref|ZP_05168663.1| cell wall degradation protein [Brucella pinnipedialis M163/99/10]
 gi|254714056|ref|ZP_05175867.1| cell wall degradation protein [Brucella ceti M644/93/1]
 gi|254716887|ref|ZP_05178698.1| cell wall degradation protein [Brucella ceti M13/05/1]
 gi|225617446|gb|EEH14491.1| cell wall degradation protein [Brucella ceti str. Cudo]
          Length = 670

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 377 YDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 435

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 436 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 495

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 496 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 554

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 555 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 612

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 613 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|312113144|ref|YP_004010740.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218273|gb|ADP69641.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 725

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 158/339 (46%), Gaps = 36/339 (10%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    +  +R+RL  +  LD  +     +D  +  AV  FQ   GL+ +G+VD     A
Sbjct: 322 GDDDAQIALIRKRL--NAGLDAPR--DTIYDEALLVAVNRFQKERGLNVNGIVDKKLRAA 377

Query: 165 MN----VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           +N      VD +  +L VN+ R +  +   +G  YV  +IP  +    + G+V  +  ++
Sbjct: 378 LNEGAGGSVDEKKMRLIVNMERWR-WMPDDLGEFYVWNSIPEQTTRVFDRGRVAFQERIV 436

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD-PQYLKDNNIHMIDE--- 276
           VG+   QTP   +++  ++FNP W +P  I   ++   LR+  P    D+    +     
Sbjct: 437 VGKPTSQTPSFSAKMQFVIFNPEWGVPDGIKANEIAPKLRRAAPSGPSDDLFSFLGGRSG 496

Query: 277 ---------------------KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                 G++V  + VDW+  +   + F Q  G  NA+   K  F
Sbjct: 497 GGGGGGASSVLQRLGGLRVTYNGRDVDPDSVDWSRVDARRYSFIQPAGPRNALGVVKFRF 556

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL-DVWLLKDTPTWSRYHIEEVVKT 374
            ++++ YMHDTPE  LF +  R  + GC+R +N +   +V L  D  T +   I   +++
Sbjct: 557 PNKHDVYMHDTPEKSLFGSATRAFSHGCMRTQNPVRFAEVILAYDNGT-TPEQIRRQIES 615

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            +TT  KL   +PVH VY +A   +   I++  D+YGLD
Sbjct: 616 GQTTENKLTKTIPVHMVYFTAAPDEKGDIRYFSDLYGLD 654


>gi|261222137|ref|ZP_05936418.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|260920721|gb|EEX87374.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
          Length = 634

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 341 YDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 399

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 400 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 459

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 460 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 518

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 519 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 576

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 577 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|42522163|ref|NP_967543.1| putative periplamic protein [Bdellovibrio bacteriovorus HD100]
 gi|39574694|emb|CAE78536.1| putative periplamic protein [Bdellovibrio bacteriovorus HD100]
          Length = 505

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 162/338 (47%), Gaps = 25/338 (7%)

Query: 94  WPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           WP LP   + L LG+    +  L+ R+   G   P   L   FD  V +AV   Q     
Sbjct: 160 WPALPKVKKTLKLGSKDAILIPLKTRMTQLGY--PMTSLDNVFDDKVVAAVNDIQWNLRF 217

Query: 152 DPSGMVD--SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
            P   +     T + +NV    R+RQ+++++ +++    Q    RY+ +N+  +    V+
Sbjct: 218 KPDSKISPGGKTWKYLNVSCQDRMRQIRLDMEKLR-WFPQHFEDRYIFINLAMSYFSLVD 276

Query: 210 NGKVGLRST---VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR-----Q 261
               G  S     I GR +R++P +  +I  I+ NP+WV+P +I ++D +  ++     +
Sbjct: 277 KSGGGFYSMSFRTINGRPERKSPTMKDKIVYIVINPFWVVPPTIFREDKVEEIKNLWPWE 336

Query: 262 DPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEP---PNFIFRQDPGKINAMASTKIEFYS 317
             +Y    +  + ++   + F    +DW + +P    N   RQ P ++NA+ S K    +
Sbjct: 337 IREYFDTRHYQVWNKSFTQRFDPASIDWYNMDPNQDANIYIRQSPHRMNALGSLKFMMTN 396

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT--- 374
               Y+HDT +  LF    R  +SGCVRV   +DL  +LLK T  W R  IE  +     
Sbjct: 397 SYAIYLHDTNQRELFAEPHRLLSSGCVRVEKPVDLAEYLLKGT-EWDRAAIERYMAKPGE 455

Query: 375 --RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
              K T V+L  ++PV+ V++++    D I++F +D Y
Sbjct: 456 VLDKDTKVQLKQQMPVYMVFLTSQLSSDGILRFAEDSY 493


>gi|329890356|ref|ZP_08268699.1| putative peptidoglycan binding domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328845657|gb|EGF95221.1| putative peptidoglycan binding domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 518

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 166/363 (45%), Gaps = 40/363 (11%)

Query: 83  AFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPS-----KGLSVAFDA 136
           A Y+ I  +GGWP   I   +  G S   +  L  RL   GDL  +     KG ++A+  
Sbjct: 178 ARYRRIARQGGWPAFRIGGTIEPGTSDPRIPALVARLAAEGDLSAAAAERLKG-NLAYGP 236

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +E AV+ FQ RHGL   G +  +T  ++    + R RQ+ +NL R ++ L++ +    +
Sbjct: 237 ELEQAVRSFQTRHGLGSDGRIGGATQRSLTATAEDRARQIALNLER-RRWLKRDLNPERI 295

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            VN  AA +   ++GK    + V+VG    QTP L      ++ NP W +P  I +++  
Sbjct: 296 EVNTAAAIMVYWKDGKPVHSNRVVVGTAANQTPSLEKPFASVVANPPWTVPMGIARRE-- 353

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
            +L + P YL  N++          +V    W           Q  G  +++ + K E  
Sbjct: 354 -ILPKGPGYLAANDM----------YVNADGW---------VVQRAGPKSSLGNVKFELQ 393

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK-TR 375
                ++HDTP    FN  VR  + GCVRV++ I     LL   P   R  + +  + + 
Sbjct: 394 DSYAIFLHDTPARGAFNLSVRQRSHGCVRVQDAIGFARLLLSPDP--ERLALFDAAQASG 451

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV---HVGI-IPLPE---DHPI 428
           +T  V     + V  +Y +A+      + FR+D+Y  D      +GI + LP+   D PI
Sbjct: 452 ETKRVTTGRNIGVRLLYWTAFVDGQGRVAFREDVYKRDAKLADALGIAVNLPQVIADAPI 511

Query: 429 DSD 431
           D D
Sbjct: 512 DPD 514


>gi|115526100|ref|YP_783011.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115520047|gb|ABJ08031.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           BisA53]
          Length = 705

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 154/318 (48%), Gaps = 28/318 (8%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV- 169
           V +LR +L I+ + D +K     +DA V +AV+ FQ    +  +G++D  T++A+N P  
Sbjct: 336 VPQLRAKLGITENADSTK-----YDAKVAAAVRKFQDATDIPVTGVLDDRTVKALNSPKR 390

Query: 170 DLRIRQLQVNLMRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           D +I  + VN+ R + L  Q     +G  YV++N+P  +L+ ++N      + V+ G+  
Sbjct: 391 DRQIDIVVVNMERWRWLPRQLGASSLGNAYVILNVPDFTLKVMQNDAAVWTTRVVTGKPG 450

Query: 226 RQ-TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           +  TP+L   +  I  NP W +P SII  + +  L+QDP  L    + +   +   + + 
Sbjct: 451 KHATPMLTETMKYITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRDGSIHIS 510

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                          Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+
Sbjct: 511 ---------------QPPGERNALGRIRFNFPNKFLVYQHDTPDKHLFARDERAFSHGCM 555

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           RV+N       LL  T    RY  E +  +  R    +K  T +PV+  Y +A+      
Sbjct: 556 RVQNPDQYAATLLNITMPNERYSPERIRGMYGRSEIDLKFPTPIPVNITYQTAFVDDSGK 615

Query: 403 IQFRDDIYGLDNVHVGII 420
           +Q R DIYG D   +G++
Sbjct: 616 LQIRKDIYGRDAAMIGLL 633


>gi|90425452|ref|YP_533822.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris BisB18]
 gi|90107466|gb|ABD89503.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris BisB18]
          Length = 730

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 156/322 (48%), Gaps = 28/322 (8%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-V 169
           V +LR +L IS + D     S  +DA V +AV+ FQ    L  +G++D  T+ A+N P  
Sbjct: 364 VPQLRAKLGISENPD-----STRYDAKVAAAVRKFQDSADLKETGVLDERTVTALNSPKS 418

Query: 170 DLRIRQLQVNLMR----IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV- 224
           D +I  + VN+ R     + L    +G  YV++NIP  +L+ +++G     + V+VG+  
Sbjct: 419 DRQIDTVIVNMERWRWLPRVLGAPSLGDAYVILNIPDYTLKVMQHGAPVWTTRVVVGKPG 478

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           +  TP+L   +  I  NP W +P SII  + +  L+QDP  L    + +   +   + + 
Sbjct: 479 NHATPLLTETMKYITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRDGSIHIS 538

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                          Q PG+ NA+   +  F ++   Y HDTP+  LF+   R  + GC+
Sbjct: 539 ---------------QPPGERNALGRIRFNFPNKFLVYQHDTPDKNLFSRDARAFSHGCM 583

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           RV+N       LL       RY  E++  +  +    +K AT +PV+  Y +A+      
Sbjct: 584 RVQNPDQYAATLLNIAMPNERYTPEKIRGMYGKSEIDLKFATPIPVNLTYQTAFVDDAGK 643

Query: 403 IQFRDDIYGLDNVHVGIIPLPE 424
           +Q R D+YG D   + I+  P+
Sbjct: 644 LQTRKDVYGRDAAMLAILRNPK 665


>gi|301156058|emb|CBW15529.1| predicted carboxypeptidase [Haemophilus parainfluenzae T3T1]
          Length = 489

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 129/243 (53%), Gaps = 7/243 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + + + G   + VNIP+  L+   +GKV L S VIVG+ +R+TP+++S
Sbjct: 238 KKLALNAQRLRIIPDFENG---IFVNIPSYQLKYYRDGKVLLESRVIVGKNERRTPVMYS 294

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           R++ ++ NP W  P  +I +D++  L++DP Y   +N  ++D  G  +    ++W+S   
Sbjct: 295 RLSNVVVNPPWNAPTRLINEDILPKLKRDPSYATAHNYSILDSNGNTINPHSINWSSIGN 354

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LF+   R  +SGCVRV     L
Sbjct: 355 KFPYRIRQAAGD-SALGNYKFNMPSSDAIYLHDTPNHSLFSKKDRALSSGCVRVEKSDQL 413

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   WS       + ++KT    + T  PV   Y++AW  ++       DIY  
Sbjct: 414 ASILLKEA-GWSEDKKRNALASKKTVSANIRTNDPVFLYYVTAWV-ENGQTHVLPDIYKY 471

Query: 413 DNV 415
           D+ 
Sbjct: 472 DDA 474


>gi|265994887|ref|ZP_06107444.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|262766000|gb|EEZ11789.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
          Length = 538

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 142/286 (49%), Gaps = 14/286 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 245 YDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 303

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 304 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 363

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 364 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 422

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +       ++ 
Sbjct: 423 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS-------VKN 475

Query: 371 VVK--TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + K   +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 476 LDKYFGKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 521


>gi|148258072|ref|YP_001242657.1| hypothetical protein BBta_6864 [Bradyrhizobium sp. BTAi1]
 gi|146410245|gb|ABQ38751.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 702

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 28/322 (8%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S   V +LR +L ++ + D      + +DA V +AV+ FQ    L P+G++D  T++A+N
Sbjct: 330 SDPRVPKLRAKLGLTENAD-----DIRYDAKVAAAVRKFQESADLKPTGVLDDRTVKALN 384

Query: 167 VPV-DLRIRQLQVNLMR----IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
            P  D +I  + VN+ R     + L    +G  YV++NIP  +L+ ++ G     + V+ 
Sbjct: 385 TPKRDKQIDTILVNMERWRWLPRDLGAPALGDAYVILNIPDYTLKVMQRGAQVWTTRVVT 444

Query: 222 GRVDRQ-TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           G+  +  TP+L   +  I  NP W +P SII  + +  L+QDP  L    + +   +   
Sbjct: 445 GKPGQHATPLLSETMKFITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLRLERARDGS 504

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           + +                Q PG+ NA+   +  F ++   Y HDTP+  LF    R  +
Sbjct: 505 IHIS---------------QPPGEANALGRIRFNFPNKFLVYQHDTPDKHLFAREDRAFS 549

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV--KLATEVPVHFVYISAWSP 398
            GC+RV+        LL       RY  E +     ++ +  K  T +PV+  Y +A+  
Sbjct: 550 HGCMRVQYPDQYASVLLNIAMPGERYTPERIRSMYGSSEIDLKFPTPIPVNITYQTAFVD 609

Query: 399 KDSIIQFRDDIYGLDNVHVGII 420
               +QFR D+YG D   + I+
Sbjct: 610 DAGKLQFRKDVYGRDATMISIL 631


>gi|260582628|ref|ZP_05850417.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae NT127]
 gi|260094300|gb|EEW78199.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae NT127]
          Length = 489

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 129/241 (53%), Gaps = 7/241 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 353

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIY  
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYDY 470

Query: 413 D 413
           D
Sbjct: 471 D 471


>gi|260563978|ref|ZP_05834464.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
 gi|265991052|ref|ZP_06103609.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|260153994|gb|EEW89086.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
 gi|263001836|gb|EEZ14411.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 538

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 142/286 (49%), Gaps = 14/286 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 245 YDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 303

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 304 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 363

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 364 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 422

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +       ++ 
Sbjct: 423 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS-------VKN 475

Query: 371 VVK--TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + K   +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 476 LDKYFGKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 521


>gi|17987297|ref|NP_539931.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
 gi|256044628|ref|ZP_05447532.1| cell wall degradation protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|17982976|gb|AAL52195.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
          Length = 531

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 142/286 (49%), Gaps = 14/286 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 238 YDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 296

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 297 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 356

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 357 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 415

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +       ++ 
Sbjct: 416 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS-------VKN 468

Query: 371 VVK--TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + K   +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 469 LDKYFGKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 514


>gi|307318578|ref|ZP_07598012.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306895918|gb|EFN26670.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
          Length = 631

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 15/277 (5%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           V+ FQ  +GL   G+V  +++ A+        +I ++++  M   + L   +G RYV +N
Sbjct: 347 VEAFQKEYGLKADGIVGQASIRALTGGDTTQGKIDKVEI-AMEQARWLPDGLGDRYVFIN 405

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
            PA +    E G       V+VG    QT      I  +  NPYW +P+SII  +M+  L
Sbjct: 406 QPAFTASYTEQGTEQFSMRVVVGSKANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKL 465

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           R DP YL D   + ++  G+ V    V+W      +   RQ P   NA+   KI F + +
Sbjct: 466 RNDPGYL-DRMGYQVEVGGRVVPSTAVNWYG-STNSIAVRQPPSSDNALGELKILFPNAH 523

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV---VKTRK 376
             YMHDTP    F    R  + GCVR+ +   +   +L          ++EV   +   +
Sbjct: 524 AIYMHDTPSKSFFKRDQRALSHGCVRLADPRRMAAAVLG-------VSVDEVGMEISGGR 576

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              + ++ +VPV+  Y +AW  KD  +++ DD+Y  D
Sbjct: 577 NKALPVSAKVPVYVAYFTAWPNKDGTVEYFDDVYERD 613


>gi|256113506|ref|ZP_05454340.1| cell wall degradation protein [Brucella melitensis bv. 3 str.
           Ether]
          Length = 531

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 142/286 (49%), Gaps = 14/286 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 238 YDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 296

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 297 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 356

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 357 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 415

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +       ++ 
Sbjct: 416 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS-------VKN 468

Query: 371 VVK--TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + K   +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 469 LDKYFGKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 514


>gi|113461215|ref|YP_719284.1| hypothetical protein HS_1072 [Haemophilus somnus 129PT]
 gi|112823258|gb|ABI25347.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 475

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 134/245 (54%), Gaps = 9/245 (3%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L +N  R++ + +   G   + VNIP+  L    +GK+ L S VIVG+  R+TP+++
Sbjct: 222 LYKLAINAQRLRIIPDFNNG---IFVNIPSYQLNYYRDGKLVLNSKVIVGKKARKTPVMY 278

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           S+++ I+ NP W+    +I +D++  ++ DP Y+  N+  + D KG+ +    +DWN+  
Sbjct: 279 SKLSNIVVNPPWIPTPRLINEDIVPKIKLDPDYVARNSYTISDSKGQVIDPSSIDWNTI- 337

Query: 293 PPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
             NF +  RQ PG  +A+ + K    S +  Y+HDTP   LF+   R  +SGCVRV    
Sbjct: 338 GTNFPYRIRQAPGG-SALGNYKFNMPSSDAIYLHDTPNRGLFSKKNRALSSGCVRVEKSD 396

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
            L   LL +   W+    + V+ ++K T   + ++ PV+  Y++ W   D +++   DIY
Sbjct: 397 QLATILLTEA-GWTEERKQNVLNSKKNTSENIRSDNPVYLYYVTTWVEND-VVKTLPDIY 454

Query: 411 GLDNV 415
             D V
Sbjct: 455 EYDQV 459


>gi|306843862|ref|ZP_07476457.1| cell wall degradation protein [Brucella sp. BO1]
 gi|306275617|gb|EFM57341.1| cell wall degradation protein [Brucella sp. BO1]
          Length = 681

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 138/280 (49%), Gaps = 12/280 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 373 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 431

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 432 KRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 491

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 492 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 550

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 551 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 608

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
                +    +K+   VPV+  Y +AW   D  I +  DI
Sbjct: 609 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDI 644


>gi|300022605|ref|YP_003755216.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524426|gb|ADJ22895.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 597

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 144/315 (45%), Gaps = 16/315 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   + S  V  L++R  ++     ++G    FDA + +AVK FQ   GL   G V  +T
Sbjct: 213 LQSKSKSPEVATLKKRFGVAS----AQGEETVFDAALVAAVKTFQASAGLRADGFVGPAT 268

Query: 162 LEAM--NVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             A+    P +   RI  +  N M   + + Q++G   V VNIPA S+   ++G      
Sbjct: 269 RAALAGGGPENNADRIAAVIAN-MEEWRWMPQELGATNVFVNIPAFSIRLTKDGAPVFED 327

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V+VG  D+QTPI    +  I+  P W +P SI    + ALL        +   +++   
Sbjct: 328 RVVVGTADKQTPIFSKSMKTIVLRPEWNLPDSI---KLTALLSGRS---VEQQGYVVMRN 381

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           G+ +    V+W       +   Q  G  NA+   K  F +++  Y+HDTP   LFN  VR
Sbjct: 382 GRTIDSTRVNWAKANLREYTIFQPSGDDNALGLVKFLFPNKHAVYLHDTPSRHLFNERVR 441

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV-KTRKTTPVKLATEVPVHFVYISAW 396
             + GCVRVRN       LL      + + ++ +V K  K   V L T +PVH  Y + W
Sbjct: 442 LYSHGCVRVRNPQVFAQDLLDIDRGAAAFDVKRLVRKGPKDNNVTLETPIPVHVGYFTVW 501

Query: 397 SPKDSIIQFRDDIYG 411
              D   Q+  D YG
Sbjct: 502 VGDDGQPQYFKDYYG 516


>gi|188582120|ref|YP_001925565.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179345618|gb|ACB81030.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 662

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 159/342 (46%), Gaps = 44/342 (12%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLII----SGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P+ P+  L LG S   V  LR R  +    +G LD + G + A+D  V  AVK FQ   G
Sbjct: 292 PDGPV--LKLGMSDPRVPLLRSRFGLEKQAAGTLDAAPGEADAYDGAVADAVKSFQRSRG 349

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNL---MRIKKLLEQKMGLRYVLVNIPAASLEA 207
           L  SG +  +T+ A+  P   +    + +L   M   + L  ++G  YV VN+P   L+ 
Sbjct: 350 LPASGTLTRATVAALANPSVPKTAASEADLLVNMERWRWLPAELGPDYVFVNVPEFKLKV 409

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
             +G +   + VIVG+    TPI    +   + NP W +P SI+ K M+A  R       
Sbjct: 410 FRDGHLRDETRVIVGKPTSPTPIFSGMMEYAVVNPSWYVPPSIL-KQMLASGR------- 461

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
                 +  +GK +                 RQ PG+ NA+   K  F ++++ Y+HDTP
Sbjct: 462 -TAGFEVVRRGKTI---------------SLRQPPGERNALGFIKFMFPNQHSVYLHDTP 505

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
              LF+   R  + GCVRV +       +L   PTW+   +++++   + T ++L  ++P
Sbjct: 506 NRSLFSASTRAFSHGCVRVDDPFRFADAVL---PTWTEERLKKLIGKGERT-LRLPEKLP 561

Query: 388 VHFVYISAWSPKDSIIQFR--DDIYGLDN---VHVGIIPLPE 424
           VH  Y +A    D +  +R   D+YG D      +G+ P  E
Sbjct: 562 VHLAYFTAEV--DDLGSYRTLTDLYGYDGPMKAALGLAPRSE 601


>gi|308050064|ref|YP_003913630.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
 gi|307632254|gb|ADN76556.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
          Length = 459

 Score =  124 bits (310), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 15/323 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLII--SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P++ L LG S   + +LR  L I     L P+      +D    + +K +Q  +GL  +G
Sbjct: 139 PLQSLGLGQSHPDLAQLRRALAIRLGEALPPTLQDRPVWDPPFTALLKQYQDSNGLSATG 198

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
            +DS+T   +      RI  +Q +L +  +L ++  G   +LVNIP   L  + +  V L
Sbjct: 199 RLDSATRRHLGSVGQDRIAAIQYSLRQWYQLPDRIEGY-AMLVNIPRYELLVLNDEAVEL 257

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
              VIVG     TP ++S  + +  NP W  P SI++ +++   RQDP  L       + 
Sbjct: 258 AVPVIVGSPANPTPKMNSYFSSVTLNPSWTPPMSIVRNELLPGYRQDPTTLHRQGFEWVG 317

Query: 276 EKGKEVFVEEVDWNSPEPPN-------FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
            KG+      + W    P N       +  RQ PG+ N +   +         Y+HDT  
Sbjct: 318 -KGQS----RLPWTQVTPENVNNVLGRYQLRQKPGRNNPLGKVRFNLAQSRAIYLHDTNN 372

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
           P LF    R  + GCVRV     +  +LL +  +  +  + + ++   +   ++ + V V
Sbjct: 373 PRLFRQSQRALSHGCVRVAEYQRVLDYLLANESSGRQRQVAQALQQHDSVTARVGSRVAV 432

Query: 389 HFVYISAWSPKDSIIQFRDDIYG 411
           + VY+ AW   D+ +   DD+YG
Sbjct: 433 YLVYMPAWVGPDNRLHLVDDVYG 455


>gi|307946894|ref|ZP_07662229.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
 gi|307770558|gb|EFO29784.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
          Length = 681

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 136/275 (49%), Gaps = 8/275 (2%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDL-RIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           VK FQ  + L   G+V  +T+ AM    +  +I ++++ + R ++ L  ++G R V +N 
Sbjct: 393 VKGFQKENKLAADGIVGKNTIRAMVGETNAAKIAKIELAMER-RRWLPDELGERRVFINQ 451

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PA +    E   + L   V+VG+   QT   +  +  + +NPYW +P SII  +M+  L 
Sbjct: 452 PAFTATFYEGSSLPLSMRVVVGKKSNQTNFFYDNVEIVEYNPYWGVPYSIIVNEMIPKLA 511

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSR 318
            +P YL      +    G++V    V+W   +    +   RQ PG  NA+   KI F ++
Sbjct: 512 ANPYYLDQAGYEVTTPSGRKVSSANVNWYAVASRQQSINVRQYPGAKNALGVVKILFPNK 571

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           ++ YMHDTP   LFN   R  + GCVR+ +   +   +L      S+ ++ + +   K  
Sbjct: 572 HHIYMHDTPAKSLFNKDTRAYSHGCVRLHDPKAMAAAVLGK----SKDYVSQQIAKGKNR 627

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             ++  ++PV+  Y +AW      +++  D+Y  D
Sbjct: 628 QERVEGDLPVYVSYFTAWPNDAGQVEYFADVYDRD 662


>gi|15965611|ref|NP_385964.1| hypothetical protein SMc00150 [Sinorhizobium meliloti 1021]
 gi|307302730|ref|ZP_07582486.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|15074792|emb|CAC46437.1| Putative membrane protein [Sinorhizobium meliloti 1021]
 gi|306903094|gb|EFN33685.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 631

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 15/277 (5%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           V+ FQ  +GL   G+V  +++ A+        +I ++++  M   + L   +G RYV +N
Sbjct: 347 VEAFQKEYGLKADGIVGQASIRALTGGDTTQGKIDKVEI-AMEQARWLPDGLGDRYVFIN 405

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
            PA +    E G       V+VG    QT      I  +  NPYW +P+SII  +M+  L
Sbjct: 406 QPAFTASYTEQGTEQFSMRVVVGSKANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKL 465

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           R DP YL D   + ++  G+ V    V+W      +   RQ P   NA+   KI F + +
Sbjct: 466 RNDPGYL-DRMGYQVEVGGRVVPSTAVNWYG-STNSIAVRQPPSSDNALGELKILFPNAH 523

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV---VKTRK 376
             YMHDTP    F    R  + GCVR+ +   +   +L          ++EV   +   +
Sbjct: 524 AIYMHDTPSKSFFKRDQRALSHGCVRLADPRRMAAAVLG-------VSVDEVGMEISGGR 576

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              + ++ +VPV+  Y +AW  KD  +++ DD+Y  D
Sbjct: 577 NKALPVSAKVPVYVSYFTAWPNKDGTVEYFDDVYERD 613


>gi|225852468|ref|YP_002732701.1| peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
 gi|225640833|gb|ACO00747.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
          Length = 510

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 12/285 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA++ +Q   G    G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 217 YDPELVSAIQDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 275

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 276 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 335

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 336 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 394

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-PTWSRYHIE 369
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     +Y   
Sbjct: 395 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLDKYF-- 452

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 453 ----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 493


>gi|332186707|ref|ZP_08388450.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
 gi|332013359|gb|EGI55421.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
          Length = 476

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 140/297 (47%), Gaps = 26/297 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L+I   L P       +   +  AV+  Q  +G+ P G++ +  L  +N+    R R + 
Sbjct: 181 LVILDYLTPDAAQGDRYTPAIGDAVRRMQADYGMKPDGIIGNEALAILNMSDADRARAIA 240

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           V + R++  LE+      + VNI AA L    +GK+     V+VG  D +TP L S I R
Sbjct: 241 VAMERLR-WLERTPPATRIDVNIAAARLSYWRDGKIVDSRRVVVGEPDTETPQLGSPIFR 299

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
           ++ NP W +PRSI +K+   L ++   YL+ NN+ + D                    +I
Sbjct: 300 LVANPTWTVPRSIQKKE---LAQKGAGYLRANNMELKD-------------------GWI 337

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            +Q PG  N++   K +  + +  Y+HDTP   LF  V R  + GCVRV + +     L 
Sbjct: 338 VQQ-PGPKNSLGLAKFDMQNDHAIYLHDTPAKPLFAMVQRQRSHGCVRVEDALGFAEMLA 396

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           KD      +H     +T K T VKL  ++PV  +Y +    KD     R+D YG D+
Sbjct: 397 KDEGVVDEWH--RARETGKETFVKLPRQIPVRLLYQTVLFDKDGEPIVRNDPYGWDD 451


>gi|326408985|gb|ADZ66050.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M28]
 gi|326538698|gb|ADZ86913.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M5-90]
          Length = 531

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 142/286 (49%), Gaps = 14/286 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA++ +Q   G    G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 238 YDPELVSAIQDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 296

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 297 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 356

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 357 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 415

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +       ++ 
Sbjct: 416 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS-------VKN 468

Query: 371 VVK--TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + K   +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 469 LDKYFGKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 514


>gi|265999484|ref|ZP_05466569.2| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
 gi|263094225|gb|EEZ18102.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
          Length = 538

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 142/286 (49%), Gaps = 14/286 (4%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA++ +Q   G    G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 245 YDPELVSAIQDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 303

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +PRSII 
Sbjct: 304 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPRSIIL 363

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
            +M+  + +D  YL D N + +   GK+V    V+W+  +    +   RQ P   N++  
Sbjct: 364 NEMLPKVMRDTSYL-DRNGYEVYANGKKVSASAVNWSAVATGKAHIGIRQKPSLDNSLGE 422

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +       ++ 
Sbjct: 423 LKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS-------VKN 475

Query: 371 VVK--TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + K   +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 476 LDKYFGKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 521


>gi|170741335|ref|YP_001769990.1| peptidoglycan binding domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168195609|gb|ACA17556.1| Peptidoglycan-binding domain 1 protein [Methylobacterium sp. 4-46]
          Length = 654

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 19/274 (6%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A++ FQ   GL  +G++D  T+ A+  P   R     +  M   + L  ++G +YV VN
Sbjct: 300 GAIERFQRERGLAATGILDPRTVAALAGPSPGRQEADLLANMERWRWLPAELGRKYVWVN 359

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP   +  +E G+V   + VIVG+ D  TPI    ++  + NP W +P SI++ + +  L
Sbjct: 360 IPDLKVRVMEGGRVVDEARVIVGKPDSPTPIFSGEMSYAVVNPSWNVPPSILKNEFLPRL 419

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
            +DP Y       ++  KG  + V               RQ PG+ NA+   K  F + +
Sbjct: 420 ARDPSYAARLGYQVV-RKGNSIAV---------------RQPPGERNALGFIKFMFPNEH 463

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             Y+HDTP   LF    R  + GCVRV +       +L   PTW    +++++   + T 
Sbjct: 464 AVYLHDTPNRTLFARGARALSHGCVRVDDPFRFAEVVL--GPTWPTERLKKLIGKGERT- 520

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           V L  ++PVH  Y +  + +   ++  +D+YG++
Sbjct: 521 VMLPEKLPVHLAYFTLVADEAGGLREAEDLYGIN 554


>gi|92116782|ref|YP_576511.1| peptidoglycan binding domain-containing protein [Nitrobacter
           hamburgensis X14]
 gi|91799676|gb|ABE62051.1| Peptidoglycan-binding domain 1 [Nitrobacter hamburgensis X14]
          Length = 775

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 155/322 (48%), Gaps = 28/322 (8%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-V 169
           V ++R +L ++ + D        FDA V +AV+ FQ R+ L P G+  ++T+ A+N P  
Sbjct: 405 VPQIRAKLGVTQNPD-----DAHFDADVAAAVREFQTRNHLQPDGIAGNNTIRALNGPRK 459

Query: 170 DLRIRQLQVNLMR----IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
             +I  + VN+ R     ++L    +G  Y ++NIP  +L+ +++G     + V+VG+  
Sbjct: 460 GHQIDTIIVNMERWRWLPRELGAPSLGNAYAILNIPDYTLKVMQHGAQLWSTRVVVGKPG 519

Query: 226 -RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
              TP+L   +  I  NP W +P SII K+ +  L+QDP  L+   + +  ++   + + 
Sbjct: 520 IHATPLLTETMKYITVNPTWNVPPSIIYKEYLPALQQDPTVLERMGLKLERDRNGGIHIS 579

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                          Q PG  NA+   +  F ++   Y HDTP+  LF    R  + GC+
Sbjct: 580 ---------------QPPGDRNALGRIRFNFPNKFLVYQHDTPDKYLFAKEKRAFSHGCM 624

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           RV+N       LL        Y  E++  +  RK   +K  T +PV+  Y +A+      
Sbjct: 625 RVQNPDQYAATLLNIALPQEHYTPEKIRGMYGRKEFDIKFPTPIPVNITYQTAFVDHAGK 684

Query: 403 IQFRDDIYGLDNVHVGIIPLPE 424
           +Q R D+YG D   + ++  P+
Sbjct: 685 LQIRPDVYGSDAKMLALLRNPK 706


>gi|299132062|ref|ZP_07025257.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
 gi|298592199|gb|EFI52399.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
          Length = 710

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 147/302 (48%), Gaps = 37/302 (12%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV-DLRIRQLQVNLMR----IKKLLE 188
           +DA V +AV+ FQ  + L  +G++D+ T+ A+N P  D +I  ++VN+ R     + L  
Sbjct: 365 YDATVAAAVRKFQSANDLKATGVLDNHTVAALNGPRNDRKIDIIRVNMERWRWLPRDLGA 424

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ-TPILHSRINRIMFNPYWVIP 247
             +G  YV++NIP  SL+ + NG    ++ V+VG+  +  TP+L   +  I  NP W +P
Sbjct: 425 PALGDAYVILNIPDYSLQLMHNGATAWKTRVVVGKPGKHATPLLTETMKYITVNPTWNVP 484

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SII  + +  L+QDP  L+   + +       + +                Q PG+ NA
Sbjct: 485 PSIIYNEYLPALQQDPTVLERMGLKLQRNPDGTIRIS---------------QPPGEANA 529

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN-----IIDLDVWLLKD--T 360
           +   +  F ++   Y HDTP+  LF    R  + GC+RV+N        L + L KD  T
Sbjct: 530 LGRIRFNFPNKFLVYQHDTPDKYLFAKSERAFSHGCMRVQNPDQYAATILGIALPKDHYT 589

Query: 361 PTWSR--YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           P   R  Y   E+        + L T +PV+  Y +A+      ++FR DIYG D   + 
Sbjct: 590 PEKIRSMYGHNEIN-------INLPTPLPVNITYQTAFVDDAGKLEFRKDIYGRDATMIK 642

Query: 419 II 420
           ++
Sbjct: 643 LL 644


>gi|227822250|ref|YP_002826221.1| peptidoglycan binding protein, putative [Sinorhizobium fredii
           NGR234]
 gi|227341250|gb|ACP25468.1| peptidoglycan binding protein, putative [Sinorhizobium fredii
           NGR234]
          Length = 630

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 9/276 (3%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           S V+ FQ  HGL   G+V  +++  +        +I +L++  M   + L   +G RYV 
Sbjct: 343 SLVEAFQKEHGLKADGVVGQASIRVLTGGDTTASKIDKLEI-AMEQARWLPNDLGNRYVF 401

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           +N PA      ++G       V+VG    QT   H  I  +  NPYW +P+SII  +M+ 
Sbjct: 402 INQPAFMAYYTDHGAEQFSMRVVVGSKANQTYFFHDEIQTVEVNPYWGVPQSIIVNEMLP 461

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
            LR DP YL D   + ++  G+ V    VDW      +   RQ P   NA+   KI F +
Sbjct: 462 KLRSDPSYL-DRMGYQVEVGGRVVPSYAVDWYG-STNSVAVRQPPSSDNALGELKILFPN 519

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
            +  YMHDTP    F    R  + GCVR+     +   +L      S   +   +   + 
Sbjct: 520 SHAIYMHDTPSKSFFKRDQRALSHGCVRLAEPRRMAAAVL----GVSMDDVGNEIAQGRN 575

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             + +  +VPV+  Y +AW  KD  +++ +D+Y  D
Sbjct: 576 RALPVPQKVPVYVSYFTAWPNKDGKVEYFNDVYERD 611


>gi|332188328|ref|ZP_08390054.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
 gi|332011641|gb|EGI53720.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
          Length = 428

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 152/333 (45%), Gaps = 31/333 (9%)

Query: 95  PELPI----RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P  PI    +P+  G S   +  +  +L+    LD +   +V +   + +AVK  Q  +G
Sbjct: 107 PPTPIPDAGKPIEPGKSDPRIPAIAAQLVAFDYLDKAAAGAV-YTPPMVAAVKRMQADYG 165

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +DP GM+ +  LE +N+    R R + VN+ R++  LE+      + VN+ AA L    +
Sbjct: 166 IDPDGMIGTDALEILNLSDADRARAIAVNMERLR-WLERNPPATRIDVNLAAARLAYWRD 224

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           GK+     V+VG  +  TP L S I R++ NP W +PRSI +K++     +   YL+ NN
Sbjct: 225 GKLVDTRKVVVGEPETATPQLGSPILRLVANPTWTVPRSIQRKELAG---KGAGYLRRNN 281

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
           +   D                    +I +Q PG  NA+   K +  +  + Y+HDTP   
Sbjct: 282 MVWKD-------------------GWIVQQ-PGPKNALGLVKFDMQNEQSIYLHDTPAKA 321

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LF+ V R  + GCVRV + +     L +D    + +H      T K + V L   VPV  
Sbjct: 322 LFSEVQRQRSHGCVRVEDALGFAEMLARDQGVDAEWH--RARATGKESYVALPQPVPVRM 379

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           +Y +           R D YG ++     +  P
Sbjct: 380 LYQTVLFDDSGEPVVRSDPYGWNDRVASALGFP 412


>gi|170717815|ref|YP_001784877.1| hypothetical protein HSM_1557 [Haemophilus somnus 2336]
 gi|168825944|gb|ACA31315.1| conserved hypothetical protein [Haemophilus somnus 2336]
          Length = 475

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 134/245 (54%), Gaps = 9/245 (3%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L +N  R++ + +   G   + VNIP+  L    +G++ L S VIVG+  R+TP+++
Sbjct: 222 LYKLAINAQRLRIIPDFNNG---IFVNIPSYQLNYYRDGELVLNSKVIVGKKARKTPVMY 278

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           S+++ I+ NP W+    +I +D++  ++ DP Y+  N+  + D KG+ +    ++WN+  
Sbjct: 279 SKLSNIVVNPPWIPTPRLINEDIVPKIKLDPDYVARNSYTISDSKGQVIDPSSINWNTI- 337

Query: 293 PPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
             NF +  RQ PG  +A+ + K    S +  Y+HDTP   LF+   R  +SGCVRV    
Sbjct: 338 GTNFPYRIRQAPGG-SALGNYKFNMPSSDAIYLHDTPNRGLFSKKNRALSSGCVRVEKSD 396

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
            L   LL +   W+    + V+ ++K T   + ++ PV+  Y++ W   D +++   DIY
Sbjct: 397 QLATILLTEA-GWTEERKQNVLNSKKNTSENIRSDNPVYLYYVTTWVEND-VVKTLPDIY 454

Query: 411 GLDNV 415
             D V
Sbjct: 455 EYDQV 459


>gi|192293029|ref|YP_001993634.1| peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192286778|gb|ACF03159.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 724

 Score =  121 bits (303), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 150/318 (47%), Gaps = 28/318 (8%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV- 169
           V +LR RL ++ + D     S  +DA V +AV+ FQ    L  SG++D  T++A+N P  
Sbjct: 354 VPQLRARLGVTENPD-----STTYDATVAAAVRKFQDHADLKASGVLDERTVKALNTPKR 408

Query: 170 DLRIRQLQVNLMR----IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           D  I  + VN+ R     + L    +G  YV++NIP  +L+ +++G     + V+ G+  
Sbjct: 409 DRTIDTIIVNMERWRWLPRDLGAPSLGDAYVILNIPDYTLKVMQHGAEVWTTRVVTGKPG 468

Query: 226 RQ-TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           +  TP+L   +  I  NP W +P SII  + +  L+QDP  L    + +   +   + + 
Sbjct: 469 KHATPLLTETMKYITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRDGSIHIS 528

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                          Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+
Sbjct: 529 ---------------QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAREERAFSHGCM 573

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           RV+N       LL        Y   +V  +  R    +K  T +PV+  Y +A+      
Sbjct: 574 RVQNPDVYASTLLNIAMPEKDYTPAKVRAMYGRSEVDLKFPTPIPVNITYQTAFVDDAGK 633

Query: 403 IQFRDDIYGLDNVHVGII 420
           +Q R D+YG D   +G++
Sbjct: 634 LQLRKDVYGRDAAMLGLL 651


>gi|300024880|ref|YP_003757491.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526701|gb|ADJ25170.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 557

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 124/239 (51%), Gaps = 2/239 (0%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L+ N M + + +   MG  YVL NIP       ++G++   + ++ G VD+++ I   
Sbjct: 252 KRLRAN-MEMWRWMWPDMGDFYVLNNIPEFMQYVYKDGEIIRSAKIVAGEVDKKSTIFSR 310

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            +  ++  P W +P SI+  ++   L +    ++   + +  + G+ V   + DW+S + 
Sbjct: 311 PLKYVVLRPAWRVPESIMVNELWPSLIRGGGLMRQYGLQLQTKDGRRVDWRQYDWSSTDI 370

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
            NFI  Q PG  + +   K  F S++  +MHDTP+  +F    R  + GC+RV+N + L 
Sbjct: 371 RNFIVLQPPGPKSVLGRVKFSFPSQHTIFMHDTPDKWMFRPAQRTLSHGCLRVQNPMQLA 430

Query: 354 VWLLKDTPTWSRYHIEEVVKTRK-TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
             +LK+   W    I E+ ++      V ++ E+P+H VY +AW   D  ++  +D+YG
Sbjct: 431 EMVLKEDKGWDAAKIAELDRSGPLNNEVPISKEIPIHLVYFTAWVTDDGKLKTFNDVYG 489


>gi|27382242|ref|NP_773771.1| hypothetical protein blr7131 [Bradyrhizobium japonicum USDA 110]
 gi|27355413|dbj|BAC52396.1| blr7131 [Bradyrhizobium japonicum USDA 110]
          Length = 735

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 153/318 (48%), Gaps = 28/318 (8%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV- 169
           V +LR +L I+ +   ++     +DA V  AV+ FQ    +  +G++D  T++A+N P  
Sbjct: 367 VPQLRAKLGITENASDTR-----YDAAVAEAVRKFQNGAEIKATGILDDKTVKALNTPKR 421

Query: 170 DLRIRQLQVNLMRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           D +I  + VN+ R + L        +G  YV++NIP  +L+ ++ G+    + V+ G+  
Sbjct: 422 DKQIDTVLVNMERWRWLPRDLGVPSLGDAYVILNIPDYTLKVMQRGQPVWTTRVVTGKPG 481

Query: 226 RQ-TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           +  TP+L   +  I  NP W +P SI+  + +  L+QDP  L+   + +   +   V + 
Sbjct: 482 QHATPLLTETMKYITVNPTWNVPPSIVYNEYLPALQQDPTVLQRMGLKLEQNRDGSVHIS 541

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                          Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+
Sbjct: 542 ---------------QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAKEDRAFSHGCM 586

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           RV+N       LL       +Y  E V  +  +    +K  T +PV+  Y +A+      
Sbjct: 587 RVQNPDQYASVLLNIAMPNEKYTPERVRSMYGKSEIDLKFPTPIPVNITYQTAFVDDAGK 646

Query: 403 IQFRDDIYGLDNVHVGII 420
           +QFR D+YG D+  + I+
Sbjct: 647 LQFRKDVYGRDSTMINIL 664


>gi|316935702|ref|YP_004110684.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603416|gb|ADU45951.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 743

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 152/318 (47%), Gaps = 28/318 (8%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV- 169
           V +LR RL ++ + D     S  +DA V +AV+ FQ    L  +G++D  T++A+N P  
Sbjct: 373 VPQLRARLGVTENTD-----SATYDAAVAAAVRKFQHSADLKATGVLDDRTVKALNTPKR 427

Query: 170 DLRIRQLQVNLMRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           D  I  + VN+ R + L  Q     +   YV++N+P  +L+ ++NG+    + V+VG+  
Sbjct: 428 DRTIDTILVNMERWRWLPRQLGAPALDDAYVILNVPDYTLKLMQNGEQVWSTRVVVGKPG 487

Query: 226 RQ-TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           +  TP+L   +  I  NP W +P SII  + +  L+QDP  L    + +   +   + + 
Sbjct: 488 KHATPLLTETMKYITVNPTWNVPPSIINNEYLPALQQDPTVLDRMGLKLSRNRDGSIHIS 547

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                          Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+
Sbjct: 548 ---------------QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFGRDERAFSHGCM 592

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           RV+N       LL        Y    +  +  R    +K AT +PV+  Y +A+   D  
Sbjct: 593 RVQNPDQYAAALLNIAMPDKNYTPARIRSMYGRSEVDLKFATPIPVNITYQTAFVDDDGK 652

Query: 403 IQFRDDIYGLDNVHVGII 420
           +Q R DIYG D   + ++
Sbjct: 653 LQLRKDIYGRDAAMLALL 670


>gi|163852171|ref|YP_001640214.1| peptidoglycan binding domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163663776|gb|ABY31143.1| Peptidoglycan-binding domain 1 protein [Methylobacterium extorquens
           PA1]
          Length = 646

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 155/330 (46%), Gaps = 43/330 (13%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLII----SGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P+ P+  L LG S   V  LR R  +    +G LD + G + A+D  V  AVK FQ   G
Sbjct: 275 PDGPV--LKLGMSDPRVPLLRSRFGLDASAAGTLDSAPGEADAYDRSVADAVKNFQRSRG 332

Query: 151 LDPSGMVDSSTLEAM---NVP-VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           L  +G +  +T+ A+   +VP        + VN+ R +  L  ++G  YV VN+P   L+
Sbjct: 333 LPANGTLTRATVAALVNSSVPKTSASEADILVNMERWR-WLPPELGPNYVFVNVPEFKLK 391

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
              +G+V   + VIVG+    TP     +   + NP W +P SI+ K M+A         
Sbjct: 392 VFRDGQVRDETRVIVGKPTSPTPTFSGMMEYAVVNPSWYVPPSIL-KQMLA--------- 441

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
                      G+    E V        N   RQ PG+ NA+   K  F +++  Y+HDT
Sbjct: 442 ----------SGRTAGFEVVRRGG----NISLRQPPGERNALGFIKFMFPNQHAVYLHDT 487

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LF+   R  + GCVRV +       +L   PTW++  +++++   + T ++L  ++
Sbjct: 488 PNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PTWTQERLKKLIGKGERT-LRLPEKL 543

Query: 387 PVHFVYISAWSPKDSIIQFRD--DIYGLDN 414
           PVH  Y +A    D +  +R   D+YG D 
Sbjct: 544 PVHLAYFTAEV--DDLGSYRTLPDLYGYDG 571


>gi|288959756|ref|YP_003450096.1| hypothetical protein AZL_a00210 [Azospirillum sp. B510]
 gi|288912064|dbj|BAI73552.1| hypothetical protein AZL_a00210 [Azospirillum sp. B510]
          Length = 545

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 147/304 (48%), Gaps = 12/304 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V +L  RLI  G L P+   + +F+  VE+AV+ FQ   GL P G V   T +A++    
Sbjct: 172 VGKLSRRLIELGLL-PADKWTDSFNDDVEAAVRAFQTTEGLQPDGKVGEVTRQALDR-TP 229

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            +   L        +  +  +    +LVN+P  S+  +E+G+       +VGR  R+TP+
Sbjct: 230 AQTVALLRRAAAAMRAQQASIPDTSILVNLPGQSVTLIEHGRPTFTMRAVVGRPSRKTPL 289

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWN 289
           L  ++  +  NP W +P +++ +D +  LR+       N +  +D  G EV   + V+W 
Sbjct: 290 LQDKVTSVTINPTWTVPPTVLSEDKLPALRKKGTTGIKNAVVYLD--GAEVASTQSVNWW 347

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
           S +P      Q PG  NA+   +    + +  ++H T +P LF+  +R  +SGCVR+ + 
Sbjct: 348 SVDPGRVRIVQKPGDDNALGRFRFNLTNGDGIFLHGTNDPRLFSRDLRAASSGCVRLEDA 407

Query: 350 IDLDVWLL---KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
             +   LL   K TP      I + + T  T  ++L   +PV FVY +A      +++  
Sbjct: 408 RLMAETLLGAAKVTP----AGIGQQLDTGDTKTIRLPVAIPVRFVYWNASVDTAGVVRVH 463

Query: 407 DDIY 410
            DIY
Sbjct: 464 PDIY 467


>gi|39937248|ref|NP_949524.1| hypothetical protein RPA4188 [Rhodopseudomonas palustris CGA009]
 gi|39651106|emb|CAE29629.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 724

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 149/318 (46%), Gaps = 28/318 (8%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV- 169
           V +LR RL ++ + D     S  +DA V +AV+ FQ    L  SG++D  T++A+N P  
Sbjct: 354 VPQLRARLGVTENPD-----STTYDATVAAAVRKFQDHADLKASGVLDERTVKALNTPKR 408

Query: 170 DLRIRQLQVNLMR----IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           D  I  + VN+ R     + L    +G  YV++NIP  +L+ +++G     + V+ G+  
Sbjct: 409 DRTIDTIIVNMERWRWLPRDLGAPSLGDAYVILNIPDYTLKVMQHGAEVWTTRVVTGKPG 468

Query: 226 RQ-TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           +  TP+L   +  I  NP W +P SII  + +  L+QDP  L    + +   +   + + 
Sbjct: 469 KHATPLLTETMKYITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRDGSIHIS 528

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                          Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+
Sbjct: 529 ---------------QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAREERAFSHGCM 573

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           RV+N       LL        Y   +V  +  R    +K  T +PV+  Y +A+      
Sbjct: 574 RVQNPDVYASTLLNIAMPEKDYTPAKVRAMYGRSEVDLKFPTPIPVNITYQTAFVDDAGK 633

Query: 403 IQFRDDIYGLDNVHVGII 420
           +Q R D+YG D   + ++
Sbjct: 634 LQLRKDVYGRDAAMLALL 651


>gi|218530929|ref|YP_002421745.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218523232|gb|ACK83817.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 648

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 155/330 (46%), Gaps = 43/330 (13%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLII----SGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P+ P+  L LG S   V  LR R  +    +G LD + G + A+D  V  AVK FQ   G
Sbjct: 277 PDGPV--LKLGMSDPRVPLLRSRFGLDASAAGTLDSAPGEADAYDRAVADAVKNFQRSRG 334

Query: 151 LDPSGMVDSSTLEAM---NVP-VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           L  +G +  +T+ A+   +VP        + VN+ R +  L  ++G  YV VN+P   L+
Sbjct: 335 LPANGTLTRATVAALASSSVPKTSASEADILVNMERWR-WLPPELGPNYVFVNVPEFKLK 393

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
              +G+V   + VIVG+    TP     +   + NP W +P SI+ K M+A         
Sbjct: 394 VFRDGQVRDETRVIVGKPTSPTPTFSGMMEYAVVNPSWYVPPSIL-KQMLA--------- 443

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
                      G+    E V        N   RQ PG+ NA+   K  F +++  Y+HDT
Sbjct: 444 ----------SGRTAGFEVVRRGG----NISLRQPPGERNALGFIKFMFPNQHAVYLHDT 489

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LF+   R  + GCVRV +       +L   P+W++  +++++   + T ++L  ++
Sbjct: 490 PNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PSWTQERLKKLIGKGERT-LRLPEKL 545

Query: 387 PVHFVYISAWSPKDSIIQFRD--DIYGLDN 414
           PVH  Y +A    D +  +R   D+YG D 
Sbjct: 546 PVHLAYFTAEV--DDLGSYRTLPDLYGYDG 573


>gi|254561917|ref|YP_003069012.1| hypothetical protein METDI3518 [Methylobacterium extorquens DM4]
 gi|254269195|emb|CAX25161.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 646

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 155/330 (46%), Gaps = 43/330 (13%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLII----SGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P+ P+  L LG S   V  LR R  +    +G LD + G + A+D  V  AVK FQ   G
Sbjct: 275 PDGPV--LKLGMSDPRVPLLRSRFGLDASAAGTLDSAPGEADAYDRAVADAVKNFQRSRG 332

Query: 151 LDPSGMVDSSTLEAM---NVP-VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           L  +G +  +T+ A+   +VP        + VN+ R +  L  ++G  YV VN+P   L+
Sbjct: 333 LPANGTLTRATVAALASSSVPKTSASEADILVNMERWR-WLPPELGPNYVFVNVPEFKLK 391

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
              +G+V   + VIVG+    TP     +   + NP W +P SI+ K M+A         
Sbjct: 392 VFRDGQVRDETRVIVGKPTSPTPTFSGMMEYAVVNPSWYVPPSIL-KQMLA--------- 441

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
                      G+    E V        N   RQ PG+ NA+   K  F +++  Y+HDT
Sbjct: 442 ----------SGRTAGFEVVRRGG----NISLRQPPGERNALGFIKFMFPNQHAVYLHDT 487

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LF+   R  + GCVRV +       +L   P+W++  +++++   + T ++L  ++
Sbjct: 488 PNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PSWTQERLKKLIGKGERT-LRLPEKL 543

Query: 387 PVHFVYISAWSPKDSIIQFRD--DIYGLDN 414
           PVH  Y +A    D +  +R   D+YG D 
Sbjct: 544 PVHLAYFTAEV--DDLGSYRTLPDLYGYDG 571


>gi|254418463|ref|ZP_05032187.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
 gi|196184640|gb|EDX79616.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
          Length = 497

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 43/342 (12%)

Query: 85  YQDILSRGGWPELPIRPLHLGN------SSVSVQRLRERLIISGDLDPSKGLSVA----- 133
           Y+ I  RGGWP     P  LG       S   +  L  RL + GDL  +    V      
Sbjct: 160 YRAIADRGGWP-----PFALGATIEPFASDPRLPALLPRLRVEGDLTDAAAAMVGPSGGD 214

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           + + ++ AV++FQ+RHGL+    +  +T  A+++  + R RQ+ +NL R ++ L++ +  
Sbjct: 215 YGSVLQEAVRVFQVRHGLEADARIGPATQRALSISAEARARQIALNLER-RRWLKRDVAP 273

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             + VN  A+ +   ++G+      V+ G  D  TP L      ++ NP W +P SI Q+
Sbjct: 274 ERIEVNTAASIMVYWKDGRPVHSMRVVTGDADNATPSLERPFASVVANPPWTVPTSIAQR 333

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +   +L +   Y++ NN+ +                     N +  Q  G   A+   K 
Sbjct: 334 E---ILPRGAGYMRANNMTI--------------------QNGMVVQRAGPNAALGQVKF 370

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT-WSRYHIEEVV 372
           E       ++HDTP    F+   R  + GCVRV++ +     LL   P   +R+  +  +
Sbjct: 371 ELQDSYAIFLHDTPSRGAFDQSFRHLSHGCVRVQDAVGFARLLLAPDPERLARF--DAAL 428

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            + +T  V     + V  +Y +A+      + FRDDIY  D 
Sbjct: 429 DSGQTVRVATGRPIDVRLLYWTAFLDGQGRVAFRDDIYRRDT 470


>gi|240139503|ref|YP_002963978.1| hypothetical protein MexAM1_META1p2949 [Methylobacterium extorquens
           AM1]
 gi|240009475|gb|ACS40701.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 648

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 155/330 (46%), Gaps = 43/330 (13%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLII----SGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P+ P+  L LG S   V  LR R  +    +G LD + G + A+D  V  AVK FQ   G
Sbjct: 277 PDGPV--LKLGMSDPRVPLLRSRFGLDASAAGTLDSAPGEADAYDRAVADAVKNFQRSRG 334

Query: 151 LDPSGMVDSSTLEAM---NVP-VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           L  +G +  +T+ A+   +VP        + VN+ R +  L  ++G  YV VN+P   L+
Sbjct: 335 LPANGTLTRATVAALASSSVPKTSASEADILVNMERWR-WLPPELGPNYVFVNVPEFKLK 393

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
              +G++   + VIVG+    TP     +   + NP W +P SI+ K M+A         
Sbjct: 394 VFRDGQMRDETRVIVGKPTSPTPTFSGMMEYAVVNPSWYVPPSIL-KQMLA--------- 443

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
                      G+    E V        N   RQ PG+ NA+   K  F +++  Y+HDT
Sbjct: 444 ----------SGRTAGFEVVRRGG----NISLRQPPGERNALGFIKFMFPNQHAVYLHDT 489

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LF+   R  + GCVRV +       +L   P+W++  +++++   + T ++L  ++
Sbjct: 490 PNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PSWTQERLKKLIGKGERT-LRLPEKL 545

Query: 387 PVHFVYISAWSPKDSIIQFR--DDIYGLDN 414
           PVH  Y +A    D +  +R   D+YG D 
Sbjct: 546 PVHLAYFTAEV--DDLGSYRTLSDLYGYDG 573


>gi|42522877|ref|NP_968257.1| putative peptidoglycan-binding protein [Bdellovibrio bacteriovorus
           HD100]
 gi|39574073|emb|CAE79250.1| putative peptidoglycan-binding protein [Bdellovibrio bacteriovorus
           HD100]
          Length = 526

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 156/342 (45%), Gaps = 22/342 (6%)

Query: 88  ILSRGGWPEL--PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           +L  G W  +    +PL LG     + +L+ERL   G    S  ++  FD  +  A+   
Sbjct: 175 LLETGLWENITPAKKPLSLGKKDPVIIKLKERLRQLGYRIDS--MNDTFDQDMLIAINDI 232

Query: 146 QMRHGLDPSGMVD--SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
           Q+   + P G++     T    +V +  R+ QLQ ++ +++    Q +  R++ VN   +
Sbjct: 233 QLNLKMKPDGVISPGGRTWRFFSVSLLDRLSQLQADMEQLR-WFPQNLEDRHIFVNTAFS 291

Query: 204 SLEAVEN-GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
                +    + +    I G  +R+TP L  RI  ++ NP W IP ++   D + +L++ 
Sbjct: 292 HFMMTDKKNNISMSFKAINGTAERKTPTLRDRITYLVMNPTWTIPPTVFLNDKVEILKKL 351

Query: 263 P-----QYLKDNNIHMIDEK-GKEVFVEEVDWNSPEPP--NFIFRQDPGKINAMASTKIE 314
                 +Y  DN   +      + +    +DW S +    NF  RQ P   NA+   K  
Sbjct: 352 DTKGIRKYFTDNRFEVYTADFSRTIDPTSIDWKSIKSSSVNFYIRQKPSYNNALGVVKFM 411

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             +    Y+HDT +  LF    R  +SGCVR+   +DL  +LL  T  WSR  IE  V  
Sbjct: 412 MTNPYAIYLHDTNQRDLFGEAQRLRSSGCVRLEKPLDLAEYLLAGT-QWSRPQIENFVVK 470

Query: 375 R-----KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
                 K T V L   +PV+ V +++    D +I+F +D+YG
Sbjct: 471 EGQLVDKETRVDLKEPMPVYLVPVTSQMNSDGVIRFVEDVYG 512


>gi|116750212|ref|YP_846899.1| peptidoglycan binding domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116699276|gb|ABK18464.1| Peptidoglycan-binding domain 1 protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 587

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 154/351 (43%), Gaps = 43/351 (12%)

Query: 81  AIAFYQDILSRGGWPEL----PIRPLHLGNSSVSVQ-RLRERLIISGDLDPSKGLSVAFD 135
           A+A Y+D+ +     ++     +RP   GN+   +Q RLR+     G++      +  FD
Sbjct: 250 ALARYRDLAANTTQQQVRAPSTMRPGESGNAVRDLQKRLRQEDFYRGEI------TGTFD 303

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ--VNLMRIKKLLEQKMGL 193
           A  + AVK FQ  H ++P G V   T E +N+P   +   +   +NL+R  +    +   
Sbjct: 304 AATQQAVKRFQAAHQIEPDGAVGQRTREWLNMPFKQKAEMIAHGINLLRQSQT---RRSD 360

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRV-------------DRQTPILHSRINRIMF 240
           RYV +NIP  +LE  ++G+      VIVG+              + QTP L S I +++ 
Sbjct: 361 RYVRINIPQFALEYYKDGQSLSSHRVIVGKASGKKVKVLGKWMRENQTPTLTSNIEQVII 420

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +    I+ ++ A    DPQY   +        G         W  P     +F Q
Sbjct: 421 NPRWYV-SDRIRLELDAQAGSDPQYFARH--------GYVQMASLYPWGQPR----LF-Q 466

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N +   K EF +    Y+HDT +  LF    R  + GC+RV     L   LLKD 
Sbjct: 467 KPGPKNPLGQIKFEFPNPYAVYLHDTNQKSLFQRTRRDFSHGCIRVEKAKHLAHLLLKDD 526

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
                   E  + + +   +KLAT VP+   Y+     +D  + F  D YG
Sbjct: 527 QNPLADKTEPYLSSDRQLFIKLATPVPIIIEYLPVSCNEDGQVIFFGDPYG 577


>gi|182677142|ref|YP_001831288.1| peptidoglycan binding domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182633025|gb|ACB93799.1| Peptidoglycan-binding domain 1 protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 624

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 145/320 (45%), Gaps = 28/320 (8%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           PL +G     V  +R RL + G LD  +   G S  +D+ V  AV  FQ  +GL  SG++
Sbjct: 311 PLRVGMRDPRVALIRARLSLDGKLDKGQTENGASEIYDSEVSMAVADFQRANGLPASGVL 370

Query: 158 DSSTLEAMN------VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
              T   ++       P+   +    +  M   + +   +G   + VN+P   +  +E  
Sbjct: 371 TPQTSAILSGARLSATPLSPHVEHEILANMERWRWMPHDLGHDRIEVNLPDFEVAVIEKD 430

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +V  R  V++G+ +  TPI    +  ++ NPYW +P SI++K+M+  L  +P YL     
Sbjct: 431 EVVSRHRVVIGKEETPTPIFSHVMQFLIVNPYWNVPASILKKEMLPKLAANPNYL----- 485

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
           H +   G EVF  +         + + RQ PG+ NA+   K  F +    Y+HDTP    
Sbjct: 486 HRL---GYEVFKRDG--------HLVVRQPPGERNALGRIKFMFPNDYAVYLHDTPSKHY 534

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F    R  + GCVRV         +L   P WS   I+ +   ++   + L   +P+H  
Sbjct: 535 FEEDKRAFSHGCVRVDEPYHFAEAVL--GPKWSESRIKGLFGEKERY-ITLPKPLPIHLE 591

Query: 392 YISAWSPKDSIIQFRDDIYG 411
           Y +A   +   +   +D+YG
Sbjct: 592 YFTATVDRFGHLHLSEDVYG 611


>gi|327405461|ref|YP_004346299.1| ErfK/YbiS/YcfS/YnhG family protein [Fluviicola taffensis DSM 16823]
 gi|327320969|gb|AEA45461.1| ErfK/YbiS/YcfS/YnhG family protein [Fluviicola taffensis DSM 16823]
          Length = 535

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 150/324 (46%), Gaps = 11/324 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           P  + +S   V+  +E LI  G LDP K    +F      A+  FQ  +GL   G++   
Sbjct: 212 PALVEDSLRCVELSKESLIDKGYLDPKKNDDESF----WDAMSRFQADNGLKADGVIGIY 267

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T +++N  V  +  +  +++ R +         RY+ VNIP   L    N  +     V+
Sbjct: 268 TRKSLNESVRFKCHRAILSMERWR--WRAPFPDRYLWVNIPEYKLRLFYNDSLLSEHRVV 325

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG+ + QTP L S++  I+  PYW  P +I  K+ +  ++ +  Y   NN + +     E
Sbjct: 326 VGKPENQTPELSSKLRAIISLPYWTQPHTIASKEFLPAIQNNSNYAAKNN-YKVYRGETE 384

Query: 281 VFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           V    ++W   +  NF F  RQ+PG  NA+   K EF ++   Y+HDTP    FN  +R 
Sbjct: 385 VDPTTINWKRYKEKNFPFRVRQEPGSDNALGLVKFEFNNKFGVYIHDTPSKGFFNKDIRA 444

Query: 339 ETSGCVRVRNIIDLDVWLLK--DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
            + GC+R      L  ++L   D    +R  ++ ++  ++   + L   + +   YI+  
Sbjct: 445 YSHGCMRCELPDSLARFILTRDDRQKMTRDSLDTLIARKEHFTIHLHKPIQLQVDYITVT 504

Query: 397 SPKDSIIQFRDDIYGLDNVHVGII 420
           +     + F  D+Y  D  ++ ++
Sbjct: 505 TNGKGRLLFYPDVYDRDEKYLKMM 528


>gi|319957191|ref|YP_004168454.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
           16511]
 gi|319419595|gb|ADV46705.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
           16511]
          Length = 423

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 15/234 (6%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y LVNIP   +   ENG++   S V+VG+   QTPI  + +  ++ NP W +P +I + +
Sbjct: 185 YFLVNIPEFRVRFFENGRLAFVSDVVVGKKSWQTPIFSAAMKYVVLNPTWNVPDNIARAE 244

Query: 255 MMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPPNFIFR-------QDPGK 304
            +  L +DP Y K   + ++   D     V    V W     P +  +       Q P K
Sbjct: 245 EIPHLLRDPNYFKHKRMIVLRSYDLDTTPVNPRSVPWRKYLRPEWKKKDLPYKLIQLPAK 304

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD---TP 361
            NA+   K  F + N+ YMHDTP   LF   +R  + GC+R+   I++  +L +    + 
Sbjct: 305 GNALGRVKFLFPNGNSVYMHDTPAKSLFKRKIRAYSHGCIRLARPIEMLRYLAQHGYLSK 364

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            W++  +EE +K+ K   V L   +PVH  Y +A+  +   +QF  DIYG D +
Sbjct: 365 DWTQ--VEEELKSWKRHNVSLKEPIPVHVGYFTAYVSQGGGVQFFPDIYGYDQI 416


>gi|90578006|ref|ZP_01233817.1| hypothetical amidase [Vibrio angustum S14]
 gi|90441092|gb|EAS66272.1| hypothetical amidase [Vibrio angustum S14]
          Length = 569

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 7/283 (2%)

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  A+K F+  +GL   G++    +  +  P    +R   +NL R ++  + +     ++
Sbjct: 257 LNQAIKAFEENYGLKADGIIGPDVVSQLTRPYSSLVRLAALNLQR-ERFAQLEGDGPQII 315

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNIP   +   +N +    S +I G   R T +  S IN ++ NPYW +P +I  ++ + 
Sbjct: 316 VNIPDYKMTLYDNQEPVFESKIIDGMPKRPTNLFQSYINTVVINPYWYVPETIKVQNTIP 375

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNFI--FRQDPGKINAMASTKI 313
             + +P +L +N + +I+       V    +DW +  P  F   FRQDPG  NA+     
Sbjct: 376 SAKANPNFLANNRMDVINSWSDRSVVPPSSIDWATVNPKTFAHEFRQDPGPENALGRVAF 435

Query: 314 EFYSRNNTYMHD--TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
                 + YMHD    E  LF    R  +SGC+RV+    +  ++L      +   ++++
Sbjct: 436 LMPDSFSVYMHDESQSEYPLFKRRHRDLSSGCMRVQQPRKMATFILSYQNMPNLPSVDDM 495

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + T     + L T V +   Y++AW   +  +  R DIYG DN
Sbjct: 496 INTNNHREIGLNTHVNLDVAYLTAWVTPNGQLAMRPDIYGYDN 538


>gi|323497656|ref|ZP_08102673.1| hypothetical protein VISI1226_22555 [Vibrio sinaloensis DSM 21326]
 gi|323317405|gb|EGA70399.1| hypothetical protein VISI1226_22555 [Vibrio sinaloensis DSM 21326]
          Length = 469

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 123/219 (56%), Gaps = 6/219 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +  A+K FQ  HGL+P G++   TL+ +N+ +  R+  L +N  R++    +   +
Sbjct: 222 YDKSLVPAIKQFQQLHGLNPDGIIGPQTLKWLNLSLSSRLSTLALNAERVRYWPSEHDSI 281

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VN+P+  +    +GK    S V+VGR  R TP++ + ++ ++ NP W +P +I+ +
Sbjct: 282 --IVVNVPSYEMTYWHDGKAVFESKVVVGRKARPTPLMVTNLDTLILNPTWNVPWTIMVE 339

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPNFIFR--QDPGKINAMA 309
           D++  +++DP+Y+   +I ++ + G +  ++  E+DW S  P  F +R  Q  G  NA+ 
Sbjct: 340 DIIPKIQKDPEYITKQHIEILPKWGSKERIDPLEIDWESLNPKAFPYRMTQMSGSRNALG 399

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             K    +    Y+HDTP   LF+   R  +SGC+RV N
Sbjct: 400 LYKFNTPNNRAIYLHDTPSKGLFSQPKRAFSSGCIRVEN 438


>gi|190149392|ref|YP_001967917.1| hypothetical protein APP7_0123 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189914523|gb|ACE60775.1| Uncharacterized protein [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
          Length = 213

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 7/199 (3%)

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           +IVGR DR+TP+++S+++ ++ NP W IP +I+ KD++  L ++P +       + D KG
Sbjct: 1   MIVGRDDRRTPVMYSKLSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKG 60

Query: 279 KEVFVEEVDW----NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
            ++    V+W    NS   P +  RQ  G  +A+   K    S +  Y+HDTP   LF  
Sbjct: 61  NKINPRSVNWAQYVNSKNLP-YRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGK 119

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
             R  +SGCVRV    DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++
Sbjct: 120 TDRALSSGCVRVERSDDLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVT 178

Query: 395 AWSPKDSIIQFRDDIYGLD 413
           AW     +     DIY  D
Sbjct: 179 AWVENGKVYTL-PDIYKFD 196


>gi|89076172|ref|ZP_01162529.1| hypothetical amidase [Photobacterium sp. SKA34]
 gi|89048122|gb|EAR53707.1| hypothetical amidase [Photobacterium sp. SKA34]
          Length = 569

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 136/291 (46%), Gaps = 11/291 (3%)

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  A++ F+  +GL   G++    +  +  P     R   +NL R ++  + +     ++
Sbjct: 257 INQAIQAFEGNYGLKMDGIIGPDVMRQLTRPYSSLARIAALNLQR-ERFAQLEGDGPQII 315

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNIP   +   +N K    S +I G   R T +  S IN ++ NPYW +P +I  ++ + 
Sbjct: 316 VNIPDYKMTLYDNQKPIFESKIIDGIPKRPTNLFQSYINTVVINPYWYVPETIKVQNTIP 375

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNFI--FRQDPGKINAMASTKI 313
             + +P +L +N + +I+       V    +DW +  P  F   FRQDPG  NA+     
Sbjct: 376 SAKANPNFLANNRMDVINSWSDRSVVPPSSIDWATVNPKTFSHEFRQDPGPENALGRVAF 435

Query: 314 EFYSRNNTYMHD--TPEPILFNNVVRFETSGCVRVRNIIDLDVWLL--KDTPTWSRYHIE 369
                 + YMHD    E  LF    R  +SGC+RV+    +   +L  ++ PT     + 
Sbjct: 436 LMPDSFSVYMHDESQSEYPLFKRRHRDLSSGCMRVQQPRKMATLILSYQNMPTLP--SVN 493

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +++ T K   + L T V +   Y++AW  ++  +  R DIYG DN    +I
Sbjct: 494 DMINTNKHREIGLNTHVNLDVAYLTAWVTQNGQLAMRPDIYGYDNPGAKLI 544


>gi|145641085|ref|ZP_01796666.1| hypothetical protein CGSHiR3021_08446 [Haemophilus influenzae
           R3021]
 gi|145274246|gb|EDK14111.1| hypothetical protein CGSHiR3021_08446 [Haemophilus influenzae
           22.4-21]
          Length = 288

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 120/221 (54%), Gaps = 6/221 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 64  QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYS 120

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 121 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 180

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     L
Sbjct: 181 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSDQL 239

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
              LLK+   W+      V+ ++KTT   + ++ PV ++ +
Sbjct: 240 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFYIML 279


>gi|256423860|ref|YP_003124513.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256038768|gb|ACU62312.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 478

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 171/375 (45%), Gaps = 26/375 (6%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH 103
           Y ++ N+ F+  L +V+          S       +  IAFY D L R  +      P+ 
Sbjct: 118 YSALANNNFNKLLEKVEP---------SAPQYNALKSMIAFYNDRLQRQDY-----HPVK 163

Query: 104 LGNSSV--SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           + + +   S   L ++L   G LD       A +  +   ++  +        G +    
Sbjct: 164 ITSETADSSNHPLIDKLYQLGFLDAPD--YTAHEDTLRIKIRAAEYMFEFLEDGALRQGV 221

Query: 162 LEAMNVPVDLRIRQLQ--VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           +E +NV ++ R+ +L+  +N  R    L +   +  V+V+IPAA L         L S V
Sbjct: 222 IEELNVSLEKRLSELKHAINTFRWLNCLRKYQYV--VVVDIPAAELFVYLGDSTMLNSRV 279

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ-YLKDNNIHMIDEKG 278
           IVG+    +  L SRI+ ++  PYW +P +I  K+++  ++  P  YL+  N  ++D+ G
Sbjct: 280 IVGKAKTPSSPLASRIDEVILFPYWTVPHNIAVKELLPGIKGAPSIYLEAGNYQVLDKSG 339

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +  + ++WN+    NF +  RQ  G  N++   K+ F++  +TY+HDTP    F    
Sbjct: 340 RILDPQSINWNTLNKHNFPYTLRQMFGCDNSLGIIKLNFFNPYSTYLHDTPARSYFMFNS 399

Query: 337 RFETSGCVRVRNIIDLDVWLL-KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
           R+ + GC+RV + I L   L+  + P        +         + +   +PV  +Y  A
Sbjct: 400 RYFSHGCIRVEDAIPLAKLLVPAEAPRIDSLSRMKTPPAGSPITIPMKPGIPVIILYEVA 459

Query: 396 WSPKDSIIQFRDDIY 410
           W   +  ++F +D+Y
Sbjct: 460 WPDANGKVRFFEDVY 474


>gi|228472762|ref|ZP_04057520.1| peptidoglycan-binding domain 1 protein [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228275813|gb|EEK14579.1| peptidoglycan-binding domain 1 protein [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 559

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 151/328 (46%), Gaps = 9/328 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++   +G +  ++  LR  L   G   P +      D+ +  AVK FQ   G+   G+  
Sbjct: 229 LKSYTIGYADSTILALRACLKHKGYESPVQENPEQVDSLLVEAVKDFQRSIGIPADGVPG 288

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           + T+  + +    +   L +N+ R++    + +G  Y+LVNIP   L       +  ++ 
Sbjct: 289 AQTMGYLLMTAKEKRDLLLLNMERLR-WHNKDLGEDYILVNIPEYRLRLFHKDSLVFQTR 347

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL---RQDPQYLKDNNIHMID 275
           V+VG  +  TPI    +  + F P W +P+SI++K+M+  +   R   +Y K    + + 
Sbjct: 348 VVVGNPETPTPIFSDSLRYVEFRPTWSVPQSIVRKEMIPNIISSRDSLKYAKRG--YKLY 405

Query: 276 EKGKEVFVEEVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
           E  KE+   +V+W+        F F + P + N++   K   Y+  + Y+HDTP   LF 
Sbjct: 406 ENNKEIDPAKVNWHDERISKRAFYFVEAPSENNSLGLVKFVLYNDMSIYLHDTPSKRLFG 465

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT-RKTTPVKLATEVPVHFVY 392
           N  R  + GC+RV     L   LL+ +  W    ++E + T R    V+      +   Y
Sbjct: 466 NTQRTYSHGCIRVEYPERLATKLLRGSEEWDAEKVKEAMTTGRDQRRVRPKQHFVIDVSY 525

Query: 393 ISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           ++AW  ++  +  R+D Y  D   + I+
Sbjct: 526 LTAWVDEEGKLIIRNDPYQFDKEQLKIL 553


>gi|300023955|ref|YP_003756566.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525776|gb|ADJ24245.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 743

 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 152/345 (44%), Gaps = 42/345 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG     V  LR+RL +  +   +  L   +D  +  AVK +Q  +GL P G+V +  
Sbjct: 332 LRLGTRDDQVALLRQRLKVPSESPDANDL---YDDALLDAVKDYQRANGLTPDGLVGNGV 388

Query: 162 LEAMN-------VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
             A+N       +     + +L VN+ R + L E  +G  YV+ NIP  + E     +  
Sbjct: 389 RNALNGGGKSKRIDPARNVDRLIVNMERWRWLPEN-LGSFYVMNNIPEYTSEIWRGKERV 447

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           L   +IVG+    TP+L + +  ++F P W +P  I  K++   L+Q      +      
Sbjct: 448 LNQRMIVGQPSWPTPVLTASMQYVIFRPSWGMPDGIKAKELAPRLKQ----ASNTGYDFF 503

Query: 275 DE-------------------------KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           D+                          G+ V    V+WN+ +   + F Q PG  N + 
Sbjct: 504 DQLFGGGGGGNSGGARVLQAYKLQVSFNGRPVDPNSVNWNTADIRRYSFVQPPGPDNPLG 563

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F ++++ YMHDTPE  LF    R  + GC+RV +       +L++   +S   + 
Sbjct: 564 MVKFRFPNKHDVYMHDTPERGLFGQANRALSHGCLRVGDPRRTAEVILQEDKGYSAEKVG 623

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           E+        V L+  VPV+ VY +A   +D  ++   DIYG DN
Sbjct: 624 ELWNGGAD--VTLSKPVPVYLVYFTARVDEDGKLRTYGDIYGNDN 666


>gi|262361436|gb|ACY58157.1| hypothetical protein YPD4_1249 [Yersinia pestis D106004]
          Length = 205

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 6/188 (3%)

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVD 287
           + S +N ++ NP W +P S++++D++   R D  Y + N   ++     +  V     +D
Sbjct: 1   MSSALNNVVVNPPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMID 60

Query: 288 WNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           W+   P NF +R  Q PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVR
Sbjct: 61  WSIISPNNFPYRLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVR 120

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V    DL   LL+D   W+   +   VK   TT V +   VPV   Y++AW  +D   QF
Sbjct: 121 VNKASDLANMLLQDA-GWNDARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQF 179

Query: 406 RDDIYGLD 413
           R DIY  D
Sbjct: 180 RTDIYNYD 187


>gi|145637696|ref|ZP_01793349.1| hypothetical protein CGSHiHH_01956 [Haemophilus influenzae PittHH]
 gi|145269098|gb|EDK09048.1| hypothetical protein CGSHiHH_01956 [Haemophilus influenzae PittHH]
          Length = 461

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 353

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSEQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
              LLK+   W+      V+ ++K T   + ++ PV ++ +
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKNTSAPIRSDNPVFYIML 452


>gi|220920262|ref|YP_002495563.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219944868|gb|ACL55260.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 670

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 127/274 (46%), Gaps = 19/274 (6%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            AV+ FQ   GL  +G+++  T+ A+  P   R     +  M   + L   +G  +V VN
Sbjct: 303 GAVERFQRERGLAATGILNPETVAALAGPSPGRQEADLLANMERWRWLPADLGKTHVWVN 362

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP   +  V   +V   + VIVG+ D  TP+    +   + NP W +P SI++ + +  L
Sbjct: 363 IPEYKVRVVSGTRVVDEARVIVGKPDSPTPVFSGEMTYAVVNPSWNVPPSILKNEFLPRL 422

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
            +DP Y       ++  +G  + +               RQ PG+ NA+   K  F + +
Sbjct: 423 ARDPTYAARLGYEVV-RRGNGIAI---------------RQPPGERNALGFIKFMFPNDH 466

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             Y+HDTP   LF    R  + GCVRV +       +L   PTW    ++ ++   + T 
Sbjct: 467 AVYLHDTPNRALFARSARALSHGCVRVDDPFRFAEVVL--GPTWPTERLKRLIGKGERT- 523

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           V L  ++PVH  Y +  + +   ++  DD+YG++
Sbjct: 524 VMLPEKLPVHLAYFTLVADEAGTLRQFDDLYGIN 557


>gi|330448515|ref|ZP_08312163.1| hypothetical protein PMSV_2819 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492706|dbj|GAA06660.1| hypothetical protein PMSV_2819 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 569

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 7/283 (2%)

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  A+K F+  +GL   G++    +  +  P     R   +NL R ++  + +     ++
Sbjct: 257 MNQAIKAFETNYGLKADGIMGPEVVAQLTCPYSSLARIAALNLQR-ERFAQLEGDGPQII 315

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNIP  ++   +N K    S +I G   R T +  + IN ++ NPYW +P +I  ++ + 
Sbjct: 316 VNIPDYTMTLYDNQKPVFESDIIDGMPKRPTNLFQTYINTVVINPYWYVPETIKVQNTIP 375

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFV--EEVDWNSPEPPNFI--FRQDPGKINAMASTKI 313
             + +P +L+ N + +I+       V    ++W +  P  F   FRQDPG  NA+     
Sbjct: 376 SAKANPNFLQRNRMDVINSWSDRSVVPPSSINWATVNPKTFPHEFRQDPGPENALGRVAF 435

Query: 314 EFYSRNNTYMHD--TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
                 + YMHD    E  LF    R  +SGC+RV+   ++   +L      +   ++++
Sbjct: 436 LMPDSFSVYMHDEEQSEYPLFKRRHRDLSSGCMRVQKPREMAKLILSYQNMPNLPSVDDM 495

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + + K   + L   V +   Y+++W   D  +  R DIYG DN
Sbjct: 496 INSNKHREIGLKKHVDLDVAYLTSWVTPDGQLAMRPDIYGYDN 538


>gi|294012199|ref|YP_003545659.1| hypothetical protein SJA_C1-22130 [Sphingobium japonicum UT26S]
 gi|292675529|dbj|BAI97047.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
          Length = 503

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 145/337 (43%), Gaps = 39/337 (11%)

Query: 92  GGWPELPI------RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           GG P++P+      RP            LR RL ++           A+D  + + VK F
Sbjct: 193 GGLPQVPVPADVKLRP----GMKAGAAALRRRLGLAS--------GTAYDKALVARVKAF 240

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q  HGL P G+  ++T+ A+N   D   R + +N+ R + L   +  +R+V+V+  +A L
Sbjct: 241 QGDHGLKPDGVAGAATIAALNRGDDHYDRLIALNMERARLLPGPQ--VRHVVVDAASARL 298

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
                G       V+VG  + QTP++   +     NPYW +P  ++++ +   +      
Sbjct: 299 WYFSKGAQDGTMKVVVGAKESQTPMMAGMVRYATLNPYWNVPSDLVERKLAPRMLNGASL 358

Query: 266 LKDNNIHMID--EKGKEVFVEEVDWNS--PEPPNFIFRQDPGKINAMASTKIEFYSRNNT 321
            K     + D     +++    VDW +          RQ PG  NAM   K  F +    
Sbjct: 359 TKLRYEALSDWSANARKLDPAAVDWRAVADGRTELRVRQLPGGDNAMGKVKFMFPNDLGI 418

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP-- 379
           Y+HDTP   L     R  ++GCVR           L+D     R+   + +K     P  
Sbjct: 419 YLHDTPSRDLLAKPARQFSNGCVR-----------LEDAQRLGRWFFGKPLKPASDKPEQ 467

Query: 380 -VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            V L   VPV+  Y++A  P +  ++F  D+YG D V
Sbjct: 468 HVPLPQPVPVYLTYLTA-VPLEDGVRFLPDVYGRDGV 503


>gi|312115661|ref|YP_004013257.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220790|gb|ADP72158.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 569

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 9/250 (3%)

Query: 171 LRIRQLQVNLMRIKKLLEQ------KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           LR ++      R+   +EQ       +G  YV  NIP  +   V+NG+V  +  ++ G++
Sbjct: 250 LRDKKQSAEAKRLLANMEQWRWMPADLGDLYVWNNIPEYTQRVVKNGEVVRKERIVTGQL 309

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           D+QTP+    + +I F P W++P SI  ++++  L++    +++  + + D+ G+ V   
Sbjct: 310 DKQTPVFTRTLKKITFKPTWIVPESIKVREILPSLQRGGGMMREWQLELRDKDGQTVDWR 369

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT--PEPILFNNVVRFETSG 342
            ++W   +   F   Q  G  + M   K  F S++  +MHD   P+  +FN   R  + G
Sbjct: 370 RINWYRTDIRIFNVVQPNGAKSVMGKVKFSFPSQHTVFMHDAYPPDKWMFNKARRTYSHG 429

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT-TPVKLATEVPVHFVYISAWSPKDS 401
           C+RV+N I L   LLK+   +    + + V+T        +   +P+H  Y +A    D 
Sbjct: 430 CMRVQNPIGLAEILLKEDKGFEAAQVRDAVRTGGNDNEFDIERRIPIHMTYFTALVGDDG 489

Query: 402 IIQFRDDIYG 411
            +    D+YG
Sbjct: 490 KLHTFPDVYG 499


>gi|326798188|ref|YP_004316007.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
 gi|326548952|gb|ADZ77337.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
          Length = 487

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 112/223 (50%), Gaps = 3/223 (1%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           + VNIPA  L  + +     +  V+VG+ D  +TP+L S+I+ +  NP W IP SI +K+
Sbjct: 259 IYVNIPAYQLYIIRDRSTKGQMKVVVGKADGHETPMLASKIHSVQVNPIWNIPTSIAKKE 318

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQDPGKINAMASTK 312
           ++   + D  YL ++ + +     K    + +DW+     N  + F+Q PG  N++   K
Sbjct: 319 ILVQAKADKYYLANHGMDVYRRGVKIANPDTIDWSVYNEENLPYSFKQQPGNTNSLGLIK 378

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F + ++ Y+HDTP   +F+  +R  + GCVRV   +DL   L  +   +     E   
Sbjct: 379 FLFKNGSSVYLHDTPAKAVFSRSMRAASHGCVRVEKPLDLARALFGEGEKYDLIKEEMSS 438

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           +      + L  +VPV   Y++      S ++F  D+Y LD++
Sbjct: 439 EEPVAKTIGLKPQVPVVLDYVTCKMDSSSTLKFYPDVYKLDSL 481


>gi|326388316|ref|ZP_08209912.1| hypothetical protein Y88_3197 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207048|gb|EGD57869.1| hypothetical protein Y88_3197 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 386

 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 25/245 (10%)

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R   L  N+ R +  L Q +G  YVLVN  A  +    +G+      V+VG+    TP  
Sbjct: 153 RRATLATNMDRWR-WLPQSLGADYVLVNAAAFEVRLWRHGQQVGTWPVVVGKTKSPTPTF 211

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN-IHMIDEKGKEVFVEEVDWNS 290
            ++++ + FNP+W IP +I+++ +  ++R+ P   +    IH                  
Sbjct: 212 SAQVSGVTFNPWWDIPPAIVRESIGGMMRRHPALARQRGYIHT----------------- 254

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                  +RQ PG  NA+   K+   +  N Y+HDTPE  LF    R  + GC+RV + I
Sbjct: 255 ----GASYRQKPGPANALGQMKLVMPNPFNVYLHDTPEKKLFARDTRAFSHGCIRVSDAI 310

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
                L++D    S   ++ ++ T +TT V L   +PV+  Y +A +  D  +    DIY
Sbjct: 311 GFATTLVQDVK--SADEVKAIIATGRTTTVDLPMHLPVYVTYFTATTRSDGTLAILPDIY 368

Query: 411 GLDNV 415
             D  
Sbjct: 369 KRDGT 373


>gi|255036894|ref|YP_003087515.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
 gi|254949650|gb|ACT94350.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
          Length = 398

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 114/218 (52%), Gaps = 4/218 (1%)

Query: 194 RYVLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           R+VLVNI  A L A+++ G+  L    +VG+ D  TP + +    I+ +PYW +P+SI  
Sbjct: 172 RFVLVNIRGAYLTAMDSAGQNVLTMRTVVGKRDTPTPTIDTYATSIVTHPYWNVPKSIAI 231

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMAS 310
           K++      DP+YL  N I +I + G+ +  +E+DW   + E   + FRQ+ G+ N++  
Sbjct: 232 KEIFPKAAADPEYLSRNRIQVIGKDGQAIDPQELDWGDLTAEKFPYRFRQETGEDNSLGL 291

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K+E  +    Y+HDT    LF +  R+ + GCVRV+   DL  ++       S +  E 
Sbjct: 292 LKVEIKNPLAIYLHDTNARYLFKSGQRWRSHGCVRVQYPTDLANYMAGSKLLDSDFMTEP 351

Query: 371 VVKTRKTTPVKLATEVPVHFVYISA-WSPKDSIIQFRD 407
              +      KL   +PV  +Y+ A  +PK  ++ F D
Sbjct: 352 DSVSHPPKWHKLQVRIPVFLLYLPADCNPKGDLMYFPD 389


>gi|300778249|ref|ZP_07088107.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300503759|gb|EFK34899.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 468

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 13/252 (5%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLR---YVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
           +  I+++ +N+ R++      MG+    Y+LVNIPA SL+ V+  K  L   VIVG+   
Sbjct: 215 EAEIKKVAINMERLRW-----MGISSDAYLLVNIPAYSLDFVQKDKT-LHYKVIVGKPST 268

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
            +P+L SR++     P W +P++I  K+M+  + ++ QYL++++  + D  GK V V   
Sbjct: 269 PSPVLKSRVDYFTTAPDWKVPQNIFIKEMLPKIIKNSQYLEEHHYSLYDRSGKIVPVTSA 328

Query: 287 DWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                  +P  +  RQ  G  NA+ +    F +    Y+HDT +  LF    R  + GC+
Sbjct: 329 KLKQAYRKPYQYSIRQSSGCDNALGAVVFRFSNSYGVYLHDTSQKQLFEKTQRALSHGCI 388

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR-KTTPVKLATEVPVHFVYISAWSPKDSII 403
           RV N  DL   LLK   T     + +    R +     L   VP+   Y++    K+  +
Sbjct: 389 RVENAGDLAAQLLKHDGTEDEIPLMKSFMDRYERKDFVLKQPVPIMITYLTCLV-KNGKM 447

Query: 404 QFRDDIYGLDNV 415
            F +DIY LD V
Sbjct: 448 VFYNDIYNLDPV 459


>gi|42524313|ref|NP_969693.1| putative amidase [Bdellovibrio bacteriovorus HD100]
 gi|39576522|emb|CAE80686.1| putative amidase [Bdellovibrio bacteriovorus HD100]
          Length = 510

 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 159/344 (46%), Gaps = 28/344 (8%)

Query: 92  GGWPEL-PIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           G W ++ P+  PL L +    ++ ++ RL + G     + +   FD  +  AV   Q   
Sbjct: 158 GTWQDIVPVTTPLRLYSIHPVIREIKSRLALLGYT--MRNMDDRFDGDLLKAVTDIQWNM 215

Query: 150 GLDPSGMVD--SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
            + P G +         ++V    R+RQ+QV++ +++    Q    +Y+ VN+  +    
Sbjct: 216 RIRPDGEISPKGKVWSFLSVSCMDRVRQIQVDMEKMR-WFPQYFEKKYIFVNLAMSYFIM 274

Query: 208 VENGKVGLRST---VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR---- 260
           ++      R      I GR  R++P +   I  ++ NP+WV+P +I  +D +  L+    
Sbjct: 275 MDQSTDWPRVMSFRTINGRPARKSPTMRDEIVNVIINPFWVVPPTIFYEDKVNDLKDLTS 334

Query: 261 -QDPQYLKDNNIHM-IDEKGKEVFVEEVDWNSPEP----PNFIFRQDPGKINAMASTKIE 314
            Q  +Y   ++    +    ++V    +DW         P+ I RQ P   NA+   K +
Sbjct: 335 EQIREYFDSHHYEAWVGGFRRKVDPTTIDWKGIAAGTVDPDIIIRQLPHLGNALGVLKFD 394

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE----- 369
             +    Y+HDT +  LF+  +R  +SGCVR+   +DL  +LL+DTP W R  I      
Sbjct: 395 LTNSFAIYLHDTNQRELFDTPMRQLSSGCVRLEKPLDLAEYLLEDTP-WDRQTIASMMAR 453

Query: 370 --EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
             EVV      PV     +PV+  Y+++    D +++F DDIYG
Sbjct: 454 PGEVVAKPTEIPVPSYKRMPVYTAYLTSMMNSDEVVRFVDDIYG 497


>gi|296445064|ref|ZP_06887025.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296257485|gb|EFH04551.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 518

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 19/242 (7%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           D R+R   +  M   + + + +G   + VNIP   L  + +G+V  R+ VIVG+    TP
Sbjct: 283 DTRLRAEIIANMERWRWMPRDLGENRIEVNIPDFELAVIRDGEVTHRARVIVGKEGTPTP 342

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +  + +  I+ NPYW +P SI+ K+M+      P++  D  +  I  +G EV        
Sbjct: 343 VFSNAMQFIIVNPYWNVPPSILNKEML------PKFGGD--LQAIAARGYEVVYRNG--- 391

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                +   RQ PG+ NA+   K  F +  + Y+HDTP   LF +  R  + GCVRV   
Sbjct: 392 -----HARVRQRPGEGNALGRIKFMFPNDFSVYLHDTPSRALFASTHRAFSHGCVRVDQP 446

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
                 +L     W    ++ ++  ++   + LA  +P+H  Y +A+  +   +Q R D+
Sbjct: 447 FRFAEAVLGS--GWREERVKRLIGDQERY-INLARPLPIHIEYFTAYVDESGRLQLRGDL 503

Query: 410 YG 411
           YG
Sbjct: 504 YG 505


>gi|145629244|ref|ZP_01785043.1| hypothetical protein CGSHi22121_10590 [Haemophilus influenzae
           22.1-21]
 gi|144978747|gb|EDJ88470.1| hypothetical protein CGSHi22121_10590 [Haemophilus influenzae
           22.1-21]
          Length = 459

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 6/204 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 235 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMYS 291

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS-PE 292
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S   
Sbjct: 292 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIGN 351

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     L
Sbjct: 352 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQL 410

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRK 376
              LLK+   W+      V+ ++K
Sbjct: 411 ASILLKEA-GWTETRKNTVLASKK 433


>gi|295086942|emb|CBK68465.1| Uncharacterized protein conserved in bacteria [Bacteroides
           xylanisolvens XB1A]
          Length = 513

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 19/258 (7%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHS 233
           +L VN+ R +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L S
Sbjct: 242 RLLVNMERARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSS 301

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           RI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W     
Sbjct: 302 RIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAG 361

Query: 294 PN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D
Sbjct: 362 KGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALD 421

Query: 352 LDVWLLKDTPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVHFVYISA 395
              +LLK+              I+ V +  K  PV  A            +P+   Y + 
Sbjct: 422 FAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTV 481

Query: 396 WSPKDSIIQFRDDIYGLD 413
           +   D+ +++ +DIY  D
Sbjct: 482 YLSADNNLRYCEDIYKYD 499


>gi|298481479|ref|ZP_06999671.1| periplasmic protein [Bacteroides sp. D22]
 gi|298272343|gb|EFI13912.1| periplasmic protein [Bacteroides sp. D22]
          Length = 513

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 19/258 (7%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHS 233
           +L VN+ R +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L S
Sbjct: 242 RLLVNMERARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSS 301

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           RI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W     
Sbjct: 302 RIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAG 361

Query: 294 PN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D
Sbjct: 362 KGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALD 421

Query: 352 LDVWLLKDTPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVHFVYISA 395
              +LLK+              I+ V +  K  PV  A            +P+   Y + 
Sbjct: 422 FAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTV 481

Query: 396 WSPKDSIIQFRDDIYGLD 413
           +   D+ +++ +DIY  D
Sbjct: 482 YLSADNNLRYCEDIYKYD 499


>gi|312886219|ref|ZP_07745834.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311301326|gb|EFQ78380.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 542

 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 51/310 (16%)

Query: 156 MVDSSTLEAMNVPVD---LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           +V    L AM+   +   L++R +++N+ R++     K   RY+ VNIPA  L+ +EN K
Sbjct: 223 LVLKKELAAMSTVTNADSLQLRTIKLNMERLRWQTPAKDS-RYLWVNIPAFKLQWIENKK 281

Query: 213 VGLRSTVIVGR-----------------------VDRQTPILHSRINRIMFNPYWVIPRS 249
           V     V +G                        V+ +T IL SRIN I  NP W IP S
Sbjct: 282 VVFDMKVCLGEPKPAGYDTMLLRYLKTHSIDDKPVNHETTILCSRINTIQLNPNWNIPSS 341

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQDPGKINA 307
           I Q ++   + ++P YL +NNI +  +       + + W   +     + F+QD  ++NA
Sbjct: 342 IAQNEIYYAILRNPAYLSNNNIRVYYKDKLVTQPDTIRWGRIQRQKIPYKFKQDASELNA 401

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR-------------NIID--- 351
           +   K  F +    Y+HDTP    F +  R  + GCVRV              N++D   
Sbjct: 402 LGKFKFIFDNEAGIYLHDTPNKKAFGSSWRAVSHGCVRVEDPLKLSEALVNDTNMVDNIR 461

Query: 352 LDVWL----LKDTPTWSRYHIEEVVK--TRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           ++V L    LKDT  ++    +  VK    K+  + L  ++ +   Y + W  ++  + F
Sbjct: 462 MEVGLKPVNLKDTTKYNAIQAKRAVKGFELKSKYIGLKPDMQLFIDYYTCWPDENGKLVF 521

Query: 406 RDDIYGLDNV 415
             D Y +D V
Sbjct: 522 YADAYRMDTV 531


>gi|294646674|ref|ZP_06724299.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
 gi|294807105|ref|ZP_06765923.1| conserved domain protein [Bacteroides xylanisolvens SD CC 1b]
 gi|292637962|gb|EFF56355.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
 gi|294445671|gb|EFG14320.1| conserved domain protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 521

 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 30/311 (9%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM--------NVPVDLRIRQLQVNLMR 182
           + A D+   + +  F   HG  PS  +     E +            D    +L VN+ R
Sbjct: 201 NAALDSLRANPIAAF---HGAQPSSPLYRKMQEELVRVNAWGKTDTTDYYRNRLLVNMER 257

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
            +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L SRI  +  N
Sbjct: 258 ARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSSRIYYMELN 317

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFR 299
           PYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W         +  +
Sbjct: 318 PYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAGKGVPYTVK 377

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D   +LLK+
Sbjct: 378 QDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALDFAFFLLKE 437

Query: 360 TPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVHFVYISAWSPKDSII 403
                         I+ V +  K  PV  A            +P+   Y + +   D+ +
Sbjct: 438 PDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTVYLSADNNL 497

Query: 404 QFRDDIYGLDN 414
           ++ +D Y  D+
Sbjct: 498 RYCEDTYKYDS 508


>gi|262408643|ref|ZP_06085189.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|262353508|gb|EEZ02602.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
          Length = 513

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 30/311 (9%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM--------NVPVDLRIRQLQVNLMR 182
           + A D+   + +  F   HG  PS  +     E +            D    +L VN+ R
Sbjct: 193 NAALDSLRANPIAAF---HGAQPSSPLYRKMQEELVRVNAWGKTDTTDYYRNRLLVNMER 249

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
            +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L SRI  +  N
Sbjct: 250 ARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSSRIYYMELN 309

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFR 299
           PYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W         +  +
Sbjct: 310 PYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAGKGVPYTVK 369

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D   +LLK+
Sbjct: 370 QDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALDFAFFLLKE 429

Query: 360 TPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVHFVYISAWSPKDSII 403
                         I+ V +  K  PV  A            +P+   Y + +   D+ +
Sbjct: 430 PDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTVYLSADNNL 489

Query: 404 QFRDDIYGLDN 414
           ++ +D Y  D+
Sbjct: 490 RYCEDTYKYDS 500


>gi|237715634|ref|ZP_04546115.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229444343|gb|EEO50134.1| conserved hypothetical protein [Bacteroides sp. D1]
          Length = 518

 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 137/311 (44%), Gaps = 30/311 (9%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM--------NVPVDLRIRQLQVNLMR 182
           + A D+   + +  F   HG  PS  +     E +            D    +L VN+ R
Sbjct: 198 NAALDSLRANPIAAF---HGAQPSSPLYRKMQEELVRVNAWGKTDTTDYYRNRLLVNMER 254

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
            +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L SRI  +  N
Sbjct: 255 ARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSSRIYYMELN 314

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFR 299
           PYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W         +  +
Sbjct: 315 PYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAGKGVPYTVK 374

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D   +LLK+
Sbjct: 375 QDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALDFAFFLLKE 434

Query: 360 TPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVHFVYISAWSPKDSII 403
                         I+ V +  K  PV  A            +P+   Y + +   D+ +
Sbjct: 435 PDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTVYLSADNNL 494

Query: 404 QFRDDIYGLDN 414
           ++ +D Y  D+
Sbjct: 495 RYCEDTYKYDS 505


>gi|284036319|ref|YP_003386249.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
 gi|283815612|gb|ADB37450.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
          Length = 403

 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 8/224 (3%)

Query: 194 RYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           ++VLVNIPA  L   +  GK  L   VI G+ D+ TP + + I  I+  PYW +P++I  
Sbjct: 181 QFVLVNIPAGELNVFDRTGKRLLPMQVISGKPDKMTPCMVTYIQDIVMYPYWNVPQNIAL 240

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
            +M+  +++D  Y+ + N+ ++D K KEV  EE+DW S    NF +  RQ  G  N++  
Sbjct: 241 DEMLPRMKRDLSYIYNQNLQILDAKNKEVDPEEIDWESLSETNFPYRVRQASGCENSLGL 300

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVV-RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
            K    +    Y+HDT    LF +    + + GCVRV+  ++L   +L      + +  +
Sbjct: 301 LKFNLANPLAIYLHDTNSRDLFKSTKDHWRSHGCVRVQKPVELANLILGAKTFDADFMNK 360

Query: 370 EVVKTR-KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
            ++  + KT P K   + PV   Y  A       + F +D+Y L
Sbjct: 361 CLIDQKPKTLPTK---KFPVFITYNIADVDAAGKLHFYNDVYSL 401


>gi|218458323|ref|ZP_03498414.1| hypothetical protein RetlK5_02246 [Rhizobium etli Kim 5]
          Length = 90

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/72 (61%), Positives = 56/72 (77%)

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV+N+ DL  WLL++TP WSR  +E+V+ +   TP+KLA EVPV+FVYISAW   D 
Sbjct: 1   GCVRVQNVRDLTNWLLRETPGWSRQQMEQVIASGVNTPIKLAAEVPVYFVYISAWGMPDG 60

Query: 402 IIQFRDDIYGLD 413
           I+QFRDDIY +D
Sbjct: 61  IVQFRDDIYQMD 72


>gi|237721416|ref|ZP_04551897.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229449212|gb|EEO55003.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 518

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 19/258 (7%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHS 233
           +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L S
Sbjct: 247 RLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLSS 306

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           RI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W     
Sbjct: 307 RIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSIKWAKYAG 366

Query: 294 PN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D
Sbjct: 367 SGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALD 426

Query: 352 LDVWLLKDTPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVHFVYISA 395
              +LLK+              I+ V +  K  P+  A            +P+   Y + 
Sbjct: 427 FAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQTV 486

Query: 396 WSPKDSIIQFRDDIYGLD 413
           +   D+ +++ +DIY  D
Sbjct: 487 YLSADNNLRYCEDIYKYD 504


>gi|260171549|ref|ZP_05757961.1| ErfK/YbiS/YcfS/YnhG family protein [Bacteroides sp. D2]
          Length = 518

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 19/258 (7%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHS 233
           +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L S
Sbjct: 247 RLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLSS 306

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           RI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W     
Sbjct: 307 RIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSIKWAKYAG 366

Query: 294 PN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D
Sbjct: 367 SGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALD 426

Query: 352 LDVWLLKDTPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVHFVYISA 395
              +LLK+              I+ V +  K  P+  A            +P+   Y + 
Sbjct: 427 FAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQTV 486

Query: 396 WSPKDSIIQFRDDIYGLD 413
           +   D+ +++ +DIY  D
Sbjct: 487 YLSTDNNLRYCEDIYKYD 504


>gi|160887148|ref|ZP_02068151.1| hypothetical protein BACOVA_05164 [Bacteroides ovatus ATCC 8483]
 gi|156107559|gb|EDO09304.1| hypothetical protein BACOVA_05164 [Bacteroides ovatus ATCC 8483]
          Length = 513

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 19/258 (7%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHS 233
           +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L S
Sbjct: 242 RLLVNMERARWQYALDKGQKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLSS 301

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           RI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W     
Sbjct: 302 RIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSIKWAKYAG 361

Query: 294 PN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D
Sbjct: 362 SGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALD 421

Query: 352 LDVWLLKDTPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVHFVYISA 395
              +LLK+              I+ V +  K  P+  A            +P+   Y + 
Sbjct: 422 FAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQTV 481

Query: 396 WSPKDSIIQFRDDIYGLD 413
           +   D+ +++ +DIY  D
Sbjct: 482 YLSADNNLRYCEDIYKYD 499


>gi|315919863|ref|ZP_07916103.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693738|gb|EFS30573.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 513

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 19/258 (7%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHS 233
           +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L S
Sbjct: 242 RLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLSS 301

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           RI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W     
Sbjct: 302 RIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSIKWAKYAG 361

Query: 294 PN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D
Sbjct: 362 SGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALD 421

Query: 352 LDVWLLKDTPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVHFVYISA 395
              +LLK+              I+ V +  K  P+  A            +P+   Y + 
Sbjct: 422 FAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQTV 481

Query: 396 WSPKDSIIQFRDDIYGLD 413
           +   D+ +++ +DIY  D
Sbjct: 482 YLSTDNNLRYCEDIYKYD 499


>gi|293370854|ref|ZP_06617399.1| conserved domain protein [Bacteroides ovatus SD CMC 3f]
 gi|292634070|gb|EFF52614.1| conserved domain protein [Bacteroides ovatus SD CMC 3f]
          Length = 513

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 19/258 (7%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHS 233
           +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L S
Sbjct: 242 RLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLSS 301

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           RI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W     
Sbjct: 302 RIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGFQVDPHSIKWAKYAG 361

Query: 294 PN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D
Sbjct: 362 SGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALD 421

Query: 352 LDVWLLKDTPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVHFVYISA 395
              +LLK+              I+ V +  K  P+  A            +P+   Y + 
Sbjct: 422 FAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQTV 481

Query: 396 WSPKDSIIQFRDDIYGLD 413
           +   D+ +++ +DIY  D
Sbjct: 482 YLSADNNLRYCEDIYKYD 499


>gi|299148640|ref|ZP_07041702.1| putative periplasmic protein [Bacteroides sp. 3_1_23]
 gi|298513401|gb|EFI37288.1| putative periplasmic protein [Bacteroides sp. 3_1_23]
          Length = 513

 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 120/258 (46%), Gaps = 19/258 (7%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHS 233
           +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L S
Sbjct: 242 RLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLSS 301

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           RI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W     
Sbjct: 302 RIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSIKWAKYAG 361

Query: 294 PN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D
Sbjct: 362 SGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALD 421

Query: 352 LDVWLLKDTPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVHFVYISA 395
              +LLK+              I+ V +  K  P+  A            +P+   Y + 
Sbjct: 422 FAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQTV 481

Query: 396 WSPKDSIIQFRDDIYGLD 413
           +   D+ +++ +DIY  D
Sbjct: 482 YLSTDNNLRYCEDIYKYD 499


>gi|170749212|ref|YP_001755472.1| peptidoglycan binding domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655734|gb|ACB24789.1| peptidoglycan-binding domain 1 protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 674

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 144/329 (43%), Gaps = 37/329 (11%)

Query: 97  LPIRP-LHLGNSSVSVQRLRERLII----SGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           LP  P L +G     V  LR    +    +  LD   G    +D+ V  AV  FQ   GL
Sbjct: 269 LPAGPVLRVGMRDARVPLLRAHFNLENRPAATLDKGPGEPEEYDSGVADAVAKFQRGRGL 328

Query: 152 DPSGMVDSSTLEAMN------VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
             +G ++  T+ A+        P      +L VN+ R +  L   +G  Y+LVN+P   L
Sbjct: 329 PGNGTLNVQTVLALADAGRTARPTGGEA-ELIVNMERWR-WLPGDLGSDYILVNVPEYRL 386

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
            A   G +   + VIVG+ + +TP+    +   + NP W +P SI               
Sbjct: 387 RAYRGGVMRDEARVIVGKPESRTPLFSGMMEYAVVNPSWYVPPSI--------------- 431

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
           LK     +    GK     EV        +   RQ PG+ NA+   K  F +++  Y+HD
Sbjct: 432 LKTMAPKLAGYGGKTWGGYEVVRRGG---HISLRQPPGERNALGFIKFMFPNQHAVYLHD 488

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDL-DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           TP   LF+   R  + GCVRV +   L DV L    P WS   +++++   + T ++L  
Sbjct: 489 TPNRSLFSASKRDFSHGCVRVDDPFRLADVVL----PNWSEDRLKKLIGKGERT-IRLPE 543

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           ++PVH  Y +A+       +   D+YG D
Sbjct: 544 KLPVHLAYFTAFVDDGGTYRTLPDLYGYD 572


>gi|262040976|ref|ZP_06014198.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041670|gb|EEW42719.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 466

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 5/183 (2%)

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPE 292
           +N ++ NP W +P ++ +KD++  +R +P YL+ +   ++     +  ++   VDW++  
Sbjct: 267 LNNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTIT 326

Query: 293 PPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
             N  F F+Q PG  N++   K    S +  Y+HDTP   LF   VR  +SGCVRV    
Sbjct: 327 ENNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKAS 386

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY
Sbjct: 387 ELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDIY 445

Query: 411 GLD 413
             D
Sbjct: 446 NYD 448


>gi|153807673|ref|ZP_01960341.1| hypothetical protein BACCAC_01955 [Bacteroides caccae ATCC 43185]
 gi|149130035|gb|EDM21247.1| hypothetical protein BACCAC_01955 [Bacteroides caccae ATCC 43185]
          Length = 514

 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 19/264 (7%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQ 227
            D    +L VN+ R +     + G +YV+ N  A  L+AV E     L   + VG V  +
Sbjct: 237 TDYYRNRLLVNMERARWQYALEKGKKYVVANTAAFMLQAVNEETDSILEMRICVGSVKNR 296

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           TP+L S+I  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + 
Sbjct: 297 TPLLSSKIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGTQVDPHSIK 356

Query: 288 WNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           W         +  +QD    N++      F +  + Y+HDTP    F+   R  + GCVR
Sbjct: 357 WAKYAGKGVPYTVKQDNKAGNSLGRIIFRFPNPYSVYLHDTPSKWAFSRKNRAVSHGCVR 416

Query: 346 VRNIIDLDVWLLKDTPTWSR------YHIEEVVKTRKTTPVKLATE----------VPVH 389
           ++  +D   +LLK+              I+ V +  K  P+  A            +P+ 
Sbjct: 417 LQKALDFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLF 476

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y + +   D+ +++ +DIY  D
Sbjct: 477 IDYQTVYLSADNNMRYCEDIYNYD 500


>gi|323137795|ref|ZP_08072871.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322397092|gb|EFX99617.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 495

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 17/221 (7%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +G   + VNIP   L    +G    R+ V+VG+    TP+    +  ++ NP W +P+SI
Sbjct: 279 LGATRIEVNIPQFELALTRDGVKTHRTRVVVGKTSTPTPVFSDTMRYVVINPSWSVPQSI 338

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
           I K+M      D  YL      +    G+                   RQ PG+ NA+  
Sbjct: 339 ITKEMAGKHGGDLSYLAARGFKVSYSNGRAS----------------VRQPPGEKNALGR 382

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F +  + Y+HDTP   LF    R  + GCVRV     L   +L     W+   +  
Sbjct: 383 VKFVFPNEFSVYLHDTPSRSLFATARRAYSHGCVRVDQPFALAEAVLTADAGWTEKRLRG 442

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           +V   +   + LA  +PVH  Y +A    D  ++  DDIYG
Sbjct: 443 MVGASERR-IDLARPMPVHIEYFTATVDADGQLRLFDDIYG 482


>gi|289804603|ref|ZP_06535232.1| hypothetical protein Salmonellaentericaenterica_09007 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 443

 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 8/188 (4%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKM 191
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  E   
Sbjct: 258 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELST 317

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 318 G---IMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 374

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EVDWNSPEPPN--FIFRQDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  ++  +VDW +  P N  F F+Q PG  N+
Sbjct: 375 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 434

Query: 308 MASTKIEF 315
           +   K   
Sbjct: 435 LGRYKFNM 442


>gi|300727069|ref|ZP_07060488.1| putative cell wall degradation protein [Prevotella bryantii B14]
 gi|299775613|gb|EFI72204.1| putative cell wall degradation protein [Prevotella bryantii B14]
          Length = 507

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 129/267 (48%), Gaps = 14/267 (5%)

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQK--MGLRYVLVNIPAASLEAVENGKVGLRS 217
           S L+  N+  + R R L VN+ R +  L     +  +YV+VNIPA SL AV+  KV  + 
Sbjct: 234 SRLQKPNITAEQR-RLLLVNMERSRWRLSDYPYLHTKYVIVNIPALSLFAVDGDKVQ-QM 291

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V+VG +  +TP+LHS   R+  NP W+IP SI+ K  +A    +  Y   ++  + +  
Sbjct: 292 KVVVGALKTKTPLLHSNFTRMDINPQWLIPMSIL-KSSVARFAGNTSYFNRHHYFIRNRS 350

Query: 278 -GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            GK V   +V        N++  Q+ G  N++      F +  + Y+HDT    +F    
Sbjct: 351 TGKVVPTNQVTSAMILSGNYVVVQEGGPYNSLGRIIFRFNNDYSIYLHDTNSRGVFQKED 410

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPT-WSRYHIEEVV-------KTRKTTPVKLATEVPV 388
           R  + GCVRV N  DL V++L +  +   R      V       K +    +K+  ++PV
Sbjct: 411 RCLSHGCVRVENPFDLAVFMLDNNKSVIGRIKYSMTVDSVTGPDKNKLIHSMKVMQDIPV 470

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNV 415
             VY + +  +   ++   D+YG D +
Sbjct: 471 FIVYYTLYPNRQGELEQYQDVYGYDQI 497


>gi|299140698|ref|ZP_07033836.1| periplasmic protein [Prevotella oris C735]
 gi|298577664|gb|EFI49532.1| periplasmic protein [Prevotella oris C735]
          Length = 472

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 31/251 (12%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YVLVNIP+  L AV NG+  L   +  G  + +TP+L SRI R+  NP WVIPRSI +K
Sbjct: 213 KYVLVNIPSFHLRAV-NGREVLEMKIGCGTTETKTPLLTSRIMRMDINPQWVIPRSITEK 271

Query: 254 DMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           ++      D QY   +   + D K G++V  + +  +     +++  Q  G  N++    
Sbjct: 272 NIANHF-GDRQYFDSHRYFVRDRKTGQKVPFDRITQDMFHSKDYLVIQKGGIGNSLGRII 330

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT--PTWSRYHI-- 368
             F +  + ++HDT    +F+   R  + GC+RV    DL V+LLKD       + H   
Sbjct: 331 FRFNNSFSVFLHDTNRHNVFSQENRGVSHGCIRVERPFDLAVFLLKDKNESLIRKLHYSM 390

Query: 369 -------------EEVVKTRKTTP-----------VKLATEVPVHFVYISAWSPKDSIIQ 404
                        EE    +K  P           +K+  ++P+   Y + +   +  +Q
Sbjct: 391 TAEIGGESTVLPEEEKKMIKKQKPDTLQRSMLISSLKVEPQIPIFITYFTIYPDVNGKLQ 450

Query: 405 FRDDIYGLDNV 415
           +  D+YG D V
Sbjct: 451 YFSDVYGYDKV 461


>gi|149275869|ref|ZP_01882014.1| hypothetical protein PBAL39_21400 [Pedobacter sp. BAL39]
 gi|149233297|gb|EDM38671.1| hypothetical protein PBAL39_21400 [Pedobacter sp. BAL39]
          Length = 532

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 131/304 (43%), Gaps = 53/304 (17%)

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           + L+A  +      R + +N+ R++  L   MG  YV VNIP  SL             V
Sbjct: 221 AALKAGGLGSSASARTILINMERLRWKLPD-MGNEYVEVNIPDFSLTWFNKQDTVSHMKV 279

Query: 220 IVGRV-----------------------DRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            VG                         + +TPIL+S++N I  NP W IP SI + ++ 
Sbjct: 280 CVGGAREANYKEKIATYLKTKSLDDKPKNHETPILYSKLNSIQVNPIWNIPVSIARSEIY 339

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNS--PEPPNFIFRQDPGKINAMASTKI 313
            + R+DP YL +NNI+ +  KGK V   + + WN    E   F F+Q  G  NA+   K 
Sbjct: 340 WMARKDPFYLSNNNIN-VYYKGKLVNDPDTIQWNKYPREKLPFQFKQGSGGGNALGKFKF 398

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE---- 369
            F + ++ Y+HDT     F    R  + GCVRV   ++    L+     + +  +E    
Sbjct: 399 IFDNGSSIYLHDTNNKTAFGRANRAISHGCVRVERPLEFAEKLVGSKYQYDQLRMEVNLP 458

Query: 370 ------------------EVVKTRKTTPVKLATEVPVHFV--YISAWSPKDSIIQFRDDI 409
                             + +   +  P    T+ PV  +  Y++AWS ++  I+FR D+
Sbjct: 459 PLDTTKMNVYRKKLAQKADTLNAFQLKPKWFGTKKPVPLIINYVTAWS-QNGKIEFRPDV 517

Query: 410 YGLD 413
           Y LD
Sbjct: 518 YRLD 521


>gi|315608208|ref|ZP_07883200.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315250177|gb|EFU30174.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 514

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 32/248 (12%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YVLVNIP+  L AV+   V L   V  G  + +TP+L+S+I R+  NP W+IPRSI++K
Sbjct: 264 KYVLVNIPSFKLCAVDGDSV-LEMRVGCGTFETKTPLLYSQIKRMDINPQWIIPRSIVKK 322

Query: 254 DMMALLRQDPQYLKD-----NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            ++  +  D  Y +       NIH     G+E+ +++      E   F   Q  GK N++
Sbjct: 323 SIIKHV-GDKNYFESRGYLIKNIHT----GEEIDLDKASLGMLENREFAVIQRGGKGNSL 377

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                 F +  + Y+HDTP    F+   R  + GC+RV+   +L  ++L +        I
Sbjct: 378 GRIVFRFDNDFSVYLHDTPSRDFFSREDRGVSHGCIRVQKPFELAKFILGNANDELIRKI 437

Query: 369 EEVVKT---------RKTTPVK------------LATEVPVHFVYISAWSPKDSIIQFRD 407
              ++           K+ P+             +  +VP+  +Y + +  K+ ++ F D
Sbjct: 438 AYSIQADISIHRDDKNKSLPIDTLNRKLLIRTCYVKPKVPLFIIYFTIYPDKNGVLTFYD 497

Query: 408 DIYGLDNV 415
           D+YG D V
Sbjct: 498 DVYGYDQV 505


>gi|288925831|ref|ZP_06419762.1| putative periplasmic protein [Prevotella buccae D17]
 gi|288337486|gb|EFC75841.1| putative periplasmic protein [Prevotella buccae D17]
          Length = 505

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 32/248 (12%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YVLVNIP+  L AV+   V L   V  G  + +TP+L+S+I R+  NP W+IPRSI++K
Sbjct: 255 KYVLVNIPSFKLCAVDGDSV-LEMRVGCGTFETKTPLLYSQIKRMDINPQWIIPRSIVKK 313

Query: 254 DMMALLRQDPQYLKD-----NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            ++  +  D  Y +       NIH     G+E+ +++      E   F   Q  GK N++
Sbjct: 314 SIIKHV-GDKNYFESRGYLIKNIHT----GEEIDLDKASLGMLENREFAVIQRGGKGNSL 368

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                 F +  + Y+HDTP    F+   R  + GC+RV+   +L  ++L +        I
Sbjct: 369 GRIVFRFDNDFSVYLHDTPSRDFFSREDRGVSHGCIRVQKPFELAKFILGNANDELIRKI 428

Query: 369 EEVVKT---------RKTTPVK------------LATEVPVHFVYISAWSPKDSIIQFRD 407
              ++           K+ P+             +  +VP+  +Y + +  K+ ++ F D
Sbjct: 429 AYSIQADISIHRDDKNKSLPIDTLNRKLLIRTCYVMPKVPLFIIYFTIYPDKNGVLTFYD 488

Query: 408 DIYGLDNV 415
           D+YG D V
Sbjct: 489 DVYGYDQV 496


>gi|323136049|ref|ZP_08071132.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322399140|gb|EFY01659.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 537

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 132/321 (41%), Gaps = 54/321 (16%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP------- 153
           P H G      Q+LRE+L    +L   +   +A    V SA +  Q      P       
Sbjct: 248 PPHYG-----YQQLREKLA---ELHSQRAAGLAGAERVASAEEGLQTDADPPPLKSRKRR 299

Query: 154 ---SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
              +G   +S LEA          ++  N+ R +  L + +G   + VNIP   L  V  
Sbjct: 300 AASAGGGSTSALEA----------EIVANMERWR-WLPRDLGDERIEVNIPDFELAVVRG 348

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G V  R+ VIVG+    TPI    +  I+ NP W +P+SIIQK+    +    Q    N 
Sbjct: 349 GMVTHRTRVIVGKEQTPTPIFSDEMVEIIVNPSWYVPQSIIQKEWHGGVGAGYQVSYRNG 408

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
                                     + RQ PG+ NA+   K  F +    YMHDTP   
Sbjct: 409 ------------------------QMVVRQPPGEKNALGRIKFVFPNDFAVYMHDTPSRG 444

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LF    R  + GC+RV +   L   +L     WS   +++++   +   + L+  +PVH 
Sbjct: 445 LFAASHRAFSHGCMRVDDPFALAGAVLGPGSGWSEARVKKLIGPSERY-INLSKPLPVHI 503

Query: 391 VYISAWSPKDSIIQFRDDIYG 411
            Y +A+  +   +  R D+YG
Sbjct: 504 QYFTAYVDEGGRLVQRPDLYG 524


>gi|240142210|ref|YP_002966720.1| hypothetical protein MexAM1_META2p0532 [Methylobacterium extorquens
           AM1]
 gi|240012154|gb|ACS43379.1| Hypothetical protein MexAM1_META2p0532 [Methylobacterium extorquens
           AM1]
          Length = 290

 Score = 96.3 bits (238), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 8/221 (3%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ- 252
           R V+VN+    L A  +G+  L S V+VGR    TP L + +  +  NP W +P +I++ 
Sbjct: 66  RLVVVNVAGRFLAAYRDGEPELESRVVVGRDGWHTPDLATSVASVTLNPTWTVPETILRD 125

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           +     L  DP + + N   ++   G+ V  + V   + E       Q PG  NA+   K
Sbjct: 126 EGWRGELASDPGWAERNGFDVL-LGGRRVAADRV--GTAELLKATLVQRPGADNALGRMK 182

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
           I   +  + Y+HDT EP  F++     + GCVRV   ++L  W+L      S   + ++V
Sbjct: 183 IAMRNAGSIYLHDTNEPGGFDDPGHSGSHGCVRVELALELATWVLGA----SGPEVADLV 238

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               T        VPV F Y +AW      + +  DIY  D
Sbjct: 239 LGGSTIVRTTPEPVPVVFGYFTAWPDAVGRVAYYPDIYRRD 279


>gi|284038422|ref|YP_003388352.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
 gi|283817715|gb|ADB39553.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
          Length = 378

 Score = 96.3 bits (238), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 14/251 (5%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP 229
           L I Q+Q  L    + L +    + ++VNIP+A+L  ++  GK  L S V+VG+ D  TP
Sbjct: 126 LTIEQVQETL-NTYRWLNRFRNSKRIVVNIPSATLRVIDRQGKTLLNSRVVVGKADTPTP 184

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY-LKDNNIHMIDEKGKEVFVEEVDW 288
           +  + I  ++  PYW +PRSI+ K+M+  ++++P   L   N+ +ID KG+ V  + V+W
Sbjct: 185 LFTAFIPSLVMYPYWNVPRSIMVKEMLPRIQKNPALVLSFLNLDVIDAKGQVVDPKTVNW 244

Query: 289 --------NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                   N   P  +  RQ  G  NA+   K    S  + Y+HDT     F +  R  +
Sbjct: 245 SVSASAVYNGSFP--YRLRQATGCANALGVLKFNVNSPYDVYLHDTNARHAFASENRQLS 302

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
            GC+RV    +L   LL  T  +S  ++    K      V+L   VPV   Y        
Sbjct: 303 HGCIRVEKPAELANLLLGYT-RFSDDYLTSCPKNASPKTVQLPVSVPVITTYNVLDIDAA 361

Query: 401 SIIQFRDDIYG 411
             IQ   D+YG
Sbjct: 362 GAIQVYPDVYG 372


>gi|281425838|ref|ZP_06256751.1| putative cell wall degradation protein [Prevotella oris F0302]
 gi|281400099|gb|EFB30930.1| putative cell wall degradation protein [Prevotella oris F0302]
          Length = 472

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 31/251 (12%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YVLVNIP+  L AV NG+  L   +  G  + +TP+L SRI R+  NP WVIPRSI +K
Sbjct: 213 KYVLVNIPSFHLRAV-NGREVLEMKIGCGTTETKTPLLTSRIMRMDINPQWVIPRSITEK 271

Query: 254 DMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           ++      D QY   +   + D K G++V  + +  +     +++  Q  G  N++    
Sbjct: 272 NIANHF-GDRQYFDSHRYFVRDRKTGQKVPFDRITQDMFHSKDYLVIQKGGIGNSLGRII 330

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT--PTWSRYHI-- 368
             F +  + ++HDT    +F+   R  + GC+RV    +L V+LLKD       + H   
Sbjct: 331 FRFNNSFSVFLHDTNRHNVFSQENRRVSHGCIRVERPFELAVFLLKDKNESLIRKLHYSM 390

Query: 369 -------------EEVVKTRKTTP-----------VKLATEVPVHFVYISAWSPKDSIIQ 404
                        EE    +K  P           +K+  ++P+   Y + +   +  +Q
Sbjct: 391 TAEIGGESTVLPEEEKKMIKKQKPDTLQRSMLISSLKVEPQIPIFITYFTIYPDVNGKLQ 450

Query: 405 FRDDIYGLDNV 415
           +  D+YG D V
Sbjct: 451 YFSDVYGYDKV 461


>gi|307946680|ref|ZP_07662015.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307770344|gb|EFO29570.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 429

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 9/207 (4%)

Query: 85  YQDILSRGGWPELP----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           Y++  + GG+  +P    ++P  +      V  L+ERL+    L   +     ++  +  
Sbjct: 208 YREKAANGGFTSIPKGEVLKPEMI---DPRVPTLKERLVQEDFLLAEQHSGSTYNGALVE 264

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ  HGL+  G++  STLEA+NV ++ R+ Q+++N+ R ++ +   +G  YV VN+
Sbjct: 265 AVKNFQSYHGLEVDGIIGKSTLEALNVSINDRLIQMELNMER-RRWMPDNLGDTYVFVNL 323

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
              +L+ V NGK    + VIVG+    TP+    +  +  NPYW +P SI  ++ +  L+
Sbjct: 324 ADQALKVVRNGKTWHTTPVIVGKPYHATPVFSDVMTYVEVNPYWNVPYSISTREYLPKLQ 383

Query: 261 QDPQYLKDNNIHMIDE-KGKEVFVEEV 286
            +   L +     I E KG  VF  ++
Sbjct: 384 ANANALSEKKHAGISERKGSCVFKRQL 410


>gi|260642730|ref|ZP_05859514.1| putative periplasmic protein [Bacteroides finegoldii DSM 17565]
 gi|260620827|gb|EEX43698.1| putative periplasmic protein [Bacteroides finegoldii DSM 17565]
          Length = 512

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 19/258 (7%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHS 233
           +L +NL R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L S
Sbjct: 241 RLLLNLERARWQYALDKGKKYVVANVAAFMLQAVNEETDSILEMRICVGSVRNKTPLLSS 300

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           RI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W     
Sbjct: 301 RIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGTQVDPHSIKWAKYAG 360

Query: 294 PN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  +QD    N++      F +  + Y+HDTP    F    R  + GCVR++  +D
Sbjct: 361 KGVPYTVKQDNKTGNSLGRIIFRFPNPYSVYLHDTPSRWAFMRKNRAVSHGCVRLQKALD 420

Query: 352 LDVWLLKDTPTWSRYHI------EEVVKTRKTTPVKLATE----------VPVHFVYISA 395
              +LL++        I      + + +  K  P+  A            VP+   Y + 
Sbjct: 421 FAFFLLEEPDELLEDRIRIAMDLKPISEEGKKLPISAAYRELKHYSLEKYVPLFIDYQTV 480

Query: 396 WSPKDSIIQFRDDIYGLD 413
           +   D+ + + DDIY  D
Sbjct: 481 YLSADNNLMYCDDIYKYD 498


>gi|282877810|ref|ZP_06286623.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
 gi|281300126|gb|EFA92482.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
          Length = 361

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 34/273 (12%)

Query: 174 RQLQVNLMRIKKLLEQKMGL--RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R++  NL R +  L+ + G   +Y L+N+P+  L A ++ K  L   + +G +D +TP++
Sbjct: 82  RKVICNLERARWRLDDEPGKHEKYALINLPSMHLMARDHDKT-LSMRIGIGALDTKTPLI 140

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWN 289
            SRI R+  NP WV+PRSII+K ++        +  D   + I E+  GK + V +V  +
Sbjct: 141 TSRIVRMDVNPQWVMPRSIIEKSVVPQAGNKDYF--DARRYFIRERKTGKRMDVTQVSAD 198

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
             +  N+   Q+ GK NAM      F ++   Y+HDT    +F    R  + GC+R+   
Sbjct: 199 MLKSGNYFVIQEGGKGNAMGRIVFRFKNKFAIYLHDTSSKGVFEREDRGVSHGCIRLEKP 258

Query: 350 IDLDVWLLKDTPTWS----RYHIE-----------------------EVVKTRKTTPVKL 382
            D  V+LL D    +    RY +E                       ++ + +    V++
Sbjct: 259 FDFAVFLLNDKDEKTIERIRYSMEADIHSTYMDDNPSSDKKPSMETNKLDRAKLIKSVQV 318

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              VP+   Y + +  +++++    D+YG D+V
Sbjct: 319 KPTVPLFITYYTLYPNENNVMTEYPDVYGFDSV 351


>gi|255533072|ref|YP_003093444.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
 gi|255346056|gb|ACU05382.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
          Length = 512

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 126/290 (43%), Gaps = 51/290 (17%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-------- 224
            + + VN+ R++  L   +G  +V VNIP  +L             V VG          
Sbjct: 214 FKTVMVNMERLRWKLPD-LGEEHVEVNIPDFTLTWFSGQDTLSHMKVCVGGAREKDYAEK 272

Query: 225 ---------------DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
                          + +TPIL+S++N I  NP W IP SI + ++     +DP YL +N
Sbjct: 273 IKLYLKSGNLDDKPKNHETPILYSKLNSIQVNPIWNIPVSIARSEIYWQAIRDPYYLSNN 332

Query: 270 NIHMIDEKGKEVFVEEVDWNS--PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
           NI +  +       + + WN    E   F F+Q  G+ NA+   K  F + ++ Y+HDT 
Sbjct: 333 NIKVYYKGQLVTDPDTIQWNKYPREKLPFQFKQGSGEGNALGKFKFIFDNGSSIYLHDTN 392

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL----- 382
               F    R  + GCVRV   ++    L+KD   + +  +E  +    TT ++L     
Sbjct: 393 NKSAFARNNRAISHGCVRVEKPLEFAEMLVKDKYQYDQLRMEVNLPPVDTTKMELYRKKL 452

Query: 383 -----------------ATEVPVHFV--YISAWSPKDSIIQFRDDIYGLD 413
                             T+ PV  +  YI+AWS ++  IQFR D+YGLD
Sbjct: 453 AKKADTLNIFQLKPKWFGTKKPVPLIINYITAWS-QNGTIQFRPDVYGLD 501


>gi|294674104|ref|YP_003574720.1| lipoprotein [Prevotella ruminicola 23]
 gi|294472724|gb|ADE82113.1| putative lipoprotein [Prevotella ruminicola 23]
          Length = 496

 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 141/321 (43%), Gaps = 34/321 (10%)

Query: 123 DLDPS-KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR-QLQVNL 180
           D DP+    SVA     ES    F +     P   +  + L  M+   +   R QL VN+
Sbjct: 167 DYDPALPDTSVAAKKMTESDRLAFLVSSA--PDTYIYKALLREMDKTTNADKRHQLAVNM 224

Query: 181 MRIKKLLEQKMGL-RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
            R +  +E    + R +LVNIPA  L A++   V L   +  G V  +TP+LHS I+ + 
Sbjct: 225 ERCRWQIEHPKDVKRQILVNIPAQQLWAIDVDSV-LDMRICCGAVPTKTPLLHSAISYMQ 283

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSPEPPNFIF 298
            NP WVIP++I++ +++     D  Y   N   +ID E G  + V  V  N+        
Sbjct: 284 VNPEWVIPQNIVKTEVVHHA-GDSAYFARNRYSVIDKESGDTLNVASVGANALLSGKLRI 342

Query: 299 RQDPGKINAMASTKIEFYSRNN--TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
            Q  G  N++   +I F S+N+   Y+HDT     F    R  + GCVRV+   +L  +L
Sbjct: 343 SQKGGVGNSLG--RIVFRSQNDFSIYLHDTNNRSAFQRDRRTLSHGCVRVQKPFELASFL 400

Query: 357 LKDTPTWS---------------------RYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
           L D   W+                       H +     R  +   +   VP++ +Y + 
Sbjct: 401 LSDVDEWTLESLRISMDIPPVTDRGREWLHKHADAPHPYRLISYHAVKPHVPLYILYYTT 460

Query: 396 W-SPKDSIIQFRDDIYGLDNV 415
           + +PK   I +  D+YG D V
Sbjct: 461 FPNPKTGAIDYWPDLYGFDKV 481


>gi|282879885|ref|ZP_06288612.1| conserved domain protein [Prevotella timonensis CRIS 5C-B1]
 gi|281306279|gb|EFA98312.1| conserved domain protein [Prevotella timonensis CRIS 5C-B1]
          Length = 491

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 27/247 (10%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YV+VNIPA  L A+++ +V +R  V VG    +TP+L SRI R+  NP WV+P+SII K
Sbjct: 237 KYVMVNIPAMELLAIDHEQV-MRMRVGVGTNTTKTPLLSSRIMRMDVNPQWVMPKSIIDK 295

Query: 254 DMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
            + A    D  Y +++   + + E G  V   +V         +   Q+ GK NAM    
Sbjct: 296 SV-ARHAGDSAYFENHRYFIRNRETGNRVDPRQVTSEMLRSGQYFVIQEGGKGNAMGRIV 354

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP----TWSRY-- 366
             F +    Y+HDT    +F+   R  + GCVRV    +L V+LLKD         RY  
Sbjct: 355 FRFKNNFAVYLHDTSSRGVFDQSNRGVSHGCVRVEKPFELAVFLLKDKDEELIEKMRYSM 414

Query: 367 ------HIEEVVKTRKTTP------------VKLATEVPVHFVYISAWSPKDSIIQFRDD 408
                 H ++ +      P            V++   VP++  Y + +  +   ++   D
Sbjct: 415 QADIHSHYQKKLTATSNLPNDTLQESKLINSVRVQPAVPLYITYYTLYPNEQHGMREYQD 474

Query: 409 IYGLDNV 415
           IYG D V
Sbjct: 475 IYGFDAV 481


>gi|148553414|ref|YP_001260996.1| hypothetical protein Swit_0490 [Sphingomonas wittichii RW1]
 gi|148498604|gb|ABQ66858.1| Uncharacterized protein [Sphingomonas wittichii RW1]
          Length = 572

 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 21/249 (8%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           +++L++NL R + L       R+V+V+  +A L   E GK      V+VG  + +TP+L 
Sbjct: 338 VQRLRLNLDRARLL--PGPWTRHVVVDAASARLWYYEGGKQRAMMRVVVGAPETETPMLA 395

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMA--LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
             +   + NPYW +P  +IQ+ +    +    P  L+   +       + +  +EVDW +
Sbjct: 396 GMVRYAVLNPYWNVPDYLIQRRLAPKIVAGATPASLRMEVLSDWSASPRRLAGDEVDWPA 455

Query: 291 PEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                 +   RQ PG+ NAM   K  F +    Y+HDTP+  L +   R  ++GC+R   
Sbjct: 456 VAAGRKLVRMRQLPGRDNAMGRVKFIFPNDLGIYLHDTPDKGLLSKADRHLSNGCIR--- 512

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP---VKLATEVPVHFVYISAWSPKDSIIQF 405
                   L+D P   R      +      P   V L   +PV+  YI+A +P +  I F
Sbjct: 513 --------LQDAPGLYRLMFGRPLPAASKQPERDVALPAPIPVYLTYITA-TPTERGIGF 563

Query: 406 RDDIYGLDN 414
             D+YG D 
Sbjct: 564 LKDVYGRDE 572


>gi|260912258|ref|ZP_05918809.1| peptidoglycan binding protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260633559|gb|EEX51698.1| peptidoglycan binding protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 549

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 19/240 (7%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YVLVN+P+  L+A+E   V L   +  G +D +TP+L+S I R+  NP W+IPRSII+K
Sbjct: 301 KYVLVNVPSFHLDAIEGDSV-LTMRMACGTLDTKTPLLNSHIMRMDVNPQWIIPRSIIKK 359

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +++A       + +     +    G+ V    V       P++   Q+ G+ N++     
Sbjct: 360 EVIAHAGNTDYFDRHRYFILNRSTGRRVDPCSVSAGMLLTPDYFVVQEGGEGNSLGRIVF 419

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD-------------- 359
            F +  + ++HDT     F    R  + GC+RV+   +L V+LLKD              
Sbjct: 420 RFNNNFSIFIHDTSSKWAFERGNRGVSHGCIRVQKPFELAVFLLKDKDKSLIDKITYSMQ 479

Query: 360 ----TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
                P         V   R    VK+   VP+   Y + +      IQ   D+YG D V
Sbjct: 480 ADLSKPKDGEEPKPRVDYRRLVNSVKVNPNVPLFITYYTLYPDMAGRIQTYADVYGYDQV 539


>gi|197105408|ref|YP_002130785.1| hypothetical protein PHZ_c1945 [Phenylobacterium zucineum HLK1]
 gi|196478828|gb|ACG78356.1| hypothetical protein PHZ_c1945 [Phenylobacterium zucineum HLK1]
          Length = 483

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 16/248 (6%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           R +  N+ R + L  + +G R++LVN  +A L   E+G+   R  VIVGR    TP +  
Sbjct: 231 RLILANMDRARGL-PRALGPRFILVNAASAELRVYEDGEEVDRMPVIVGRPSAATPPMAG 289

Query: 234 RINRIMFNPYWVIPRSIIQKDMMA-LLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWN 289
            I    F PYW +P  +++++    +LR+ P +L       + +   +  V    E+DW 
Sbjct: 290 VIRYARFRPYWNLPEGMVREEFAPRVLREGPGFLAAAGFEALSDWSPQARVLDPAEIDWR 349

Query: 290 --SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
             +    +   RQ PG  N + + K+   +    Y+HDTP+   F    R  ++GC+R+ 
Sbjct: 350 AVARGERSLRLRQSPGPGNILGNVKLMLPNHLGIYLHDTPDKASFRRSRRTLSAGCIRLA 409

Query: 348 NIIDLDVWLLKDTPTWSR-YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
           +   L   LL+    W       E +  R    V L   VPV+ +Y++A   +   +   
Sbjct: 410 DADRLTRRLLE----WEEGERPPEGLNQR----VDLPRGVPVYILYLTAERGEGGEVLRH 461

Query: 407 DDIYGLDN 414
            D+YG D+
Sbjct: 462 PDLYGRDS 469


>gi|323345681|ref|ZP_08085904.1| cell wall degradation protein [Prevotella oralis ATCC 33269]
 gi|323093795|gb|EFZ36373.1| cell wall degradation protein [Prevotella oralis ATCC 33269]
          Length = 507

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 125/278 (44%), Gaps = 36/278 (12%)

Query: 172 RIRQLQVNLMRIKKLLEQKMGL-----------RYVLVNIPAASLEAVENGKVGLRSTVI 220
           R++Q      RIK L   +              +YVLVNIP+  L AV+   V L   + 
Sbjct: 222 RLKQCSTQTERIKMLCNMERCRWRLYDYPWRHRKYVLVNIPSFHLRAVDQDSV-LEMKIG 280

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-K 279
            G ++ +TP+L SRI R+  NP WVIPRSI++K + A    D  Y   +  ++ + K  K
Sbjct: 281 CGSLETKTPLLTSRIMRMDLNPQWVIPRSIVRKSI-ANHAGDSAYFASHRYYVRERKTIK 339

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            + V  V  +     ++   Q+ G+ NA+      F +  + ++H T  P +F    R  
Sbjct: 340 RIPVSLVSRSMLNSSDYFVIQEGGEGNALGRIIFRFNNNFSVFLHYTSAPGVFEQSSRDV 399

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWS----RYHIE------------------EVVKTRKT 377
           + GCVRV   +DL V+LLK+         RY +                    V K++  
Sbjct: 400 SHGCVRVEKPLDLAVFLLKNKDEKIIEKIRYSMTVDLGNQRDKGQRGVEFRPPVDKSKLI 459

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             +K+  EVP+   Y + +  +   ++   D+YG D V
Sbjct: 460 GSLKVEPEVPLFITYYTLYPDRYGQLEEFPDVYGYDRV 497


>gi|288928347|ref|ZP_06422194.1| lipoprotein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331181|gb|EFC69765.1| lipoprotein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 460

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 21/241 (8%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YVLVN+P+  L+A+E   V L   +  G +D +TP+L+S I R+  NP W+IPRSII+K
Sbjct: 212 KYVLVNVPSYHLDAIEGDSV-LTMRMACGTLDTKTPLLNSHIMRMDVNPQWIIPRSIIKK 270

Query: 254 DMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           +++     +P Y + +   +++   G+ V    V       P++   Q+ G+ N++    
Sbjct: 271 EVVGHA-GNPDYFERHRYFILNRPSGRRVDPANVSAGMLLNPDYFVIQEGGEGNSLGRVV 329

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL--KD----------- 359
             F +  + ++HDT     F+   R  + GC+RV+   +L V+LL  KD           
Sbjct: 330 FRFNNNFSIFIHDTSSKWAFDRGSRSVSHGCIRVQKPFELAVFLLGKKDKTLIDKINYSM 389

Query: 360 -----TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 P         V   R    VK+   VP+   Y + +      +    D+YG D 
Sbjct: 390 QADLSKPKEGEEKRTRVDYRRLVNSVKVNPNVPLFITYYTLYPDVKGKMHTYADVYGYDK 449

Query: 415 V 415
           V
Sbjct: 450 V 450


>gi|332880541|ref|ZP_08448215.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332681529|gb|EGJ54452.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 508

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 85/166 (51%), Gaps = 2/166 (1%)

Query: 194 RYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +YV VN+ AA+L AV EN    L   + +G    +TP+L SRI R+  NPYW IP SI++
Sbjct: 261 KYVWVNLAAATLYAVDENKPEYLDMKICIGSPKNKTPMLQSRIERVDMNPYWNIPYSIVK 320

Query: 253 KDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
           K++      D  Y   N   + + E G+E+    V  +      +  RQD G+ N++   
Sbjct: 321 KEIAPRHAGDEAYFSRNRYRIFNKETGEELPPAAVTSDMLTSGRYRVRQDNGEGNSLGRL 380

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
              F +  + Y+HDT     F    R  + GC+R+   ++L V+LL
Sbjct: 381 IFRFPNNFSIYLHDTNNRQAFKRTNRAISHGCIRIEKPLELAVFLL 426


>gi|317502835|ref|ZP_07960937.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315666050|gb|EFV05615.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 509

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 31/251 (12%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YVLVNIP+  L  V    V     +  G  D +TP+L SRI R+  NP W++PRSII+K
Sbjct: 250 KYVLVNIPSFHLRMVNRDDV-REMKIGCGSKDTKTPLLTSRIIRMDVNPQWIVPRSIIKK 308

Query: 254 DMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
            ++     D  Y   ++  +   K GK++  +++        +++  Q  G  N++    
Sbjct: 309 SIVNHC-GDRHYFDSHHFFVRHRKTGKKIPFDQITREMLLSKDYLVIQTGGLGNSLGRII 367

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW--SRYHI-- 368
             F +  + ++HDT +  +F+   R  + GCVRV    DL V+LLKD       + H   
Sbjct: 368 FRFPNGFSVFLHDTNQQNIFSQTDRDVSHGCVRVERPFDLAVFLLKDKEASIIRKLHYSM 427

Query: 369 -------------EEVVKTRKTTPVKLAT-----------EVPVHFVYISAWSPKDSIIQ 404
                        EE     KT P  L             +VP++  Y + +      +Q
Sbjct: 428 TAKIGEEGVNSSEEEHKNMEKTRPDTLKKSLILRSLSVEPQVPIYLTYFTIYPDGKGKLQ 487

Query: 405 FRDDIYGLDNV 415
              D+YG D V
Sbjct: 488 HFADVYGFDKV 498


>gi|330996788|ref|ZP_08320660.1| conserved domain protein [Paraprevotella xylaniphila YIT 11841]
 gi|329572510|gb|EGG54161.1| conserved domain protein [Paraprevotella xylaniphila YIT 11841]
          Length = 508

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 3/190 (1%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG-LRSTVIVGRVDRQTPILH 232
           R+  +N+ R +    +    +YV VN+ AA L AV+  K   L   + +G    +TP+L 
Sbjct: 241 RKAIINIERSRWRTPRAAHDKYVWVNLAAAKLYAVDEKKPEYLDMKICIGSPKSKTPMLQ 300

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSP 291
           SRI R+  NPYW IP SI++K++      +  Y   N   +   E G+E+    V  +  
Sbjct: 301 SRIERVDMNPYWNIPYSIVKKEIAPRHAGNEAYFSRNRYRIFSKETGEELPPAAVTADML 360

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQD G+ N++      F +  + Y+HDT     F    R  + GC+R+   ++
Sbjct: 361 TSGRYRVRQDNGEGNSLGRLIFRFPNNFSIYLHDTNNKQAFKRTNRAISHGCIRIEKPLE 420

Query: 352 LDVWLLKDTP 361
           L V+LL DTP
Sbjct: 421 LAVFLL-DTP 429


>gi|288801197|ref|ZP_06406652.1| peptidoglycan-binding domain 1 [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288331808|gb|EFC70291.1| peptidoglycan-binding domain 1 [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 460

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 26/245 (10%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YVLVN+P+  L+AV+   V     V  G +  +TP+L+S I R+  NP W+IP SI++K
Sbjct: 209 KYVLVNVPSFYLQAVDEDSV-FSMRVACGALSTKTPLLNSTIERMDINPQWIIPLSIVKK 267

Query: 254 DMMALLRQDPQYLKDNNIHMIDE--KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
            +++ L    ++  D++ + I     GKE+ + EV  +      +   Q  G+ NA+   
Sbjct: 268 QIISQLGN--RHYFDSHSYFIRHVATGKEIDISEVTPDMLLSGAYKVVQRGGEGNALGRI 325

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT----------- 360
              F +  + Y+HDT     F+   R  + GC+RV   ++L ++LL+D            
Sbjct: 326 VFRFPNNFSVYLHDTSSREAFSRFDRGVSHGCIRVEKPLELAIFLLQDKEEALIDKLIYS 385

Query: 361 -----PTWSRYHIEEVV-----KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
                 T SR + ++ +     + R      L   VP+   Y + +  +  +++   D+Y
Sbjct: 386 TTVDMKTDSRNNEKDCLENKIDRKRLINSKSLKPSVPLFITYYTLYPDEKGVMRDYPDVY 445

Query: 411 GLDNV 415
           G D V
Sbjct: 446 GYDKV 450


>gi|281422421|ref|ZP_06253420.1| putative cell wall degradation protein [Prevotella copri DSM 18205]
 gi|281403484|gb|EFB34164.1| putative cell wall degradation protein [Prevotella copri DSM 18205]
          Length = 451

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 10/230 (4%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YV+VNIP+  L A+++    L   +  G    +TPIL+S I R+  NP W +PRSI+  
Sbjct: 215 KYVVVNIPSFHLLAIDHQDT-LSMRIGCGASKTKTPILNSHIKRMELNPQWFVPRSIVLH 273

Query: 254 DMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           DM+  +  +  Y +  N ++ +   GKEV ++ V  +      +   Q  GK NA+    
Sbjct: 274 DMIHRV-GNHGYFRARNYYVREVATGKEVDLDRVTRSMLISGAYGIAQRGGKGNALGRII 332

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI---- 368
             F +  + ++HDT    +F    R  + GC+R+    D  V+LL D     +  I    
Sbjct: 333 FRFDNNFSVFLHDTNSKGVFGQEDRGVSHGCIRIEKPYDFAVFLLADKNEKLKEKIYYSM 392

Query: 369 -EEVVKTRK--TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             + +  +K     VK+  +VP+   Y + +      I    D+YG D +
Sbjct: 393 TADSLANKKLVVNNVKVNPQVPLFITYYTLYPLAGGRIADYSDVYGFDAI 442


>gi|85709388|ref|ZP_01040453.1| hypothetical protein NAP1_10923 [Erythrobacter sp. NAP1]
 gi|85688098|gb|EAQ28102.1| hypothetical protein NAP1_10923 [Erythrobacter sp. NAP1]
          Length = 460

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 18/240 (7%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR-QTPILHSR 234
           +Q N+ R +  L + +G +Y++ N+P   L      ++      +VG+  R  TP L   
Sbjct: 203 IQANMDRWR-WLARDLGTQYLITNVPEYQLRLTVRDRIISTYRTVVGKPGRTATPQLAEM 261

Query: 235 INRIMFNPYWVIPRSIIQKDMMA-LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           +  ++FNP W +P+SI++ + +   +  +P + + N       +G   ++  V       
Sbjct: 262 VEGVVFNPTWTVPQSIVKGEGLGERVLGNPGWARANGYTAT--RGSNGWITVV------- 312

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
                 Q PG  N++   K+E  + +  + HDTP   LF N  R  + GC+R    ++L 
Sbjct: 313 ------QQPGPGNSLGRMKLEMPNPHAIFFHDTPSRHLFANANRALSHGCIRTERALELA 366

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           + +       +R    E+  + K T V +  ++P +  Y +     +  ++  DDIYG D
Sbjct: 367 ITMAILGKGATRDEAVEIATSGKYTKVMIEKQLPAYITYFTMGVDIEGELRTFDDIYGRD 426


>gi|326386118|ref|ZP_08207742.1| hypothetical protein Y88_2010 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209343|gb|EGD60136.1| hypothetical protein Y88_2010 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 505

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 26/248 (10%)

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR-QTPI 230
           +I  ++ N+ R +  L + +GL+Y+++N+P   L    N K+      IVGR  +  TP 
Sbjct: 247 QIAMIRANMDRWR-WLGRDLGLQYLIINVPEQELRLTVNNKIIRTYKAIVGRPGKTATPQ 305

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
           L  ++  ++FNP W +P+SI+  + +          KD    +I    K   +  V   S
Sbjct: 306 LAEQVKNVVFNPTWTVPQSIVVGEGLG---------KD----LIAHPAKAKRLGYVATQS 352

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            +       Q PG  NA+   K++  + +  Y+HDTP   LFN   R  + GC+R     
Sbjct: 353 AD-GTITVVQQPGNTNALGRVKLDMPNDHAIYIHDTPNRTLFNQPQRALSHGCIRAERAT 411

Query: 351 DLDVW---LLKDTP--TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           +L +    L  D P  T   Y +     + K T V +A   PV+  Y +     + +++ 
Sbjct: 412 ELAMTMAILGADLPPQTAVDYSL-----SGKYTKVPMAKPFPVYITYFTVARDVNGLMRS 466

Query: 406 RDDIYGLD 413
             D+YG D
Sbjct: 467 FPDLYGRD 474


>gi|261880240|ref|ZP_06006667.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270333074|gb|EFA43860.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 458

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 112/248 (45%), Gaps = 27/248 (10%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YVLVNIP+  L AV+  KV L   +  G    +TP++ S I R+  NP WV+P+SI++K
Sbjct: 203 KYVLVNIPSFHLRAVDGDKV-LTMRIAFGSNKNKTPLIVSAIKRMDVNPQWVMPKSIVRK 261

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
            ++  L     + ++       + G+ V V  V     E  ++   Q  G+ NAM     
Sbjct: 262 SVVPQLGNINYFTQNRYFIRNRQTGEHVDVSSVSPEMLESGDYFVIQRGGEGNAMGRIVF 321

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL--KDTPTWSRYHI--- 368
            F +  + Y+HDT    +F+  VR  + GC+RV    +L  ++L  KD     R +    
Sbjct: 322 RFDNNLSIYLHDTSSRTIFDRSVRNVSHGCIRVEKPFELSKFVLAKKDDKLVDRINYSMH 381

Query: 369 ----------EEVV-----------KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
                     EE+            ++R    V +   VP+  +Y + +      I+   
Sbjct: 382 ADVSPVNMKKEEMTERMMLVADTLDRSRLIGSVNIKPMVPIFILYYTMYPDASGKIETFS 441

Query: 408 DIYGLDNV 415
           D+YG D++
Sbjct: 442 DVYGYDSL 449


>gi|148554282|ref|YP_001261864.1| hypothetical protein Swit_1361 [Sphingomonas wittichii RW1]
 gi|148499472|gb|ABQ67726.1| Uncharacterized protein [Sphingomonas wittichii RW1]
          Length = 418

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 96/241 (39%), Gaps = 31/241 (12%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L+ NL R +  + + +G RY+ VNIP   L  + NG       V+VG     TP L   
Sbjct: 191 RLRANLERWR-WMPRDLGDRYIYVNIPGYRLSVINNGIEEASYNVVVGAPRTPTPQLELY 249

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
              I+ NP W +P SI++              +      I      V      W      
Sbjct: 250 AQSIVANPGWTVPHSIVKAGGT----------RGKGFRWIRNPDGSVSA----W------ 289

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
                Q PG  NA+   KI+  + +  Y+HDTP   +F    R  + GC+RV NI +L  
Sbjct: 290 -----QAPGPTNALGRIKIDMPNPHAIYLHDTPNRAVFARENRALSHGCIRVENIEELAA 344

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L              +    KT   +L   VPV+ VY +A +  D  ++   D YG D 
Sbjct: 345 MLQGGDGL-----DAALADPGKTKVFQLERSVPVYLVYFTAQADPDGTVRPLGDPYGRDK 399

Query: 415 V 415
            
Sbjct: 400 A 400


>gi|85374905|ref|YP_458967.1| hypothetical protein ELI_10390 [Erythrobacter litoralis HTCC2594]
 gi|84787988|gb|ABC64170.1| hypothetical protein ELI_10390 [Erythrobacter litoralis HTCC2594]
          Length = 473

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR-QTPI 230
           R + ++ N+ R +  L + +G +Y++ N+P   L    N K+      IVG+  R  TP 
Sbjct: 211 RFKLIRANMDRWR-WLPRDLGGQYLMTNVPEYQLRLTVNDKIVRTYKTIVGKPGRTATPQ 269

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMM-ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           L   +  ++ NP W +P+SI++ + + A +  +P + +         KG   +V  V   
Sbjct: 270 LAEVVEGVILNPTWTVPQSIVKGEGLGAKVLNNPGWARAKGYKAT--KGANGWVTVV--- 324

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                     Q PG  N++   K++  +R+  ++HDTP   LF    R  + GC+R    
Sbjct: 325 ----------QQPGPTNSLGRMKLDMPNRHAIFLHDTPSRNLFGTSNRALSHGCIRTERA 374

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
            +L + L       +     E++ + + T V    ++PV+  Y +  +  D  +    D+
Sbjct: 375 TELALTLSILQAGLTADEGVELLNSGEYTRVGFEKKMPVYITYFTMATDIDGKLSTFKDL 434

Query: 410 YGLDNV 415
           YG D+ 
Sbjct: 435 YGRDDA 440


>gi|204789654|gb|ACI02035.1| hypothetical protein [uncultured bacterium]
          Length = 397

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 3/167 (1%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YVLVNIP+  L A++     L   +  G    +TPIL+S I R+  NP W +PRSI+ K
Sbjct: 230 KYVLVNIPSFHLYAIDEQDT-LAMKIGCGSTKTKTPILNSYIKRMDLNPKWFVPRSIMVK 288

Query: 254 DMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           DM+     +P Y    N ++ D   G+EV   +V         +   Q  GK N++    
Sbjct: 289 DMVHHA-GNPAYFNARNYYISDRSTGEEVNPAQVTRTMLLSGKYGVVQRGGKGNSLGRII 347

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
             F +  + Y+HDT    +F+   R  + GC+RV    +L  +LL +
Sbjct: 348 FRFDNNFSVYLHDTSSQAVFSREDRDVSHGCIRVEKPFELAKFLLHE 394


>gi|149185534|ref|ZP_01863850.1| hypothetical protein ED21_20954 [Erythrobacter sp. SD-21]
 gi|148830754|gb|EDL49189.1| hypothetical protein ED21_20954 [Erythrobacter sp. SD-21]
          Length = 475

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 27/262 (10%)

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR-QTPI 230
           RI+ ++ N+ R +  L Q +G +Y++ N+P   L    NG++      IVG+  R  TP 
Sbjct: 208 RIKLIRANMDRWR-WLPQDLGRQYLVTNVPEYMLRLTVNGRIIKSYRTIVGKPGRTATPQ 266

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMA-LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           L   +  ++FNP W +P+SI+  + +   +  +P + +  N      KG   ++  V   
Sbjct: 267 LAEMVEAVIFNPTWTVPQSIVVGEGLGNKVLNNPGWAR--NAGYKATKGANGWITVV--- 321

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                     Q PG  N++   K++  + +  ++HDTP   LFN   R  + GC+RV+  
Sbjct: 322 ----------QQPGPTNSLGLMKLDMPNEHAIFLHDTPSRHLFNQDARALSHGCIRVKGA 371

Query: 350 IDLDVWL--------LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
            +L + +          D P   +  + E+  + + T  ++  + PV+  Y +  +  + 
Sbjct: 372 RELAMTMSMLGNASNRADIPA-IQEEVSEITMSGEYTRYEMKKQWPVYITYFTMATDVNG 430

Query: 402 IIQFRDDIYGLDNVHVGIIPLP 423
            ++   DIY  D   +  +  P
Sbjct: 431 EMKTFRDIYDRDKPVLAALDAP 452


>gi|296283068|ref|ZP_06861066.1| hypothetical protein CbatJ_05580 [Citromicrobium bathyomarinum
           JL354]
          Length = 468

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 18/248 (7%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR- 226
           P   R + +Q N+ R +  L + +G +Y++ N+P   L    N K+      IVG+  R 
Sbjct: 203 PGSKRYKLIQANMDRWR-WLPRDLGHQYLITNVPEYQLRLTVNDKIMRTYRTIVGKPGRT 261

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMA-LLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
            TP L   +  ++ NP W +P+SI++ + +   +  +P +           +G   ++  
Sbjct: 262 ATPQLAESVEGVILNPNWTVPQSIVKGEGLGERVLGNPSWAASKGYKAT--RGANGYISV 319

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           V             Q PG  NA+   K++  +R+  + HDTP   LF+   R  + GC+R
Sbjct: 320 V-------------QGPGPGNALGRMKLDMPNRHAIFFHDTPSRGLFSQADRALSHGCIR 366

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
                +L + L       +     E + + + T V+  +++P +  Y +  +  D  +  
Sbjct: 367 TERATELALTLAILQAGLTADEGVEKLASGEYTRVEFNSKMPAYITYFTMGTTIDGEMAT 426

Query: 406 RDDIYGLD 413
             DIY  D
Sbjct: 427 FKDIYDRD 434


>gi|46204583|ref|ZP_00209472.1| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 259

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 8/137 (5%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPI----RPLHLGNSSVSVQRLRERLIISG 122
           +P  + +T  +T +A   YQ     GGW  LP     +P   G+S  ++  LR  L ++G
Sbjct: 127 LPTFTAQTFVETMRAAERYQVYAEAGGWKTLPADFAPKP---GDSHPAIPSLRHHLTLTG 183

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  +D  + +AVK FQ RHGL  +G+    TL A+NVP ++R RQL+ +  R
Sbjct: 184 DLPADAPPSDRYDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPAEVRQRQLRASAQR 243

Query: 183 IKKLLEQKMGLRYVLVN 199
           +        G RYV VN
Sbjct: 244 LMG-SSFAFGERYVTVN 259


>gi|218458505|ref|ZP_03498596.1| hypothetical protein RetlK5_03208 [Rhizobium etli Kim 5]
          Length = 239

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 3/127 (2%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           V+ FQ   GL   G++  +T+ AM        +I +L+V  M   + L + +G RYV++N
Sbjct: 94  VEDFQKERGLKADGVIGQATVRAMTGGDTNASKIDKLEV-AMEQARWLPEDLGSRYVMIN 152

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
            PA      ++GK  L   V+VG  + QT   +  I  + FNP+W +P+SII  +M+  L
Sbjct: 153 QPAYMAYYHDDGKEQLSMRVVVGGKNNQTYFFNDEIETVEFNPFWGVPQSIIINEMLPKL 212

Query: 260 RQDPQYL 266
           R DP YL
Sbjct: 213 RSDPNYL 219


>gi|103486925|ref|YP_616486.1| hypothetical protein Sala_1440 [Sphingopyxis alaskensis RB2256]
 gi|98977002|gb|ABF53153.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
          Length = 409

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 99/240 (41%), Gaps = 17/240 (7%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           + ++VN+ R +  + + +G RYV+ N+P      V  G V      +VG+    TP L+ 
Sbjct: 143 QAIRVNMERWR-WMPRDLGERYVVSNVPEYLTRVVHGGTVIATHKAVVGKKSTPTPQLNP 201

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
               I+ NP W +PRSII + + A + ++P   +    +     GK + V          
Sbjct: 202 MATGIIVNPNWTLPRSIINEGIGATIARNPAAARAQG-YTWTGSGKTLSVV--------- 251

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
                 Q PG  NA+   K+E  + +  Y+HDTP    FN   R  + GC+R    +   
Sbjct: 252 ------QKPGPNNALGVMKMEMLNEHAIYLHDTPSKNAFNAAARAFSHGCIRTERALHFS 305

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             +       S     E + + KTT        PV+  Y +        ++   D+Y  D
Sbjct: 306 GLMAVMFAGRSPEEFGEAIASGKTTRFGFDQPFPVYVAYWTVVPDGKGGVKKLADLYERD 365


>gi|87198452|ref|YP_495709.1| hypothetical protein Saro_0427 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134133|gb|ABD24875.1| conserved hypothetical protein [Novosphingobium aromaticivorans DSM
           12444]
          Length = 499

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 104/245 (42%), Gaps = 21/245 (8%)

Query: 175 QLQVNLMRIK----KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR-QTP 229
           Q Q  L+R      + L + +G +Y+L N+P   L      K+     VIVG+  +  TP
Sbjct: 239 QKQAALIRANMDRWRWLARDLGTQYLLANVPEQVLRLTVRNKIISTYKVIVGKPGKTATP 298

Query: 230 ILHSRINRIMFNPYWVIPRSII-QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
            L   +  ++FNP W +P+SI+  + + A L  +P+  +     +       ++V     
Sbjct: 299 QLAETVEGVIFNPTWTVPQSIVVGEGLGARLVNNPRQAEREGYKVTKAGDGTIYVV---- 354

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                      Q PG  N++   K++  + +  ++HDTP   LFN   R  + GCVRV  
Sbjct: 355 -----------QQPGDNNSLGRMKLDMPNEHAIFLHDTPNRNLFNLPARALSHGCVRVER 403

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
             +L + +       +         ++  T V +    PV+  Y +     + +++   D
Sbjct: 404 ATELAMTMAILGAGMTPDDAVAAHTSKVYTKVPMTKTFPVYLTYFTVARDVNGMLRSFPD 463

Query: 409 IYGLD 413
           IY  D
Sbjct: 464 IYNRD 468


>gi|218515096|ref|ZP_03511936.1| hypothetical protein Retl8_16076 [Rhizobium etli 8C-3]
          Length = 152

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 11/139 (7%)

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           G  V    VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +R
Sbjct: 4   GHAVASSSVDWYG-STDNVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMR 62

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK---TRKTTPVKLATEVPVHFVYIS 394
             + GCVR+ N   +   +L  T       +++V K   + +   V++  ++PV+  Y +
Sbjct: 63  ALSHGCVRLSNPRAMAAAVLGTT-------VDDVAKQIASGQNHAVRVPQKIPVYVSYFT 115

Query: 395 AWSPKDSIIQFRDDIYGLD 413
           AW  K+ ++++ DD+YG D
Sbjct: 116 AWPNKEGVVEYFDDVYGRD 134


>gi|312890410|ref|ZP_07749947.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311297180|gb|EFQ74312.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 436

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 28/176 (15%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR---------- 223
           R + VNL R++    +    +YVLVNIP   L  ++NGK  L   V VG           
Sbjct: 248 RAILVNLERLR-WKNKPSESKYVLVNIPDYQLNFMDNGKSILNMKVCVGEGRNKDHSHNL 306

Query: 224 ------------VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
                         R+TP L+S I     NP W IP+SI  K+++    +DP YL + NI
Sbjct: 307 VEYDDSYQIDRPFSRETPQLNSMIYVAEVNPVWNIPQSIASKEIIVEAAKDPYYLSNKNI 366

Query: 272 HMIDEKGKEVF-VEEVDW---NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
            ++ + G+EV   E + W   +  E  ++ F+Q PG  N++   K  F +  N Y+
Sbjct: 367 -VVYKGGQEVEDPETIKWATLSENEKASYSFKQKPGDDNSLGKIKFLFKNSTNVYL 421


>gi|218508835|ref|ZP_03506713.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli Brasil 5]
          Length = 62

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 35/44 (79%)

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +V+ T   TP+KLATEVPV++VYISAW   D I+QFRDDIY +D
Sbjct: 1   QVIATGVNTPIKLATEVPVYYVYISAWGMPDGIVQFRDDIYQMD 44


>gi|289808938|ref|ZP_06539567.1| hypothetical protein Salmonellaentericaenterica_32767 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 108

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           MHDTP   LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +
Sbjct: 1   MHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNI 59

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 60  RQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 90


>gi|330860173|emb|CBX70494.1| hypothetical protein YEW_AT04130 [Yersinia enterocolitica W22703]
          Length = 132

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 5/98 (5%)

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           +IVGR  R+TP++ S +N ++ NP W +P S++++D++   R D  Y + +   ++    
Sbjct: 1   MIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKARYDSSYFQRHGYTVLSGWS 60

Query: 279 KEVFVEE---VDWNSPEPPNFIF--RQDPGKINAMAST 311
            +  V +   +DW+   P NF +  RQ PG  N++  +
Sbjct: 61  NDAEVVDPSMIDWSMISPNNFPYRLRQAPGASNSLGGS 98


>gi|307946679|ref|ZP_07662014.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307770343|gb|EFO29569.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 97

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 1/85 (1%)

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           +FN   R  + GC+RV    DL   LL     +S+  +E++   +K T +KL   + VH 
Sbjct: 1   MFNRAQRDFSHGCIRVAKPFDLGDVLL-SPEGYSKGKLEKIRDGQKRTVIKLNKPLKVHL 59

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNV 415
            Y++AW  KD    FR DIY  D V
Sbjct: 60  TYLTAWMNKDGSTHFRRDIYSRDAV 84


>gi|254501948|ref|ZP_05114099.1| hypothetical protein SADFL11_1986 [Labrenzia alexandrii DFL-11]
 gi|222438019|gb|EEE44698.1| hypothetical protein SADFL11_1986 [Labrenzia alexandrii DFL-11]
          Length = 522

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 4/203 (1%)

Query: 92  GGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GG+  L I+  L  G     V  LR R+   G +    G  + FD  +  AV   + R+ 
Sbjct: 183 GGFTYLDIQEELSPGAQGDQVPDLRRRMFEDGLVGEGTGGEL-FDKRLAFAVAQSKHRYV 241

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L  S  V    + A+N+P++ RI Q+   + RI+ +  +   ++ + +N         E+
Sbjct: 242 LPVSSEVTPRLIRALNIPIERRIEQVSNAMERIRWIPPEFSRVK-LFINKGENQFVFSES 300

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G+V +         DR      + I  + F+P W +P   +  +++  L+ DP  ++   
Sbjct: 301 GRVVMEGQAFANCPDRNHANTATAIEAVTFHPTWQVPLEFLGNELLPRLKDDPTEVEGVG 360

Query: 271 IHMIDEKGKEVFVEEVDWNSPEP 293
            ++   KG +V +  + W    P
Sbjct: 361 YYL-RRKGADVPLSSLPWGQATP 382


>gi|312890411|ref|ZP_07749948.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311297181|gb|EFQ74313.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 91

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%)

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
           +R  + GCVR+   +D    L  D+  +       V    + T + L  +VPV+  Y + 
Sbjct: 1   MRAVSHGCVRLEKPLDFAHALFGDSAKYKTIEKCIVEDNPEPTSLSLNNKVPVYITYFTC 60

Query: 396 WSPKDSIIQFRDDIYGLDNV 415
           WS     +QFR DIYGLD V
Sbjct: 61  WSDDSGTLQFRKDIYGLDIV 80


>gi|262361435|gb|ACY58156.1| hypothetical protein YPD4_1248 [Yersinia pestis D106004]
          Length = 412

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L         ++VNI
Sbjct: 326 AVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGHVDN--GIMVNI 383

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           P  SL   ++G   L S VIVGR  R+TP
Sbjct: 384 PNYSLNYYKDGAEVLSSRVIVGRPSRKTP 412


>gi|261404540|ref|YP_003240781.1| peptidoglycan-binding domain 1 protein [Paenibacillus sp. Y412MC10]
 gi|261281003|gb|ACX62974.1| Peptidoglycan-binding domain 1 protein [Paenibacillus sp. Y412MC10]
          Length = 159

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           GWP      L  G+S   V+ L+  L  SG       +  +F A V SAVK FQ R GL 
Sbjct: 36  GWP-----TLRQGSSGGYVRALQSNLWASGYQSTVGSIDGSFGAGVTSAVKAFQSREGLT 90

Query: 153 PSGMVDSSTLEAMN 166
             G+V S +  AMN
Sbjct: 91  SDGVVGSGSWNAMN 104


>gi|218507870|ref|ZP_03505748.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli Brasil 5]
          Length = 103

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
           S LD ++N       +D+FD   A R    + S+ PI+  +++A  ++AI  YQ I + G
Sbjct: 36  SALDGLLNAPRRGNWDDQFDAKAASRTASAVVSNTPILGPQSVASAQQAIMQYQQIAAAG 95

Query: 93  GWPEL 97
           GWPE+
Sbjct: 96  GWPEV 100


>gi|330860172|emb|CBX70493.1| hypothetical protein YEW_AT04120 [Yersinia enterocolitica W22703]
          Length = 85

 Score = 44.7 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           DL   LL+D   W+   +   +K   TT V +   VPV   Y++AW   D   QFR DIY
Sbjct: 6   DLANMLLQDA-GWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDIY 64

Query: 411 GLD 413
             D
Sbjct: 65  NYD 67


>gi|291299342|ref|YP_003510620.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568562|gb|ADD41527.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 323

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 3/105 (2%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           S   +P       +LGN       ++  L  +G    + G   AFDA  ESAVK FQ   
Sbjct: 27  SASAYPNAAFHMQNLGNRGADTLSVQHLLAQAGHQVEATG---AFDAATESAVKKFQESK 83

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           GLD  G+V   T EA+   ++       V  ++++   +Q++ L 
Sbjct: 84  GLDADGIVGPKTWEALAPNLETGASGEAVKALQVQLNAKQRLSLE 128


>gi|254514047|ref|ZP_05126108.1| general secretion pathway protein A [gamma proteobacterium NOR5-3]
 gi|219676290|gb|EED32655.1| general secretion pathway protein A [gamma proteobacterium NOR5-3]
          Length = 563

 Score = 43.9 bits (102), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R L LG+S   V+R+ E L    D  P       FDA +E  VKLFQ + GL   G++ 
Sbjct: 470 LRTLQLGDSGEDVRRVAE-LFARLDRQPKPLTESLFDARLEQRVKLFQQQQGLRADGVLG 528

Query: 159 SSTLEAMNVPV 169
            +TL A+++ V
Sbjct: 529 ENTLRALSLSV 539


>gi|255637048|gb|ACU18856.1| unknown [Glycine max]
          Length = 232

 Score = 43.5 bits (101), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R +H G ++  V  LR  L   G L      +  FD  VESA+K +Q  H L  +G+VD
Sbjct: 43  LRGVHRGQNAKGVGELRGYLQKYGYLTKGSSSNDNFDENVESALKHYQAFHHLRDTGVVD 102

Query: 159 SSTLEAMNVP 168
             T++ M++P
Sbjct: 103 DDTIKKMSLP 112


>gi|23013110|ref|ZP_00053052.1| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 84

 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 27/53 (50%)

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           P W     E +   R T  + L     V+ +Y +AW+ +  I+ FRDDIYG D
Sbjct: 10  PRWQGKLAENIAANRSTRTLMLERTTQVYMMYWTAWTDEAGILHFRDDIYGHD 62


>gi|268680155|ref|YP_003304586.1| ATP-dependent DNA helicase RecQ [Sulfurospirillum deleyianum DSM
           6946]
 gi|268618186|gb|ACZ12551.1| ATP-dependent DNA helicase RecQ [Sulfurospirillum deleyianum DSM
           6946]
          Length = 596

 Score = 43.1 bits (100), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARV--DMGID-SDIPIISKETIAQTE 79
           G S+  +  HA +  E  NE+YH+ +ND  D  +A V   MGID S+I  ++  ++ +T 
Sbjct: 250 GYSMRVRAYHAGLCTEEKNETYHAFLNDEIDVVVATVAFGMGIDKSNIRFVAHMSLPKTL 309

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR 115
           +   +YQ+I  R G   LP   L L ++S  V+  R
Sbjct: 310 E--NYYQEI-GRAGRDGLPSSTLLLFSASDIVEHKR 342


>gi|117929357|ref|YP_873908.1| cell wall hydrolase/autolysin [Acidothermus cellulolyticus 11B]
 gi|117649820|gb|ABK53922.1| cell wall hydrolase/autolysin [Acidothermus cellulolyticus 11B]
          Length = 378

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 7/72 (9%)

Query: 102 LHLGNSSVSVQRLRERLI-------ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           + LG+ S +V  +R RL         +GD D  +     FD  V+ A++ FQ + GL   
Sbjct: 7   MRLGDRSFAVAEIRHRLAHLGLLSRTNGDHDCVRAACDVFDETVDHAIRAFQQQRGLRTD 66

Query: 155 GMVDSSTLEAMN 166
           G+VD+ T  A++
Sbjct: 67  GVVDAETFRALD 78


>gi|254489086|ref|ZP_05102290.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
 gi|214042094|gb|EEB82733.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
          Length = 236

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 79/222 (35%), Gaps = 44/222 (19%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           + +LVNIPA  L A + G   LRS +IVG    +TP L + ++ + F P W         
Sbjct: 59  KAILVNIPAFELIAFDRGVPVLRSRIIVGTPWHRTPRLTTYVSAVRFRPTW--------- 109

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                 R  P  +         E    V+                   PG+ N +    I
Sbjct: 110 ------RPTPSMIASG------EYADRVW------------------PPGRNNPLGLVAI 139

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                   Y+HDT     F+   R  + GCVRV+    L  ++L          +  +  
Sbjct: 140 RLQPGLLVYLHDTNHREKFDQEYRALSHGCVRVQQWDRLVAFVLGI----DLAEVHRLAN 195

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            R+T  V  A  +PV   Y + +      I    DIY L   
Sbjct: 196 GRETFDVP-APPIPVTLGYFTRFPNAAGQIVDHPDIYRLGQA 236


>gi|290967813|ref|ZP_06559366.1| 3D domain protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290782172|gb|EFD94747.1| 3D domain protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 170

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           + +G S  +VQRL+  LI +G L  S G    F A    AV  FQ   GLD  G+V + T
Sbjct: 1   MEMGMSGAAVQRLQYMLIDAGYL--SDGADGVFGAATRDAVTRFQAAKGLDADGVVGTRT 58

Query: 162 LEAM 165
           L A+
Sbjct: 59  LTAL 62


>gi|251798289|ref|YP_003013020.1| cell wall hydrolase SleB [Paenibacillus sp. JDR-2]
 gi|247545915|gb|ACT02934.1| cell wall hydrolase SleB [Paenibacillus sp. JDR-2]
          Length = 212

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 11/99 (11%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG-LSVAFDAYVESAVKLFQMRHGLDPS 154
           E     L +G+    V+ L+ERL +   LD  KG ++  F A  +SAV  FQ   GL P 
Sbjct: 23  EASAASLKVGSKGTEVKDLQERLYM---LDYYKGNITSYFSASTKSAVAAFQKGAGLKPD 79

Query: 155 GMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKKLLEQKMG 192
           G+  S TL A++ V VD      + +L R+ +++  + G
Sbjct: 80  GVAGSITLHALHKVTVD------RSDLSRMARVVNAEAG 112


>gi|242092574|ref|XP_002436777.1| hypothetical protein SORBIDRAFT_10g008650 [Sorghum bicolor]
 gi|241915000|gb|EER88144.1| hypothetical protein SORBIDRAFT_10g008650 [Sorghum bicolor]
          Length = 370

 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            H G     + ++++ L   G L + S G +  FDA +E A+K++Q   GLD +G +D+S
Sbjct: 56  CHFGEQQQGLAKVKDYLSHFGYLPESSSGFNDLFDADLEEAIKVYQRNFGLDVTGAMDAS 115

Query: 161 TLEAMNVP 168
           T+  M  P
Sbjct: 116 TVAQMMAP 123


>gi|329118082|ref|ZP_08246794.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465742|gb|EGF12015.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 349

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +V++NIP   L    +GK+     V VG+   QT I   +I    FNP W IP+S IQK+
Sbjct: 58  HVVINIPQQRLFLYSDGKLSKIYPVAVGKAMTQTNIGSHKIGAKAFNPTWHIPKS-IQKE 116

Query: 255 M 255
           +
Sbjct: 117 L 117


>gi|298492482|ref|YP_003722659.1| peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
 gi|298234400|gb|ADI65536.1| Peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
          Length = 249

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 9/77 (11%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           ++ GWP L  R  + G+  V +Q+L + L  + G +D   G++       E+AVK  Q+R
Sbjct: 173 TKEGWPIL--RLGNRGSEVVKLQKLLQNLGFLKGSIDGDFGITT------EAAVKAAQIR 224

Query: 149 HGLDPSGMVDSSTLEAM 165
           +GL P G+   +T EA 
Sbjct: 225 YGLQPDGIAGGATWEAF 241


>gi|218672072|ref|ZP_03521741.1| hypothetical protein RetlG_10705 [Rhizobium etli GR56]
          Length = 58

 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/34 (44%), Positives = 24/34 (70%)

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           VK+  +VPV+  Y +AW  KD ++++ DD+YG D
Sbjct: 7   VKVPQKVPVYVSYFTAWPNKDGVVEYFDDVYGRD 40


>gi|325267376|ref|ZP_08134037.1| ErfK/YbiS/YcfS/YnhG family protein [Kingella denitrificans ATCC
           33394]
 gi|324981171|gb|EGC16822.1| ErfK/YbiS/YcfS/YnhG family protein [Kingella denitrificans ATCC
           33394]
          Length = 363

 Score = 40.8 bits (94), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 30/57 (52%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +YV++NIP   L    NG++     V VG+   QT +   RI    FNP W IP SI
Sbjct: 78  QYVVINIPQQRLFLYNNGRLQKVYPVAVGKAMTQTTLGEHRIGAKAFNPTWHIPLSI 134


>gi|83588974|ref|YP_428983.1| ErfK/YbiS/YcfS/YnhG [Moorella thermoacetica ATCC 39073]
 gi|83571888|gb|ABC18440.1| ErfK/YbiS/YcfS/YnhG [Moorella thermoacetica ATCC 39073]
          Length = 294

 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 11/80 (13%)

Query: 97  LPIRPLHLGNSSVSV----QRLRER-LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           +P  PL  G  S  V     RLRE+   + G  D   GL        E AVK FQ+ HGL
Sbjct: 218 MPTGPLKPGQGSPEVITLQARLREKGFYLFGPTDGDYGL------MTELAVKEFQLYHGL 271

Query: 152 DPSGMVDSSTLEAMNVPVDL 171
             +G+ D+ TL A+   V L
Sbjct: 272 TATGVADARTLRALGFDVPL 291


>gi|332968887|gb|EGK07934.1| ErfK/YbiS/YcfS/YnhG family protein [Kingella kingae ATCC 23330]
          Length = 305

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 30/57 (52%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +YV++N+P   L    NG++     V VG+   QT +   RI    FNP W IP SI
Sbjct: 36  QYVVINVPQQRLFLYNNGRLQKVYPVAVGKAMTQTNLGEHRIGAKAFNPTWHIPLSI 92


>gi|119511408|ref|ZP_01630520.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
 gi|119463953|gb|EAW44878.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
          Length = 267

 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 12/74 (16%)

Query: 97  LPIRPLHLGNSSVSVQRLRERL----IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           LPI  L LG  +  V++L+ RL     ++GD+D   G++       E+AVK  Q R+GL+
Sbjct: 200 LPI--LRLGMRNSEVRKLQARLKQLGFLAGDVDGDFGMNT------EAAVKAAQQRYGLE 251

Query: 153 PSGMVDSSTLEAMN 166
             G+V  +T EA++
Sbjct: 252 ADGVVGGATWEALS 265


>gi|17231786|ref|NP_488334.1| hypothetical protein all4294 [Nostoc sp. PCC 7120]
 gi|17133430|dbj|BAB75993.1| all4294 [Nostoc sp. PCC 7120]
          Length = 508

 Score = 40.4 bits (93), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+   +V+ +++RL   G    S  L   FD Y  ++V  FQ  + L+P+G VDS T
Sbjct: 365 LTVGDRGNNVRAVQQRLTQLGFFTGS--LDGYFDEYTRASVASFQQYYQLNPTGNVDSQT 422

Query: 162 LEAMNV 167
            +A+N+
Sbjct: 423 WQALNI 428


>gi|75907469|ref|YP_321765.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701194|gb|ABA20870.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 508

 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 6/56 (10%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           QRL +    +G LD        FD Y  ++V  FQ  + L+P+G VDS T +A+N+
Sbjct: 379 QRLTQLGFFTGSLDG------YFDEYTRASVASFQQYYQLNPTGNVDSQTWQALNI 428


>gi|15807153|ref|NP_295882.1| hypothetical protein DR_2159 [Deinococcus radiodurans R1]
 gi|6459963|gb|AAF11713.1|AE002049_18 hypothetical protein DR_2159 [Deinococcus radiodurans R1]
          Length = 255

 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           V++L+ RL+    +DP KG    F    E+ V +FQ+ +GL P+G+VD +T   +  P
Sbjct: 180 VKQLQLRLMDRSHVDPGKGGDGWFGPVTEANVIVFQLANGLKPTGVVDRATWTTLFSP 237


>gi|15676382|ref|NP_273518.1| hypothetical protein NMB0471 [Neisseria meningitidis MC58]
 gi|7225699|gb|AAF40908.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|316984751|gb|EFV63710.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|325140891|gb|EGC63400.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis CU385]
 gi|325199656|gb|ADY95111.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis H44/76]
          Length = 358

 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSI 103


>gi|325202722|gb|ADY98176.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M01-240149]
 gi|325208718|gb|ADZ04170.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           NZ-05/33]
          Length = 358

 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSI 103


>gi|121635388|ref|YP_975633.1| hypothetical protein NMC1677 [Neisseria meningitidis FAM18]
 gi|161870603|ref|YP_001599775.1| hypothetical protein NMCC_1671 [Neisseria meningitidis 053442]
 gi|218768765|ref|YP_002343277.1| hypothetical protein NMA2014 [Neisseria meningitidis Z2491]
 gi|254805501|ref|YP_003083722.1| hypothetical protein NMO_1571 [Neisseria meningitidis alpha14]
 gi|120867094|emb|CAM10860.1| hypothetical protein NMC1677 [Neisseria meningitidis FAM18]
 gi|121052773|emb|CAM09119.1| hypothetical protein NMA2014 [Neisseria meningitidis Z2491]
 gi|161596156|gb|ABX73816.1| conserved hypothetical protein [Neisseria meningitidis 053442]
 gi|254669043|emb|CBA07504.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
 gi|254670599|emb|CBA06543.1| hypothetical protein NME_1166 [Neisseria meningitidis alpha153]
 gi|254672572|emb|CBA06223.1| hypothetical protein NMW_0790 [Neisseria meningitidis alpha275]
 gi|261391984|emb|CAX49448.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
           8013]
 gi|308388672|gb|ADO30992.1| hypothetical protein NMBB_0524 [Neisseria meningitidis alpha710]
 gi|319411005|emb|CBY91403.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
           WUE 2594]
 gi|325130769|gb|EGC53504.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           OX99.30304]
 gi|325134836|gb|EGC57472.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis M13399]
 gi|325136857|gb|EGC59455.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis M0579]
 gi|325138839|gb|EGC61390.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis ES14902]
 gi|325142905|gb|EGC65267.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           961-5945]
 gi|325198847|gb|ADY94303.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis G2136]
 gi|325203575|gb|ADY99028.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M01-240355]
 gi|325205535|gb|ADZ00988.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M04-240196]
          Length = 358

 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSI 103


>gi|20808596|ref|NP_623767.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis
           MB4]
 gi|254479061|ref|ZP_05092416.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|20517226|gb|AAM25371.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis
           MB4]
 gi|214035017|gb|EEB75736.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 324

 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L LG+    V  L+ RL   G D  P  G+   F    E+AVK +Q   GL P+G+VD +
Sbjct: 179 LRLGDRGPFVVNLQARLKSLGFDPGPIDGI---FGPKTEAAVKAYQQSRGLPPTGIVDET 235

Query: 161 TLEAM 165
           T  A+
Sbjct: 236 TWNAL 240


>gi|7159629|emb|CAB76364.1| matrix metalloproteinase [Cucumis sativus]
          Length = 320

 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 6/76 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERL----IISGDLDPSKG--LSVAFDAYVESAVKLFQMRHGLD 152
           ++  HLG++   + ++++ L     I+ ++           FD  +ESA+K +Q  H L 
Sbjct: 51  LQGCHLGDTKQGIHQIKKYLQRFGYITTNIQKHSNPIFDDTFDHILESALKTYQTNHNLA 110

Query: 153 PSGMVDSSTLEAMNVP 168
           PSG++DS+T+  + +P
Sbjct: 111 PSGILDSNTIAQIAMP 126


>gi|325145008|gb|EGC67291.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M01-240013]
          Length = 358

 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSI 103


>gi|325128783|gb|EGC51645.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis N1568]
          Length = 344

 Score = 40.0 bits (92), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI
Sbjct: 33  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSI 89


>gi|304386762|ref|ZP_07369030.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis ATCC
           13091]
 gi|304339162|gb|EFM05248.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis ATCC
           13091]
          Length = 365

 Score = 40.0 bits (92), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSI 103


>gi|291532676|emb|CBL05789.1| Uncharacterized protein conserved in bacteria [Megamonas
           hypermegale ART12/1]
          Length = 395

 Score = 40.0 bits (92), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 32/57 (56%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           R++L+NIPA SL   +N K      V VG+++ +TP+   ++   + NP W  P  +
Sbjct: 52  RWILINIPARSLRLYDNDKCIEMYPVGVGKIETKTPVGFYKVVEKIVNPTWTDPADV 108


>gi|260545357|ref|ZP_05821098.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
 gi|260096764|gb|EEW80639.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
          Length = 517

 Score = 40.0 bits (92), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 367 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 425

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            RYV+VN PA      E+G+  L   V++G
Sbjct: 426 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIG 455


>gi|317126727|ref|YP_004100839.1| cell wall hydrolase/autolysin [Intrasporangium calvum DSM 43043]
 gi|315590815|gb|ADU50112.1| cell wall hydrolase/autolysin [Intrasporangium calvum DSM 43043]
          Length = 418

 Score = 40.0 bits (92), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 8/72 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPS-------KGLSVAFDAYVESAVKLFQMRHGLDPS 154
           L  G+S  +V  +  RL+++GDL  S       +G +V FD  VE AVK FQ R GL   
Sbjct: 9   LRRGDSGPAVADVCARLLLTGDLPASWAERGVPRGTAV-FDETVEEAVKSFQQRRGLLVD 67

Query: 155 GMVDSSTLEAMN 166
           G+V  ST   ++
Sbjct: 68  GVVGRSTYSVLD 79


>gi|260883727|ref|ZP_05895341.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260873255|gb|EEX80324.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
          Length = 517

 Score = 40.0 bits (92), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 367 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 425

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            RYV+VN PA      E+G+  L   V++G
Sbjct: 426 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIG 455


>gi|225024391|ref|ZP_03713583.1| hypothetical protein EIKCOROL_01266 [Eikenella corrodens ATCC
           23834]
 gi|224942888|gb|EEG24097.1| hypothetical protein EIKCOROL_01266 [Eikenella corrodens ATCC
           23834]
          Length = 310

 Score = 40.0 bits (92), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NIP   L   ENG++     V VG+   +TP+ +  I    +NP W IP SI ++
Sbjct: 33  QHVVINIPQMRLFLYENGQLKNVYPVAVGKNRTRTPLGNYHIGSKAYNPTWSIPASIRRE 92

Query: 254 DMMALL 259
              A L
Sbjct: 93  RAAAGL 98


>gi|325131741|gb|EGC54443.1| ErfK/YbiS/YcfS/YnhG family [Neisseria meningitidis M6190]
          Length = 207

 Score = 40.0 bits (92), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+S IQK
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS-IQK 105

Query: 254 D 254
           +
Sbjct: 106 E 106


>gi|302794749|ref|XP_002979138.1| hypothetical protein SELMODRAFT_110370 [Selaginella moellendorffii]
 gi|300152906|gb|EFJ19546.1| hypothetical protein SELMODRAFT_110370 [Selaginella moellendorffii]
          Length = 361

 Score = 40.0 bits (92), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 5/99 (5%)

Query: 92  GGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRH 149
           G W +L  +   H G+S  ++Q+L+   +  G L  S     ++FD  +E+AV+L+Q   
Sbjct: 38  GAWADLLSLVDAHKGDSKPAIQKLKSYFVDFGYLGNSTLTADLSFDDALEAAVRLYQQNF 97

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
            L  +G +DS+T+  +  P   R   + V+   + ++L+
Sbjct: 98  HLPVTGNLDSATIAQLVTP---RCGGIDVDPSGVSQMLQ 133


>gi|260757925|ref|ZP_05870273.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260761747|ref|ZP_05874090.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260668243|gb|EEX55183.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260672179|gb|EEX59000.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 527

 Score = 40.0 bits (92), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 377 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 435

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            RYV+VN PA      E+G+  L   V++G
Sbjct: 436 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIG 465


>gi|260754701|ref|ZP_05867049.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|260674809|gb|EEX61630.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
          Length = 527

 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 377 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 435

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            RYV+VN PA      E+G+  L   V++G
Sbjct: 436 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIG 465


>gi|310790817|gb|EFQ26350.1| tRNA synthetase class II core domain-containing protein [Glomerella
           graminicola M1.001]
          Length = 514

 Score = 40.0 bits (92), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 17/90 (18%)

Query: 133 AFDAYVESAVKLFQMRHGLDP------SGMVDSSTLEAMNVPVDLRIRQLQVNLMR---- 182
           A++ Y E ++++F    GL+       SGM     LEAM +P D+R+    ++L R    
Sbjct: 424 AYNPYTEPSMEIFSFHKGLNKLVEIGNSGMFRPEMLEAMGLPKDMRVYGWGLSLERPTMI 483

Query: 183 ------IKKLLEQKMGLRYVLVNIPAASLE 206
                 I++LL  K+ L ++  N PA  LE
Sbjct: 484 KYGISNIRELLGHKVDLNFIERN-PAVRLE 512


>gi|261213952|ref|ZP_05928233.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915559|gb|EEX82420.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 527

 Score = 39.7 bits (91), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++  L    G
Sbjct: 377 YDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLR-WLPHDFG 435

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            RYV+VN PA      E+G+  L   V++G
Sbjct: 436 KRYVMVNQPAYHAGYYEDGQQKLGMNVVIG 465


>gi|320007102|gb|ADW01952.1| Peptidoglycan-binding domain 1 protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 126

 Score = 39.7 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 31/64 (48%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   VQ L+  L+  G    S G+   F A  ESAV+ FQ   G+   G+V  +T   
Sbjct: 61  GDSGAKVQELQALLVFKGFSVGSSGVDGQFGAGTESAVRRFQTSRGISSDGVVGPTTWHY 120

Query: 165 MNVP 168
           +  P
Sbjct: 121 LRTP 124


>gi|113475624|ref|YP_721685.1| peptidoglycan binding domain-containing protein [Trichodesmium
           erythraeum IMS101]
 gi|110166672|gb|ABG51212.1| Peptidoglycan-binding domain 1 [Trichodesmium erythraeum IMS101]
          Length = 487

 Score = 39.7 bits (91), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L LGN+ + V+RL++RL   G     + ++  FD   E+AV  FQ R+ + P+G+V  
Sbjct: 264 RVLRLGNTGLDVRRLQQRLRSLGYYQ--RQITNYFDLSTETAVIDFQKRNRITPTGIVGQ 321

Query: 160 ST 161
           +T
Sbjct: 322 TT 323


>gi|294668409|ref|ZP_06733512.1| hypothetical protein NEIELOOT_00327 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309727|gb|EFE50970.1| hypothetical protein NEIELOOT_00327 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 317

 Score = 39.7 bits (91), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +V++NIP   L    +GK+     V VG+   QT +   +I    FNP W IP+S IQK+
Sbjct: 33  HVVINIPQQRLFLYTDGKLAKIYPVAVGKAMTQTNLGSHKIGAKAFNPIWHIPKS-IQKE 91

Query: 255 M 255
           +
Sbjct: 92  L 92


>gi|313667851|ref|YP_004048135.1| hypothetical protein NLA_5060 [Neisseria lactamica ST-640]
 gi|313005313|emb|CBN86746.1| hypothetical protein NLA_5060 [Neisseria lactamica 020-06]
          Length = 340

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+S IQK
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKS-IQK 105

Query: 254 D 254
           +
Sbjct: 106 E 106


>gi|50550865|ref|XP_502905.1| YALI0D16643p [Yarrowia lipolytica]
 gi|49648773|emb|CAG81096.1| YALI0D16643p [Yarrowia lipolytica]
          Length = 491

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 17/90 (18%)

Query: 133 AFDAYVESAVKLFQMRHGLDP------SGMVDSSTLEAMNVPVDLRIRQLQVNLMR---- 182
           A++ Y E ++++F    GL        SGM     LEAM +P DLR+    ++L R    
Sbjct: 399 AYNPYTEPSLEIFSWHEGLGKWVEIGNSGMFRPEMLEAMGLPKDLRVHGWGLSLERPTMI 458

Query: 183 ------IKKLLEQKMGLRYVLVNIPAASLE 206
                 I++LL  K+ L +V  N PA  L+
Sbjct: 459 KYGVSNIRELLGHKVSLDFV-ENNPAVRLD 487


>gi|59801822|ref|YP_208534.1| hypothetical protein NGO1484 [Neisseria gonorrhoeae FA 1090]
 gi|194099286|ref|YP_002002380.1| hypothetical protein NGK_1755 [Neisseria gonorrhoeae NCCP11945]
 gi|239999553|ref|ZP_04719477.1| hypothetical protein Ngon3_08731 [Neisseria gonorrhoeae 35/02]
 gi|240014729|ref|ZP_04721642.1| hypothetical protein NgonD_08818 [Neisseria gonorrhoeae DGI18]
 gi|240017177|ref|ZP_04723717.1| hypothetical protein NgonFA_08426 [Neisseria gonorrhoeae FA6140]
 gi|240081184|ref|ZP_04725727.1| hypothetical protein NgonF_07718 [Neisseria gonorrhoeae FA19]
 gi|240113397|ref|ZP_04727887.1| hypothetical protein NgonM_07477 [Neisseria gonorrhoeae MS11]
 gi|240116255|ref|ZP_04730317.1| hypothetical protein NgonPID1_08470 [Neisseria gonorrhoeae PID18]
 gi|240121252|ref|ZP_04734214.1| hypothetical protein NgonPI_05693 [Neisseria gonorrhoeae PID24-1]
 gi|240124087|ref|ZP_04737043.1| hypothetical protein NgonP_09138 [Neisseria gonorrhoeae PID332]
 gi|240126296|ref|ZP_04739182.1| hypothetical protein NgonSK_08827 [Neisseria gonorrhoeae SK-92-679]
 gi|240128752|ref|ZP_04741413.1| hypothetical protein NgonS_09032 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494270|ref|ZP_05107441.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|260439930|ref|ZP_05793746.1| hypothetical protein NgonDG_02373 [Neisseria gonorrhoeae DGI2]
 gi|268595365|ref|ZP_06129532.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268597296|ref|ZP_06131463.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268599470|ref|ZP_06133637.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268601920|ref|ZP_06136087.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268682710|ref|ZP_06149572.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684880|ref|ZP_06151742.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268687137|ref|ZP_06153999.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291043209|ref|ZP_06568932.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293398537|ref|ZP_06642715.1| hypothetical protein NGNG_01196 [Neisseria gonorrhoeae F62]
 gi|59718717|gb|AAW90122.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|193934576|gb|ACF30400.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|226513310|gb|EEH62655.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268548754|gb|EEZ44172.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268551084|gb|EEZ46103.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268583601|gb|EEZ48277.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268586051|gb|EEZ50727.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268622994|gb|EEZ55394.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268625164|gb|EEZ57564.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268627421|gb|EEZ59821.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291012815|gb|EFE04798.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291611008|gb|EFF40105.1| hypothetical protein NGNG_01196 [Neisseria gonorrhoeae F62]
 gi|317164801|gb|ADV08342.1| hypothetical protein NGTW08_1380 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 358

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSI 103


>gi|302813804|ref|XP_002988587.1| hypothetical protein SELMODRAFT_128150 [Selaginella moellendorffii]
 gi|300143694|gb|EFJ10383.1| hypothetical protein SELMODRAFT_128150 [Selaginella moellendorffii]
          Length = 361

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 5/99 (5%)

Query: 92  GGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRH 149
           G W +L  +   H G+S  ++Q+L+   +  G L  S     ++FD  +E+AV+L+Q   
Sbjct: 38  GAWADLLSLVDAHKGDSKPAIQKLKSYFVDFGYLGNSTLTADLSFDDALEAAVRLYQQNF 97

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
            L  +G +DS+T+  +  P   R   + V+   + ++L+
Sbjct: 98  RLPVTGNLDSATIAQLVTP---RCGGIDVDPSGVSQMLQ 133


>gi|240118541|ref|ZP_04732603.1| hypothetical protein NgonPID_08787 [Neisseria gonorrhoeae PID1]
 gi|268604251|ref|ZP_06138418.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268588382|gb|EEZ53058.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
          Length = 358

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSI 103


>gi|323309299|gb|EGA62519.1| Frs2p [Saccharomyces cerevisiae FostersO]
          Length = 305

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 24/120 (20%)

Query: 104 LGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDP------SGM 156
           LG+    ++   ER+ ++G    P+      ++ Y E ++++F    GL        SGM
Sbjct: 188 LGDLIKFMEEFFERMGVTGLRFKPT------YNPYTEPSMEIFSWHEGLQKWVEIGNSGM 241

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMR----------IKKLLEQKMGLRYVLVNIPAASLE 206
                LE+M +P DLR+    ++L R          I++LL  K+ L ++  N PAA L+
Sbjct: 242 FRPEMLESMGLPKDLRVLGWGLSLERPTMIKYKVQNIRELLGHKVSLDFIETN-PAARLD 300


>gi|296315100|ref|ZP_06865041.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria polysaccharea ATCC
           43768]
 gi|296838011|gb|EFH21949.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria polysaccharea ATCC
           43768]
          Length = 326

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+S IQK
Sbjct: 33  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKS-IQK 91

Query: 254 D 254
           +
Sbjct: 92  E 92


>gi|119488463|ref|ZP_01621636.1| hypothetical protein L8106_23835 [Lyngbya sp. PCC 8106]
 gi|119455274|gb|EAW36414.1| hypothetical protein L8106_23835 [Lyngbya sp. PCC 8106]
          Length = 238

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 39/77 (50%), Gaps = 7/77 (9%)

Query: 98  PIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           PIR   L  G     V  L++RL I G  DP +  SV F +  E AV+ FQ   GL+ +G
Sbjct: 77  PIRRYTLEPGTRGTQVTGLQQRLQIHG-FDPGRVDSV-FGSRTEQAVRAFQQARGLEVNG 134

Query: 156 MVDSST---LEAMNVPV 169
           +VD  T   LE    PV
Sbjct: 135 IVDRGTWKLLETTPRPV 151


>gi|256824326|ref|YP_003148286.1| cell wall-associated hydrolase, invasion-associated protein
           [Kytococcus sedentarius DSM 20547]
 gi|256687719|gb|ACV05521.1| cell wall-associated hydrolase, invasion-associated protein
           [Kytococcus sedentarius DSM 20547]
          Length = 422

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P+RP H G     VQRL+  L   G++ P   L   + A    AV+ FQ R GL   G+ 
Sbjct: 40  PLRPGHRGGY---VQRLQWALNKVGNVTPKVALDGVYGAITTRAVRAFQTRQGLLVDGIA 96

Query: 158 DSSTLEAMNVPVD 170
            + T   ++  +D
Sbjct: 97  GTGTKRRLDALLD 109


>gi|261401380|ref|ZP_05987505.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria lactamica ATCC 23970]
 gi|269208587|gb|EEZ75042.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria lactamica ATCC 23970]
          Length = 326

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+S IQK
Sbjct: 33  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKS-IQK 91

Query: 254 D 254
           +
Sbjct: 92  E 92


>gi|226502831|ref|NP_001142095.1| hypothetical protein LOC100274259 [Zea mays]
 gi|194707100|gb|ACF87634.1| unknown [Zea mays]
          Length = 370

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDP--SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            HLG     + ++++ L   G L P  S   +  FDA +E A+K++Q   GL  +G++D+
Sbjct: 55  CHLGEQQQGLAKVKDYLSRFGYLPPESSGSFNDVFDADLEEAIKVYQRNFGLGITGVMDA 114

Query: 160 STLEAMNVP 168
           ST+  M  P
Sbjct: 115 STVAQMMAP 123


>gi|282600699|ref|ZP_06257697.1| putative cell wall lytic activity [Subdoligranulum variabile DSM
           15176]
 gi|282571458|gb|EFB76993.1| putative cell wall lytic activity [Subdoligranulum variabile DSM
           15176]
          Length = 508

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           S G WP + ++    G+    VQ     L       P+  +   F A  E AVK+FQ   
Sbjct: 49  SSGSWPGVVLKRGSTGSEVEQVQFWLSELAQFNSALPALTVDGNFGAATERAVKIFQQEQ 108

Query: 150 GLDPSGMVDSSTLEAM 165
           GL   G+V  +T EA+
Sbjct: 109 GLTADGVVGQATWEAL 124


>gi|313885142|ref|ZP_07818894.1| peptidase, S41 family [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619833|gb|EFR31270.1| peptidase, S41 family [Eremococcus coleocola ACS-139-V-Col8]
          Length = 486

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG  S SV  L   +I++G +  S      FD   E AVK FQ  H LD  G+V   T
Sbjct: 400 LSLGQHSDSVANLN--VILNG-MGYSANQKDEFDQDTEKAVKAFQKDHDLDQDGIVTGDT 456

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
             A+N+     ++     L +  K+L++K
Sbjct: 457 SAAINLAAQEYLQNHDGQLDQAIKILKEK 485


>gi|260588566|ref|ZP_05854479.1| spore cortex-lytic enzyme SleC [Blautia hansenii DSM 20583]
 gi|260541041|gb|EEX21610.1| spore cortex-lytic enzyme SleC [Blautia hansenii DSM 20583]
          Length = 421

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 11/93 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPS-KGLSV--AFDAYVESAVKLFQMRHGLDPS 154
           P +PL +G+S   +++++E+L    +  P+   +SV   F    ++AVK FQ   GL  +
Sbjct: 337 PGQPLDIGSSGSKIRQIQEQLNAIANAYPALPKISVDGVFGENTQNAVKKFQQIFGLPAT 396

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
           G++D ST           I+++ V + RI +L+
Sbjct: 397 GIIDYSTW--------YEIQEIYVGVTRIAELV 421


>gi|294787984|ref|ZP_06753228.1| ErfK/YbiS/YcfS/YnhG family protein [Simonsiella muelleri ATCC
           29453]
 gi|294484277|gb|EFG31960.1| ErfK/YbiS/YcfS/YnhG family protein [Simonsiella muelleri ATCC
           29453]
          Length = 378

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           YVL+NIP   L    NG +     V VG+   QT +   +I    ++P W IP+S IQ +
Sbjct: 19  YVLINIPQQRLFLFNNGALEKVYPVAVGKAMTQTNLGEHKIGGKAYDPTWHIPKS-IQAE 77

Query: 255 M 255
           M
Sbjct: 78  M 78


>gi|75910509|ref|YP_324805.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75704234|gb|ABA23910.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 305

 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           GWP L      +G  +  V +L++RL   G L    G+   F    E A+K  Q R+G++
Sbjct: 231 GWPIL-----RVGMKNSEVTKLQQRLSQLGFLK--GGVDGYFGVQTEEALKAAQRRYGIE 283

Query: 153 PSGMVDSSTLEAM 165
           P G+   +T EA+
Sbjct: 284 PDGVAGGATWEAL 296


>gi|120554152|ref|YP_958503.1| hypothetical protein Maqu_1226 [Marinobacter aquaeolei VT8]
 gi|120324001|gb|ABM18316.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
          Length = 87

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 15/81 (18%)

Query: 81  AIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDL-----DPSKGLSVA 133
            +A Y+ +  +GGWP+LP R   L  G+    V  LR+RL+++G+L     D   G S+ 
Sbjct: 4   GLAQYRHLERQGGWPQLPNRQQSLRPGDVHEEVALLRKRLLVTGELAITHVDELAGQSIV 63

Query: 134 --------FDAYVESAVKLFQ 146
                   +D ++  AV+ FQ
Sbjct: 64  SSHPETYEYDEHLVDAVRRFQ 84


>gi|295703171|ref|YP_003596246.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
 gi|294800830|gb|ADF37896.1| N-acetylmuramoyl-L-alanine amidase cwlL (Cell wall hydrolase)
           (Autolysin) [Bacillus megaterium DSM 319]
          Length = 281

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+ L+++L   G    +KG    F A  +SAV+ FQ  HGL   G+V  ST
Sbjct: 117 LKKGSKGNAVKELQQKLTSLGY--NTKGTDGVFGANTDSAVRKFQKDHGLTADGIVGPST 174

Query: 162 LEAM 165
            +A+
Sbjct: 175 YKAL 178


>gi|331082131|ref|ZP_08331259.1| hypothetical protein HMPREF0992_00183 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330405726|gb|EGG85256.1| hypothetical protein HMPREF0992_00183 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 163

 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 11/93 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPS-KGLSV--AFDAYVESAVKLFQMRHGLDPS 154
           P +PL +G+S   +++++E+L    +  P+   +SV   F    ++AVK FQ   GL  +
Sbjct: 79  PGQPLDIGSSGSKIRQIQEQLNAIANAYPALPKISVDGVFGENTQNAVKKFQQIFGLPAT 138

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
           G++D ST           I+++ V + RI +L+
Sbjct: 139 GIIDYSTW--------YEIQEIYVGVTRIAELV 163


>gi|189490384|ref|YP_001956952.1| virion structural protein [Pseudomonas phage 201phi2-1]
 gi|164609449|gb|ABY63058.1| virion structural protein [Pseudomonas phage 201phi2-1]
          Length = 262

 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 72/186 (38%), Gaps = 32/186 (17%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V RL+ +LI  G      G+   F    E AVK  Q+R  L   G+V ++T
Sbjct: 3   LKNGSKGDDVIRLQRKLIGLGYSVKDDGV---FGDNTEKAVKAVQLRFNLKDDGIVGNNT 59

Query: 162 LEAMNVPVDLR-----------IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
              ++ P   R              LQV+L  +K + E         V  PA     + +
Sbjct: 60  WAVLDTPTTTRPALTDKDYQWAADYLQVDLPAVKAVKE---------VEAPAGGF--LPD 108

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G+V    T++    +R       R+N I   P+     SI+ K     L +  +Y +   
Sbjct: 109 GRV----TIL---YERHVMFKRLRVNGINPEPFAAANPSIVNKSTGGYLGKSAEYTRLEQ 161

Query: 271 IHMIDE 276
              IDE
Sbjct: 162 AEKIDE 167


>gi|159040579|ref|YP_001539832.1| cell wall hydrolase/autolysin [Salinispora arenicola CNS-205]
 gi|157919414|gb|ABW00842.1| cell wall hydrolase/autolysin [Salinispora arenicola CNS-205]
          Length = 387

 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 34/69 (49%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +RP+  G+   +V  +R  L     L PS   S  FDA+ E AV+ FQ   GL   G V 
Sbjct: 1   MRPIRPGDRGPAVTEIRRVLAGLDLLVPSAPDSDEFDAHTERAVRAFQQSRGLSVDGRVG 60

Query: 159 SSTLEAMNV 167
           + T  A++ 
Sbjct: 61  TETWRALDA 69


>gi|330860174|emb|CBX70495.1| hypothetical protein YEW_AT04140 [Yersinia enterocolitica W22703]
          Length = 112

 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ  HGL   G++ + T E +NV    R   L +N+ R+ ++L  ++    ++VNI
Sbjct: 29  AVKRFQRWHGLSDDGVIGARTREWLNVSPQTRATLLALNIQRL-RILPGRVD-NGIMVNI 86

Query: 201 PAASLEAVENGKVG 214
           P  SL   +    G
Sbjct: 87  PNYSLNYYKKWHTG 100


>gi|218288979|ref|ZP_03493216.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240804|gb|EED07982.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 719

 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 10/68 (14%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA----YVESAVKLFQMRHGLDPSGMV 157
           L LG++  +V++L+E      DL+   GL +A D       ++AVK FQ++HG+   G+ 
Sbjct: 619 LQLGSTGPAVKQLQE------DLNKVLGLHLAVDGVFGPATQAAVKSFQLQHGITVDGIY 672

Query: 158 DSSTLEAM 165
              T +AM
Sbjct: 673 GPQTAQAM 680


>gi|145597090|ref|YP_001161387.1| cell wall hydrolase/autolysin [Salinispora tropica CNB-440]
 gi|145306427|gb|ABP57009.1| cell wall hydrolase/autolysin [Salinispora tropica CNB-440]
          Length = 392

 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +RP+  G+   +V  +R+ L     L P+   S  FDA+ E AV+ FQ   GL   G V 
Sbjct: 1   MRPIRPGDRGPAVTEIRKVLAGLDLLVPAAPDSDEFDAHTERAVRAFQQSRGLSVDGRVG 60

Query: 159 SSTLEAMNV 167
           + T +A++ 
Sbjct: 61  TETWQALDA 69


>gi|326497859|dbj|BAJ94792.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518943|dbj|BAJ92632.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326528353|dbj|BAJ93358.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 369

 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            H+G+    + RL++ L   G L     S   S AFDA +E+AV  +Q   GL+ +G++D
Sbjct: 54  CHMGDERDGLARLKDYLSHFGYLSEAPTSSPFSDAFDAELEAAVATYQRNFGLNATGVLD 113

Query: 159 SSTLEAMNVP 168
             T+  M  P
Sbjct: 114 PPTVSQMVAP 123


>gi|332970134|gb|EGK09128.1| zinc D-Ala-D-Ala carboxypeptidase [Desmospora sp. 8437]
          Length = 243

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 7/77 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRH 149
           GW     R L  G+S   V+ L+ R+       PS+    +   F    E+AVK FQ  +
Sbjct: 34  GWS----RTLKQGDSGADVRELQIRVAGWAADSPSRTYVAVDGVFGPGTEAAVKRFQRAY 89

Query: 150 GLDPSGMVDSSTLEAMN 166
           GL P G+V  +T  A+N
Sbjct: 90  GLSPDGVVGPATQSALN 106


>gi|319639270|ref|ZP_07994021.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa C102]
 gi|317399454|gb|EFV80124.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa C102]
          Length = 368

 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+SI
Sbjct: 48  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTTLGEHKIGAKAYNPVWHIPKSI 104


>gi|261365343|ref|ZP_05978226.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa ATCC 25996]
 gi|288566283|gb|EFC87843.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa ATCC 25996]
          Length = 332

 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NIP   L    +G++     V VG+   QT +   +I    FNP W IP+S IQK
Sbjct: 33  QHVVINIPQQRLFLYTDGQLTKIYPVAVGKAMTQTNLGEHKIGAKAFNPTWHIPKS-IQK 91

Query: 254 D 254
           +
Sbjct: 92  E 92


>gi|172947|gb|AAA35152.1| Phe-RNA synthetase [Saccharomyces cerevisiae]
          Length = 503

 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 17/90 (18%)

Query: 133 AFDAYVESAVKLFQMRHGLDP------SGMVDSSTLEAMNVPVDLRIRQLQVNLMR---- 182
            ++ Y E ++++F    GL        SGM     LE+M +P DLR+    ++L R    
Sbjct: 410 TYNPYTEPSMEIFSWHEGLQKWVEIGNSGMFRPEMLESMGLPKDLRVLGWGLSLERPTMI 469

Query: 183 ------IKKLLEQKMGLRYVLVNIPAASLE 206
                 I++LL  K+ L ++  N PAA L+
Sbjct: 470 KYKVQNIRELLGHKVSLDFIETN-PAARLD 498


>gi|256268905|gb|EEU04254.1| Frs2p [Saccharomyces cerevisiae JAY291]
          Length = 503

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 17/90 (18%)

Query: 133 AFDAYVESAVKLFQMRHGLDP------SGMVDSSTLEAMNVPVDLRIRQLQVNLMR---- 182
            ++ Y E ++++F    GL        SGM     LE+M +P DLR+    ++L R    
Sbjct: 410 TYNPYTEPSMEIFSWHEGLQKWVEIGNSGMFRPEMLESMGLPKDLRVLGWGLSLERPTMI 469

Query: 183 ------IKKLLEQKMGLRYVLVNIPAASLE 206
                 I++LL  K+ L ++  N PAA L+
Sbjct: 470 KYKVQNIRELLGHKVSLDFIETN-PAARLD 498


>gi|254465139|ref|ZP_05078550.1| Putative peptidoglycan binding domain protein [Rhodobacterales
           bacterium Y4I]
 gi|206686047|gb|EDZ46529.1| Putative peptidoglycan binding domain protein [Rhodobacterales
           bacterium Y4I]
          Length = 3030

 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           I P+   ++   V  L+E L + G  +D  +    AF    ++A++  Q R GL PSG V
Sbjct: 6   IHPISFLDTGEHVAALQEALGVEGFTVDAEELQHAAFGRSTQTALRELQERVGLTPSGNV 65

Query: 158 DSSTLEAMNVPVDLR 172
           D++T  A++  +D R
Sbjct: 66  DAATARAISERLDRR 80


>gi|190406552|gb|EDV09819.1| phenylalanine-tRNA ligase subunit [Saccharomyces cerevisiae
           RM11-1a]
 gi|259146168|emb|CAY79427.1| Frs2p [Saccharomyces cerevisiae EC1118]
 gi|323333711|gb|EGA75103.1| Frs2p [Saccharomyces cerevisiae AWRI796]
 gi|323337820|gb|EGA79062.1| Frs2p [Saccharomyces cerevisiae Vin13]
 gi|323348764|gb|EGA83004.1| Frs2p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323355239|gb|EGA87065.1| Frs2p [Saccharomyces cerevisiae VL3]
          Length = 503

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 17/90 (18%)

Query: 133 AFDAYVESAVKLFQMRHGLDP------SGMVDSSTLEAMNVPVDLRIRQLQVNLMR---- 182
            ++ Y E ++++F    GL        SGM     LE+M +P DLR+    ++L R    
Sbjct: 410 TYNPYTEPSMEIFSWHEGLQKWVEIGNSGMFRPEMLESMGLPKDLRVLGWGLSLERPTMI 469

Query: 183 ------IKKLLEQKMGLRYVLVNIPAASLE 206
                 I++LL  K+ L ++  N PAA L+
Sbjct: 470 KYKVQNIRELLGHKVSLDFIETN-PAARLD 498


>gi|14318497|ref|NP_116631.1| Frs2p [Saccharomyces cerevisiae S288c]
 gi|1174509|sp|P15625|SYFA_YEAST RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName:
           Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS
 gi|836732|dbj|BAA09216.1| cytoplasmic phenylalanyl-tRNA synthetase beta chain [Saccharomyces
           cerevisiae]
 gi|285811873|tpg|DAA12418.1| TPA: Frs2p [Saccharomyces cerevisiae S288c]
          Length = 503

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 17/90 (18%)

Query: 133 AFDAYVESAVKLFQMRHGLDP------SGMVDSSTLEAMNVPVDLRIRQLQVNLMR---- 182
            ++ Y E ++++F    GL        SGM     LE+M +P DLR+    ++L R    
Sbjct: 410 TYNPYTEPSMEIFSWHEGLQKWVEIGNSGMFRPEMLESMGLPKDLRVLGWGLSLERPTMI 469

Query: 183 ------IKKLLEQKMGLRYVLVNIPAASLE 206
                 I++LL  K+ L ++  N PAA L+
Sbjct: 470 KYKVQNIRELLGHKVSLDFIETN-PAARLD 498


>gi|151940741|gb|EDN59128.1| mitochondrial phenylalanyl-tRNA synthetase alpha subunit
           [Saccharomyces cerevisiae YJM789]
          Length = 503

 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 17/90 (18%)

Query: 133 AFDAYVESAVKLFQMRHGLDP------SGMVDSSTLEAMNVPVDLRIRQLQVNLMR---- 182
            ++ Y E ++++F    GL        SGM     LE+M +P DLR+    ++L R    
Sbjct: 410 TYNPYTEPSMEIFSWHEGLQKWVEIGNSGMFRPEMLESMGLPKDLRVLGWGLSLERPTMI 469

Query: 183 ------IKKLLEQKMGLRYVLVNIPAASLE 206
                 I++LL  K+ L ++  N PAA L+
Sbjct: 470 KYKVQNIRELLGHKVSLDFIETN-PAARLD 498


>gi|149181183|ref|ZP_01859682.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus sp. SG-1]
 gi|148851082|gb|EDL65233.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus sp. SG-1]
          Length = 347

 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           +RGG   LP   L  G+    V+ ++ +L+ +G   P  G    F    E AV  FQ ++
Sbjct: 185 ARGGSLSLP---LGEGDQGALVREIQTKLVKAGFSLPRYGADGIFGQETEMAVMRFQRKY 241

Query: 150 GLDPSGMVDSSTLEAMN 166
           GL   G+V   TL  +N
Sbjct: 242 GLRVDGLVGMQTLGKLN 258


>gi|261380022|ref|ZP_05984595.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria subflava NJ9703]
 gi|284797229|gb|EFC52576.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria subflava NJ9703]
          Length = 368

 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+SI
Sbjct: 48  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTNLGEHKIGAKAYNPVWHIPKSI 104


>gi|17228662|ref|NP_485210.1| lysin [Nostoc sp. PCC 7120]
 gi|17130513|dbj|BAB73124.1| lysin [Nostoc sp. PCC 7120]
          Length = 242

 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  L+E ++I    DP + +   F    E+AVK FQ R  + P G+V+ +T
Sbjct: 7   LRKGSKGSDVSELQE-ILIKLKFDPGR-IDGDFGNKTEAAVKQFQQRQSITPDGVVEINT 64

Query: 162 LEAMNVPVDLRI 173
             A+N  +  +I
Sbjct: 65  RNALNKAIQRQI 76


>gi|269213836|ref|ZP_06158207.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria cinerea ATCC 14685]
 gi|269145157|gb|EEZ71575.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria cinerea ATCC 14685]
          Length = 338

 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +G +     V VGR   QT +   +I    +NP W IP+S IQK
Sbjct: 47  QHVFINIPQQRLFLYTDGNLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKS-IQK 105

Query: 254 D 254
           +
Sbjct: 106 E 106


>gi|34497388|ref|NP_901603.1| hypothetical protein CV_1933 [Chromobacterium violaceum ATCC 12472]
 gi|34103244|gb|AAQ59607.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 301

 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R++++N+P A L   ++GK+     V VG++  QTP     I  I   P W +P+S IQ+
Sbjct: 35  RHLVLNLPQARLFLYQDGKLARIFPVAVGKMLTQTPTGSFDITGIYRAPSWHVPKS-IQE 93

Query: 254 DM 255
           +M
Sbjct: 94  EM 95


>gi|326502188|dbj|BAJ98922.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            H G+    + RL++ L   G L  P    +  FDA +E+A++ +Q   GL+ +G +D++
Sbjct: 55  CHFGDERQGLARLKDYLSRFGYLPAPPAKFNDMFDADMETAIRTYQHNFGLEATGQLDAA 114

Query: 161 TLEAMNVP 168
           T+  M  P
Sbjct: 115 TVAKMMSP 122


>gi|326488589|dbj|BAJ93963.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326534164|dbj|BAJ89432.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            H G+    + RL++ L   G L  P    +  FDA +E+A++ +Q   GL+ +G +D++
Sbjct: 55  CHFGDERQGLARLKDYLSRFGYLPAPPAKFNDMFDADMETAIRTYQHNFGLEATGQLDAA 114

Query: 161 TLEAMNVP 168
           T+  M  P
Sbjct: 115 TVAKMMSP 122


>gi|322384552|ref|ZP_08058232.1| spore cortex-lytic enzyme-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321150607|gb|EFX44084.1| spore cortex-lytic enzyme-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 216

 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L++G  S  V  L+ERL   G     KG++  +    + AV+ FQ  +GL  +G  DS+T
Sbjct: 32  LNIGTQSEHVLNLQERLSSLGYFK--KGITGYYGKITKEAVRDFQKAYGLSVTGSADSAT 89

Query: 162 LEAMN 166
           L  +N
Sbjct: 90  LAKLN 94


>gi|167465177|ref|ZP_02330266.1| cell wall hydrolase, SleB [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 216

 Score = 37.4 bits (85), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L++G  S  V  L+ERL   G     KG++  +    + AV+ FQ  +GL  +G  DS+T
Sbjct: 32  LNIGTQSEHVLNLQERLSSLGYFK--KGITGYYGKITKEAVRDFQKAYGLSVTGSADSAT 89

Query: 162 LEAMN 166
           L  +N
Sbjct: 90  LAKLN 94


>gi|23100366|ref|NP_693833.1| hypothetical protein OB2911 [Oceanobacillus iheyensis HTE831]
 gi|22778599|dbj|BAC14867.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 1115

 Score = 37.0 bits (84), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 27/162 (16%)

Query: 33  ASVLDEIINESYHSIVNDRFDNF------------LARVDMGIDSDIPIISKETIAQTEK 80
             ++D    E   S+ N  F N             L R+  G  +   +    T  Q  K
Sbjct: 583 TGIVDHTTEEKISSVYNSPFQNGKRHDGTVEIKEKLNRIGFGYITVSTLYGSFTETQVRK 642

Query: 81  AIAFYQDILSRGGWPELPI--------RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
             + Y  +L  G   E+ I         PL LGNS   +  L+E L   G      G+++
Sbjct: 643 FQSHY-GLLENGIADEVTIAKLDNIFNHPLQLGNSHPDIITLKENLNHLG----YDGIAI 697

Query: 133 A--FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           +  F  + E+ +K FQ  +GL  SG+ D  TL A+   V+ R
Sbjct: 698 SDYFGNWTETRLKQFQEDNGLPVSGIADEITLAAIEEAVENR 739


>gi|17230237|ref|NP_486785.1| hypothetical protein alr2745 [Nostoc sp. PCC 7120]
 gi|17131838|dbj|BAB74444.1| alr2745 [Nostoc sp. PCC 7120]
          Length = 305

 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 7/73 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           GWP L      +G  +  V +L++RL   G L  S  +   F    E A+K  Q R+G++
Sbjct: 231 GWPIL-----RVGMKNSEVTKLQQRLSQLGFLKGS--VDGYFGVQTEEALKAAQRRYGIE 283

Query: 153 PSGMVDSSTLEAM 165
           P G+   +T EA+
Sbjct: 284 PDGVAGGATWEAL 296


>gi|238061899|ref|ZP_04606608.1| cell wall hydrolase/autolysin [Micromonospora sp. ATCC 39149]
 gi|237883710|gb|EEP72538.1| cell wall hydrolase/autolysin [Micromonospora sp. ATCC 39149]
          Length = 388

 Score = 37.0 bits (84), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 31/69 (44%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +RP+  G+   +V  +R  L     L P    +  FD   E AV+ FQ   GL   G V 
Sbjct: 1   MRPIRTGDRGPAVSEIRAVLTGLDLLTPGSSAADEFDTETERAVRAFQQSRGLSVDGRVG 60

Query: 159 SSTLEAMNV 167
           + T  A++ 
Sbjct: 61  AETWRALDA 69


>gi|241759332|ref|ZP_04757438.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria flavescens SK114]
 gi|241320468|gb|EER56765.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria flavescens SK114]
          Length = 353

 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+S IQK
Sbjct: 33  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTNLGEHKIGAKAYNPVWHIPKS-IQK 91

Query: 254 D 254
           +
Sbjct: 92  E 92


>gi|225076549|ref|ZP_03719748.1| hypothetical protein NEIFLAOT_01597 [Neisseria flavescens
           NRL30031/H210]
 gi|224952120|gb|EEG33329.1| hypothetical protein NEIFLAOT_01597 [Neisseria flavescens
           NRL30031/H210]
          Length = 353

 Score = 37.0 bits (84), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+S IQK
Sbjct: 33  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTNLGEHKIGAKAYNPVWHIPKS-IQK 91

Query: 254 D 254
           +
Sbjct: 92  E 92


>gi|297804516|ref|XP_002870142.1| hypothetical protein ARALYDRAFT_493212 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315978|gb|EFH46401.1| hypothetical protein ARALYDRAFT_493212 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 362

 Score = 37.0 bits (84), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           D S+  S  FD  +ESA+ L+Q   GL  +G +D+ST+  M++P
Sbjct: 84  DGSESFSDVFDGPLESAISLYQENLGLPITGRLDTSTVSLMSLP 127


>gi|56963694|ref|YP_175425.1| peptidoglycan binding domain-containing protein [Bacillus clausii
           KSM-K16]
 gi|56909937|dbj|BAD64464.1| peptidoglycan-binding domain-containing protein [Bacillus clausii
           KSM-K16]
          Length = 355

 Score = 36.6 bits (83), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           P+H G  S  V++L++ L+ SG L+  +  S  +D+ V +AVK FQ  + L   G+    
Sbjct: 59  PIHEGEKSERVEKLQDYLVESGYLE-DQDRSHTYDSKVVAAVKQFQQDNNLLVDGIAGVQ 117

Query: 161 TLEAMNVPVD----LRIRQLQVNLMRIK 184
           TL +M V  +    L +  LQ  L +++
Sbjct: 118 TLGSMAVLQEGSDGLLVNMLQKKLAQLQ 145


>gi|218659271|ref|ZP_03515201.1| hypothetical protein RetlI_06191 [Rhizobium etli IE4771]
          Length = 211

 Score = 36.6 bits (83), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           V+ FQ   GL   G++  +T+ AM        +I +L+V  M   + L + +G RYV++N
Sbjct: 125 VEDFQKERGLKADGVIGQATVRAMTGGDTNASKIDKLEV-AMEQARWLPEDLGSRYVMIN 183

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQ 227
            PA       +GK  L   V+VG  + Q
Sbjct: 184 QPAYMAYYHNDGKEQLSMRVVVGGKNNQ 211


>gi|260424725|ref|ZP_05778983.1| endopeptidase, cell wall lytic activity [Dialister invisus DSM
           15470]
 gi|260402963|gb|EEW96510.1| endopeptidase, cell wall lytic activity [Dialister invisus DSM
           15470]
          Length = 246

 Score = 36.6 bits (83), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 3/63 (4%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG+S  +V+ L+ RL  +G L  + G    F+    SAVK FQ +H LD  G+V   T +
Sbjct: 28  LGDSGDAVKDLQRRLTQAGCLVRADGR---FNETTVSAVKKFQKKHNLDVDGVVGPVTYK 84

Query: 164 AMN 166
           A+ 
Sbjct: 85  ALT 87


Searching..................................................done


Results from round 2




>gi|254780350|ref|YP_003064763.1| hypothetical protein CLIBASIA_01175 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040027|gb|ACT56823.1| hypothetical protein CLIBASIA_01175 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 431

 Score =  601 bits (1550), Expect = e-170,   Method: Composition-based stats.
 Identities = 431/431 (100%), Positives = 431/431 (100%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60
           MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD
Sbjct: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII
Sbjct: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL
Sbjct: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF
Sbjct: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ
Sbjct: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT
Sbjct: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII
Sbjct: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420

Query: 421 PLPEDHPIDSD 431
           PLPEDHPIDSD
Sbjct: 421 PLPEDHPIDSD 431


>gi|315122226|ref|YP_004062715.1| hypothetical protein CKC_02390 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495628|gb|ADR52227.1| hypothetical protein CKC_02390 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 431

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 296/430 (68%), Positives = 360/430 (83%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60
           M+ YLKI  +++ FF YLIL MGL LV+ P+ A +LDEI  ESYH+ V++RFD  L+R D
Sbjct: 1   MISYLKIINVVHRFFTYLILLMGLFLVKYPVRADILDEITKESYHANVDNRFDTLLSRPD 60

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           +GIDS   I+S ETI  TEKAI FYQDI+SRGGW +L  RPL LG+SSV VQ+LRERLII
Sbjct: 61  IGIDSYAAIVSNETITNTEKAIVFYQDIVSRGGWQQLANRPLRLGDSSVLVQKLRERLII 120

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           SGDLD SKG S  FD+YVESAVK FQ RHGL P G+VD +TL+A+NVP DLR+RQL+VNL
Sbjct: 121 SGDLDSSKGFSSVFDSYVESAVKFFQARHGLFPDGVVDIATLKAINVPADLRLRQLRVNL 180

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +RI  LL++KMG RYVL+NIP+AS+EAVEN KV LRS  IVGR+DRQTPILHS+I+RIM 
Sbjct: 181 LRISNLLKRKMGSRYVLINIPSASMEAVENDKVALRSVAIVGRIDRQTPILHSKIDRIML 240

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NPYWVIPRSII+KD++ L+R+ P+YLK++NIH+I++KGKEV  E+VDWNS + P+FIFRQ
Sbjct: 241 NPYWVIPRSIIKKDLVELVRESPEYLKESNIHIINDKGKEVLPEDVDWNSADLPHFIFRQ 300

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           D GK NAMASTKIEFYS+NN+YMHDTPEP LF+   RFETSGCVRV+NIIDL+VWLLK+ 
Sbjct: 301 DSGKNNAMASTKIEFYSQNNSYMHDTPEPFLFSQTARFETSGCVRVKNIIDLNVWLLKNM 360

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           P WSR+ IEEV+KTRKTTPVKL  EV +HFVYISAWS KD ++QFRDD+YGLDNV++  I
Sbjct: 361 PGWSRHDIEEVIKTRKTTPVKLDKEVLIHFVYISAWSTKDLVVQFRDDVYGLDNVYIDSI 420

Query: 421 PLPEDHPIDS 430
           PLP  +P++S
Sbjct: 421 PLPGKYPVNS 430


>gi|150396039|ref|YP_001326506.1| peptidoglycan binding domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150027554|gb|ABR59671.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium medicae
           WSM419]
          Length = 443

 Score =  515 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 205/429 (47%), Positives = 279/429 (65%), Gaps = 9/429 (2%)

Query: 11  LYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPII 70
              F          +          L+EIIN       +D+FD   +R    + S+ P+ 
Sbjct: 12  RRAFLRSAATFGAAAWAGAASAQDALNEIINSPRRGSWDDQFDAKASRTATAVLSNTPVF 71

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPEL---PIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
             ETIA  ++AI  YQ I + GGWP +     + L LG +  +VQ+LR+RL+ISGDL  S
Sbjct: 72  GPETIALLQQAILDYQQIAAAGGWPMVNPASTQRLELGVNDPAVQQLRQRLMISGDLPQS 131

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            G+S +FD+YV+ AVK FQ RHGL   G++   +L+A+NV    R+ QL+ NL+R++  +
Sbjct: 132 AGISPSFDSYVDGAVKRFQARHGLPADGVIGEYSLKALNVDASTRLAQLETNLVRLQS-M 190

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
              +G RYV+VNIPAA +EAVENG+V LR T IVG++DRQ+PIL+S+I  ++ NPYW  P
Sbjct: 191 SGDLGRRYVMVNIPAAYIEAVENGRVALRHTAIVGKIDRQSPILNSKIYEVILNPYWTAP 250

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
           RSIIQKD+M L+R+DP YL+ N I ++D  G EV  E +DW + + PN +FRQDPGKINA
Sbjct: 251 RSIIQKDIMPLMRKDPTYLERNAIRLLDGNGNEVSPETIDWQAEKAPNLMFRQDPGKINA 310

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           M+STKI F++ +  YMHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLLK+TP WSR  
Sbjct: 311 MSSTKINFHNEHAVYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSTWLLKETPGWSRQQ 370

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP---- 423
           IE  +K+   TP+KLA EVPV+F YI+AWS KD ++QFRDDIY  D      +       
Sbjct: 371 IEGTIKSGVNTPIKLAEEVPVYFTYITAWSAKDRVVQFRDDIYQRDGAAELALQTTTGIE 430

Query: 424 -EDHPIDSD 431
               PID+D
Sbjct: 431 QSAGPIDAD 439


>gi|15964960|ref|NP_385313.1| hypothetical protein SMc01769 [Sinorhizobium meliloti 1021]
 gi|307301031|ref|ZP_07580800.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|307317765|ref|ZP_07597203.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|15074139|emb|CAC45786.1| Hypothetical protein SMc01769 [Sinorhizobium meliloti 1021]
 gi|306896527|gb|EFN27275.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306903986|gb|EFN34572.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 443

 Score =  515 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 206/429 (48%), Positives = 278/429 (64%), Gaps = 9/429 (2%)

Query: 11  LYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPII 70
              F          +          L+EIIN       +D+FD   +R    + S+ P+ 
Sbjct: 12  RRAFLRSAATFGAAAWAGAAGAQDALNEIINSPRRGSWDDQFDAKASRTATAVLSNTPVF 71

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPEL---PIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
             ETIA  ++AI  YQ I S GGWP +     + L +G +  SVQ+LR+RL+ISGDL  S
Sbjct: 72  GPETIAHLQQAIFDYQQIASAGGWPMVTPASTQRLEIGVTDPSVQQLRQRLMISGDLPQS 131

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            G+S +FD+YV+ AVK FQ RHGL   G++   +L+AMNV    R+ QL+ NL+R++  +
Sbjct: 132 AGISSSFDSYVDGAVKRFQARHGLPADGVIGEYSLKAMNVDASTRLAQLETNLVRLQS-M 190

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
              +G RYV+VNIPAA +EAVENG+V LR T IVG++DRQ+PIL+S+I  ++ NPYW  P
Sbjct: 191 SGDLGRRYVMVNIPAAYIEAVENGRVALRHTAIVGKIDRQSPILNSKIYEVILNPYWTAP 250

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
           RSIIQKD+M L+R+DP YL  N I ++D  G EV  E +DW + + PN +FRQDPGKINA
Sbjct: 251 RSIIQKDIMPLMRKDPTYLARNAIRLLDGNGNEVSPETIDWQAEKAPNLMFRQDPGKINA 310

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           M+STKI F++ +  YMHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLLK+TP W+R  
Sbjct: 311 MSSTKINFHNEHAVYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSTWLLKETPGWARQQ 370

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP---- 423
           IE  +K+   TP+KLA EVPV+F YI+AWS KD ++QFRDDIY  D      +       
Sbjct: 371 IEATIKSGVNTPIKLAEEVPVYFTYITAWSAKDRVVQFRDDIYQRDGAAELALQTTTGIE 430

Query: 424 -EDHPIDSD 431
               PID+D
Sbjct: 431 QSAGPIDAD 439


>gi|227821529|ref|YP_002825499.1| putative amidase [Sinorhizobium fredii NGR234]
 gi|227340528|gb|ACP24746.1| putative amidase [Sinorhizobium fredii NGR234]
          Length = 442

 Score =  515 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 203/428 (47%), Positives = 279/428 (65%), Gaps = 8/428 (1%)

Query: 11  LYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPII 70
              F          +          L E+IN       +D+FD   +R    + S+ P+ 
Sbjct: 12  RRAFLRSAATFGAAAWAGAASAQDALGELINSPRRGSWDDQFDAKASRTATAVLSNTPVF 71

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELP--IRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
             +TI   ++AI  YQ I++ GGWP++P     L LG +  SVQ+LR+RL++SGDL  S 
Sbjct: 72  GPQTIGHVQQAIFDYQQIVAAGGWPQVPQTGARLELGVTDPSVQQLRQRLMVSGDLPRSA 131

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
           G+S +FD+YV+ AVK FQ RHGL   G++   + +A+NV    R+ QL+ NL+R++  + 
Sbjct: 132 GISSSFDSYVDGAVKRFQARHGLPADGVIGEYSFKALNVDAATRLAQLETNLVRLQS-MS 190

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
             +G RYV+VNIPAA +EAVENG+V LR T IVG++DRQ+PIL+S+I  ++ NPYW  PR
Sbjct: 191 GDLGRRYVMVNIPAAYIEAVENGRVVLRHTAIVGKIDRQSPILNSKIYEVILNPYWTAPR 250

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI+QKD+M L+R+DP YL+ N I ++D  G EV  E VDWN+ + PN +FRQDPGKINAM
Sbjct: 251 SIVQKDIMPLMRKDPTYLERNAIRLLDGSGNEVSPETVDWNAEKAPNLMFRQDPGKINAM 310

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
           +STKI F++ ++ YMHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLLK+TP WSR  I
Sbjct: 311 SSTKINFHNEHSVYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSTWLLKETPGWSRQQI 370

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP----- 423
           E  +KT   TP+KLA EVPV+F YI+AWS KD ++QFRDDIY  D      +        
Sbjct: 371 EATIKTGVNTPIKLAEEVPVYFTYITAWSAKDRVVQFRDDIYQRDGAAELALQTTTGIEQ 430

Query: 424 EDHPIDSD 431
               ID+D
Sbjct: 431 SPGAIDAD 438


>gi|110633486|ref|YP_673694.1| twin-arginine translocation pathway signal [Mesorhizobium sp. BNC1]
 gi|110284470|gb|ABG62529.1| Twin-arginine translocation pathway signal [Chelativorans sp. BNC1]
          Length = 419

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 182/385 (47%), Positives = 260/385 (67%), Gaps = 1/385 (0%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
            +  D IIN     + +D+FD  ++     + S +P+++ +T    E+AIA Y +I++ G
Sbjct: 27  QNAFDAIINAPRRGVWDDQFDAQISSGRDRVISYLPVLNPQTAVHVEQAIAGYSNIVASG 86

Query: 93  GWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           GWP++P  + L LG     V+ LR RL++SGDL P  G+S AFD+YV+ A+K FQ+RHGL
Sbjct: 87  GWPQVPATKKLQLGVIDPDVEALRRRLMVSGDLSPRAGMSPAFDSYVDQALKRFQVRHGL 146

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
              G+    T  A+NV   +R+ QLQ NL R++++  +++G R+V+VNIPAA +EAVENG
Sbjct: 147 PADGVTGRYTFSALNVSAPVRLGQLQTNLGRLREMTSKQLGNRFVMVNIPAAQIEAVENG 206

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +V  R T +VG++DRQTP+L S+IN I+ NPYW  P SI++KD++ L+R+DP YL DNNI
Sbjct: 207 RVVSRHTAVVGKIDRQTPVLSSKINEIILNPYWNAPVSIVRKDIIPLMRKDPNYLTDNNI 266

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            MI   G EV    +DW++ E   + FRQDPGKINAMAS KI F +++  YMHDTP+  L
Sbjct: 267 RMIAPDGSEVDPLTIDWSTEEAAKYRFRQDPGKINAMASVKINFPNQHAVYMHDTPQQSL 326

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F +  RF +SGCVRV+N+ DL  WLL+DT  W R  IE  +++++   + +A  VPV+FV
Sbjct: 327 FRDQERFHSSGCVRVQNVRDLVAWLLRDTQGWDRRRIETTIQSQEDIHINVADPVPVYFV 386

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVH 416
           Y+SAWS  D ++ FRDDIYG D   
Sbjct: 387 YVSAWSTGDGVVHFRDDIYGFDGAE 411


>gi|209548779|ref|YP_002280696.1| peptidoglycan-binding protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534535|gb|ACI54470.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 433

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 202/404 (50%), Positives = 279/404 (69%), Gaps = 6/404 (1%)

Query: 15  FVYLILPMGLSLVEKPIHA-SVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISK 72
           F+     +G+S +  P  A S +D +IN       +D+FD   A R    + S+ PI+  
Sbjct: 15  FLASAATVGVSAIAAPAFAQSAIDTLINAPRRGNWDDQFDAKAASRTASAVVSNTPILGP 74

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           +++A  ++A+  YQ I + GGWPE+      L LG S  +VQ LR+RL I+GDL    G+
Sbjct: 75  QSLASAQQAVMQYQQIAAAGGWPEVNPGDQKLQLGVSHPAVQALRQRLAITGDLPREAGM 134

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           S AFD+YV+ AVK FQ RHGL   G++   TL+AMN+P D+R++QL  N++R++    + 
Sbjct: 135 SSAFDSYVDGAVKRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQLNTNIIRLQTF-PED 193

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +G R+V+VNIPAA +EAVE+G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI
Sbjct: 194 LGRRHVMVNIPAAYVEAVEDGTVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTSPRSI 253

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
           ++KD+M L+R+DP YL+ N I +ID KG EV  E +DWN  E PN +FRQDPGK NAMAS
Sbjct: 254 VEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVAPETIDWNG-EAPNLMFRQDPGKTNAMAS 312

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
           TKI FY++N  YMHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLL++TP W+R  +E+
Sbjct: 313 TKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSNWLLRETPGWNRQQMEQ 372

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           V+ +   TPVKLATEVPV+FVYISAW   D I+QFRDDIY +D 
Sbjct: 373 VIASGVNTPVKLATEVPVYFVYISAWGMPDGIVQFRDDIYQMDG 416


>gi|13476933|ref|NP_108502.1| hypothetical protein mlr8397 [Mesorhizobium loti MAFF303099]
 gi|14027695|dbj|BAB54288.1| mlr8397 [Mesorhizobium loti MAFF303099]
          Length = 422

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 193/405 (47%), Positives = 269/405 (66%), Gaps = 4/405 (0%)

Query: 13  CFFVYLILPMGLSLVEKPIHAS-VLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS 71
            FF+     +  ++V     A  V+ +I+  S     +D+FD   A     + S +PI S
Sbjct: 11  RFFLSGASLLAAAMVAGRASAQDVIGDILKSSARGNWDDQFDAR-ASEGGKVASTLPIFS 69

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            +T+A TE+A+A YQ+I+ +GGW E+P  + L LG     V  LR+RL++SGDL  S G+
Sbjct: 70  TQTVAFTEQAVAQYQNIVGQGGWVEVPATKKLELGVDDPDVVPLRKRLMVSGDLSQSAGI 129

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           S AFD+YV+SAVK FQ+RHGL   G +   T  AMNV   +R+ QLQ NL R+K+     
Sbjct: 130 STAFDSYVDSAVKRFQLRHGLPADGSMGKYTYAAMNVSAQIRLGQLQTNLQRLKE-KAGT 188

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +G RYVLV+IPAA +EAVEN +V LR T IVG++DRQTPI++S+IN I+ NPYW  P SI
Sbjct: 189 LGSRYVLVDIPAAQIEAVENDRVVLRHTAIVGKIDRQTPIVNSKINEIIVNPYWNAPVSI 248

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
           ++KD++ L+R+DP YLK+++I +    G EV    VDW++ +   + FRQDPG  NAMAS
Sbjct: 249 VRKDIIPLMRKDPNYLKNSHIRLFAPDGSEVDPMNVDWSTDDAAKYRFRQDPGSENAMAS 308

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            KI F S +  YMHDTP+  LF  ++RF++SGCVRV+N+ DL  W+L+DTP W R H E 
Sbjct: 309 VKINFPSPDGVYMHDTPQQSLFGKMMRFDSSGCVRVQNVRDLVTWILRDTPGWDRQHFEA 368

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            +KT + TP+++   VPVHF+Y+SAWS    ++QFRDD+Y LD  
Sbjct: 369 AIKTGQNTPIQVTNPVPVHFLYLSAWSTGPGVVQFRDDVYALDGA 413


>gi|114704835|ref|ZP_01437743.1| hypothetical protein FP2506_07861 [Fulvimarina pelagi HTCC2506]
 gi|114539620|gb|EAU42740.1| hypothetical protein FP2506_07861 [Fulvimarina pelagi HTCC2506]
          Length = 444

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 183/413 (44%), Positives = 261/413 (63%), Gaps = 2/413 (0%)

Query: 5   LKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGID 64
           +        F       +GL +       S LD ++        +D+FD   +     + 
Sbjct: 7   IPGRTTRRAFLSGTTAALGLGMTGFASAQSGLDGLLGARGRGNWDDQFDTRGSSARE-VS 65

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGD 123
           S  PI S++T+  T+ A+  Y  I+++GGWP +P R  L LG  +  V+ LR+RL ISGD
Sbjct: 66  SLNPIFSQQTLYSTQAAMQTYNQIVAQGGWPTVPARYVLKLGEVTPDVEVLRQRLAISGD 125

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           L P    S AFD YVE+AVK FQ RHGL   G+V     +A+NVP DLR+ QLQ N  R+
Sbjct: 126 LSPQASRSPAFDTYVEAAVKRFQARHGLPADGVVGEHAYKALNVPADLRLFQLQTNAARL 185

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +  L++++  RYV+VNIPAA++EAVENG++  R T +VG+VDRQTPIL S+I  +  NPY
Sbjct: 186 QNQLQEQLPYRYVMVNIPAAAIEAVENGQIVQRHTAVVGKVDRQTPILTSKITNLNLNPY 245

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P SI++KD++ L+RQDP YL+ N IH+ +  G+EV  + +DW+S E  +++FRQ+PG
Sbjct: 246 WHAPASIVRKDIIPLVRQDPTYLQRNGIHIFNGNGQEVPPQSIDWSSDEAVSYLFRQNPG 305

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             +AMAS KI F + +  YMHDTP+  LF+ ++RFE+SGCVRV+N+ DL VWL +D P W
Sbjct: 306 PNSAMASVKINFPNEHAVYMHDTPQKGLFSELMRFESSGCVRVQNVRDLIVWLARDEPNW 365

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           +R  IE V+  R    + LA  VPV+F Y++ W+   +++QFRDDIY  D   
Sbjct: 366 NRQAIERVISARSREDIDLANPVPVYFTYVTGWATDPNVVQFRDDIYHRDGAE 418


>gi|153009858|ref|YP_001371073.1| peptidoglycan-binding domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561746|gb|ABS15244.1| Peptidoglycan-binding domain 1 protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 433

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 193/402 (48%), Positives = 267/402 (66%), Gaps = 3/402 (0%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
              +     ++V        L ++I+ S      D+FD   A     + ++ P++S +T+
Sbjct: 24  TAGLSVAASAMVSSAYAQQALTDVISSSRRGNWADQFDAR-ATGGQRVATNQPVLSPQTV 82

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
              + AIA Y DI  RGGWP +P    L +G +  SVQ LR+RL+ISGDL    GLS +F
Sbjct: 83  GNLQTAIAQYTDIAGRGGWPSVPGNTKLQIGVTDPSVQALRKRLMISGDLPQEAGLSSSF 142

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GL 193
           D YV++AVK FQ RHGL   G++   T  AMNV  + R+ QLQ NL R+  L  Q +   
Sbjct: 143 DTYVDAAVKRFQSRHGLPADGVMGQFTYAAMNVDANTRLGQLQTNLQRLSPLANQGLQEQ 202

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R+V+VNIPAA +EAVE G V  R T +VG++DRQTPIL+S+I+ ++ NPYW  P+SIIQK
Sbjct: 203 RFVMVNIPAARIEAVEGGSVMQRHTAVVGKIDRQTPILNSKIHEVILNPYWTAPKSIIQK 262

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           D++ L+R+DPQYL  N I + D+ G+EV  E +DWN+ +    +FRQDPGKINAM+STKI
Sbjct: 263 DIIPLMRKDPQYLAKNKIRLYDQSGQEVAPESIDWNTDDAVKLMFRQDPGKINAMSSTKI 322

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F+++   YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K
Sbjct: 323 NFHNQYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTAGWDRQNIESTIK 382

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           +   TP++LA  VP+HFVYI+AWS  D ++QFRDDIY +D  
Sbjct: 383 SGTNTPIQLADPVPLHFVYITAWSTGDGVVQFRDDIYKMDGA 424


>gi|90419407|ref|ZP_01227317.1| putative peptidoglycan-binding protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336344|gb|EAS50085.1| putative peptidoglycan-binding protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 447

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 188/407 (46%), Positives = 259/407 (63%), Gaps = 2/407 (0%)

Query: 11  LYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPII 70
              F +         L       + L E++        +D+FD   + V   + S+ P+ 
Sbjct: 15  RRRFVLGTAAASAAMLPGAAFAQNALGELLQAPTRGNWDDQFDTRGSNVR-QVASNSPVF 73

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           S+ TI   ++AI  Y  I+  GGWP +P    L +G  S +V  LR+RL I+GDL  + G
Sbjct: 74  SENTIYSLQEAINSYSAIVQGGGWPMVPEGETLKIGVQSRTVPVLRQRLAIAGDLGNNAG 133

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            S AFD YV++AVK FQ RHGL   G+V   T +AMNV  DLR+ QLQ NL R+++ L  
Sbjct: 134 GSPAFDTYVDAAVKRFQARHGLPADGVVSGHTYKAMNVGADLRLGQLQTNLQRLREKLAT 193

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +G RYV+VNIPAAS+EAVENG+V  R T +VG+VDRQTPIL SRI  +  NPYW  P S
Sbjct: 194 DLGQRYVVVNIPAASIEAVENGRVVQRHTAVVGKVDRQTPILDSRITNLNLNPYWHAPVS 253

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I++KD++ L+++DP YL+ N I + D  G+E+  + +DWN+ E   ++FRQDPGKINAMA
Sbjct: 254 IVRKDIIPLMQKDPTYLERNAIRIFDGNGQEIPPQTIDWNTEEAVKYLFRQDPGKINAMA 313

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
           S KI F + +  YMHDTP+  LF+ ++RFE+SGCVRV+N+ DL VWL +D P W R  IE
Sbjct: 314 SVKINFPNPHAVYMHDTPQQSLFSELMRFESSGCVRVQNVRDLIVWLARDVPGWDRQRIE 373

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           +V+  R+   + L   VPVHF Y++AW+   +++QFRDDIY  D V 
Sbjct: 374 QVIAARERQDIDLLNPVPVHFTYVTAWATDPTVVQFRDDIYHRDGVE 420


>gi|239831589|ref|ZP_04679918.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239823856|gb|EEQ95424.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 438

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 194/407 (47%), Positives = 269/407 (66%), Gaps = 3/407 (0%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
              +     ++V       VL ++I        +D+FD   A     + ++ P++S +T+
Sbjct: 29  TAGLSVAASAMVSSAYAQQVLTDVIAAPRRGNWDDQFDAR-ATGGQRVATNQPVLSPQTV 87

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
              + AIA Y DI  RGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS +F
Sbjct: 88  GNLQTAIAQYTDIAGRGGWPSVPGNAKLQIGVTDPAVQALRKRLMISGDLPQEAGLSSSF 147

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GL 193
           D YV++AVK FQ RHGL   G++   T  AMNV  + R+ QLQ NL R+  L +Q M   
Sbjct: 148 DTYVDAAVKRFQSRHGLPADGVMGQFTYAAMNVDANTRLGQLQTNLQRLSPLADQGMQEQ 207

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R+V+VNIPAA +EAVE G V  R T +VG++DRQTPIL+S+I+ ++ NPYW  P+SIIQK
Sbjct: 208 RFVMVNIPAARIEAVEGGSVVQRHTAVVGKIDRQTPILNSKIHEVILNPYWTAPKSIIQK 267

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           D++ L+R+DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI
Sbjct: 268 DIIPLMRKDPQYLAKNKIRLYDQSGQEVAPETVDWNTDDAVKLMFRQDPGKINAMSSTKI 327

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F++++  YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R  IE  +K
Sbjct: 328 NFHNQHQVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTAGWDRQTIENTIK 387

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +   TP+++A  VP+HFVYISAWS  D ++QFRDDIY +D      +
Sbjct: 388 SGTNTPIQVADPVPLHFVYISAWSTGDGVVQFRDDIYKMDGATALAL 434


>gi|222148202|ref|YP_002549159.1| hypothetical protein Avi_1609 [Agrobacterium vitis S4]
 gi|221735190|gb|ACM36153.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 410

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 194/385 (50%), Positives = 273/385 (70%), Gaps = 2/385 (0%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           +  S +DE+IN       +D+FD   +R    + S+ P++S   +   + AI+ YQ I++
Sbjct: 1   MAQSAVDELINARSRGNWDDQFDAQTSRAVASVTSNSPMLSATNLPNLQLAISAYQQIVA 60

Query: 91  RGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           +GGWP++ P   L LG+    VQ+LR+RL+ISGDL    G+S +FD YV+ AVK FQ RH
Sbjct: 61  QGGWPQVNPSVKLKLGSIDPVVQQLRQRLMISGDLGQEAGMSNSFDTYVDGAVKRFQARH 120

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G +   TL+AMN+  D+R+ QL  NL+R++  +   +G RYV+VNIP+ S+EAVE
Sbjct: 121 GLPTDGALGEYTLKAMNISADVRLNQLNTNLVRLQA-MSGDLGNRYVMVNIPSMSIEAVE 179

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           N +V LR+  +VGR+DR T  ++S+I  ++ NPYW  PRSI++KD++ L+R+DP YL  N
Sbjct: 180 NDRVALRTNAVVGRIDRPTHSINSKIYEVILNPYWTAPRSIVEKDIVPLMRKDPTYLTRN 239

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           NI + D KG+EV  E VDWN+P+ PN +FRQDPGKINAMASTKI F++ NN Y+HDTP+ 
Sbjct: 240 NIRLFDGKGQEVAPETVDWNAPKAPNLMFRQDPGKINAMASTKINFHNPNNEYLHDTPQQ 299

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LFN ++RFE+SGC+RV+N+ DL  WLL+DTP W+R  IE V+ TR+   +KL+ EVPV+
Sbjct: 300 GLFNKLMRFESSGCMRVQNVRDLITWLLRDTPGWNRQEIERVISTRQNNVIKLSQEVPVY 359

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDN 414
            VYI+AWS KD+++QFRDDIY  D 
Sbjct: 360 IVYITAWSAKDNVVQFRDDIYKRDG 384


>gi|241204000|ref|YP_002975096.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857890|gb|ACS55557.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 433

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 202/407 (49%), Positives = 274/407 (67%), Gaps = 5/407 (1%)

Query: 11  LYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPI 69
              F          +L       S LD +IN       +D+FD   A R    + S+ PI
Sbjct: 12  RRAFLASAATVGASALAAPAFAQSALDTLINAPRRGNWDDQFDAKAASRTATAMVSNTPI 71

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPS 127
           +  +++A  ++AI  YQ I + GGWPE+      L LG SS +VQ LR+RL I+GDL   
Sbjct: 72  LGPQSVASAQQAIMQYQQIAAAGGWPEVNPGDQRLQLGVSSPAVQALRQRLAITGDLPRE 131

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD+YV+ AVK FQ RHGL   G++   TL+AMN+P D+R++QL  N++R++   
Sbjct: 132 AGLSNAFDSYVDGAVKRFQARHGLPADGVLGEFTLKAMNIPADVRLQQLNTNVVRLQTF- 190

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            + +G R+++VNIPAA +EAVE+G V  R T +VGR+ R T +++S+I  ++ NPYW  P
Sbjct: 191 PEDLGRRHLMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAP 250

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
           RSI++KD+M L+R+DP YL+ N I ++D KG EV  E +DWN  E PN +FRQDPGK NA
Sbjct: 251 RSIVEKDIMPLMRKDPTYLEKNAIRLLDGKGNEVAPETIDWNG-EAPNLMFRQDPGKTNA 309

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           MASTKI FY++N  YMHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLL++TP W+R  
Sbjct: 310 MASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSNWLLRETPGWNRQQ 369

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +E+V+ T   TPVKLATEVPV+FVYISAW   D I+QFRDDIY +D 
Sbjct: 370 MEQVIATGVNTPVKLATEVPVYFVYISAWGMPDGIVQFRDDIYQMDG 416


>gi|86357145|ref|YP_469037.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CFN 42]
 gi|86281247|gb|ABC90310.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CFN 42]
          Length = 433

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 202/407 (49%), Positives = 275/407 (67%), Gaps = 5/407 (1%)

Query: 11  LYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPI 69
              F          ++    +  S LD +IN       +D+FD   A R    + S+ PI
Sbjct: 12  RRAFLASAATIGAGAMAAPALAQSALDTLINAPRRGNWDDQFDAKAASRTATAVVSNTPI 71

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPS 127
           +  +++A  ++AI  YQ I + GGWPE+      L LG SS +VQ LR+RL I+GDL   
Sbjct: 72  LGPQSVASAQQAIMQYQQIAAAGGWPEVNPGDQRLQLGVSSPAVQVLRQRLAITGDLPRE 131

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            G+S AFD+YV+ AVK FQ RHGL   G++   TL+AMN+P D+R++QL  NL+R++   
Sbjct: 132 AGMSNAFDSYVDGAVKRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQLNTNLVRLQTF- 190

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            + +G R+++VNIPAA +EAVE+G V  R T +VGR+ R T +++S+I  ++ NPYW  P
Sbjct: 191 PEDLGRRHLMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAP 250

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
           RSI++KD+M L+R+DP YL+ N I +ID KG EV  E +DWN  E PN  FRQDPGKINA
Sbjct: 251 RSIVEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVSPETIDWNG-EAPNLQFRQDPGKINA 309

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           MASTKI FY++N  YMHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  
Sbjct: 310 MASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLSTWLLRETPGWSRQQ 369

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +E+V+ +   TP+KLATEVPV+FVYISAW   D I+QFRDDIY +D 
Sbjct: 370 MEQVIASGVNTPIKLATEVPVYFVYISAWGMPDGIVQFRDDIYQMDG 416


>gi|222085506|ref|YP_002544036.1| peptidoglycan binding protein [Agrobacterium radiobacter K84]
 gi|221722954|gb|ACM26110.1| peptidoglycan binding protein [Agrobacterium radiobacter K84]
          Length = 437

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 206/419 (49%), Positives = 281/419 (67%), Gaps = 8/419 (1%)

Query: 13  CFFVYLILPMGLSLVEKPIH----ASVLDEIINESYHSIVNDRFDNFLARVDMG-IDSDI 67
            FF+      G++ +  P       + LD +IN       +D+FD   A      + S+ 
Sbjct: 13  RFFLRSAATFGVAALAAPALAQQDQTPLDALINNRARGNWDDQFDAKAAARTAAAVQSNT 72

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLD 125
           PI+  +++   ++AIA YQ+I + GGWP++      L LG +  +VQ LR+ L+++GDL 
Sbjct: 73  PILGPDSVPNIQQAIAQYQNIAANGGWPQITPGDQKLQLGVTDGAVQALRQHLMVTGDLP 132

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
              G+S AFD+YV+ AVK FQ RHGL P G++   TL+AMN+P ++R++QL  NL+R++ 
Sbjct: 133 REAGISSAFDSYVDGAVKRFQARHGLPPDGVLGDFTLKAMNIPANVRLQQLNTNLVRLQT 192

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                +G R+V+VNIPA  +EAVE+G+V LR   IVGR  R T +++S+I  ++ NPYW 
Sbjct: 193 F-PADLGRRHVMVNIPATRVEAVEDGQVALRHEAIVGRESRPTHLINSKIYEVILNPYWT 251

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            PRSII KD+M L+R+DP YL  NNI ++D KG+EV  E +DWNS + PN +FRQDPGK 
Sbjct: 252 APRSIIIKDIMPLMRKDPTYLSKNNIRLLDGKGQEVAPETIDWNSDKAPNLMFRQDPGKT 311

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NAMASTKI FY+ NN YMHDTPE  LFN ++RF++SGCVRV+N+ DL  WLL DTP W R
Sbjct: 312 NAMASTKINFYNPNNEYMHDTPEQGLFNKLMRFDSSGCVRVQNVRDLATWLLTDTPGWPR 371

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
            HIE+V+ TR  TP+KLATEVPV+FVYISAWS  D I+QFRDDIY LD      +   +
Sbjct: 372 QHIEQVISTRVNTPIKLATEVPVYFVYISAWSAADGIVQFRDDIYNLDGNSQLALDTTQ 430


>gi|190891191|ref|YP_001977733.1| peptidoglycan binding protein (involved in cell wall degradation)
           [Rhizobium etli CIAT 652]
 gi|190696470|gb|ACE90555.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CIAT 652]
 gi|327192107|gb|EGE59084.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CNPAF512]
          Length = 434

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 202/385 (52%), Positives = 270/385 (70%), Gaps = 5/385 (1%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            S LD ++N       +D+FD   A R    + S+ PI+  +++A  ++AI  YQ I + 
Sbjct: 35  QSALDGLLNAPRRGNWDDQFDAKAASRTASAVVSNTPILGPQSVASAQQAIMQYQQIAAA 94

Query: 92  GGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           GGWPE+      L LG S  +VQ LR+RL I+GDL    G+S AFD+YV+ AVK FQ RH
Sbjct: 95  GGWPEVNPGDQRLQLGVSHPAVQALRQRLAITGDLPREAGMSSAFDSYVDGAVKRFQARH 154

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G++   TL+AMN+P D+R++QL  NL+R++    + +G R+V+VNIPAA +EAVE
Sbjct: 155 GLPSDGVLGEFTLKAMNIPADVRLQQLNTNLVRLQTF-PEDLGRRHVMVNIPAAYVEAVE 213

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ N
Sbjct: 214 DGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKN 273

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            I +ID KG EV  E VDWN  E PN  FRQDPGKINAMASTKI FY++N  YMHDTP+ 
Sbjct: 274 AIRLIDGKGNEVAPETVDWNG-EAPNLQFRQDPGKINAMASTKINFYNKNGEYMHDTPQQ 332

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  +E+V+ T   TP+KLATEVPV+
Sbjct: 333 GLFNKLMRFESSGCVRVQNVRDLTNWLLRETPGWSRQQMEQVIATGVNTPIKLATEVPVY 392

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDN 414
           FVYISAW   D I+QFRDDIY +D 
Sbjct: 393 FVYISAWGMPDGIVQFRDDIYQMDG 417


>gi|116251385|ref|YP_767223.1| hypothetical protein RL1618A [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256033|emb|CAK07114.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 433

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 204/407 (50%), Positives = 274/407 (67%), Gaps = 5/407 (1%)

Query: 11  LYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPI 69
              F          +L       S LD +IN       +D+FD   A R    + S+ PI
Sbjct: 12  RRAFLASAATVGASALAAPAFAQSALDTLINAPRRGNWDDQFDAKAASRTATAMVSNTPI 71

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPS 127
           +  +++A  ++AI  YQ I + GGWPE+      L LG SS SVQ LR+RL I+GDL   
Sbjct: 72  LGPQSVASAQQAIMQYQQIAAAGGWPEVNPGDQRLQLGVSSPSVQALRQRLAITGDLPRE 131

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD+YV+ AVK FQ RHGL   G++   TL+AMN+P D+R++QL  N++R++   
Sbjct: 132 AGLSNAFDSYVDGAVKRFQARHGLPADGVLGEFTLKAMNIPADVRLQQLNTNVVRLQTF- 190

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            + +G R+++VNIPAA +EAVE+G V  R T +VGR+ R T +++S+I  ++ NPYW  P
Sbjct: 191 PEDLGRRHLMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAP 250

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
           RSI++KD+M L+R+DP YL+ N I ++D KG EV  E VDWN  E PN +FRQDPGKINA
Sbjct: 251 RSIVEKDIMPLMRKDPTYLEKNAIRLLDGKGNEVAPETVDWNG-EAPNLMFRQDPGKINA 309

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           MASTKI FY++N  YMHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  
Sbjct: 310 MASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLTNWLLRETPGWSRQQ 369

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +E+V+ T   TP+KLA EVPV+FVYISAW   D I+QFRDDIY +D 
Sbjct: 370 MEQVIATGVNTPIKLAAEVPVYFVYISAWGMPDGIVQFRDDIYQMDG 416


>gi|328543533|ref|YP_004303642.1| Twin-arginine translocation pathway signal [polymorphum gilvum
           SL003B-26A1]
 gi|326413277|gb|ADZ70340.1| Twin-arginine translocation pathway signal [Polymorphum gilvum
           SL003B-26A1]
          Length = 415

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 171/403 (42%), Positives = 261/403 (64%), Gaps = 5/403 (1%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           +   G+    + + AS L+ +   +      DRFD  +  ++  I S  P +S ET    
Sbjct: 5   LAGFGIGAGVQSVTASPLEALRQYNQRIEWEDRFDATMESLE-AIKSSKPTLSPETADYL 63

Query: 79  EKAIAFYQDILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             AI  YQ I+ +GGW ++      L +G    SV  LR RLI SGDL+ + GLS  FD+
Sbjct: 64  AAAINRYQFIVQQGGWGKVQSSRHGLRIGAQDASVVALRRRLIASGDLEQTAGLSDTFDS 123

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
           YV++AV+ FQ+RHGL P G+V  +T+ A+NVP ++R++QL+ NL+R++  +   +G RYV
Sbjct: 124 YVDAAVRRFQVRHGLIPDGVVGQTTVVALNVPAEVRLQQLETNLVRLRS-MSGFLGDRYV 182

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VNIPAA +EAVENG+V  R T +VG++DRQTPIL+S+I  + FNPYW +P SII+KD++
Sbjct: 183 MVNIPAAEIEAVENGRVRSRHTAVVGKIDRQTPILNSKIYELNFNPYWTVPVSIIRKDLI 242

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
             +++DP+YL  N I + D K  E+  +++DWN+ E   + FRQ+PG IN++ S +I F+
Sbjct: 243 PKMKEDPEYLAKNKIRIFDWKNNELSWQQIDWNTDEATQYQFRQEPGDINSLGSVRINFH 302

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD-TPTWSRYHIEEVVKTR 375
           +++  Y+HDTP   LF +  RF +SGCVRV+N+ +L  W+L+  TP WSR  ++E ++  
Sbjct: 303 NQHQVYLHDTPSKSLFGSDYRFHSSGCVRVQNVRELVTWMLESTTPDWSRARVDETIRMG 362

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
               VKL T+VP++  Y++AWS  + I+ FRDDIY  D ++  
Sbjct: 363 VREDVKLKTQVPLYMTYVTAWSTDEGIVHFRDDIYNRDGLYAN 405


>gi|15888502|ref|NP_354183.1| hypothetical protein Atu1164 [Agrobacterium tumefaciens str. C58]
 gi|15156204|gb|AAK86968.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 443

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 192/380 (50%), Positives = 274/380 (72%), Gaps = 3/380 (0%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
           ++++  S     +D+FD   +R  +G+ S+ P++ +E     ++AI  YQ I+  GGWP+
Sbjct: 38  NDLMGSSRRGNWDDQFDANTSRSAVGVVSNNPVLGREAPVYMQQAIMQYQQIVQNGGWPD 97

Query: 97  LPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +P   + L +G S  SVQ LR+RL++SGDL    G+S AFD+YV+ A+K FQ RHGL   
Sbjct: 98  VPTSQQRLQIGVSDPSVQALRQRLMVSGDLPREAGISSAFDSYVDGALKRFQARHGLPAD 157

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+    T +A+NV   +R+ QLQ NL+RI+  +   +G R+++VNIPAA++EAVEN +V 
Sbjct: 158 GVSGEYTTKALNVSAQIRLAQLQTNLVRIQS-MSGDLGQRHMMVNIPAAAIEAVENERVV 216

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           LR+T +VGR  R T +++S++  ++ NPYW  PRSI++KD++ L+++DP YL+ NNI +I
Sbjct: 217 LRNTAVVGRASRPTHVINSKVYEVILNPYWTAPRSIVEKDIVPLMQKDPTYLERNNIRLI 276

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           D KG+EV    VDW +P+ PN +FRQDPGKINAM+STKI F++ NN YMHDTP+  LFN 
Sbjct: 277 DGKGQEVSPTTVDWFAPKAPNLMFRQDPGKINAMSSTKINFHNPNNEYMHDTPQQGLFNK 336

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
           ++RFE+SGCVRV+N+ DL  WLL+DTP WSR  +E V+ +R  TP+KLA EVPV+FVYI+
Sbjct: 337 LMRFESSGCVRVQNVRDLTSWLLRDTPGWSRQEMERVIASRVNTPIKLAQEVPVYFVYIT 396

Query: 395 AWSPKDSIIQFRDDIYGLDN 414
           AWS KD ++QFRDDIYG D 
Sbjct: 397 AWSAKDGVVQFRDDIYGKDG 416


>gi|325292539|ref|YP_004278403.1| hypothetical protein AGROH133_05364 [Agrobacterium sp. H13-3]
 gi|325060392|gb|ADY64083.1| hypothetical protein AGROH133_05364 [Agrobacterium sp. H13-3]
          Length = 443

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 193/380 (50%), Positives = 274/380 (72%), Gaps = 3/380 (0%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
           ++++  S     +D+FD   +R  +G+ S+ P++ +E     ++AI  YQ I+  GGWP+
Sbjct: 38  NDLMGSSRRGNWDDQFDANSSRSAVGVVSNNPVLGREAPVYMQQAIMQYQQIVQNGGWPD 97

Query: 97  LPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +P+  + L +G S  SVQ LR+RL++SGDL    G+S AFD+YV+ A+K FQ RHGL   
Sbjct: 98  VPVTQQRLQIGVSDPSVQALRQRLMVSGDLPREAGISSAFDSYVDGALKRFQARHGLPAD 157

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+    T +A+NV   +R+ QLQ NL+RI+  +   +G R+++VNIPAA++EAVEN +V 
Sbjct: 158 GVSGEYTTKALNVSAQIRLAQLQTNLVRIQS-MSGDLGQRHLMVNIPAAAIEAVENERVV 216

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           LR+T +VGR  R T +++S+I  ++ NPYW  PRSI++KD++ L+++DP YL+ NNI +I
Sbjct: 217 LRNTAVVGRASRPTHVINSKIYEVILNPYWTAPRSIVEKDIVPLMQKDPTYLERNNIRLI 276

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           D KG+EV    VDW +P+ PN +FRQDPGKINAM+STKI F++ NN YMHDTP+  LFN 
Sbjct: 277 DGKGQEVSPTAVDWFAPKAPNLMFRQDPGKINAMSSTKINFHNPNNEYMHDTPQQGLFNK 336

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
           ++RFE+SGCVRV+N+ DL  WLL+DTP WSR  +E V+ TR  TP+KLA EVPV+FVYI+
Sbjct: 337 LMRFESSGCVRVQNVRDLTSWLLRDTPGWSRQEMERVIATRVNTPIKLAQEVPVYFVYIT 396

Query: 395 AWSPKDSIIQFRDDIYGLDN 414
           AWS KD ++QFRDDIY  D 
Sbjct: 397 AWSAKDGVVQFRDDIYEKDG 416


>gi|260466848|ref|ZP_05813032.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259029350|gb|EEW30642.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 417

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 188/388 (48%), Positives = 262/388 (67%), Gaps = 3/388 (0%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
            +     V+ +I+  S     +D+FD   A     + S +PI S +T+A TE+A+A YQ+
Sbjct: 22  GRASAQDVIGDILKSSARGNWDDQFDAR-ASEGGKVASTLPIFSPQTVAFTEQAVAQYQN 80

Query: 88  ILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           I+ +GGW ++P  + L LG     V  LR+RL+I+GDL  S G+S AFD+YV+SAVK FQ
Sbjct: 81  IVGQGGWVDVPATKKLELGVDDPDVVPLRKRLMIAGDLSQSAGISTAFDSYVDSAVKRFQ 140

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           +RHGL   G +   T  AMNV   +R+ QLQ NL R+K+     +G RYVLV+IPAA +E
Sbjct: 141 LRHGLPADGSMGKYTYAAMNVSAQIRLGQLQTNLQRLKE-KAGTLGSRYVLVDIPAAQIE 199

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
           AVEN +V LR T IVG++DRQTPI++S+IN I+ NPYW  P SI++KD++ L+R+DP YL
Sbjct: 200 AVENDRVVLRHTAIVGKIDRQTPIVNSKINEIIVNPYWNAPVSIVRKDIIPLMRKDPDYL 259

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
           K+++I +    G EV    VDW++ +   + FRQDPG  NAMAS KI F S +  YMHDT
Sbjct: 260 KNSHIRLFAPDGSEVDPMNVDWSTDDAAKYRFRQDPGSENAMASVKINFPSPDGVYMHDT 319

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P+  LF  ++RF++SGCVRV+N+ DL  W+L+DTP W R H E  +KT + TP+++   V
Sbjct: 320 PQQSLFGKMMRFDSSGCVRVQNVRDLVTWILRDTPGWDRQHFEAAIKTGQNTPIQVTNPV 379

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           PVHF+Y+SAWS    ++QFRDD+Y LD 
Sbjct: 380 PVHFLYLSAWSTGPGVVQFRDDVYALDG 407


>gi|319784167|ref|YP_004143643.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170055|gb|ADV13593.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 417

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 185/384 (48%), Positives = 259/384 (67%), Gaps = 3/384 (0%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
              V+ +I+  S     +D+FD   A     + S +PI S +T+A TE+A+  YQ+I+ +
Sbjct: 26  AQDVIGDILKSSARGNWDDQFDAR-ASEGGKVASTLPIFSPQTVAFTEQAVGQYQNIVGQ 84

Query: 92  GGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GGW E+P  + L LG     V  LR+RL++SGDL  S G+S AFD+YV+SAVK FQ+RHG
Sbjct: 85  GGWVEVPATKKLQLGVDDPDVVPLRKRLMVSGDLSQSAGISTAFDSYVDSAVKRFQLRHG 144

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G +   T  AMNV   +R+ QLQ NL R+++     +G RYVLV+IPAA +EAVEN
Sbjct: 145 LPADGSMGKYTYAAMNVSAQIRLGQLQTNLQRLRE-KAGTLGSRYVLVDIPAAQVEAVEN 203

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
            +V LR T IVG++DRQTPI++S+I  I+ NPYW  P SI++KD++ L+R++P YLK+++
Sbjct: 204 DRVVLRHTAIVGKIDRQTPIVNSKITEIIVNPYWNAPVSIVRKDIIPLMRKNPDYLKNSH 263

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
           I +    G EV    VDW++ +   + FRQDPG  NAMAS KI F S +  YMHDTP+  
Sbjct: 264 IRLFAPDGSEVDPMNVDWSTDDAAKYRFRQDPGSENAMASVKINFPSPDGVYMHDTPQQS 323

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LF  ++RF++SGCVRV+N+ DL  W+L+DTP W R H E  +KT + TP+++   VPVHF
Sbjct: 324 LFGKMLRFDSSGCVRVQNVRDLVTWILRDTPGWDRQHFEAAIKTGENTPIQVTNPVPVHF 383

Query: 391 VYISAWSPKDSIIQFRDDIYGLDN 414
           +Y+SAWS    ++QFRDD+Y LD 
Sbjct: 384 LYLSAWSTGPGVVQFRDDVYALDG 407


>gi|161618731|ref|YP_001592618.1| peptidoglycan binding domain-containing protein [Brucella canis
           ATCC 23365]
 gi|254701537|ref|ZP_05163365.1| peptidoglycan binding domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|254704086|ref|ZP_05165914.1| peptidoglycan binding domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|254709878|ref|ZP_05171689.1| peptidoglycan binding domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|254713879|ref|ZP_05175690.1| peptidoglycan binding domain-containing protein [Brucella ceti
           M644/93/1]
 gi|254717064|ref|ZP_05178875.1| peptidoglycan binding domain-containing protein [Brucella ceti
           M13/05/1]
 gi|256031370|ref|ZP_05444984.1| peptidoglycan binding domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|256060880|ref|ZP_05451040.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|256369195|ref|YP_003106703.1| peptidoglycan-binding protein, putative [Brucella microti CCM 4915]
 gi|260566666|ref|ZP_05837136.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
 gi|261218874|ref|ZP_05933155.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|261317420|ref|ZP_05956617.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|261321627|ref|ZP_05960824.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261752087|ref|ZP_05995796.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|261754746|ref|ZP_05998455.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
 gi|161335542|gb|ABX61847.1| Peptidoglycan-binding domain 1 protein [Brucella canis ATCC 23365]
 gi|255999355|gb|ACU47754.1| peptidoglycan-binding protein, putative [Brucella microti CCM 4915]
 gi|260156184|gb|EEW91264.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
 gi|260923963|gb|EEX90531.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|261294317|gb|EEX97813.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261296643|gb|EEY00140.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|261741840|gb|EEY29766.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|261744499|gb|EEY32425.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
          Length = 433

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/408 (48%), Positives = 271/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|23501649|ref|NP_697776.1| peptidoglycan-binding protein [Brucella suis 1330]
 gi|23347568|gb|AAN29691.1| peptidoglycan-binding protein, putative [Brucella suis 1330]
          Length = 433

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/408 (48%), Positives = 271/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAACIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|254718880|ref|ZP_05180691.1| peptidoglycan binding domain-containing protein [Brucella sp.
           83/13]
 gi|265983867|ref|ZP_06096602.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|306838784|ref|ZP_07471617.1| peptidoglycan-binding protein [Brucella sp. NF 2653]
 gi|264662459|gb|EEZ32720.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|306406135|gb|EFM62381.1| peptidoglycan-binding protein [Brucella sp. NF 2653]
          Length = 433

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 197/408 (48%), Positives = 271/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPQYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|306841990|ref|ZP_07474664.1| peptidoglycan-binding protein [Brucella sp. BO2]
 gi|306287918|gb|EFM59335.1| peptidoglycan-binding protein [Brucella sp. BO2]
          Length = 433

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 197/408 (48%), Positives = 271/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPQYLTKNKIRLYDQSGQEVLPESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|148558991|ref|YP_001258743.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
 gi|261324878|ref|ZP_05964075.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|265988457|ref|ZP_06101014.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
 gi|148370248|gb|ABQ60227.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
 gi|261300858|gb|EEY04355.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|264660654|gb|EEZ30915.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
          Length = 446

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/408 (48%), Positives = 271/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 30  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 88

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 89  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 148

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 149 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 208

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 209 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 268

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 269 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 328

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 329 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 388

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 389 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|256159492|ref|ZP_05457260.1| peptidoglycan binding domain-containing protein [Brucella ceti
           M490/95/1]
 gi|256254778|ref|ZP_05460314.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|260168504|ref|ZP_05755315.1| peptidoglycan-binding protein, putative [Brucella sp. F5/99]
 gi|261757974|ref|ZP_06001683.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
 gi|261737958|gb|EEY25954.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
          Length = 433

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/408 (48%), Positives = 270/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +   VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPVVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|306843707|ref|ZP_07476307.1| peptidoglycan-binding protein [Brucella sp. BO1]
 gi|306276017|gb|EFM57726.1| peptidoglycan-binding protein [Brucella sp. BO1]
          Length = 433

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 197/408 (48%), Positives = 271/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDAMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPQYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|260563801|ref|ZP_05834287.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
 gi|260153817|gb|EEW88909.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
          Length = 433

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/408 (48%), Positives = 271/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAVSAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|254707013|ref|ZP_05168841.1| peptidoglycan binding domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261314480|ref|ZP_05953677.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|261303506|gb|EEY07003.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
          Length = 433

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 195/408 (47%), Positives = 271/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E +DWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESMDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|225627262|ref|ZP_03785299.1| peptidoglycan-binding protein [Brucella ceti str. Cudo]
 gi|261221958|ref|ZP_05936239.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|265997921|ref|ZP_06110478.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
 gi|225617267|gb|EEH14312.1| peptidoglycan-binding protein [Brucella ceti str. Cudo]
 gi|260920542|gb|EEX87195.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|262552389|gb|EEZ08379.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
          Length = 446

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/408 (48%), Positives = 270/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 30  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 88

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +   VQ LR+RL+ISGDL   
Sbjct: 89  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPVVQYLRKRLMISGDLPQE 148

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 149 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 208

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 209 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 268

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 269 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 328

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 329 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 388

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 389 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|225852279|ref|YP_002732512.1| peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
 gi|256044450|ref|ZP_05447354.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256113294|ref|ZP_05454162.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256264215|ref|ZP_05466747.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
 gi|225640644|gb|ACO00558.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
 gi|263094459|gb|EEZ18281.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
 gi|326408784|gb|ADZ65849.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M28]
 gi|326538502|gb|ADZ86717.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M5-90]
          Length = 433

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/408 (48%), Positives = 271/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAVSAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|62289715|ref|YP_221508.1| peptidoglycan-binding protein [Brucella abortus bv. 1 str. 9-941]
 gi|82699644|ref|YP_414218.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis biovar Abortus 2308]
 gi|189023964|ref|YP_001934732.1| peptidoglycan binding domain protein [Brucella abortus S19]
 gi|254697160|ref|ZP_05158988.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           2 str. 86/8/59]
 gi|254730056|ref|ZP_05188634.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           4 str. 292]
 gi|260545531|ref|ZP_05821272.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
 gi|260757741|ref|ZP_05870089.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260761566|ref|ZP_05873909.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|62195847|gb|AAX74147.1| peptidoglycan-binding protein, hypothetical [Brucella abortus bv. 1
           str. 9-941]
 gi|82615745|emb|CAJ10741.1| Putative peptidoglycan binding domain 1:Twin-arginine translocation
           pathway signal [Brucella melitensis biovar Abortus 2308]
 gi|189019536|gb|ACD72258.1| Putative peptidoglycan binding domain protein [Brucella abortus
           S19]
 gi|260096938|gb|EEW80813.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
 gi|260668059|gb|EEX54999.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260671998|gb|EEX58819.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 433

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 195/408 (47%), Positives = 270/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|265990871|ref|ZP_06103428.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265994707|ref|ZP_06107264.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|262765820|gb|EEZ11609.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263001655|gb|EEZ14230.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 446

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/408 (48%), Positives = 271/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 30  RFLRSAATAGLSVAVSAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 88

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 89  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 148

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 149 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 208

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 209 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 268

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 269 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 328

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 329 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 388

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 389 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|254693508|ref|ZP_05155336.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           3 str. Tulya]
 gi|261213768|ref|ZP_05928049.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915375|gb|EEX82236.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 433

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 195/408 (47%), Positives = 270/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGLNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|237815203|ref|ZP_04594201.1| peptidoglycan-binding protein [Brucella abortus str. 2308 A]
 gi|237790040|gb|EEP64250.1| peptidoglycan-binding protein [Brucella abortus str. 2308 A]
          Length = 446

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 195/408 (47%), Positives = 270/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 30  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 88

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 89  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 148

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 149 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 208

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 209 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 268

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 269 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 328

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R 
Sbjct: 329 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQ 388

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 389 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|163843034|ref|YP_001627438.1| peptidoglycan binding domain-containing protein [Brucella suis ATCC
           23445]
 gi|163673757|gb|ABY37868.1| Peptidoglycan-binding domain 1 protein [Brucella suis ATCC 23445]
          Length = 433

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 194/408 (47%), Positives = 269/408 (65%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                  R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTTQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQD GKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDSGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|294852125|ref|ZP_06792798.1| peptidoglycan binding domain-containing protein [Brucella sp. NVSL
           07-0026]
 gi|294820714|gb|EFG37713.1| peptidoglycan binding domain-containing protein [Brucella sp. NVSL
           07-0026]
          Length = 433

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 195/408 (47%), Positives = 272/408 (66%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL   G++   T  A+NV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADGVMGQFTYAAVNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV +E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPLESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|17987476|ref|NP_540110.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
 gi|17983172|gb|AAL52374.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
          Length = 400

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 195/391 (49%), Positives = 267/391 (68%), Gaps = 3/391 (0%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           +V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI  Y
Sbjct: 1   MVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAIVQY 59

Query: 86  QDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
            DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A+K 
Sbjct: 60  TDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAALKR 119

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNIPAA 203
           FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNIPAA
Sbjct: 120 FQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNIPAA 179

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R+DP
Sbjct: 180 RIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMRKDP 239

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
           +YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++    YM
Sbjct: 240 EYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYAVYM 299

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP++LA
Sbjct: 300 HDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPIQLA 359

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 360 DPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 390


>gi|254689025|ref|ZP_05152279.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           6 str. 870]
 gi|256257275|ref|ZP_05462811.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           9 str. C68]
 gi|260754520|ref|ZP_05866868.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|297248121|ref|ZP_06931839.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
 gi|260674628|gb|EEX61449.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|297175290|gb|EFH34637.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
          Length = 433

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 194/408 (47%), Positives = 269/408 (65%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 17  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 75

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 76  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 135

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL    ++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 136 AGLSTAFDTYVDAALKRFQARHGLPADAVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 195

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 196 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 255

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 256 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 315

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R 
Sbjct: 316 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQ 375

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 376 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|260883548|ref|ZP_05895162.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260873076|gb|EEX80145.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
          Length = 446

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 194/408 (47%), Positives = 269/408 (65%), Gaps = 3/408 (0%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           + L       +     ++V       VL ++I+       +D+FD   A     + ++ P
Sbjct: 30  RFLRSAATAGLSVAASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQP 88

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           ++S +T+A  + AI  Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL   
Sbjct: 89  VLSPQTVADIQNAIVQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQE 148

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            GLS AFD YV++A+K FQ RHGL    ++   T  AMNV V+ R+ QLQ NL R+  L 
Sbjct: 149 AGLSTAFDTYVDAALKRFQARHGLPADAVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLA 208

Query: 188 EQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              M   R+V+VNIPAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  
Sbjct: 209 NDTMQEQRFVMVNIPAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTA 268

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SIIQKD++ L+R+DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKIN
Sbjct: 269 PKSIIQKDIIPLMRKDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKIN 328

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM+STKI F++    YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R 
Sbjct: 329 AMSSTKINFHNPYAVYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQ 388

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +IE  +K+   TP++LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 389 NIEATIKSGVNTPIQLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|118587981|ref|ZP_01545391.1| hypothetical protein SIAM614_10408 [Stappia aggregata IAM 12614]
 gi|118439603|gb|EAV46234.1| hypothetical protein SIAM614_10408 [Stappia aggregata IAM 12614]
          Length = 434

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 159/372 (42%), Positives = 243/372 (65%), Gaps = 5/372 (1%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI--RPLHLG 105
             D FD     +   + S  P +S +T      AI  YQ I+  GGW  +    + L +G
Sbjct: 57  WADNFDIATDHITE-VKSSAPTLSPQTADYIAAAIDRYQRIVQAGGWGTVSTGGKALRIG 115

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V  LR RL++SGDL+   GLS  FD+YV++ ++ FQ+RHGL P G++  ST+ A+
Sbjct: 116 AKDPRVVELRRRLMVSGDLEQQAGLSDTFDSYVDAGLRRFQLRHGLIPDGVMGDSTVTAL 175

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           N+P D+R+RQL+ N++R++  +   +G RYV+VNIPAA +EAVENG V  R T +VG++D
Sbjct: 176 NIPADVRLRQLETNMIRMRS-MSGFLGDRYVMVNIPAAEIEAVENGMVRSRHTAVVGKID 234

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
           RQTPIL+S+I  + FNPYW +P+SII+KD++  +++DPQYL  NNI + D    E+  ++
Sbjct: 235 RQTPILNSKIYELNFNPYWTVPKSIIRKDLIPKMKEDPQYLAKNNIRIFDWSNNELTWQQ 294

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           +DWN+ E   + F QDPG  N++ S +I F++++  Y+HDTP   LF    RF +SGCVR
Sbjct: 295 IDWNTDEATQYRFTQDPGSENSLGSVRINFHNKHQVYLHDTPSKTLFGEANRFHSSGCVR 354

Query: 346 VRNIIDLDVWLLKD-TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           V+N+ +L  WLL+  TP W R  ++ V++T +   VKL +++P++  YI+AW+  D ++ 
Sbjct: 355 VQNVRELVTWLLQSTTPDWDRGRVDGVIRTGEREDVKLKSQIPLYLTYITAWANADGVVH 414

Query: 405 FRDDIYGLDNVH 416
           FRDDIY  D+++
Sbjct: 415 FRDDIYDRDDLY 426


>gi|304391945|ref|ZP_07373887.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303296174|gb|EFL90532.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 421

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 181/388 (46%), Positives = 249/388 (64%), Gaps = 3/388 (0%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDI 88
           + +  + +D I+N       ND FD         + +  PI + +TI   ++AIA Y +I
Sbjct: 28  QALAETAIDRILNAPNRDSWNDSFDATAP-TKAKVVTSTPIFAPQTIDSVQQAIAEYSNI 86

Query: 89  LSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           +  GGWP +P  + L LG S  +V+ LR+RLIISGDL    G+S  FD YV++AVK FQ 
Sbjct: 87  VRNGGWPRVPAGKKLELGVSDDAVRALRQRLIISGDLPRGAGVSPQFDTYVDAAVKRFQA 146

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           RHGL   G++   +  A+NV   +R+ QLQ NL+R+K  +   +G RYV+VNIPAA +EA
Sbjct: 147 RHGLPSDGVMGRYSFAALNVSAPIRLGQLQTNLVRLKA-MSGYLGDRYVMVNIPAAEIEA 205

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           VE G+V  R T IVGR  RQTPIL+S+I  +  NPYW  P+SII KD++ L+R++P YL 
Sbjct: 206 VELGRVAQRHTAIVGRESRQTPILNSKIYELNLNPYWTAPKSIILKDIIPLMRKNPNYLT 265

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
           +N I + D   +EV  + V+WN+ E     FRQ+PG+INAM S KI F + +  YMHDTP
Sbjct: 266 ENKILLFDGNSQEVSPQSVNWNTEEAVKLRFRQEPGRINAMGSVKINFPNPHAVYMHDTP 325

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
           +  +FN ++RFE+SGCVRV+N+ DL VWL KDTP  SR +IE ++ +   T +KL   VP
Sbjct: 326 QKGIFNKLLRFESSGCVRVKNVRDLLVWLAKDTPGASRSNIESIIASGDRTDLKLTAPVP 385

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           V+F Y+SAWS    +  FRDDIY  D V
Sbjct: 386 VYFAYVSAWSNTSGVAHFRDDIYQRDGV 413


>gi|254469893|ref|ZP_05083298.1| twin-arginine translocation pathway signal [Pseudovibrio sp. JE062]
 gi|211961728|gb|EEA96923.1| twin-arginine translocation pathway signal [Pseudovibrio sp. JE062]
          Length = 448

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 168/380 (44%), Positives = 246/380 (64%), Gaps = 5/380 (1%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGN 106
             D FD  ++ ++  ID   PIISK+T      AI  Y+ I   GGWPE+  +  L +G 
Sbjct: 67  WEDTFDEGVSSLE-QIDFVAPIISKQTTQYMIDAILDYERIALNGGWPEVSTKKVLRIGM 125

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            + ++  LR+RLI+SGD+    G+S  FD+YV+SAV+ FQ+RHGL P G+V  +T+ AMN
Sbjct: 126 RAPAIASLRQRLIVSGDMAQHAGVSEVFDSYVDSAVRRFQLRHGLTPDGVVGRATVIAMN 185

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
           VPV++R++QL+ NL R+   L   +   YV VNIPAA +E VENG+V  R T +VG+ DR
Sbjct: 186 VPVEVRLQQLRTNLERVSA-LADNVSDTYVNVNIPAARIEVVENGRVRSRHTAVVGKQDR 244

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           Q+PIL S I  + FNPYW +P SII+KD++  +++DPQYL  NNIH+ D  GKE   +E+
Sbjct: 245 QSPILSSAIYEVNFNPYWTVPVSIIRKDLIPKMQKDPQYLAKNNIHIFDWYGKEKQWQEI 304

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           DWN+ E   + F Q+PG+ N+M S +I F + +  Y+HDTPE  LF    RF +SGCVRV
Sbjct: 305 DWNTDEATKYRFTQEPGEGNSMGSIRINFNNTHQVYLHDTPEQSLFGEGYRFHSSGCVRV 364

Query: 347 RNIIDLDVWLL-KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           +N+ +L  WLL   TP W+R  ++  + + +   VK+ + +P+H  Y++AW+  D ++ F
Sbjct: 365 QNVRELVTWLLGSTTPEWTRSRVDATINSGERLDVKMKSRIPLHLSYVTAWALSDGMVHF 424

Query: 406 RDDIYGLDNVHVGII-PLPE 424
           RDDIY  D ++   + PL +
Sbjct: 425 RDDIYDKDGLYSASVDPLAQ 444


>gi|254502740|ref|ZP_05114891.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222438811|gb|EEE45490.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 408

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 159/388 (40%), Positives = 246/388 (63%), Gaps = 6/388 (1%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            AS               D FD     +   + S  P +S  T+     AI  YQ I+  
Sbjct: 14  AASAQQSFRTAGQDLEWADSFDIATDNITE-VKSYAPTLSPTTVDYIGAAITRYQSIVQM 72

Query: 92  GGWPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           GGW  +    + L +G     V ++R+RLIISGDL+   GLS  FD+YV++A++ FQ+RH
Sbjct: 73  GGWGTVSTGGKALRIGMKDPRVVQVRQRLIISGDLEQQAGLSDTFDSYVDAALRRFQLRH 132

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL P G++  ST+EA+N+P  +R+RQL+ NL+R++  +   +G RYV+VNIPAA +EAVE
Sbjct: 133 GLIPDGVMGESTVEALNIPAYVRLRQLETNLVRVRS-MSGNLGDRYVMVNIPAAEIEAVE 191

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +G+V  R T +VG++DRQTPIL+S+I  + FNPYW +P SII+KD++  +++DP+YL  N
Sbjct: 192 DGRVRSRHTAVVGKIDRQTPILNSKIYELNFNPYWTVPVSIIRKDLIPKMKEDPEYLSRN 251

Query: 270 NIHMID-EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
            I + +    +EV  +++DWN+ E   + F QDPG+ N++ S +I F++++  Y+HDTP 
Sbjct: 252 KIRIFNWRDNQEVAWQQIDWNTDEATQYRFTQDPGQENSLGSVRINFHNKHQVYLHDTPS 311

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKD-TPTWSRYHIEEVVKTRKTTPVKLATEVP 387
             LF    RF +SGCVRV+N+ +L  WLL+  TP W R  ++ V++T +   VKL   +P
Sbjct: 312 KTLFGEDYRFHSSGCVRVQNVRELVTWLLQSTTPDWDRTKVDSVIRTGEREDVKLKRSIP 371

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           ++  Y++AW+  D ++ FR+DIY  D++
Sbjct: 372 LYMTYVTAWANADGVVHFREDIYNRDDL 399


>gi|218662321|ref|ZP_03518251.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli IE4771]
          Length = 495

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 189/367 (51%), Positives = 258/367 (70%), Gaps = 5/367 (1%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            S LD ++N       +D+FD   A R    + S+ PI+  +++A  ++AI  YQ I + 
Sbjct: 35  QSALDGLLNAPRRGNWDDQFDAKAASRTATAVVSNTPILGPQSVASAQQAIMQYQQIAAA 94

Query: 92  GGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           GGWPE+      L LG S  +VQ LR+RL I+GDL    GLS AFD+YV+ AVK FQ RH
Sbjct: 95  GGWPEVNPGDQRLQLGVSHPAVQALRQRLAITGDLPREAGLSSAFDSYVDGAVKRFQARH 154

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G++   TL+AMN+P D+R++QL  N++R++    + +G R+++VNIPAA +EAVE
Sbjct: 155 GLPADGVLGEFTLKAMNIPADVRLQQLNTNIVRLQTF-PEDLGRRHLMVNIPAAYVEAVE 213

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ N
Sbjct: 214 DGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKN 273

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            I +ID KG EV  E VDWN  E PN +FRQDPGKINAMASTKI FY++N  YMHDTP+ 
Sbjct: 274 AIRLIDGKGNEVAPETVDWNG-EAPNLMFRQDPGKINAMASTKINFYNKNGEYMHDTPQQ 332

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  +E+V+ +   TP+KLA EVPV+
Sbjct: 333 GLFNKLMRFESSGCVRVQNVRDLTNWLLRETPGWSRQQMEQVIASGVNTPIKLAAEVPVY 392

Query: 390 FVYISAW 396
           FVYISAW
Sbjct: 393 FVYISAW 399


>gi|209965708|ref|YP_002298623.1| peptidoglycan binding domain protein, putative [Rhodospirillum
           centenum SW]
 gi|209959174|gb|ACI99810.1| peptidoglycan binding domain protein, putative [Rhodospirillum
           centenum SW]
          Length = 596

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 120/418 (28%), Positives = 193/418 (46%), Gaps = 12/418 (2%)

Query: 18  LILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
             L  G  L    +  S +D E+I E                 D G        ++    
Sbjct: 150 GALLFGRDLAAGRLDPSRIDPELIVERQEPDPQALLRQVAEAADPGGAVRAMAPARPEYR 209

Query: 77  QTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA- 133
           +   A+A Y+ + + GGW  +P     L  G S   V  LR RL  +G+L P+       
Sbjct: 210 RLRAALAAYRTLAAAGGWLAVPTGGETLKPGQSDPRVPALRARLAATGELSPAAPAPADP 269

Query: 134 --FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +D  +E+AV+LFQ R+GL+P G V   ++ A+NV    R+ Q+++N+ R +  L   +
Sbjct: 270 QFYDPALEAAVRLFQSRNGLEPDGAVGRQSVAALNVTAQQRVTQIEINMERWR-WLPADL 328

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G  Y++VN+ A  L   E  +    + ++VG    +TP+    +  +  NPYW +P SI 
Sbjct: 329 GPSYLIVNLAAFELAVFEGDRPVHTARIVVGAPFTRTPVFSESMTYLELNPYWNVPPSIA 388

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           + ++    R+DP YL      ++ +  +    V    VDW       +  RQ PG  N++
Sbjct: 389 RDEIFPKARKDPGYLARRGYELLSDWSETAVPVDPATVDWRHGNLNRYKVRQKPGDTNSL 448

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK--DTPTWSRY 366
              K  F +R N Y+HDTP   LF    R  + GC+RV N +DL   +L+   T  W R 
Sbjct: 449 GRIKFMFPNRFNVYLHDTPSKRLFERANRTFSHGCMRVENPLDLAETVLRLTGTTGWDRA 508

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
            ++  +   +   V+L   +PVH  Y++A+  +D  + FR DIYG D      +  P+
Sbjct: 509 RLDAAIAGDQRQVVRLRRPLPVHVTYVTAFVEEDGTVAFRPDIYGRDTTLAAALAAPQ 566


>gi|218515859|ref|ZP_03512699.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli 8C-3]
          Length = 372

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 193/357 (54%), Positives = 257/357 (71%), Gaps = 4/357 (1%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRER 117
              + S+ PI+  +++A  ++AI  YQ I + GGWPE+      L LG S  +VQ LR+R
Sbjct: 1   ASAVVSNTPILGPQSVASAQQAIMQYQQIAAAGGWPEVNPGDQRLQLGVSHPAVQALRQR 60

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L I+GDL    G+S AFD+YV+ AVK FQ RHGL   G++   TL+AMN+P D+R++QL 
Sbjct: 61  LAITGDLPREAGMSSAFDSYVDGAVKRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQLN 120

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
            NL+R++    + +G R+V+VNIPAA +EAVE+G V  R T +VGR+ R T +++S+I  
Sbjct: 121 TNLVRLQTF-PEDLGRRHVMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIYE 179

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
           ++ NPYW  PRSI++KD+M L+R+DP YL+ N I +ID KG EV  E VDWN  E PN  
Sbjct: 180 VILNPYWTAPRSIVEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVAPETVDWNG-EAPNLQ 238

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           FRQDPGKINAMASTKI FY++N  YMHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLL
Sbjct: 239 FRQDPGKINAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLTNWLL 298

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           ++TP WSR  +E+V+ T   TP+KLATEVPV+FVYISAW   D I+QFRDDIY +D 
Sbjct: 299 RETPGWSRQQMEQVIATGVNTPIKLATEVPVYFVYISAWGMPDGIVQFRDDIYQMDG 355


>gi|114319260|ref|YP_740943.1| peptidoglycan binding domain-containing protein [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114225654|gb|ABI55453.1| Peptidoglycan-binding domain 1 protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 559

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 128/396 (32%), Positives = 206/396 (52%), Gaps = 9/396 (2%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI 99
           +       +       LA  D+          ++   Q  +A+A +Q +  +G +P +  
Sbjct: 153 LQSPPSEDLVQALSQGLAEDDIATAVRQLYPDQDNYHQMRRALARFQALAEQGDYPRMEA 212

Query: 100 RPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA-FDAYVESAVKLFQMRHGLDPSGMV 157
            PL  +G+    V+ LRE+L + GDL+    LS   +   +E+AV+ FQ RHGL   G+V
Sbjct: 213 GPLLRVGDRDPRVETLREQLRLLGDLEDDAPLSETLYGEALEAAVRDFQRRHGLQVDGVV 272

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
              T+ A+N P   R  QL+VNL R++  + + +G RY+LVNI   S+     G+  +R 
Sbjct: 273 GPRTVAALNTPPADRAEQLRVNLERLR-WMPRDLGDRYILVNIAGFSMTVHAEGETVMRQ 331

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V+VGR  R+TP+    +  ++ NP W +P  +  +D++ L+++DP+YL+     ++   
Sbjct: 332 RVVVGRDYRRTPVFTGNMTYLVLNPSWEVPHRLATRDVLPLIQRDPEYLERMGFRVLQGW 391

Query: 278 G---KEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           G   +E+  E +DW+      F +R  Q PG  NAM   K  F +R+N Y+HDTP   LF
Sbjct: 392 GADEREIDPESLDWDRYSHRYFPYRLRQLPGPQNAMGRVKFMFPNRHNVYLHDTPSRELF 451

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
               R  +SGC+RV   ++L  WLL+D   WS   I++ ++ R+   V L   +PVH  Y
Sbjct: 452 QQPRRAFSSGCIRVERPLELAAWLLRDQRQWSPEAIDKALEERRERTVPLRRGIPVHLQY 511

Query: 393 ISAWSPKDSIIQFRDDIYGLD-NVHVGIIPLPEDHP 427
            +AW   +  + FRDD+Y  D  V   +  LP+  P
Sbjct: 512 WTAWVDAEGTLHFRDDLYDRDTGVAAALAALPKPEP 547


>gi|182677877|ref|YP_001832023.1| peptidoglycan binding domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182633760|gb|ACB94534.1| Peptidoglycan-binding domain 1 protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 456

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 167/401 (41%), Positives = 258/401 (64%), Gaps = 10/401 (2%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESY--HSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           ++L MGL L + P+  S     +   Y   +    R+D         + S++P++S +T+
Sbjct: 33  ILLAMGLCLSQLPLQVS---SALAGPYGSQAEWAQRYDTDANLA--VLRSNVPVLSVQTL 87

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
             TE+AI  Y++I++RGGW  +     L LG ++ +V  LR+RLI +GDLD S G S  F
Sbjct: 88  NATEQAIETYRNIVARGGWNRVSASATLKLGANNAAVTELRKRLIETGDLDASAGTSPIF 147

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D+YV++ V+ FQ RHGL  +G+V+  T+ AMNVP D+R+ QL+VNL+R++      +G R
Sbjct: 148 DSYVDAGVRHFQARHGLAETGIVNRETVTAMNVPADVRLHQLEVNLVRLRSY-SGNLGER 206

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +V+ NIPA ++E VENG V       VG++DRQ+P++ +R   I FNPYW +P SII+KD
Sbjct: 207 FVMANIPAMAVETVENGVVATHHIAGVGKIDRQSPVMMTRATDINFNPYWTVPASIIRKD 266

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKI 313
           ++  +++DP YL D+ I + ++ G+E+   +V+WNS E  N+ FRQDPG  IN++   +I
Sbjct: 267 LIPRMQKDPNYLSDHKIRIFNKDGQELQSSQVNWNSLEATNYRFRQDPGGDINSLGVVRI 326

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              +    YMHDTPE  +F +  RF +SGC+RV+N+ D   WLLKDTP W R HI+E ++
Sbjct: 327 NIANPYGVYMHDTPEKGVFGDDERFVSSGCIRVQNVRDYVTWLLKDTPGWDRAHIDEAIR 386

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + +    K+ + VPV++VY++AW+  D ++QFR+DIY  D 
Sbjct: 387 SGQRIDAKITSSVPVYWVYVTAWATPDGLVQFREDIYQRDG 427


>gi|307946606|ref|ZP_07661941.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307770270|gb|EFO29496.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 437

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 163/394 (41%), Positives = 250/394 (63%), Gaps = 5/394 (1%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
                 S L  +   +      D F + +  +   ++S  P +S ET      AI  Y  
Sbjct: 35  SSASAESPLQALQQYNQRVEWQDDFQSTVQSLK-ALESSAPTLSPETADYMGVAIDRYSR 93

Query: 88  ILS--RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           I+     G      R L +G+    V  LR+RL+ SGDL  + G+S  FD+YV++AV+ F
Sbjct: 94  IVQLGGWGGVTSGGRALRIGSKDNRVVELRQRLMASGDLQQNAGMSSVFDSYVDAAVRRF 153

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q+RHGL P G+V  ST+ A+NVP ++R+RQL+ NL+R++  +   +G RYV+VNIPAA +
Sbjct: 154 QLRHGLLPDGVVGESTIVALNVPANVRLRQLETNLVRLRS-MSGFLGDRYVMVNIPAAEI 212

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
           EAVE G+V  R T +VG++DRQTPIL+S+I  + FNPYW +P SII+KD++  ++QDPQY
Sbjct: 213 EAVEYGRVRSRHTAVVGKIDRQTPILNSKIYELNFNPYWTVPVSIIRKDLIPKMKQDPQY 272

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
           L  N I + D KG E+  +++DWN+ E   + FRQ+PG+IN++ S +I F++++  Y+HD
Sbjct: 273 LAKNRIRIFDWKGNELAWQQIDWNTDEATKYQFRQEPGEINSLGSVRINFHNKHQVYLHD 332

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD-TPTWSRYHIEEVVKTRKTTPVKLAT 384
           TP   LF +  RF +SGCVRV+N+ ++  WLL+  TP W R  +++V++T     V+L +
Sbjct: 333 TPSKTLFGSDYRFHSSGCVRVQNVREMVTWLLQSTTPDWDRARVDQVIRTGAREDVRLKS 392

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +P++  YI+AW+  D +I FRDD+Y  D ++ G
Sbjct: 393 SIPLYLTYITAWANADGVIHFRDDVYNRDGLYNG 426


>gi|217978266|ref|YP_002362413.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217503642|gb|ACK51051.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 447

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 166/416 (39%), Positives = 253/416 (60%), Gaps = 8/416 (1%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
            +   L    + AS+       S  +    R+D    R+ +   S+ P++S++T+A TE+
Sbjct: 14  AIAAILTGLCLGASLPALAAGYSDQAEWAQRYDA-APRLAV-TRSNTPVLSQQTLAATEQ 71

Query: 81  AIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           AI  Y+ I++ GGW  +P    L LG S  SV  LR+RL+ SGDLD S G S  FD++VE
Sbjct: 72  AIETYRQIVASGGWNMVPASNVLKLGVSGPSVVALRKRLVASGDLDASAGASPVFDSFVE 131

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           + VK FQ RHGL  +G+V   T  A+N   DLR+ QL++NL+R++      +G R+V+ N
Sbjct: 132 AGVKHFQARHGLLETGLVSKDTFAALNATADLRLHQLEINLIRLRSY-SGNLGERFVMAN 190

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IPA ++E VENG V       VG++DRQ+P++ ++   I FNP+W +P S+I+KD++  +
Sbjct: 191 IPAMAVETVENGAVATHHAAGVGKIDRQSPVMMTKATDINFNPFWTMPPSLIKKDLIPRM 250

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSR 318
           +++P YL ++ I + D+  +EV   ++DW + +  N+ +RQDPG  IN++   +I   + 
Sbjct: 251 QKNPDYLTEHKIRIFDKDNQEVPPSQIDWTTNQATNYRYRQDPGGDINSLGVVRINISNP 310

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
              YMHDTPE  +F +  RF +SGC+RV+N+ D   WLLKDTP W R HI+E +++ +  
Sbjct: 311 YGVYMHDTPEKGVFGDDFRFVSSGCIRVQNVRDYVAWLLKDTPGWDREHIDEAIRSGQRI 370

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN---VHVGIIPLPEDHPIDSD 431
             KLAT VPV++VYI+AWS  + +IQFRDDIY  D         +  P +  I  D
Sbjct: 371 DAKLATPVPVYWVYITAWSTPEGLIQFRDDIYQRDGFGPTASSGVGAPLEQAIQPD 426


>gi|194334694|ref|YP_002016554.1| peptidoglycan-binding domain 1 protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194312512|gb|ACF46907.1| Peptidoglycan-binding domain 1 protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 565

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 122/408 (29%), Positives = 203/408 (49%), Gaps = 24/408 (5%)

Query: 38  EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA-------QTEKAIAFYQDILS 90
           E ++ +++       D  L R+   I+ D    + E I          +KA+A Y+D  S
Sbjct: 157 EKLDSNWNISNGFNGDGLLWRLQNAIEGDSIAAALEQIRPVHPKYLSLKKALARYRDYES 216

Query: 91  RGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSV-------AFDAYVESA 141
            GGWP +P  P   H G+    +  LR RL I+G+      +          +   +  A
Sbjct: 217 DGGWPSIPAGPSIRHEGDRDERIPVLRRRLEITGEAVSLATVDTSFADSAMVYSKELVDA 276

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           V +FQ R+GL+  G+V   TLEA+N+    R+ Q+++NL R +  + + +   +++VNI 
Sbjct: 277 VMVFQRRNGLEVDGVVGPRTLEALNISASQRVEQIRINLERYRWFITK-LEPTFIMVNIA 335

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
             +++ VENG +   S VIVG    +TP+  + +  ++FNP W +P  I++K+ +  ++ 
Sbjct: 336 GFTIQYVENGALTWSSRVIVGEPFWKTPVFRADMRYLIFNPSWNVPPGILKKEALPSMKS 395

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRN 319
           D  YL  N + +ID  G  V    +DW      +F +  RQ PG  NA+   K  F +R+
Sbjct: 396 DGGYLSRNGLQVIDRNGNVVDPSSIDWAGYSAGSFPYRLRQPPGVRNALGRVKFMFPNRH 455

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             Y+HDTP   LF+   R  + GC+R+ N +DL   LL     WS   IE  + + KT  
Sbjct: 456 FVYLHDTPGKHLFDRSERAFSHGCIRLENPLDLAGVLL----GWSPEQIESALSSGKTRT 511

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
           V L+  +PV  +Y++A +  D  + FR+D+Y  D   +  +     + 
Sbjct: 512 VNLSRPIPVFLLYLTAVAEGD-EVLFRNDVYNRDAAVLNALDRSFPYK 558


>gi|323136642|ref|ZP_08071723.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322397959|gb|EFY00480.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 435

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 161/401 (40%), Positives = 256/401 (63%), Gaps = 9/401 (2%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE 79
           L +GLSL       +  D        +    R+D   AR+ +   S  PI+S +T+A TE
Sbjct: 9   LSLGLSLAAGAPAFAGSD----YDGQAEWAQRYDA-DARLTVS-RSTTPILSTQTVAATE 62

Query: 80  KAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            AI  +++I++ GGWP++P    L LG SS +V  LR+RLI+SGD+    G S  FD+YV
Sbjct: 63  AAIEQFREIVANGGWPQVPAGHQLRLGVSSPAVSTLRKRLIVSGDIGHETGTSPIFDSYV 122

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
           E+AV+ FQ RHG+  +G+V+  T  A+NVP + R+RQL+ NL+R++    + +G RYV  
Sbjct: 123 EAAVRRFQARHGIIETGVVNQQTFAALNVPAETRLRQLETNLVRLRSF-SRDLGNRYVTA 181

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           NIPAA++E VENG+V       VG++DRQ+P++ ++  ++ FNP+W +P S+I+KD++  
Sbjct: 182 NIPAATVETVENGQVVTHHIAGVGKIDRQSPVMQTKAIQVNFNPFWTVPASVIRKDLIPK 241

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD-PGKINAMASTKIEFYS 317
           ++ DP YL DN+I + +++G+E+  E+++W S +  N+ FRQD  G  N++   +I+  +
Sbjct: 242 MQADPNYLHDNHIRVYNKEGQELQPEQINWRSLDALNYKFRQDIGGDFNSLGVVRIDIAN 301

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
               YMHDTP   +F +  RF +SGC+R++N+ D   +LL++TP W R HI++V+ + + 
Sbjct: 302 PYGVYMHDTPAKGVFGDDFRFVSSGCIRLQNVRDYVAFLLRETPGWDRDHIDQVIASGER 361

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
             VK+   VPV++VY++AW   D + QFRDDIY  D + V 
Sbjct: 362 VDVKITPPVPVYWVYVTAWGAPDGVTQFRDDIYQRDGLGVS 402


>gi|118588095|ref|ZP_01545505.1| hypothetical protein SIAM614_10978 [Stappia aggregata IAM 12614]
 gi|118439717|gb|EAV46348.1| hypothetical protein SIAM614_10978 [Stappia aggregata IAM 12614]
          Length = 535

 Score =  451 bits (1161), Expect = e-124,   Method: Composition-based stats.
 Identities = 124/412 (30%), Positives = 196/412 (47%), Gaps = 7/412 (1%)

Query: 14  FFVYLILPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
                 L     L    +  + +++ +N           F+N    VD G   +      
Sbjct: 120 DLSVQFLRYATHLSSGRVQPNKVNKALNLFPDRPDPQTLFENAEQAVDFGAFLESLAPQT 179

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +  A+ ++ +A Y++  + GG+ ++P    L  G S   +  LR RL        +    
Sbjct: 180 DNYARLKRRLAQYREKAAAGGFAQVPEGEVLKPGMSDPRLTVLRTRLAEEDIPGAADHTG 239

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +D  +  AVKLFQ  HGL+  G++   T+  +N+P+  ++ Q+++N+ R ++ +    
Sbjct: 240 DIYDGALVEAVKLFQEYHGLETDGVIGKDTIAQLNIPIQEKLIQMELNMER-RRWMPDDP 298

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G  YV VN+   +L+ V +GK    + V+VG+    TP+   R+  +  NPYW +P SI 
Sbjct: 299 GQFYVFVNLADQNLKVVRDGKTIHTARVVVGKPYHATPVFSDRLEYVEINPYWNVPYSIA 358

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMA 309
            K+ +  L+Q+P  L   +I +  E G EV   +V WNS    NF F  RQDPG  NA+ 
Sbjct: 359 TKEYLPKLKQNPTALNGKSIRVFQE-GNEVAPTQVAWNSYSGGNFPFRLRQDPGADNALG 417

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +R N Y+HDTP   LF    R  + GC+RV +   L   LL D+   +  H E
Sbjct: 418 RIKFMFPNRFNIYIHDTPSKSLFARAERAFSHGCIRVSDPFALADVLLVDSDA-TPGHWE 476

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            +    + T VK   E+ VH  Y++AW  KD    FR DIY  D V +  + 
Sbjct: 477 AIRDGGERTVVKPKVEIDVHLTYLTAWMNKDGSTHFRKDIYNRDKVLLEALR 528


>gi|297568521|ref|YP_003689865.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924436|gb|ADH85246.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 557

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 130/361 (36%), Positives = 194/361 (53%), Gaps = 11/361 (3%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
             +    +A Y+ +  +GGWP++P    L LG+    V  LR+RL  S DL  +      
Sbjct: 193 YRELRATLADYRRLAEQGGWPQVPGSTTLRLGDRDHRVVTLRQRLHRSRDLSGTAARGDV 252

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FD  +E+AV+ FQ RHGL   G+V   TL A+NVP+++RIRQL++NL R +  L ++ G 
Sbjct: 253 FDETLEAAVRSFQQRHGLLADGVVGRQTLAALNVPLEVRIRQLKLNLERWR-WLAEEFGR 311

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R++LVN  A  LE +E+ +  L   V+ G   R+TP    R+  ++ NPYW IP SI  +
Sbjct: 312 RHILVNTAANKLELIEDEQAILSMRVVTGTPYRRTPNFSDRVTYLVLNPYWNIPASIAAQ 371

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWN----SPEPPNFIFRQDPGKIN 306
           D++  L+++P YL  N I ++D    +   V  + VDW      P+   +  RQDPG  N
Sbjct: 372 DILPELQENPDYLAQNGIKVLDGWNADSATVTPDTVDWERLRTRPQAFPYRLRQDPGPRN 431

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            +   K  F +  + Y+HDTP   LF+   R  +SGC+R+   ++L   LL  TP  S  
Sbjct: 432 PLGRIKFMFPNAYSVYLHDTPARELFHRQTRNFSSGCIRLERPLELAANLLAGTPLDSVG 491

Query: 367 HIEEVV--KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
            +   +  +T     V+L + VPVH VY +AW   D  +QFRDDIY  D +    +  P 
Sbjct: 492 ALRRALFDETSHDRHVRLPSPVPVHLVYWTAWVAPDGSVQFRDDIYERDGLLAQALTTPP 551

Query: 425 D 425
            
Sbjct: 552 P 552


>gi|296444378|ref|ZP_06886343.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296258025|gb|EFH05087.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 443

 Score =  448 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 167/416 (40%), Positives = 255/416 (61%), Gaps = 10/416 (2%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
            F       +  SLV        L         +    R+D    R+ +   S  PI+S 
Sbjct: 8   AFAPLRASILAASLVSPA----ALAAGDGYGGQAEWAQRYDA-DPRLTVS-RSTTPILST 61

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +T+A TE AI   QDI++RGGWP +P    L LG++S +V  LR RL+ISGD+    G S
Sbjct: 62  QTVAATEAAIQQMQDIVARGGWPMVPAGQQLKLGSNSPAVSILRRRLMISGDIGQDAGAS 121

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FD+YVE+AV+ FQ RHG++ +G+V   T  AMNVP + R+RQL+ NL+R++    + +
Sbjct: 122 PIFDSYVEAAVRRFQARHGVNATGVVAQQTFVAMNVPAEARMRQLETNLIRLRSF-SRDL 180

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G RYV  NIPAAS+E VENG V       VG++DRQ+P++ ++  +I FNP+W +P S+I
Sbjct: 181 GNRYVTANIPAASVETVENGYVVTHHIAGVGKIDRQSPVMQTKAIQINFNPFWTVPASVI 240

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD-PGKINAMAS 310
           +KD++  ++ DP YL  N+I + ++ G E+  E+++WNS +  N+ FRQD  G  N++  
Sbjct: 241 RKDLIPKMQADPNYLTANHIRVYNKDGMELAPEQINWNSLDAMNYKFRQDIGGDFNSLGV 300

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            +I+  +    YMHDTP   +F +  RF +SGC+R++N+ D   WLLK+TP W R HI+E
Sbjct: 301 VRIDIANPYGVYMHDTPAKGIFGDDFRFVSSGCIRLQNVRDYVAWLLKETPGWDRDHIDE 360

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG-IIPLPED 425
           V+++ +   V++   VPV++VY++AW+  D +IQFRDDIY  D + +   +  P+ 
Sbjct: 361 VIRSGERVDVRITPAVPVYWVYVTAWAAPDGLIQFRDDIYQRDGLGLASAVSAPQP 416


>gi|237730888|ref|ZP_04561369.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906427|gb|EEH92345.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 622

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 127/431 (29%), Positives = 199/431 (46%), Gaps = 45/431 (10%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K N+ LY    Y       +L   PI       +IN+   ++ N + 
Sbjct: 201 MMGYLHFIANIPVKGNRWLYSDKPY-------ALTTPPI------SVINQWQVALDNGQL 247

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSV 111
            +F+A +                A   +++     +     WP+L     L  G  S  +
Sbjct: 248 TSFVASLAPQ---------HPQYAAMHESLLKL--VGDTRPWPQLTSTATLRPGEWSNDI 296

Query: 112 QRLRERLIISGDLDPSKGLSV-----AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             LRE L  +G L+P+   S       +D  +  AVK FQ   GL   G +  +T + +N
Sbjct: 297 PALREILRRTGMLEPAVSTSGKEGRGTYDRELVDAVKRFQTWQGLGADGAIGPATRDWLN 356

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
           V    R   L +N+ R++ L  +      ++VNIPA SL   +NG   L S VIVGR DR
Sbjct: 357 VTPAQRAGVLALNIQRLRLLPSEL--STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDR 414

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVE 284
           +TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   ++     +  +   
Sbjct: 415 KTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKETIDPW 474

Query: 285 EVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
           +VDW +    N  FR  Q PG  N++   K    S +  Y+HDTP   LF    R  +SG
Sbjct: 475 QVDWATITASNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDTRALSSG 534

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           CVRV    +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D  
Sbjct: 535 CVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVGPDGR 593

Query: 403 IQFRDDIYGLD 413
            Q+R DIY  D
Sbjct: 594 TQYRTDIYNYD 604


>gi|189501015|ref|YP_001960485.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeobacteroides
           BS1]
 gi|189496456|gb|ACE05004.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeobacteroides
           BS1]
          Length = 566

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 115/400 (28%), Positives = 202/400 (50%), Gaps = 25/400 (6%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
           D +     +++  D     +A++              + +  ++ +A Y+ + + GGW  
Sbjct: 176 DGLAGMLRNALAGDSLAALIAQLRPK---------HPSYSSLKEGLARYRRLAADGGWGT 226

Query: 97  LPIRPL--HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY-------VESAVKLFQM 147
           +P  P    +G     +  LR RL ISG+++    +  ++          ++ AVK FQ 
Sbjct: 227 VPEGPTIKEIGQYDARIPALRGRLEISGEIEQLSKVDTSYADEAMRYSVGLQEAVKKFQN 286

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           RHGL   G V   TL A+NVPV+ R+ Q+++NL R +  + QK+   Y+LVNI   ++  
Sbjct: 287 RHGLQEDGEVGPKTLRALNVPVEKRVEQIRINLERYRWFV-QKLEPTYLLVNIAGFNITY 345

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
            E G     S VIVG    +TP+  +++  ++FNP W +P  I++K+ +  +R+DP YL 
Sbjct: 346 FEQGAFKWGSRVIVGEPFWKTPVFKAQMQYVIFNPSWNVPPGILRKEALPAIRKDPGYLS 405

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
            + + ++D  G  V    V+W S    ++  RQ PG  NA+   K  F +++  Y+HDTP
Sbjct: 406 RHGLQVVDRNGNVVNPGSVNWAS-GAQSYRLRQPPGSRNALGRVKFMFPNKHLVYLHDTP 464

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
              LF+   R  + GC+R++N +DL   LL     WS   + + V   +T  + L T++P
Sbjct: 465 GKHLFDKSSRAFSHGCIRLQNPLDLAELLL----GWSGEKVRQTVSAGRTRRINLPTKLP 520

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
           V  +Y++A   +   +QF++D+Y  D   +  +  P  + 
Sbjct: 521 VFLLYLTA-VAEGEEVQFKNDVYSRDAAVLQALNSPFPYK 559


>gi|163793880|ref|ZP_02187854.1| Peptidoglycan-binding domain 1 protein [alpha proteobacterium
           BAL199]
 gi|159180991|gb|EDP65508.1| Peptidoglycan-binding domain 1 protein [alpha proteobacterium
           BAL199]
          Length = 515

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 124/414 (29%), Positives = 198/414 (47%), Gaps = 13/414 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD---MGIDSDIPIISKET 74
            +L     L    +     D  + +  H +   +  + +A  D     I+   P  S   
Sbjct: 102 SLLRFLTDLRSGRLAPHEADPDLFQERHLVDGKQLLSQVADADDPVRAIEQAGP--SNPI 159

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
             +  + +A Y+ +   GGWP +P+   L  G     V  +R RL++S  L  +      
Sbjct: 160 YHRLRRLLANYRGLAVHGGWPSVPVGDALKPGMRDPRVAAIRTRLMLSESLTLTSDDPEF 219

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D     A++ FQ RHGL+  G+V + TL A+NVP++ RI Q+ VN+ R +  +  + G 
Sbjct: 220 YDDGFGLAMRGFQRRHGLEDDGVVGTRTLAALNVPIEHRIEQIVVNMERFR-WMPDEFGD 278

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            +V VN+    L+ V  G V +   V+VGR  R+TP+   RI  +  NP W +P  I  +
Sbjct: 279 DHVFVNLADFMLDYVRRGLVAMSMRVVVGRQYRETPVFSDRIRYLELNPTWTVPAKIASE 338

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPGKINAM 308
           D+++ +R +P YL      +          +    VDW+S     F +  RQ PG+ NA+
Sbjct: 339 DLLSKIRANPSYLSSAGFEVFAGSRDNATLIDPASVDWSSLAKGRFPYTLRQQPGRQNAL 398

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F +R + Y+HDTP   LF   VR  +SGC+R+   +DL   LL          I
Sbjct: 399 GRVKFMFPNRFDIYLHDTPARELFRRSVRTFSSGCIRLEKPLDLASRLLV-ADGQDPDRI 457

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
             V+++ KTT + L   V VH  Y++AW  +   ++FRDD+YG D +    + L
Sbjct: 458 GSVLESAKTTRINLREPVAVHLTYLTAWVGEGGTVEFRDDVYGRDALLAKALGL 511


>gi|170751743|ref|YP_001758003.1| peptidoglycan binding domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658265|gb|ACB27320.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 432

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 233/353 (66%), Gaps = 4/353 (1%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD 125
           +PI+S +T+A TE+ +  Y+DI++RGGW ++     L +G+   +V  +R+RLI++GDLD
Sbjct: 56  VPILSPQTVASTEQMVERYKDIVARGGWRQVSGADHLRIGSRGPAVAAIRQRLIVTGDLD 115

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+ G S  +D+YV + VK FQ RHGL  +G +  +T +AMNVP D+R+RQL++N++R++ 
Sbjct: 116 PAAGSSGVYDSYVAAGVKRFQARHGLSQTGAMTMATQQAMNVPADVRLRQLEINVVRLRS 175

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                +G R+V+ NIPAA +E VENG+V       VG++DRQ+PI++++  +I FNP W 
Sbjct: 176 Y-SGDLGRRFVITNIPAALVETVENGQVVTLHAAGVGKIDRQSPIMNTKATQINFNPTWT 234

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P SI++KD++  +++DP YL DN I ++   G EV  + V+W S E   + +RQD G  
Sbjct: 235 VPASIVKKDLIPKMQKDPNYLTDNKIRIL-SNGSEVSPKSVNWFSDEGTRYTYRQDSGAD 293

Query: 306 -NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N+M   +I   +    +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP W 
Sbjct: 294 FNSMGIVRINIPNPYGVFMHDTNTKGVFGDDFRFISSGCVRVQNVREYITWLLKDTPGWD 353

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           R  +EE +++ K     +A  VPV++ YI+AWS  D I+QFRDDIY  D V+V
Sbjct: 354 RQKVEEAIESGKRIDANIAQPVPVYWTYITAWSTPDGIVQFRDDIYKRDGVNV 406


>gi|145219195|ref|YP_001129904.1| peptidoglycan binding domain-containing protein [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205359|gb|ABP36402.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeovibrioides
           DSM 265]
          Length = 550

 Score =  443 bits (1140), Expect = e-122,   Method: Composition-based stats.
 Identities = 125/418 (29%), Positives = 207/418 (49%), Gaps = 14/418 (3%)

Query: 18  LILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET-- 74
           ++L   +  +   +    +D E ++ +++     R      ++   + S   + + +   
Sbjct: 124 ILLTDAMLSLATHLRYGKVDPERLDPNWNLTDPKRLAELQLQLQKALASGSILTALQKMR 183

Query: 75  -----IAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD-PS 127
                     +A+A Y+ I   GGWP +P    +  G S   V  +R RL ++GD +   
Sbjct: 184 PEYFKYGLEREALARYRQIEQAGGWPVVPGGQAIRPGQSDPRVPLIRRRLSVTGDFEGRG 243

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
           K  SV  D+ + +A++ FQ RH L   G+   +TL AMNV    R++QL+VNL R +  +
Sbjct: 244 KESSVVLDSELAAAIRNFQKRHALQADGVAGGATLAAMNVTARERVQQLRVNLERYRWFV 303

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            Q +   +VLVNI   SL+ V  G +   + VIVG+  R+TP+  + +  ++FNP WV+P
Sbjct: 304 GQ-LEPTFVLVNIAGFSLQYVHEGSLRWSTRVIVGQPYRKTPVFKADMYSVLFNPRWVVP 362

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKI 305
            +I+ +D +  +RQDP YL    + +ID KG  V    ++WN+     F +R  Q  G  
Sbjct: 363 PTILAEDALPAIRQDPGYLSRKQLQVIDGKGSPVDPSSINWNAFGAAAFPYRLQQKAGDH 422

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            A+   K    +R+  Y+HDTP   LF    R  +SGC+RV N   L   +L D+  W+ 
Sbjct: 423 GALGRIKFVMPNRHIVYLHDTPTKDLFEKSSRTFSSGCIRVENPARLAELVLDDSLKWNG 482

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
             I   + T KT    L   +PV  +Y++A + +D  + F +DIY  D   +  +  P
Sbjct: 483 GAIRSAIATGKTHSEPLPRRIPVFILYLTAVAERD-EVFFLEDIYDRDGAVLKALNAP 539


>gi|220925145|ref|YP_002500447.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219949752|gb|ACL60144.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 426

 Score =  441 bits (1135), Expect = e-121,   Method: Composition-based stats.
 Identities = 155/375 (41%), Positives = 238/375 (63%), Gaps = 6/375 (1%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRP 101
              +     +D+  A       S+ PI+S +T+A TE+ I  Y+DI++RGGW  +     
Sbjct: 30  LTQAEWAQNYDS--ASTMRVQRSNTPILSPQTLAATEQMIERYRDIVARGGWQPVSGAER 87

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G  S +V  LR+RLI SGDLDP+ G S  +D+YVE+ V+ FQ RHGL+ +G ++ +T
Sbjct: 88  LRVGARSPAVVALRQRLITSGDLDPAAGSSPVYDSYVEAGVRRFQARHGLNQTGAMNITT 147

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++AMNVP D+R+RQL++N +R++      +G RYV+VNIPAA +E VE   V  R    V
Sbjct: 148 VQAMNVPADVRLRQLELNAVRLRSY-SGNLGARYVIVNIPAALVETVEGDHVATRHAAGV 206

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G++DRQ+PI++++I  + FNPYW +P SII+KD++  ++++P YL DN I + D   +E+
Sbjct: 207 GKIDRQSPIMNAKIQEVNFNPYWTVPASIIKKDLIPKMQKEPNYLTDNKIRIFDGD-REI 265

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
              +V+W S E   + FRQDPG   N+M   +I   + +  YMHDTP   +F +  RF +
Sbjct: 266 PPSQVNWRSDEATRYRFRQDPGVDLNSMGFVRINIPNPHGVYMHDTPAKGIFGDDFRFVS 325

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
           SGCVRV+N+ D   W+L+ TP  +   IE ++++ +    +    +PV++ YI+AWS  D
Sbjct: 326 SGCVRVQNVRDYVAWILQGTPQGNPETIEAIIQSGQRVDARPVAPIPVYWTYITAWSTPD 385

Query: 401 SIIQFRDDIYGLDNV 415
            ++QFRDDIY  D V
Sbjct: 386 GLVQFRDDIYKRDGV 400


>gi|189347548|ref|YP_001944077.1| Peptidoglycan-binding domain 1 protein [Chlorobium limicola DSM
           245]
 gi|189341695|gb|ACD91098.1| Peptidoglycan-binding domain 1 protein [Chlorobium limicola DSM
           245]
          Length = 560

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 122/377 (32%), Positives = 193/377 (51%), Gaps = 6/377 (1%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSV 109
           R  N LA        D         A+ +K +A Y+ I   GGW ++P       G    
Sbjct: 175 RLQNALAAGRPKAALDELRPKHSGYAELKKGLARYRVIARAGGWQKVPEGDSFREGVRDS 234

Query: 110 SVQRLRERLIISGDLDPS-KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            V  LR+RL  SGDL       S  + A + +AVK FQ R+GL   G+  ++T+  +N+ 
Sbjct: 235 RVPLLRKRLQQSGDLPGGVTDSSKVYTAAMANAVKRFQKRNGLSVDGVAGTATIGEINIS 294

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
              R+ Q+++NL R +  +   +   YVLVNI   +L+ +ENG+    + VIVG+  R+T
Sbjct: 295 AAERVDQIRLNLERYRWFVN-DLEPTYVLVNIAGFTLQYIENGRYRWGTRVIVGQPYRET 353

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P+  + +  I+FNP WVIP +I+ +D +  +R    YL    + +ID +G+ V    V+W
Sbjct: 354 PVFKADMQYIVFNPQWVIPPTILAEDALPAIRNSRSYLDRKKLRVIDSRGRVVDPASVNW 413

Query: 289 NSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           +     NF +R  Q  G   A+   K    +++  Y+HDTP   LF    R  +SGC+RV
Sbjct: 414 SGYSAANFPYRLQQTAGDHGALGRIKFMMPNKHVIYLHDTPTKNLFEKSERTFSSGCIRV 473

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
            N +DL   +L+D+  W++  I+  + T KT+ V L   +PV  +Y++A   +   IQFR
Sbjct: 474 ENPLDLAQLVLQDSVKWNKTSIDSTIGTGKTSTVNLPKRIPVFLLYLTA-IAEGEEIQFR 532

Query: 407 DDIYGLDNVHVGIIPLP 423
            D+Y  D+     +  P
Sbjct: 533 RDVYNRDDRLRKALDSP 549


>gi|78186201|ref|YP_374244.1| hypothetical protein Plut_0313 [Chlorobium luteolum DSM 273]
 gi|78166103|gb|ABB23201.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
          Length = 546

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 128/362 (35%), Positives = 193/362 (53%), Gaps = 7/362 (1%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS- 127
           +         +A+A Y+ I + GGWP LP  P L  G  S  V  LR RL I GDL+ + 
Sbjct: 179 LRHPKYRMLRRALARYRAIAASGGWPVLPPGPALTPGMQSSRVPALRRRLAIVGDLESTL 238

Query: 128 -KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
            +  S  FD  +  AV+ FQ RHG+   G+    T  AMNVP  +R+  L+VNL R +  
Sbjct: 239 IRDSSTVFDPELSLAVRRFQERHGITVDGVPGLETRSAMNVPASVRVECLKVNLERYRWF 298

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           L   +   YVLVNI   SL+ VE+G+    + VIVGR  R+TP+  + +  ++FNP WV+
Sbjct: 299 LS-DLDSTYVLVNIAGFSLQYVEDGEFRWATRVIVGRPYRKTPVFKADMKAVVFNPRWVV 357

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGK 304
           P +I+++D +  +R+DP +L+ N+I +ID  G+ V    VDW++     F +R  Q  G 
Sbjct: 358 PPTILKQDALPAIRKDPGWLRANHISVIDRNGRTVDPISVDWSARSAATFPYRLQQAAGD 417

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
             A+   K    +    Y+HDTP+  LF    R  +SGC+RV N   L   +L D+  WS
Sbjct: 418 DGALGRLKFLLPNPYLVYLHDTPKRELFLQSARTFSSGCIRVENPRRLAQLVLADSVRWS 477

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
              I+  + T +T  + L   VPV  +Y++A +  +  + FR+D+Y  D   +  +  P 
Sbjct: 478 PEQIDAQIDTGRTRTISLPKPVPVLILYLAAMAEGE-RVLFRNDVYRRDTAVLQALQAPL 536

Query: 425 DH 426
            H
Sbjct: 537 PH 538


>gi|119357927|ref|YP_912571.1| peptidoglycan binding domain-containing protein [Chlorobium
           phaeobacteroides DSM 266]
 gi|119355276|gb|ABL66147.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 563

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 118/376 (31%), Positives = 194/376 (51%), Gaps = 8/376 (2%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQR 113
              R+   +D   P        + +K +A Y+ I+  GGW ++   + +  G+    V++
Sbjct: 184 AAERIAGLLDELSP--RHPGYERMKKGLAHYRVIVKTGGWQKVTEGKKIKEGDRDNRVRQ 241

Query: 114 LRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           +R RL  SGDL   S   S  F   +  AV  FQ R+GL   G   + T+  MN+    R
Sbjct: 242 IRRRLQESGDLVFRSADTSRVFSKAMADAVVRFQKRNGLSVDGAAGAETIREMNISAAER 301

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           I Q+++N+ R +  +   +  R VLVNIP  +L+ ++NG+    + VIVG+  R+TP+  
Sbjct: 302 IEQIRINMERYRWFI-GDLEQRAVLVNIPGFTLQYIDNGQPRWETRVIVGKTGRETPLFK 360

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           + +  I+FNP WVIP +I+ KD +  +R+   YL   N+ +ID  G+ V    V+W+   
Sbjct: 361 ADMQYIVFNPQWVIPPTILAKDALPGIRKSRSYLYSRNLKVIDRNGRVVDPATVNWSQYT 420

Query: 293 PPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
             N  +R  Q  G   ++   K    +++  Y+HDTP   LF    R  +SGC+RV+N +
Sbjct: 421 AANLPYRLQQTAGDHGSLGRIKFMLPNKHIVYLHDTPHKELFQKSTRNFSSGCIRVQNPL 480

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           +L   +L+D+  W+   I   +KT KT+ V L   +PV+ +Y++A+   D  I FR D+Y
Sbjct: 481 ELAELVLQDSVKWNSDAINAAIKTGKTSNVNLPKHIPVYLLYLTAFPQDD-AIHFRGDVY 539

Query: 411 GLDNVHVGIIPLPEDH 426
             DN  +  +      
Sbjct: 540 NRDNDVLKALNKSLPE 555


>gi|110596970|ref|ZP_01385260.1| Peptidoglycan-binding domain 1 [Chlorobium ferrooxidans DSM 13031]
 gi|110341657|gb|EAT60117.1| Peptidoglycan-binding domain 1 [Chlorobium ferrooxidans DSM 13031]
          Length = 560

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 125/398 (31%), Positives = 203/398 (51%), Gaps = 6/398 (1%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
           P+       I +    + +  R  N +    +          +    Q  K +   + + 
Sbjct: 161 PVSLDPNWNINDFHRSTAMEFRLQNAVTAERIAGVLAELRPQRPEYLQLRKGLIRDRALA 220

Query: 90  SRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-SKGLSVAFDAYVESAVKLFQM 147
             GGWP +P +  L  G +   V  LR+RL++SGD+   +   S  +D  +  AVK FQ 
Sbjct: 221 KEGGWPVVPDLTGLKEGATDNRVLPLRKRLVVSGDMTAVANDTSRIYDRRMVEAVKRFQK 280

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           R+G+   G+   +T  AMN+PV+ RI Q+++NL R +  +   +   YVLVNI   SL  
Sbjct: 281 RNGMVADGVPGPATFRAMNLPVERRIEQIRINLERCRWFMN-DLEPTYVLVNIAEFSLRY 339

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           VE+G+    + VIVG+  R+TP+  + +  I+FNP WV+P +I+ KD++  +R++  YL 
Sbjct: 340 VEHGRNRWGTRVIVGQPYRETPVFKADMQYIIFNPRWVVPPTILAKDVLPAIRKNSSYLS 399

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHD 325
              ++++D  G  V    V+W+     NF +R  Q  G   A+   K    +R+  Y+HD
Sbjct: 400 RKKLNILDRNGTVVNPASVNWSQYTGANFPYRLQQTAGDHGALGRIKFMLPNRHTVYLHD 459

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
           TP   LF    R  +SGC+RV N  +L   +L+D+  WSR  I+  + T KT  V L   
Sbjct: 460 TPTKDLFEKSSRTFSSGCIRVENPQELARLVLQDSLKWSRERIQAAINTGKTATVYLPKR 519

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           +PV  +Y++A++  D  I F DD+Y  D+  +  +  P
Sbjct: 520 IPVFILYLTAFAEGD-EIVFLDDVYNRDSAVLKALDKP 556


>gi|188580628|ref|YP_001924073.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179344126|gb|ACB79538.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 434

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 149/355 (41%), Positives = 228/355 (64%), Gaps = 4/355 (1%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGD 123
           S  PI+S +TIA TE  +  Y+ I+SRGGW  +     L +G+   +V  +R+RLI++GD
Sbjct: 54  SSTPILSPDTIAATEAMVEKYRAIVSRGGWQAVTGAAGLRVGSRGPAVAAVRQRLIVTGD 113

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           LD + G +  +D+YV + VK FQ RHGL  +G +  +T  AMNVP D+R+RQL+ N++R+
Sbjct: 114 LDATAGGAGVYDSYVAAGVKRFQARHGLSQTGQMSPATQAAMNVPADVRLRQLETNVIRL 173

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +      +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++   I FNP 
Sbjct: 174 RSY-SGDLGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNAKAVEINFNPT 232

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P SI++KD++  +++DP YL DN I ++   G+E+    V+WNS E   + +RQD G
Sbjct: 233 WTVPASIVRKDLIPKMQKDPNYLTDNKIRILSG-GQEISPRSVNWNSDEGTRYTYRQDSG 291

Query: 304 KI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
              N+M   +I   + +  +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP 
Sbjct: 292 ADFNSMGVVRINIPNPHGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLKDTPG 351

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           W R H+E+ V++ +    +L   VPV++ YI+AW+  D  +QFRDDIY  D V+V
Sbjct: 352 WDRAHVEQAVESGQRIDARLTQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNV 406


>gi|304393662|ref|ZP_07375590.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303294669|gb|EFL89041.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 527

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 107/407 (26%), Positives = 184/407 (45%), Gaps = 7/407 (1%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE 79
           L +GL L       SV D  I          ++        +               Q  
Sbjct: 121 LKLGLDLYSGFTTPSVSDPNIVIKRKKRDATQWLEGATATGVSAMLTTLRPRHPQYGQLR 180

Query: 80  KAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           + +A Y+ +++RGGW  +     L  G +   V  +R+ L   G        +  +D  +
Sbjct: 181 QMLAGYRSLMARGGWQPITEGITLKPGMTDARVNEMRQNLAARGYDVRGVEFADLYDEGL 240

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
             AVK FQ RHGL   G+   ++  A++V    R+ Q+ +NL R +  L + +G  +VLV
Sbjct: 241 VDAVKHFQKRHGLASDGVAGPASFRALSVTAAQRVDQIAINLERWR-WLPRDLGKAHVLV 299

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           N     +  +   ++  +  VIVG+   Q+P+  S I+   FNP W +P SI  K+M+  
Sbjct: 300 NQAGFEMFTMNGTEIYDKRRVIVGKPFHQSPMFSSSISYAEFNPTWTVPLSIAGKEMLPK 359

Query: 259 LRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKI 313
           +R +P YL + N  +    G    ++    VDW++     F +R  Q+PG  NA+   K 
Sbjct: 360 IRNNPAYLVEKNYSLYSGWGNNSQKLNPYAVDWSAVSAKRFPYRIVQEPGPRNALGQVKF 419

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F ++ + Y+HDTP   LF+   R  + GC+RV   +D    L +     +   +  +++
Sbjct: 420 IFPNKFSVYLHDTPSRNLFSRTGRAFSHGCIRVDKPLDFARKLYELQGGMNPSQVTPIIE 479

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           ++K   V    ++PVH  Y +AW  +D +  F +D+Y  D +    +
Sbjct: 480 SKKRKRVNFKRKMPVHLAYFTAWINEDGVPLFYEDVYKRDKLVRKFL 526


>gi|328544358|ref|YP_004304467.1| peptidoglycan binding domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326414100|gb|ADZ71163.1| Putative peptidoglycan binding domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 543

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 119/405 (29%), Positives = 183/405 (45%), Gaps = 7/405 (1%)

Query: 23  GLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
              LV   +  + +++ +N   +     D  +      D G   D    +    A+ ++A
Sbjct: 137 ATHLVSGRVQPNAVNKALNIFPHVPDAGDLLEAVAEAPDFGAFLDGLSPNTPNYARLKQA 196

Query: 82  IAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           +A Y+   + GG+  +P    L  G S   +  LR R+     L P       +D  +  
Sbjct: 197 LAAYRAKAAAGGFTPVPDGAVLKPGMSDPRLDVLRRRMEQQDYLAPGAHAGDVYDGALVE 256

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ  HGL   G+V   TL  MNVP+  R+ Q+++N+ R ++ +   +G  YV VN+
Sbjct: 257 AVKTFQDYHGLAVDGVVGKDTLAEMNVPIGRRLIQMELNMER-RRWMPDDLGEAYVFVNL 315

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
              +L+ V +GK    + V+VG+    TP+    +  +  NPYW +P SI   + +  L 
Sbjct: 316 ADQNLKVVRDGKTVHTARVVVGKPYHATPVFSKDMTYVEVNPYWNVPPSIATNEYLPKLI 375

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSR 318
            +P+ L   NI +      EV   ++ W S     F F  RQDPG  NA+   K  F + 
Sbjct: 376 SNPRALDGQNIRVFSGD-AEVSPHQIAWASYSGGPFPFKLRQDPGDGNALGRIKFMFPNE 434

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
            N Y+HDTP   LF    R  + GC+RV +   L   LL D     R  ++    +    
Sbjct: 435 FNIYIHDTPSRALFERAQRSFSHGCIRVSDPFALAEVLLADQ-GLDRAALDRAKASGDRQ 493

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
            + L   +PVH  Y++AW  KD    FR DIYG D V    +   
Sbjct: 494 VITLRRPIPVHLTYLTAWMNKDGSTHFRKDIYGRDEVLQKALARA 538


>gi|83647078|ref|YP_435513.1| hypothetical protein HCH_04383 [Hahella chejuensis KCTC 2396]
 gi|83635121|gb|ABC31088.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 560

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 114/386 (29%), Positives = 188/386 (48%), Gaps = 14/386 (3%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR 100
            E     +  R    LA   +  D +  + + E      + +   ++  ++GGWP +   
Sbjct: 156 EERTTGELAPRLYQALAEDRLLEDMNAMVPTPEVYKGLSQLLTDLRETEAQGGWPMVSYG 215

Query: 101 P-LHLGNSSVSVQRLRERLIISGDLDPSK------GLSVAFDAYVESAVKLFQMRHGLDP 153
           P L  G S   V  LR RLI SGD++              FD  +  AV+ FQ RHGL P
Sbjct: 216 PTLRPGQSDSRVIELRRRLIASGDMERPVIDTSEGDDETLFDEGLVKAVRFFQERHGLKP 275

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
             +V   TL  +N P+  RI Q++ NL R ++     +G RYV+VNI    L+ V++G+ 
Sbjct: 276 DAIVGKETLAMLNTPISERIEQVRSNLER-RRWTPTNLGDRYVVVNIADYRLDLVDHGRT 334

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L   V+VG+  R+TP     +  ++ NP W +P  I ++DM+    +DP+++      +
Sbjct: 335 ELSMRVVVGKPYRRTPAFSGLMTYLVVNPLWEVPTQIAEEDMLERFIEDPEFINKMGFRV 394

Query: 274 IDEKGKE---VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
               G+E   +  E ++W   +   F +R  Q  G +NA+   K  F +  N Y+HDTP 
Sbjct: 395 YKGWGREEAALDPETINWEEVKGGKFPYRLQQAAGPMNALGRIKFMFPNEFNVYLHDTPS 454

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGC+R+   ++L   L+  +   +   +++++ + + T ++L   VPV
Sbjct: 455 RSLFYKSQRAFSSGCIRLERPLELAAALIG-SKRKTGIELDKILASGEPTTLRLPRPVPV 513

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDN 414
           H  Y +AW     + QFR D+YG D 
Sbjct: 514 HLQYWTAWMDDSGVAQFRKDVYGRDA 539


>gi|240137931|ref|YP_002962403.1| putative Peptidoglycan-binding protein [Methylobacterium extorquens
           AM1]
 gi|240007900|gb|ACS39126.1| putative Peptidoglycan-binding protein [Methylobacterium extorquens
           AM1]
          Length = 434

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 147/355 (41%), Positives = 226/355 (63%), Gaps = 4/355 (1%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGD 123
           S  PI+S +TIA TE     Y+ I+SRGGW  +     L +G+   +V  +R+RLI++GD
Sbjct: 54  SSTPILSPDTIAATESMAEKYRAIVSRGGWQNVSGAAGLRVGSRGPAVAAVRQRLIVTGD 113

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           LD + G +  +D+YV + VK FQ RHGL  +G +  +T  AMNVP ++R+RQL+ N++R+
Sbjct: 114 LDATAGGAGVYDSYVAAGVKRFQARHGLSQTGQMSPATQAAMNVPAEVRLRQLETNVIRL 173

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +      +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++  +I FNP 
Sbjct: 174 RSY-SGDLGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNTKATQINFNPT 232

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P SI++KD++  +++DP YL DN I ++   G+E+    V+WNS E   + +RQD G
Sbjct: 233 WTVPASIVRKDLIPKMQKDPNYLTDNKIRILSG-GQEISPRSVNWNSDEGTRYTYRQDSG 291

Query: 304 KI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
              N+M   +I   + +  +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP 
Sbjct: 292 ADFNSMGVVRINIPNAHGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLKDTPG 351

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           W R  +E+ V++ +     L   VPV++ YI+AW+  D  +QFRDDIY  D V+V
Sbjct: 352 WDRTRVEQAVESGQRIDATLTQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNV 406


>gi|163850806|ref|YP_001638849.1| peptidoglycan binding domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|218529626|ref|YP_002420442.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|254560490|ref|YP_003067585.1| peptidoglycan-binding protein [Methylobacterium extorquens DM4]
 gi|163662411|gb|ABY29778.1| Peptidoglycan-binding domain 1 protein [Methylobacterium extorquens
           PA1]
 gi|218521929|gb|ACK82514.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|254267768|emb|CAX23615.1| putative Peptidoglycan-binding protein [Methylobacterium extorquens
           DM4]
          Length = 434

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 147/355 (41%), Positives = 226/355 (63%), Gaps = 4/355 (1%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGD 123
           S  PI+S +TIA TE     Y+ I+SRGGW  +     L +G+   +V  +R+RLI++GD
Sbjct: 54  SSTPILSPDTIAATESMAEKYRAIVSRGGWQNVSGAAGLRVGSRGPAVAAVRQRLIVTGD 113

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           LD + G +  +D+YV + VK FQ RHGL  +G +  +T  AMNVP ++R+RQL+ N++R+
Sbjct: 114 LDATAGGAGVYDSYVAAGVKRFQARHGLSQTGQMSPATQAAMNVPAEVRLRQLETNVIRL 173

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +      +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++  +I FNP 
Sbjct: 174 RSY-SGDLGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNTKATQINFNPT 232

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P SI++KD++  +++DP YL DN I ++   G+E+    V+WNS E   + +RQD G
Sbjct: 233 WTVPASIVRKDLIPKMQKDPNYLTDNKIRILSG-GQEISPRSVNWNSDEGTRYTYRQDSG 291

Query: 304 KI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
              N+M   +I   + +  +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP 
Sbjct: 292 ADFNSMGVVRINIPNAHGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLKDTPG 351

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           W R  +E+ V++ +     L   VPV++ YI+AW+  D  +QFRDDIY  D V+V
Sbjct: 352 WDRTRVEQAVESGQRIDATLTQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNV 406


>gi|170741295|ref|YP_001769950.1| peptidoglycan binding domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168195569|gb|ACA17516.1| Peptidoglycan-binding domain 1 protein [Methylobacterium sp. 4-46]
          Length = 426

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 155/375 (41%), Positives = 240/375 (64%), Gaps = 6/375 (1%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRP 101
              +     +D+  A       S+ PI+S +T+A TE+ I  Y+DI++RGGW  +     
Sbjct: 30  LAQAEWAQNYDS--AATMRVQRSNTPILSPQTLAATEQMIERYRDIVARGGWQPVSGADR 87

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G  S +V  LR+RLI+SGDLDP+ G S  +D+YVE+ V+ FQ RHGL+ +G ++ +T
Sbjct: 88  LRVGTKSPAVVALRQRLIVSGDLDPAAGSSPIYDSYVEAGVRRFQARHGLNETGAMNLTT 147

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++AMNVP D+R+RQL++N +R++      +G RYV+VNIPAA +E VE   V  R    V
Sbjct: 148 VQAMNVPADVRLRQLELNAVRLRSY-SGNLGARYVIVNIPAALVETVEGDHVATRHAAGV 206

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G++DRQ+PI++++I  + FNPYW +P SII+KD++  ++++P YL DN I + D + +E+
Sbjct: 207 GKIDRQSPIMNAKIQEVNFNPYWTVPASIIKKDLIPKMQKEPNYLTDNKIRIFDGE-REI 265

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
              +V+W S E   + FRQDPG   N+M   +I   + +  YMHDTP   +F +  RF +
Sbjct: 266 APSQVNWRSDEATRYRFRQDPGVDLNSMGFVRINIPNPHGVYMHDTPAKGIFGDDFRFVS 325

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
           SGCVRV+N+ D   W+L+ TP  +   IE ++++ +    +    +PV++ YI+AWS  D
Sbjct: 326 SGCVRVQNVRDYVAWILQGTPQGNPETIEAIIQSGQRVDARPLAPIPVYWTYITAWSTPD 385

Query: 401 SIIQFRDDIYGLDNV 415
            ++QFRDDIY  D V
Sbjct: 386 GLVQFRDDIYKRDGV 400


>gi|283833784|ref|ZP_06353525.1| putative periplasmic protein [Citrobacter youngae ATCC 29220]
 gi|291070449|gb|EFE08558.1| putative periplasmic protein [Citrobacter youngae ATCC 29220]
          Length = 583

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 124/431 (28%), Positives = 200/431 (46%), Gaps = 45/431 (10%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           ++GYL        K N  LY    Y++    +S             +IN+   ++ N + 
Sbjct: 162 LMGYLHFIANIPVKGNHWLYSNKPYVLATPPIS-------------VINQWQVALDNGQL 208

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSV 111
            +F+A +                A   +++   + +     WP+L     L  G  S  +
Sbjct: 209 TSFIAGLAPQ---------HPQYAAMHESL--LKLVSDTRPWPQLTSTSTLRPGEWSNDI 257

Query: 112 QRLRERLIISGDLD-----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             LRE L  +G L+      +K    A+ + +  AVK FQ   GL   G +  +T + +N
Sbjct: 258 PALREILRRTGMLESVVSTAAKEGRSAYGSELVEAVKRFQTWQGLGADGAIGPATRDWLN 317

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
           V    R   L +N+ R++ LL   +    ++VNIPA SL   +NG   L S VIVGR DR
Sbjct: 318 VTPAQRAGVLALNIQRLR-LLPGDLS-TGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDR 375

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVE 284
           +TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   ++     +  +   
Sbjct: 376 KTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKETIDPW 435

Query: 285 EVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
           +VDW +    N  FR  Q PG  N++   K    S +  Y+HDTP   LF    R  +SG
Sbjct: 436 QVDWATITASNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDTRALSSG 495

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           CVRV    +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D  
Sbjct: 496 CVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVGADGR 554

Query: 403 IQFRDDIYGLD 413
            Q+R DIY  D
Sbjct: 555 TQYRTDIYNYD 565


>gi|309389689|gb|ADO77569.1| ErfK/YbiS/YcfS/YnhG family protein [Halanaerobium praevalens DSM
           2228]
          Length = 546

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 121/409 (29%), Positives = 206/409 (50%), Gaps = 14/409 (3%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL---ARVDMGIDSDIPIISKETIA 76
           L +    +   I+A ++ E  N    S+ + +  N L     ++  ++S++P    +   
Sbjct: 133 LDLASDYLNGKINAEIIIEDNNYQADSLQSKKLLNALLAKENIEESLNSNLP--KTKAYQ 190

Query: 77  QTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AF 134
           +  + + +Y+D      WP++  +  L   +  V V+ LR+ L     L  +       F
Sbjct: 191 KLREKLFYYRDSGQINAWPQIKGKQILTKNSKGVRVKELRQNLKAKNYLTENNSKQDYIF 250

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
              ++ AV  FQ+ +GL P G+V   TL+A+N+P+  RI+QL VN+ R +  L + +G R
Sbjct: 251 TEQLKEAVMKFQVDYGLTPDGVVGPKTLKALNIPLSERIKQLIVNMERWR-WLPENLGDR 309

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y+ VNI    L+  E  +  +    IVG+  R TP+    I  ++ NPYW +P +I  +D
Sbjct: 310 YIYVNIANYKLKLYEEQQKIMEMKTIVGKKQRSTPVFSDEIKYLVLNPYWYVPHTIAVED 369

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGK----EVFVEEVDWNSPEPPNFIF--RQDPGKINAM 308
            + L+++D  YL+D N  +    G     ++   +VDW      NF +  RQ+PG  NA+
Sbjct: 370 KLPLIKKDLNYLEDKNYSLFKYIGNNRLEKIDPTKVDWTKITKDNFNYLLRQNPGDQNAL 429

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F ++ + Y+HDTP   LF+   R  +SGC+R+   I+L  +LL D   W R +I
Sbjct: 430 GRIKFMFPNKFSIYLHDTPSQYLFSEQERSFSSGCIRIEKPINLAEYLLIDQEKWGRENI 489

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           E  +K  K   V L   + ++  Y +AW  K++ + FR+DIY  D   +
Sbjct: 490 EAAIKKDKEKIVYLKKPIKIYLQYNTAWVDKENNLNFREDIYNRDQKII 538


>gi|161503876|ref|YP_001570988.1| hypothetical protein SARI_01965 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865223|gb|ABX21846.1| hypothetical protein SARI_01965 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 644

 Score =  436 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 127/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K N+ LY    Y++    +S             +IN+   ++   + 
Sbjct: 186 MMGYLHFIANIPVKGNRWLYSNKPYVLATPPVS-------------VINQWQIALEEGQL 232

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A   +A+     +     WP+L     L  G  S  V
Sbjct: 233 PTFVASLAPQ---------NPQYAPMHEALLKL--VADSRPWPQLTNTATLRPGQWSNDV 281

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 282 PALREILQRTGMLDGGPKIALPGDDTSDSAVVSPSAVEVETLVAQPVAEQTARRSKPAPA 341

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  +
Sbjct: 342 VRAAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAE 401

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 402 L--STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 459

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  
Sbjct: 460 LARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAR 519

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+ 
Sbjct: 520 NSLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKAPELANMLLQDA-GWND 578

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 579 ARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 626


>gi|77918680|ref|YP_356495.1| hypothetical protein Pcar_1075 [Pelobacter carbinolicus DSM 2380]
 gi|77544763|gb|ABA88325.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 598

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 111/359 (30%), Positives = 185/359 (51%), Gaps = 9/359 (2%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS-V 132
             +    +A Y+ +   GGWP L   P +  G+    +  LR  L++ GDL+ S+  S  
Sbjct: 213 YQRLAVYLAHYRQLALGGGWPVLADGPPVRPGDRDARLPALRRFLVLVGDLESSRQSSGW 272

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
             DA   +A+K FQ+RHGL   G++   TL  +NVPV  RI QL +NL R +   +Q  G
Sbjct: 273 RMDAVTVAALKRFQVRHGLRADGVLGKDTLAQINVPVGRRIEQLGLNLERER-WPKQDAG 331

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RY+ V+I   +L  V+ G+  +R  V+VG   R+TP+  + +  ++F PYW +P +I++
Sbjct: 332 DRYLQVDITDFTLTLVDGGREIMRMPVVVGTSFRRTPVFSALMTYLVFAPYWTVPPTILE 391

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSPEPPNFI--FRQDPGKINA 307
           +D + +++ +P YL  ++  ++       + +    +DW +    +F    RQ PG  N 
Sbjct: 392 QDKLPVIKANPDYLDSHHYEIVAWGKDPNRTIDAASIDWKTITAKSFPGMLRQKPGPWNP 451

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F +  + Y+HDTP   LF    R  +SGC+R+   ++L ++LL     W    
Sbjct: 452 LGKVKFMFPNAYHVYLHDTPAQYLFAKQQRTFSSGCIRIARPLELAIYLLDGQKGWDSER 511

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP-LPED 425
           I++ +   K   V+L   +PVH +Y +AW      +QFR+D+Y  D      +   PE 
Sbjct: 512 IKKEMAASKPYTVRLKNPIPVHILYRTAWVDVQGRLQFRNDVYERDQELQAALKQRPES 570


>gi|295096375|emb|CBK85465.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 607

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 132/471 (28%), Positives = 206/471 (43%), Gaps = 70/471 (14%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N+ LY    Y +    LS             +IN+   S+ N   
Sbjct: 162 MMGYLQFVAGISVNGNRWLYSSKPYKLATPALS-------------VINQWQLSLDNGEL 208

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A   +++   + +     WP+L     L  G  S  V
Sbjct: 209 PRFIASLAPA---------HPQYATMHQSL--LELVADSRPWPQLRGTTTLRPGQWSSDV 257

Query: 112 QRLRERLIISGDLDPSKGL-----------------------------SVAFDAYVESAV 142
             +RE +  SG LD    +                               A+D  + +AV
Sbjct: 258 PAIREIMKRSGILDSGPKIALPGDETQNAVVSPSAPVKEKTAVALSNKPAAYDRELVAAV 317

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           K FQ   GL   G++  ST + +NV    R   L +N+ R++ LL   +    ++VNIPA
Sbjct: 318 KQFQAAQGLGADGVIGPSTRDWLNVSPAQRAGVLALNIQRLR-LLPGTLS-TGIMVNIPA 375

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            SL   ++G   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  D
Sbjct: 376 YSLVYYQDGSEVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWND 435

Query: 263 PQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSR 318
           P YL+ +N  ++     +  +    VDW++  P N  FR  Q PG  N++   K    S 
Sbjct: 436 PGYLERHNYTVMRGWNSKEAIDPWMVDWSTITPSNLPFRFQQAPGAHNSLGRYKFNMPSS 495

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I + +K   T 
Sbjct: 496 DAIYLHDTPNHNLFQKDARALSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTR 554

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
            V +   +PV+  Y++A+   D   Q+R DIY  D     G   LP+   +
Sbjct: 555 YVNIRHNIPVNLYYLTAFVGADGRTQYRTDIYNYDLTARSGAQILPKAEQL 605


>gi|308273623|emb|CBX30225.1| hypothetical protein N47_D30340 [uncultured Desulfobacterium sp.]
          Length = 564

 Score =  435 bits (1118), Expect = e-120,   Method: Composition-based stats.
 Identities = 120/424 (28%), Positives = 207/424 (48%), Gaps = 18/424 (4%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVL--DEIINESYHSIVNDRFDNFLARVDMGIDSDIPII 70
            FF+Y        L    ++   +  D  I   +  +V    D             +   
Sbjct: 144 AFFLY-----ASHLTAGRVNPENIRTDWTIKTKHLDLVPILLDALAKGNISYALEKVNQQ 198

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKG 129
           S +   + + A   Y+     GGWP++P  P +  G+    +  L  RL ISGDL  +  
Sbjct: 199 SPD-YQRLKIASQSYKKFSENGGWPQIPAGPKMKKGDRGARIAILHSRLQISGDLSKTDK 257

Query: 130 LSV-AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
                F   +E AV  FQ RHGL   G+V  +TL  +NV    R +Q+ VN+ R++  L+
Sbjct: 258 KDPGVFGDILEKAVLRFQSRHGLTEDGIVGHATLYELNVSALARFKQIMVNMERLR-WLQ 316

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           +  G RY+ VNI    L  V+     L+  V+VG+  RQTP+   ++  ++ NP+W IP 
Sbjct: 317 RDFGPRYLFVNIADFKLSVVDENASILKMRVVVGKDYRQTPVFEGKMTYLVINPFWTIPP 376

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR--QDPG 303
            + ++D++ L+++D + +K   I + +      +E+    V+W      NF ++  Q+PG
Sbjct: 377 KLAEEDLLPLIKEDIEVIKRKKIRIYESWKENAREIDPGSVNWKMVNADNFSYKLVQEPG 436

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            +NA+   K  F ++ + Y+HDTP   LF+   R  +SGC+R+   ++L  +LL   P W
Sbjct: 437 PLNALGRIKFIFPNKFDIYLHDTPARNLFSREKRNFSSGCIRIEKPLELATYLLHGNPNW 496

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII--P 421
           ++  + +V+ + +T  V ++  + V  +Y +AW  +  I+QFR+DIY  D      +   
Sbjct: 497 TKQKLLDVIDSHETQIVGISNPIAVKILYFTAWVDEQGIVQFRNDIYQRDKKLAKALEEK 556

Query: 422 LPED 425
            P+D
Sbjct: 557 PPQD 560


>gi|238920326|ref|YP_002933841.1| peptidoglycan-binding domain 1 protein [Edwardsiella ictaluri
           93-146]
 gi|238869895|gb|ACR69606.1| peptidoglycan-binding domain 1 protein [Edwardsiella ictaluri
           93-146]
          Length = 544

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 118/431 (27%), Positives = 191/431 (44%), Gaps = 42/431 (9%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         +  LY    Y +    + LV+                 ++   + 
Sbjct: 125 MMGYLQYVAGVTANGDAWLYGNKSYTLAAPPVGLVDN-------------WQRALRQGKL 171

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
             F+  +           S         A+   + +     WP++P  P L  G+SS +V
Sbjct: 172 TVFIRSLAP---------SNPQYLAMRSALE--RLLADTTPWPQMPGGPTLRPGDSSPAV 220

Query: 112 QRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
             LRE L+ SG L  +  G    +   + +AVK FQ   GL P G++   T   +NV   
Sbjct: 221 APLREILLRSGALPATDEGDGNVYTPALVAAVKRFQSGQGLTPDGVIGPRTYAWLNVTPS 280

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
           +R   L +N+ R++ L         ++VNIP  S+     GK  L S VIVGR  R+TP+
Sbjct: 281 MRASLLALNIQRLRLLPASV--YTGIMVNIPNYSMTYFREGKDVLSSRVIVGRPARKTPL 338

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVD 287
           ++S +N ++ NP W +P  ++++D++    +DP Y + +   ++       + +    +D
Sbjct: 339 MNSELNNVVVNPPWNVPTKLVREDIVPKAMRDPGYFERHGYTLLSGWSGDVQVINPYMLD 398

Query: 288 WNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           W+S    NF +  RQ PG  N++   K    S++  Y+HDTP   LFN  +R  +SGCVR
Sbjct: 399 WSSVSARNFPYRVRQAPGAGNSLGRFKFNMPSQDAIYLHDTPNHALFNQDIRALSSGCVR 458

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           +     L   LL D   WS   +   ++   T  V +   +PV   Y + W       QF
Sbjct: 459 INKASTLADMLLADA-GWSPERVASALQAGNTQYVPIRQRIPVRLYYQTVWVSDGGEPQF 517

Query: 406 RDDIYGLDNVH 416
           R DIY  D + 
Sbjct: 518 RTDIYNYDQLA 528


>gi|168243764|ref|ZP_02668696.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|194449643|ref|YP_002044987.1| hypothetical protein SeHA_C1093 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194407947|gb|ACF68166.1| YcbB [Salmonella enterica subsp. enterica serovar Heidelberg str.
           SL476]
 gi|205337184|gb|EDZ23948.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
          Length = 606

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 126/458 (27%), Positives = 195/458 (42%), Gaps = 72/458 (15%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD--------------------------------PSKGLSVAFDAYVE 139
             LRE L  +G LD                                     + A+D  + 
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTTDSAVVSPSAVVDEQTARRSKPAPAARAYDRELV 313

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  +      ++VN
Sbjct: 314 EAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVN 371

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +
Sbjct: 372 IPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKV 431

Query: 260 RQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEF 315
             DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N++   K   
Sbjct: 432 WNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNM 491

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I   +K  
Sbjct: 492 PSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQG 550

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 DTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 588


>gi|168466590|ref|ZP_02700452.1| YcbB [Salmonella enterica subsp. enterica serovar Newport str.
           SL317]
 gi|195631019|gb|EDX49605.1| YcbB [Salmonella enterica subsp. enterica serovar Newport str.
           SL317]
          Length = 614

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/466 (27%), Positives = 197/466 (42%), Gaps = 80/466 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD----------------------------------------PSKGLS 131
             LRE L  +G LD                                        P+  + 
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDETSVAHDEPTARRSKPAPSVR 313

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
            A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  +  
Sbjct: 314 AAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL- 372

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 373 -STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 431

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N+
Sbjct: 432 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 491

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 492 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 550

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 596


>gi|296103072|ref|YP_003613218.1| hypothetical protein ECL_02728 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057531|gb|ADF62269.1| hypothetical protein ECL_02728 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 607

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 131/471 (27%), Positives = 207/471 (43%), Gaps = 70/471 (14%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N+ LY    Y +    LS             +IN+   ++ N   
Sbjct: 162 MMGYLQFVAGIPVNGNRWLYSQKPYKLATPALS-------------VINQWQLALDNGDL 208

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A   +++   + +     WP++     L  G  S  V
Sbjct: 209 PRFIASLAPA---------HPQYATMHQSL--LELVADSRPWPQVRGTTTLRPGQWSSDV 257

Query: 112 QRLRERLIISGDLDPSKGL-----------------------------SVAFDAYVESAV 142
             +RE +  SG L+    +                               A+D  + +AV
Sbjct: 258 PAIREIMKRSGILESGPKIALPGDDTQSAVVSPSAPVKEKKAVAQSNKPAAYDRELVAAV 317

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           K FQ   GL   G++  ST + +NV    R   L +N+ R++ LL   +    ++VNIPA
Sbjct: 318 KQFQAAQGLGADGVIGPSTRDWLNVSPAQRAGVLALNIQRLR-LLPGTLS-TGIMVNIPA 375

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  D
Sbjct: 376 YSLVYYQNGSEVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWND 435

Query: 263 PQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSR 318
           P YL+ +N  +I     +  +    VDW++  P N  FR  Q PG  N++   K    S 
Sbjct: 436 PGYLERHNYTVIRGWNSKETIDPWMVDWSTITPSNLPFRFQQAPGAHNSLGRYKFNMPSS 495

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I + +K   T 
Sbjct: 496 DAIYLHDTPNHNLFQKDARALSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTR 554

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
            V +   +PV+  Y++A+  +D   Q+R DIY  D     G   LP+   +
Sbjct: 555 YVNIRHNIPVNLYYLTAFVGEDGRTQYRTDIYNYDLTARSGAQILPKAEQL 605


>gi|332558206|ref|ZP_08412528.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides WS8N]
 gi|332275918|gb|EGJ21233.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides WS8N]
          Length = 536

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 121/408 (29%), Positives = 194/408 (47%), Gaps = 13/408 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIAQ 77
           +L     L    +    +D  I  +   +        F A     +DS  P       A+
Sbjct: 124 LLAWAHDLHGGALEPGKVDPGIKRAVKRLDPRSVLTAFEANPVHFLDSLAP--RGPDYAR 181

Query: 78  TEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             +A    +  ++ GGW   +P   L  G +      LR+RL+  G L  S   S  +DA
Sbjct: 182 LMRARLDLEATVAAGGWGAAVPAGKLKPGATGPGFLALRDRLMAMGYLGRSTAAS--YDA 239

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            V +AV+ FQ  HGL P G+    T+ A+NV  + R++ + V L R +  L    G R++
Sbjct: 240 EVAAAVRSFQTDHGLSPDGVAGEGTIAALNVAPEARLKSILVALERER-WLSIDRGERHI 298

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            VN+   S   ++NGKV   +  ++G+   D++TP     +  ++ NP W +PRSI  K+
Sbjct: 299 WVNLADFSTRLIDNGKVTFETRSVIGKDSPDQRTPEFSDEMEYMVINPSWHVPRSITTKE 358

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            + LL+++P      ++ +ID +G+EV    V++N+    NF F  RQ P   NA+   K
Sbjct: 359 YLPLLQRNPN--AAGHLKLIDSRGREVSRGAVNFNAYNARNFPFSMRQPPSDGNALGLVK 416

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F ++ N Y+HDTP   LF+  VR  + GC+R+    D    LL           +  +
Sbjct: 417 FMFPNQWNIYLHDTPSKSLFDREVRAFSHGCIRLGRPFDFAYALLAAQTEDPEGLFQSHL 476

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            + + + V+L   VPVH VY +AW+     + +RDDIYG D V    +
Sbjct: 477 SSGRESVVRLEKPVPVHLVYFTAWAGPTGQMNYRDDIYGRDGVIFDAL 524


>gi|120555804|ref|YP_960155.1| peptidoglycan binding domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325653|gb|ABM19968.1| Peptidoglycan-binding domain 1 protein [Marinobacter aquaeolei VT8]
          Length = 560

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/424 (29%), Positives = 206/424 (48%), Gaps = 25/424 (5%)

Query: 18  LILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
           L+L     L+   +H   ++   I+  + +    R     + +   + S        T+ 
Sbjct: 122 LVLSDAFLLLASHLHHGKVNPTTIHAEWTANRQQR--EMQSVLSEALASGT---VYTTLQ 176

Query: 77  QTEKAIAFYQDILSR---------GGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLD- 125
             +   A Y  ++ R           WP +   P +  G++   +  +R RL + GDL  
Sbjct: 177 DLKPRSAAYHQLVQRRKALGELISADWPAIVSGPSIRPGDTDNRIPDIRRRLALLGDLSG 236

Query: 126 --PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
             P       +D  + +A+ LFQ RHGL+P G+V   TL A+N+    RI +L  NL R 
Sbjct: 237 DSPEASNHQHYDDALATAIPLFQARHGLEPDGIVGRDTLTALNLLPLERIYRLDANLERW 296

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +  L + +G  YV+VNI    L  VE+G+   R  VIVGR  RQTP+   RI  ++FNP 
Sbjct: 297 R-WLPESLGETYVVVNIAGFELVLVESGEQVHRQRVIVGRPYRQTPVFSDRIRYLVFNPT 355

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR- 299
           W +PR ++ +D + ++R DP+YL+     +    G    EV   E+DW      NF ++ 
Sbjct: 356 WTVPRKLMIEDQLPIIRSDPEYLERLGFKVFRGWGANQSEVDPAEIDWTELSKNNFPYQL 415

Query: 300 -QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            Q PG  NA+   K  F ++ + Y+HDTP   LF+ + R  +SGC+R+    +L   LL 
Sbjct: 416 IQQPGPQNALGQVKFMFPNQYDIYLHDTPAQSLFSRLERTLSSGCIRLERPFELAERLLA 475

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           +T  W++  IE+ + T +   V L+  VPV+  Y + W     ++QFR+D+Y  D   + 
Sbjct: 476 NTNGWNKKRIEQTLATAEPATVVLSEPVPVYLQYWTTWIDPAGVLQFRNDVYDRDRRLLQ 535

Query: 419 IIPL 422
            +  
Sbjct: 536 ALRA 539


>gi|260433724|ref|ZP_05787695.1| peptidoglycan-binding domain 1 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417552|gb|EEX10811.1| peptidoglycan-binding domain 1 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 535

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 116/389 (29%), Positives = 192/389 (49%), Gaps = 11/389 (2%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-P 95
           D ++ +      +D     LA  D      +   S +  A  +  +A  Q+++  GGW P
Sbjct: 141 DGLVRQVQKRSGSDLLSALLAGTDGAAIERLAPQSSQYRALLKHKLAL-QELMRHGGWGP 199

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +P      G S   V +LR+RL+  G L P+   S  +D+ +E+AV+ FQ  HGL+P G
Sbjct: 200 TVPKGKYEPGASGAGVLKLRDRLVAMGFLKPTA--SPEYDSAMEAAVRAFQRAHGLEPDG 257

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +    T+  +N     R++ + V + R +  L    G R+VLVN    S + V++G V  
Sbjct: 258 VAGEGTIAEINRSPTDRLKAVMVAMERER-WLPADRGQRHVLVNQADFSAKIVDDGNVTF 316

Query: 216 RSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            +  ++G+   DR++P     +  ++ NP W +PRSII K+ +  LR +P  +   ++ +
Sbjct: 317 ETRAVIGKNTHDRRSPEFSDEMEHMVINPSWYVPRSIITKEYLPKLRANPNAV--RHLEI 374

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            D +G++V    VD+N     +F F  RQ PG+ NA+   K  F ++ N Y+HDTP+  L
Sbjct: 375 TDSRGRQVNRAAVDFNQFSARSFPFAMRQPPGQSNALGLVKFMFPNKYNIYLHDTPQKSL 434

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F   VR  + GC+R+    +    LL       +     ++ T K T V L   VPVH +
Sbjct: 435 FAREVRAFSHGCIRLAQPFEFAYALLAPQEEDPKAFFHRILNTGKETKVDLEKPVPVHLI 494

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           Y +A+      +Q+R D+YG D      +
Sbjct: 495 YRTAYIGPKGDVQYRRDVYGRDAKIWEAL 523


>gi|99081059|ref|YP_613213.1| peptidoglycan binding domain-containing protein [Ruegeria sp.
           TM1040]
 gi|99037339|gb|ABF63951.1| Peptidoglycan-binding domain 1 [Ruegeria sp. TM1040]
          Length = 540

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 121/410 (29%), Positives = 201/410 (49%), Gaps = 13/410 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
              +   L++ P+    +DE I    H +   RF   +A           + +       
Sbjct: 130 ATDLQTGLIDTPVR---IDEGIVREKHKVDATRFLEGIATDRPAAFLQDLVPTSSQYRAL 186

Query: 79  EKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
            +     + +L  GGW   +P+R +  G++  SV  LR RL+  G L P+   S  +D  
Sbjct: 187 LREKMRLEALLQAGGWGATVPVRKIEPGDTGQSVLALRNRLVSMGYLAPTATRS--YDLD 244

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           VE AV+ FQ  HGL+  G+    TL+ +N PV  RI+ + V + R + L  ++ GLR++L
Sbjct: 245 VEDAVRRFQSEHGLEVDGVAGEGTLKELNRPVSDRIKSVLVAMERERWLTPER-GLRHIL 303

Query: 198 VNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           VN+   S + ++ G++   +  ++G  + DR+TP     ++ ++ NP W +PRSII K+ 
Sbjct: 304 VNLTDFSAKIMDEGEISFETRSVIGSTKSDRRTPEFSDEMDHMVINPSWYVPRSIITKEY 363

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKI 313
           +  L+ +P     + I + D +G+ V    VD++     +F F  RQ P   NA+   K 
Sbjct: 364 LPKLKNNPN--AHSYIEITDNRGRVVNRNNVDFSQFTARSFPFAMRQPPSSRNALGLVKF 421

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F ++ N Y+HDTP+  LF   VR  + GCVR+    +    LL       + +   V+ 
Sbjct: 422 MFPNKYNIYLHDTPQKHLFGREVRAFSHGCVRLHQPFEFAYELLTPQTENPKDYFHRVLN 481

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           + K T V L T+VPVH +Y +A+  +D   +FR D+YG D      +   
Sbjct: 482 SGKETKVPLETKVPVHLIYRTAFVSQDGRAEFRRDVYGRDAKIWSALERA 531


>gi|205360811|ref|ZP_02686636.2| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|205346897|gb|EDZ33528.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
          Length = 640

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/468 (27%), Positives = 197/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 182 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 228

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 229 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDV 277

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 278 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDETSVAQPVDEQTARRSKPAPA 337

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  +
Sbjct: 338 VRAAYDNELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAE 397

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 398 L--STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 455

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  
Sbjct: 456 LARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAH 515

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+ 
Sbjct: 516 NSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWND 574

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 575 ARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 622


>gi|301023047|ref|ZP_07186856.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|300397253|gb|EFJ80791.1| conserved hypothetical protein [Escherichia coli MS 69-1]
          Length = 615

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 131/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++  D+ 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKDQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|197266013|ref|ZP_03166087.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA23]
 gi|197244268|gb|EDY26888.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA23]
          Length = 614

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/466 (27%), Positives = 197/466 (42%), Gaps = 80/466 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD----------------------------------------PSKGLS 131
             LRE L  +G LD                                        P+  + 
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSSVVSPSAVVDETSVAHDEPTARRSKPAPAVR 313

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
            A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  +  
Sbjct: 314 AAYDNELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL- 372

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ 
Sbjct: 373 -STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLA 431

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINA 307
           +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N+
Sbjct: 432 RKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNS 491

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   
Sbjct: 492 LGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDAR 550

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 ISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 596


>gi|283784752|ref|YP_003364617.1| hypothetical protein ROD_09941 [Citrobacter rodentium ICC168]
 gi|282948206|emb|CBG87773.1| putative exported protein [Citrobacter rodentium ICC168]
          Length = 624

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/455 (28%), Positives = 199/455 (43%), Gaps = 69/455 (15%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N+ LY    Y +    LS             +IN+   ++ N   
Sbjct: 179 MMGYLQFVAGIPVNGNRWLYSNKPYKLATPALS-------------VINQWQLALDNGEL 225

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSV 111
             F+A +                A+  +++     +     WP+L     L  G  S  V
Sbjct: 226 PRFIASLAPA---------HPQYARMHQSLLAL--VGDSRPWPQLRSAATLRPGQWSSDV 274

Query: 112 QRLRERLIISGDLDPSKGL-----------------------------SVAFDAYVESAV 142
             LRE L  SG LD    +                               A+D  + +AV
Sbjct: 275 PALREILKRSGMLDGGPKIALPGDDAQNVVVSPSAPVKEKQAAVVSNKPAAYDRELVAAV 334

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           K FQ   GL   G +  +T   MNV    R   L +N+ R++ L  +      ++VNIPA
Sbjct: 335 KQFQAWQGLGADGAIGPATRYWMNVTPAQRAGGLALNIQRLRLLPAEL--STGIMVNIPA 392

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  L  D
Sbjct: 393 YSLVYYQNGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKLWND 452

Query: 263 PQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSR 318
           P YL+ +   ++     +  +   +VDW++  P N  FR  Q PG  N++   K    S 
Sbjct: 453 PGYLERHGYTVMRGWNSKDAIDPWQVDWSTITPSNLPFRFQQAPGAHNSLGRYKFNMPSS 512

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +  Y+HDTP   LF+   R  +SGCVRV    +L   LL+D   W+   I + +K   T 
Sbjct: 513 DAIYLHDTPNHTLFSKDARALSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGNTR 571

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 572 YVTIRQTIPVNLYYLTAFVGADGRTQYRTDIYNYD 606


>gi|91210027|ref|YP_540013.1| hypothetical protein UTI89_C0997 [Escherichia coli UTI89]
 gi|117623143|ref|YP_852056.1| hypothetical protein APECO1_37 [Escherichia coli APEC O1]
 gi|218557830|ref|YP_002390743.1| hypothetical protein ECS88_0953 [Escherichia coli S88]
 gi|237707087|ref|ZP_04537568.1| YcbB [Escherichia sp. 3_2_53FAA]
 gi|91071601|gb|ABE06482.1| hypothetical protein YcbB [Escherichia coli UTI89]
 gi|115512267|gb|ABJ00342.1| YcbB [Escherichia coli APEC O1]
 gi|218364599|emb|CAR02285.1| putative exported enzyme [Escherichia coli S88]
 gi|226898297|gb|EEH84556.1| YcbB [Escherichia sp. 3_2_53FAA]
 gi|294493685|gb|ADE92441.1| putative peptidoglycan binding domain protein [Escherichia coli
           IHE3034]
 gi|307627648|gb|ADN71952.1| hypothetical protein UM146_12925 [Escherichia coli UM146]
 gi|315287548|gb|EFU46954.1| conserved hypothetical protein [Escherichia coli MS 110-3]
 gi|323953367|gb|EGB49233.1| ykud domain-containing protein [Escherichia coli H252]
 gi|323958230|gb|EGB53939.1| ykud domain-containing protein [Escherichia coli H263]
          Length = 615

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDQGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKLMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|56413956|ref|YP_151031.1| hypothetical protein SPA1803 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362879|ref|YP_002142516.1| hypothetical protein SSPA1676 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128213|gb|AAV77719.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094356|emb|CAR59868.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 615

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/467 (27%), Positives = 196/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                          S   
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAAIVETSVAQPVDEPTARRSKSAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWTTITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|269139502|ref|YP_003296203.1| hypothetical protein ETAE_2157 [Edwardsiella tarda EIB202]
 gi|267985163|gb|ACY84992.1| hypothetical protein ETAE_2157 [Edwardsiella tarda EIB202]
 gi|304559391|gb|ADM42055.1| L,D-transpeptidase YcbB [Edwardsiella tarda FL6-60]
          Length = 544

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 118/431 (27%), Positives = 188/431 (43%), Gaps = 42/431 (9%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         +  LY    Y +      LV+                 ++     
Sbjct: 125 MMGYLQYVAGVAANGDAWLYGNKSYTLAAPPAGLVDN-------------WQRALRQGTL 171

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
             F+  +           S         A+     +     WP++P  P L  G+SS ++
Sbjct: 172 TVFIRSLAP---------SNPQYPAMRTALETL--LADTQPWPQMPSGPTLRSGDSSPAI 220

Query: 112 QRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
             LR  L+ SG L     G    +   + +AVK FQ   GL P G++   T   +NV   
Sbjct: 221 ATLRAILLRSGALSTAEAGDGDVYTPALVAAVKRFQSGQGLTPDGVIGPRTYAWLNVTPS 280

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
           +R   L +N+ R++ L         ++VNIP  S+    +GK  L S VIVGR  R+TP+
Sbjct: 281 MRAALLALNIQRLRLLPASV--HTGIMVNIPNYSMTYYRDGKDVLSSRVIVGRPARKTPL 338

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVD 287
           ++S +N ++ NP W +P  ++++D++    +DP Y + +   ++       + +    +D
Sbjct: 339 MNSELNNVVVNPPWNVPTKLVREDIVPKAMRDPGYFERHGYTLLSGWSGDVQVINPYMID 398

Query: 288 WNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           WNS    NF +  RQ PG  N++   K    S++  Y+HDTP   LFN  +R  +SGCVR
Sbjct: 399 WNSVSARNFPYRVRQAPGASNSLGRFKFNMPSQDAIYLHDTPNHALFNQDIRALSSGCVR 458

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           +     L   LL D   WS   +   ++   T  V +   +PV   Y +AW       QF
Sbjct: 459 INKASTLADMLLADA-GWSPERVASALQAGNTQYVPIRQRIPVRLYYQTAWVSDGGEPQF 517

Query: 406 RDDIYGLDNVH 416
           R DIY  D + 
Sbjct: 518 RTDIYNYDQLA 528


>gi|168822072|ref|ZP_02834072.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205341461|gb|EDZ28225.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|320085238|emb|CBY95023.1| Uncharacterized protein ycbB [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 615

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/467 (27%), Positives = 196/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                          S   
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAAVVETSVAQPVDEPTARRSKSAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|77463328|ref|YP_352832.1| hypothetical protein RSP_2774 [Rhodobacter sphaeroides 2.4.1]
 gi|126462184|ref|YP_001043298.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|77387746|gb|ABA78931.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
 gi|126103848|gb|ABN76526.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 546

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 121/408 (29%), Positives = 194/408 (47%), Gaps = 13/408 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIAQ 77
           +L     L    +    +D  I  +   +        F A     +DS  P       A+
Sbjct: 134 LLAWAHDLHGGALEPGKVDPGIKRAVKRLDPRSVLTAFEANPVHFLDSLAP--RGPDYAR 191

Query: 78  TEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             +A    +  ++ GGW   +P   L  G +      LR+RL+  G L  S   S  +DA
Sbjct: 192 LMRARLDLEATVAAGGWGAAVPAGKLKPGATGPGFLALRDRLMAMGYLGRSTAAS--YDA 249

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            V +AV+ FQ  HGL P G+    T+ A+NV  + R++ + V L R +  L    G R++
Sbjct: 250 EVAAAVRSFQTDHGLSPDGVAGEGTIAALNVAPEARLKSILVALERER-WLSIDRGERHI 308

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            VN+   S   ++NGKV   +  ++G+   D++TP     +  ++ NP W +PRSI  K+
Sbjct: 309 WVNLADFSTRLIDNGKVTFETRSVIGKDSPDQRTPEFSDEMEYMVINPSWHVPRSITTKE 368

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            + LL+++P      ++ +ID +G+EV    V++N+    NF F  RQ P   NA+   K
Sbjct: 369 YLPLLQRNPN--AAGHLKLIDSRGREVSRGAVNFNAYNARNFPFSMRQPPSDGNALGLVK 426

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F ++ N Y+HDTP   LF+  VR  + GC+R+    D    LL           +  +
Sbjct: 427 FMFPNQWNIYLHDTPSKSLFDREVRAFSHGCIRLGRPFDFAYALLAAQTDDPEGLFQSHL 486

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            + + + V+L   VPVH VY +AW+     + +RDDIYG D V    +
Sbjct: 487 SSGRESVVRLEKPVPVHLVYFTAWAGPTGQMNYRDDIYGRDGVIFDAL 534


>gi|309795089|ref|ZP_07689509.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|308121393|gb|EFO58655.1| conserved hypothetical protein [Escherichia coli MS 145-7]
          Length = 615

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|300937730|ref|ZP_07152531.1| conserved hypothetical protein [Escherichia coli MS 21-1]
 gi|300457237|gb|EFK20730.1| conserved hypothetical protein [Escherichia coli MS 21-1]
          Length = 615

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNNREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|16128892|ref|NP_415445.1| murein L,D-transpeptidase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89107775|ref|AP_001555.1| predicted carboxypeptidase [Escherichia coli str. K-12 substr.
           W3110]
 gi|170080583|ref|YP_001729903.1| carboxypeptidase [Escherichia coli str. K-12 substr. DH10B]
 gi|238900183|ref|YP_002925979.1| putative carboxypeptidase [Escherichia coli BW2952]
 gi|2506630|sp|P22525|YCBB_ECOLI RecName: Full=Probable L,D-transpeptidase YcbB
 gi|1787155|gb|AAC74011.1| murein L,D-transpeptidase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|4062492|dbj|BAA35671.1| predicted carboxypeptidase [Escherichia coli str. K12 substr.
           W3110]
 gi|169888418|gb|ACB02125.1| predicted carboxypeptidase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238862186|gb|ACR64184.1| predicted carboxypeptidase [Escherichia coli BW2952]
 gi|260449929|gb|ACX40351.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1]
 gi|315135573|dbj|BAJ42732.1| hypothetical protein ECDH1ME8569_0876 [Escherichia coli DH1]
          Length = 615

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LCDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|281178056|dbj|BAI54386.1| putative amidase [Escherichia coli SE15]
          Length = 615

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKLMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|311280161|ref|YP_003942392.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
 gi|308749356|gb|ADO49108.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
          Length = 602

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 132/467 (28%), Positives = 205/467 (43%), Gaps = 66/467 (14%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        + N+ LY    Y        +   P+       +IN+   ++ N   
Sbjct: 161 MLGYLHFISNIALQGNRWLYSDKPY-------GMSTPPL------SVINQWQLALDNGSL 207

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSV 111
             F+A +                A   +A+     +     WP++     L+ G  S  V
Sbjct: 208 PRFIAGLAPQ---------HPQYAAMHQALLAL--VTDSRPWPQMASSGKLNPGQWSKDV 256

Query: 112 QRLRERLIISGDLD-------------------------PSKGLSVAFDAYVESAVKLFQ 146
             LRE L  +G LD                          +      +D  +  AVK FQ
Sbjct: 257 PALREILQRTGMLDNTPNIALPGDSGAVSPSAAPVKKVKAASSAPAVYDRQLVEAVKRFQ 316

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
              GL   G++  ST +A+NV    R   L +N+ R++ LL  K+    ++VNIPA SL 
Sbjct: 317 ASQGLGADGVIGQSTRDALNVSSAQRAGVLALNIQRLR-LLPGKLS-TGIMVNIPAYSLV 374

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
             +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL
Sbjct: 375 YYQNGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYL 434

Query: 267 KDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTY 322
           + +   ++     +  +    VDW++  P N  FR  Q PG  N++   K    S    Y
Sbjct: 435 ERHGYTVLRGWNSKETINPYHVDWSTITPSNLPFRFQQAPGAKNSLGRYKFNMPSSEAIY 494

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I + +K   T  V +
Sbjct: 495 LHDTPNHNLFQKDTRALSSGCVRVNKAPELASMLLQDA-GWNDTRISDALKQGDTRYVNI 553

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH-VGIIPLPEDHPI 428
              +PV+  Y++A+   D   Q+R DIY  D +   G   LP+   +
Sbjct: 554 RQNIPVNLYYLTAFVGPDGRTQYRTDIYNYDLMARSGAQILPKAEQL 600


>gi|291281926|ref|YP_003498744.1| putative peptidoglycan binding domain protein [Escherichia coli
           O55:H7 str. CB9615]
 gi|209774748|gb|ACI85686.1| putative amidase [Escherichia coli]
 gi|209774754|gb|ACI85689.1| putative amidase [Escherichia coli]
 gi|290761799|gb|ADD55760.1| Putative peptidoglycan binding domain protein [Escherichia coli
           O55:H7 str. CB9615]
 gi|320642918|gb|EFX12119.1| murein L,D-transpeptidase [Escherichia coli O157:H- str. 493-89]
 gi|320648375|gb|EFX17030.1| murein L,D-transpeptidase [Escherichia coli O157:H- str. H 2687]
 gi|320653691|gb|EFX21765.1| murein L,D-transpeptidase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320659836|gb|EFX27392.1| murein L,D-transpeptidase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664305|gb|EFX31456.1| murein L,D-transpeptidase [Escherichia coli O157:H7 str. LSU-61]
          Length = 615

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQQALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|78189746|ref|YP_380084.1| hypothetical protein Cag_1790 [Chlorobium chlorochromatii CaD3]
 gi|78171945|gb|ABB29041.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
          Length = 563

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 118/398 (29%), Positives = 198/398 (49%), Gaps = 7/398 (1%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
           P+         +       ++     L R       +  +         +K +A Y++I 
Sbjct: 167 PVRFEPTWNFSSPPNLFHFDELLARTLQRTSPSEVLNGLLPRDPGYDVLKKELARYREIA 226

Query: 90  SRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQ 146
             GGW  +P   L   G+    V  LR+RL  SGD+  S     +  ++  V  AVK FQ
Sbjct: 227 KNGGWSAIPAGTLLQEGSRDARVPLLRQRLAASGDISSSAVADTTTLYNPDVTKAVKRFQ 286

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
            +HGL   G+V ++TL A+NV  D RI QL+VNL R + LL   +    V+VNIPA +L 
Sbjct: 287 QQHGLWSDGVVGATTLRAINVSADERIGQLRVNLERCRWLL-HDISPTSVIVNIPAYTLH 345

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
             E G     + VIVG+  R TP+  + +  ++ NP WV+P +++ KD++  + +DP YL
Sbjct: 346 YFEQGDRRWSTRVIVGQPKRPTPVFRADMQLLILNPRWVVPSTVLAKDVLPAVIKDPAYL 405

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMH 324
           +   + ++DE G  +    + W+S       +R  Q  G   A+   K    +R   Y+H
Sbjct: 406 RKKKLRVVDENGTIIDPATIKWSSYSASTLPYRLQQKSGDDGALGRIKFLMPNRYTIYLH 465

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP+  LF    R  +SGC+RV++  +L   +L+ +   SR  +E  +K+  T+ ++L  
Sbjct: 466 DTPDKALFQKTQRAFSSGCIRVQHPEELARLVLRHSNRESRPSLESRIKSGATSTIRLPQ 525

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           ++PV+ +Y++A    ++  +FR+DIY  D   +  +  
Sbjct: 526 QIPVYLIYLTALP-CNNKAEFREDIYHRDPQILKALDA 562


>gi|157160446|ref|YP_001457764.1| hypothetical protein EcHS_A1032 [Escherichia coli HS]
 gi|170020673|ref|YP_001725627.1| hypothetical protein EcolC_2671 [Escherichia coli ATCC 8739]
 gi|188494298|ref|ZP_03001568.1| putative peptidoglycan binding domain [Escherichia coli 53638]
 gi|194438718|ref|ZP_03070805.1| putative peptidoglycan binding domain protein [Escherichia coli
           101-1]
 gi|253774046|ref|YP_003036877.1| hypothetical protein ECBD_2670 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161039|ref|YP_003044147.1| hypothetical protein ECB_00929 [Escherichia coli B str. REL606]
 gi|256023374|ref|ZP_05437239.1| hypothetical protein E4_08369 [Escherichia sp. 4_1_40B]
 gi|297521034|ref|ZP_06939420.1| hypothetical protein EcolOP_25597 [Escherichia coli OP50]
 gi|300929620|ref|ZP_07145082.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300949712|ref|ZP_07163691.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300955427|ref|ZP_07167801.1| hypothetical protein HMPREF9547_01312 [Escherichia coli MS 175-1]
 gi|301022419|ref|ZP_07186302.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|301643445|ref|ZP_07243493.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|307137554|ref|ZP_07496910.1| hypothetical protein EcolH7_05406 [Escherichia coli H736]
 gi|331641451|ref|ZP_08342586.1| putative amidase [Escherichia coli H736]
 gi|157066126|gb|ABV05381.1| putative peptidoglycan binding domain [Escherichia coli HS]
 gi|169755601|gb|ACA78300.1| Peptidoglycan-binding domain 1 protein [Escherichia coli ATCC 8739]
 gi|188489497|gb|EDU64600.1| putative peptidoglycan binding domain [Escherichia coli 53638]
 gi|194422350|gb|EDX38350.1| putative peptidoglycan binding domain protein [Escherichia coli
           101-1]
 gi|242376740|emb|CAQ31453.1| L,D-transpeptidase YcbB [Escherichia coli BL21(DE3)]
 gi|253325090|gb|ACT29692.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972940|gb|ACT38611.1| predicted carboxypeptidase [Escherichia coli B str. REL606]
 gi|253977154|gb|ACT42824.1| predicted carboxypeptidase [Escherichia coli BL21(DE3)]
 gi|299881260|gb|EFI89471.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|300317650|gb|EFJ67434.1| hypothetical protein HMPREF9547_01312 [Escherichia coli MS 175-1]
 gi|300450893|gb|EFK14513.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300462457|gb|EFK25950.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|301078159|gb|EFK92965.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|315619119|gb|EFU99699.1| putative peptidoglycan binding domain protein [Escherichia coli
           3431]
 gi|323938031|gb|EGB34293.1| ykud domain-containing protein [Escherichia coli E1520]
 gi|323942841|gb|EGB39006.1| ykud domain-containing protein [Escherichia coli E482]
 gi|323962917|gb|EGB58491.1| ykud domain-containing protein [Escherichia coli H489]
 gi|331038249|gb|EGI10469.1| putative amidase [Escherichia coli H736]
 gi|332342367|gb|AEE55701.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 615

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LCDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|205352202|ref|YP_002226003.1| hypothetical protein SG0937 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856386|ref|YP_002243037.1| hypothetical protein SEN0899 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|205271983|emb|CAR36827.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206708189|emb|CAR32482.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326627246|gb|EGE33589.1| putative peptidoglycan binding domain-containing protein
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 616

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/468 (27%), Positives = 197/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDETSVAQPVDEQTARRSKPAPA 313

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  +
Sbjct: 314 VRAAYDNELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAE 373

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 374 L--STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 431

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  
Sbjct: 432 LARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWTTITPSNLPFRFQQAPGAH 491

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+ 
Sbjct: 492 NSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWND 550

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 ARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 598


>gi|331662339|ref|ZP_08363262.1| putative amidase [Escherichia coli TA143]
 gi|331060761|gb|EGI32725.1| putative amidase [Escherichia coli TA143]
          Length = 615

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|168237100|ref|ZP_02662158.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194734245|ref|YP_002114048.1| hypothetical protein SeSA_A1110 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194709747|gb|ACF88968.1| YcbB [Salmonella enterica subsp. enterica serovar Schwarzengrund
           str. CVM19633]
 gi|197289807|gb|EDY29168.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
          Length = 615

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/467 (27%), Positives = 196/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                          S   
Sbjct: 254 PALREILQRTGTLDGGPKIALPGDNTADSAVVSPSAAVVETSVAQPVDEQTARRSKSAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|194337477|ref|YP_002019271.1| Peptidoglycan-binding domain 1 protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309954|gb|ACF44654.1| Peptidoglycan-binding domain 1 protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 549

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/416 (31%), Positives = 206/416 (49%), Gaps = 9/416 (2%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYH---SIVNDRFDNFLARVDMGIDSDIPIISKET 74
            +L + + L    +    LD   N       SIV ++  + +A   +        +    
Sbjct: 128 SLLSLAVHLRYGRVDPETLDTHWNSRQTRNGSIVENKLHHAIASGHIADALKELRLQHPK 187

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDP-SKGLSV 132
             Q  K +  Y+ I   GGWP L   P L  G     V  LR+RL +SGD+   +   S 
Sbjct: 188 YEQLRKGLVRYRTIARAGGWPVLAEGPKLQEGARGKRVMLLRQRLRVSGDIAVLNTDTST 247

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            ++  V  AVK FQ R+G+   G+V ++TL  MN+PV+ RI ++++NL R +  L + + 
Sbjct: 248 VYNREVVEAVKHFQKRNGMVADGVVGATTLRVMNIPVERRIDEIRLNLERYRWFL-RDLE 306

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              ++VNIP  +L+ +ENG+    + VI G+  R+TP+  + +  ++ NP WVIP +I+ 
Sbjct: 307 PTAIMVNIPRFTLQYIENGQDKWETRVITGKPPRETPLFKADMQYVILNPRWVIPPTILA 366

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMAS 310
           KD +  LR+   YL    + +ID  G  +    V+W+     NF +R  Q  G   A+  
Sbjct: 367 KDALPALRKSNSYLNRKRLTIIDRNGAVIDPVSVNWSQYSGGNFPYRLQQSSGDHGALGR 426

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K    +R   Y+HDTP   LF    R  +SGCVRV N +DL   +L+D+  WS+  I  
Sbjct: 427 IKFLLPNRYIVYLHDTPNKELFAASKRLFSSGCVRVENPVDLATLVLQDSVRWSKVKILS 486

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
            +K+ KT  V L   +PV+ +Y++     D  + FRDD+Y  D   +  +  P   
Sbjct: 487 AIKSGKTKTVLLPKRIPVYLLYLTVTPEGD-ELFFRDDVYNRDERLLKALNKPLPQ 541


>gi|331672461|ref|ZP_08373251.1| putative amidase [Escherichia coli TA280]
 gi|284920776|emb|CBG33839.1| putative exported protein [Escherichia coli 042]
 gi|331070367|gb|EGI41732.1| putative amidase [Escherichia coli TA280]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|170769178|ref|ZP_02903631.1| putative peptidoglycan binding domain [Escherichia albertii
           TW07627]
 gi|170121830|gb|EDS90761.1| putative peptidoglycan binding domain [Escherichia albertii
           TW07627]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 128/468 (27%), Positives = 203/468 (43%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++ N + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQVALDNGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDNKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G L+                                          P+  
Sbjct: 253 PALREILQRTGMLEGGPKIALPGDDTQPDGAVSPSAAAVETAGTQPINRQTTAHSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+++ + +AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYNSELVNAVKRFQAWQGLGADGTIGPATRDWLNVTPAQRAGVLALNIQRLRLLPAE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++     +  +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSKEAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASELANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|16759864|ref|NP_455481.1| hypothetical protein STY0997 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142363|ref|NP_805705.1| hypothetical protein t1939 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213424610|ref|ZP_03357393.1| hypothetical protein SentesTyphi_02366 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213650528|ref|ZP_03380581.1| hypothetical protein SentesTy_26793 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|25367958|pir||AI0615 probable exported protein STY0997 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16502157|emb|CAD05395.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137993|gb|AAO69554.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 126/467 (26%), Positives = 195/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                              
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTSDSAVVSPSAVVDETSVAQPVDEPTARRSKPAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|320202321|gb|EFW76892.1| L,D-transpeptidase YcbB [Escherichia coli EC4100B]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|82544667|ref|YP_408614.1| hypothetical protein SBO_2216 [Shigella boydii Sb227]
 gi|191166981|ref|ZP_03028804.1| putative peptidoglycan binding domain [Escherichia coli B7A]
 gi|193064628|ref|ZP_03045707.1| putative peptidoglycan binding domain [Escherichia coli E22]
 gi|193070734|ref|ZP_03051669.1| putative peptidoglycan binding domain [Escherichia coli E110019]
 gi|194428336|ref|ZP_03060877.1| putative peptidoglycan binding domain protein [Escherichia coli
           B171]
 gi|209918175|ref|YP_002292259.1| hypothetical protein ECSE_0984 [Escherichia coli SE11]
 gi|218553512|ref|YP_002386425.1| hypothetical protein ECIAI1_0966 [Escherichia coli IAI1]
 gi|218694399|ref|YP_002402066.1| hypothetical protein EC55989_0971 [Escherichia coli 55989]
 gi|260843174|ref|YP_003220952.1| putative carboxypeptidase [Escherichia coli O103:H2 str. 12009]
 gi|260854216|ref|YP_003228107.1| putative carboxypeptidase [Escherichia coli O26:H11 str. 11368]
 gi|293433222|ref|ZP_06661650.1| hypothetical protein ECCG_01347 [Escherichia coli B088]
 gi|300816970|ref|ZP_07097189.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300823665|ref|ZP_07103792.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300902916|ref|ZP_07120861.1| hypothetical protein HMPREF9536_01061 [Escherichia coli MS 84-1]
 gi|300921037|ref|ZP_07137424.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|301302465|ref|ZP_07208596.1| hypothetical protein HMPREF9347_01042 [Escherichia coli MS 124-1]
 gi|307311688|ref|ZP_07591328.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|331667303|ref|ZP_08368168.1| putative amidase [Escherichia coli TA271]
 gi|331676713|ref|ZP_08377409.1| putative amidase [Escherichia coli H591]
 gi|81246078|gb|ABB66786.1| putative amidase [Shigella boydii Sb227]
 gi|190902975|gb|EDV62701.1| putative peptidoglycan binding domain [Escherichia coli B7A]
 gi|192927685|gb|EDV82300.1| putative peptidoglycan binding domain [Escherichia coli E22]
 gi|192955927|gb|EDV86395.1| putative peptidoglycan binding domain [Escherichia coli E110019]
 gi|194413551|gb|EDX29832.1| putative peptidoglycan binding domain protein [Escherichia coli
           B171]
 gi|209911434|dbj|BAG76508.1| putative amidase [Escherichia coli SE11]
 gi|218351131|emb|CAU96835.1| putative exported enzyme [Escherichia coli 55989]
 gi|218360280|emb|CAQ97830.1| putative exported enzyme [Escherichia coli IAI1]
 gi|257752865|dbj|BAI24367.1| predicted carboxypeptidase [Escherichia coli O26:H11 str. 11368]
 gi|257758321|dbj|BAI29818.1| predicted carboxypeptidase [Escherichia coli O103:H2 str. 12009]
 gi|291324041|gb|EFE63463.1| hypothetical protein ECCG_01347 [Escherichia coli B088]
 gi|300405058|gb|EFJ88596.1| hypothetical protein HMPREF9536_01061 [Escherichia coli MS 84-1]
 gi|300412028|gb|EFJ95338.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300523865|gb|EFK44934.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300530322|gb|EFK51384.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300842304|gb|EFK70064.1| hypothetical protein HMPREF9347_01042 [Escherichia coli MS 124-1]
 gi|306908243|gb|EFN38742.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|315060210|gb|ADT74537.1| murein L,D-transpeptidase [Escherichia coli W]
 gi|315257966|gb|EFU37934.1| putative amidase [Escherichia coli MS 85-1]
 gi|320183824|gb|EFW58657.1| L,D-transpeptidase YcbB [Shigella flexneri CDC 796-83]
 gi|323157188|gb|EFZ43311.1| putative peptidoglycan binding domain protein [Escherichia coli
           EPECa14]
 gi|323159552|gb|EFZ45532.1| putative peptidoglycan binding domain protein [Escherichia coli
           E128010]
 gi|323379230|gb|ADX51498.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11]
 gi|323947286|gb|EGB43294.1| ykud domain-containing protein [Escherichia coli H120]
 gi|324117210|gb|EGC11118.1| ykud domain-containing protein [Escherichia coli E1167]
 gi|331065659|gb|EGI37552.1| putative amidase [Escherichia coli TA271]
 gi|331075402|gb|EGI46700.1| putative amidase [Escherichia coli H591]
 gi|332093526|gb|EGI98584.1| putative peptidoglycan binding domain protein [Shigella boydii
           3594-74]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|168233416|ref|ZP_02658474.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|194468577|ref|ZP_03074561.1| YcbB [Salmonella enterica subsp. enterica serovar Kentucky str.
           CVM29188]
 gi|194454941|gb|EDX43780.1| YcbB [Salmonella enterica subsp. enterica serovar Kentucky str.
           CVM29188]
 gi|205332469|gb|EDZ19233.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 126/467 (26%), Positives = 195/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                              
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTSDSAVVSPSAVVDETSVAQPVDEQTARSSKPAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|16764355|ref|NP_459970.1| hypothetical protein STM0995 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167994946|ref|ZP_02576036.1| YcbB [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|16419508|gb|AAL19929.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205327278|gb|EDZ14042.1| YcbB [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|267992734|gb|ACY87619.1| hypothetical protein STM14_1125 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157538|emb|CBW17028.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911981|dbj|BAJ35955.1| hypothetical protein STMDT12_C10120 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223319|gb|EFX48388.1| L,D-transpeptidase YcbB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323129260|gb|ADX16690.1| putative L,D-transpeptidase YcbB [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332987886|gb|AEF06869.1| hypothetical protein STMUK_0961 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 613

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 126/465 (27%), Positives = 195/465 (41%), Gaps = 79/465 (16%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD---------------------------------------PSKGLSV 132
             LRE L  +G LD                                            + 
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDETSVAHDEPTARRSKPAPAAR 313

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  +   
Sbjct: 314 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL-- 371

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +
Sbjct: 372 STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLAR 431

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAM 308
           KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N++
Sbjct: 432 KDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSL 491

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I
Sbjct: 492 GRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARI 550

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 SGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 595


>gi|323973200|gb|EGB68392.1| ykud domain-containing protein [Escherichia coli TA007]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQMTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|157157051|ref|YP_001462144.1| hypothetical protein EcE24377A_1024 [Escherichia coli E24377A]
 gi|256020947|ref|ZP_05434812.1| hypothetical protein ShiD9_18662 [Shigella sp. D9]
 gi|301326639|ref|ZP_07219969.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|332282170|ref|ZP_08394583.1| conserved hypothetical protein [Shigella sp. D9]
 gi|157079081|gb|ABV18789.1| putative peptidoglycan binding domain [Escherichia coli E24377A]
 gi|300846684|gb|EFK74444.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|332104522|gb|EGJ07868.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQMTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|260867097|ref|YP_003233499.1| putative carboxypeptidase [Escherichia coli O111:H- str. 11128]
 gi|257763453|dbj|BAI34948.1| predicted carboxypeptidase [Escherichia coli O111:H- str. 11128]
 gi|323175452|gb|EFZ61047.1| putative peptidoglycan binding domain protein [Escherichia coli
           1180]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYKNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|156934583|ref|YP_001438499.1| hypothetical protein ESA_02417 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532837|gb|ABU77663.1| hypothetical protein ESA_02417 [Cronobacter sakazakii ATCC BAA-894]
          Length = 664

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 129/472 (27%), Positives = 203/472 (43%), Gaps = 71/472 (15%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           MVGYL        + N+ LY    Y      L              ++N+   ++ N   
Sbjct: 218 MVGYLHFISGIPSQGNRWLYSEKPYKPEMPAL-------------NVLNQWQVALDNGSV 264

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+  +                A    ++   Q +     WP++  +  L  G  S  +
Sbjct: 265 PAFVRSLAPA---------HPQYAAMHASL--LQLVADTRPWPQMTGKEKLRPGQWSSDI 313

Query: 112 QRLRERLIISGDLDPSKGLS-----------------------------VAFDAYVESAV 142
             L+E L  +G LD    ++                               +D  + +AV
Sbjct: 314 PALKEILQRTGMLDGGPDIALPGDNNGVVSPSAAPQTASQTRSTPKPTRAVYDKDLVAAV 373

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           K FQ   GL   G++  ST + +NV    R   L +N+ R++ LL  K+    ++VNIP 
Sbjct: 374 KRFQKWQGLGADGVIGESTRDWLNVTPAQRAALLALNIQRLR-LLPGKLS-TGIMVNIPE 431

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  D
Sbjct: 432 YSLVYYQNGNQVLASRVIVGRPDRKTPLMSSALNNVVVNPPWNVPPTLARKDILPKVWND 491

Query: 263 PQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYS 317
           P YL+ +   +++  G     V    VDW +  P N  FR  Q PG  N++   K    S
Sbjct: 492 PGYLESHGYTVLNGWGSNADVVDPWMVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPS 551

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
            +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I + +K   T
Sbjct: 552 SDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDSRISQTLKEGNT 610

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
             V +   +PV+  Y++A+  +D   Q+R DIY  D     G   LP+   +
Sbjct: 611 RYVNIPQTIPVNLYYLTAFIGEDGRPQYRTDIYNYDHTARSGAQILPKVEQL 662


>gi|294636885|ref|ZP_06715215.1| cell wall degradation protein [Edwardsiella tarda ATCC 23685]
 gi|291089915|gb|EFE22476.1| cell wall degradation protein [Edwardsiella tarda ATCC 23685]
          Length = 550

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 122/431 (28%), Positives = 187/431 (43%), Gaps = 42/431 (9%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           ++GYL+            LY    Y +      LV+                 ++     
Sbjct: 131 LLGYLQYVAGVGANGESWLYGGKRYTLATPPTGLVDN-------------WQRALHQGTL 177

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
             F+  +           S         A+A    +     WP+LP  P +  G+SS ++
Sbjct: 178 TVFIRSLAP---------SSPQYPAMRAALATL--LGESQPWPKLPSGPTIRPGDSSPAL 226

Query: 112 QRLRERLIISGDLDP-SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
             LRE L  SG L          +   + +AVK FQ   GL P G++   T   +NV   
Sbjct: 227 PILREILRRSGVLSANQADEGEVYTPALVAAVKRFQRDQGLTPDGVIGPRTYAWLNVTPQ 286

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
           LR   L +N+ R++ L         ++VNIP  SL    +GK  L S VIVGR  R+TP+
Sbjct: 287 LRAALLALNIQRLRILPAAM--QTGIMVNIPNYSLIYYRDGKDVLASRVIVGRPSRKTPL 344

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVD 287
           ++S +N ++ NP W +P  ++++D++    +DP Y   +   ++       + +    +D
Sbjct: 345 MNSELNNVVVNPPWNVPTKLVREDIVPKAMRDPGYFDRHGYTLLSGWSSDAQVINPYMID 404

Query: 288 WNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           WNS    NF +  RQ PG  N++   K    S++  Y+HDTP   LFN  +R  +SGCVR
Sbjct: 405 WNSVSARNFPYRVRQAPGASNSLGRFKFNMPSQDAIYLHDTPNHALFNQDIRALSSGCVR 464

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V     L   LL D   WS   +   ++   T  V +   +PV   Y +AW   D   QF
Sbjct: 465 VNKASTLADMLLADA-GWSDQRVAAALQAGNTQYVPIRQRIPVRLYYQTAWVDGDGAPQF 523

Query: 406 RDDIYGLDNVH 416
           R DIY  D + 
Sbjct: 524 RTDIYNYDQLA 534


>gi|204929796|ref|ZP_03220817.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|204320790|gb|EDZ05991.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|322616425|gb|EFY13334.1| hypothetical protein SEEM315_12488 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619675|gb|EFY16550.1| hypothetical protein SEEM971_17482 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622629|gb|EFY19474.1| hypothetical protein SEEM973_13475 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629778|gb|EFY26553.1| hypothetical protein SEEM974_05176 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632500|gb|EFY29246.1| hypothetical protein SEEM201_14855 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637005|gb|EFY33708.1| hypothetical protein SEEM202_02080 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641456|gb|EFY38094.1| hypothetical protein SEEM954_01508 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322646078|gb|EFY42594.1| hypothetical protein SEEM054_01025 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649619|gb|EFY46050.1| hypothetical protein SEEM675_16024 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654079|gb|EFY50402.1| hypothetical protein SEEM965_12727 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658611|gb|EFY54873.1| hypothetical protein SEEM19N_16592 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663468|gb|EFY59670.1| hypothetical protein SEEM801_11882 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670204|gb|EFY66344.1| hypothetical protein SEEM507_18659 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671440|gb|EFY67562.1| hypothetical protein SEEM877_09668 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676796|gb|EFY72863.1| hypothetical protein SEEM867_07816 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682720|gb|EFY78739.1| hypothetical protein SEEM180_06862 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686400|gb|EFY82382.1| hypothetical protein SEEM600_05845 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195923|gb|EFZ81090.1| hypothetical protein SEEM581_13131 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199789|gb|EFZ84878.1| hypothetical protein SEEM501_09363 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202782|gb|EFZ87818.1| hypothetical protein SEEM460_08299 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209053|gb|EFZ93990.1| hypothetical protein SEEM020_20065 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209978|gb|EFZ94885.1| hypothetical protein SEEM6152_04835 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217987|gb|EGA02702.1| hypothetical protein SEEM0077_06119 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219019|gb|EGA03526.1| hypothetical protein SEEM0047_21870 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226592|gb|EGA10797.1| hypothetical protein SEEM0055_10100 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229788|gb|EGA13911.1| hypothetical protein SEEM0052_13157 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233013|gb|EGA17109.1| hypothetical protein SEEM3312_03109 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240748|gb|EGA24790.1| hypothetical protein SEEM5258_12719 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243064|gb|EGA27085.1| hypothetical protein SEEM1156_20569 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323249773|gb|EGA33675.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252754|gb|EGA36592.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323259168|gb|EGA42812.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259991|gb|EGA43619.1| hypothetical protein SEEM8284_18068 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323268008|gb|EGA51487.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269856|gb|EGA53305.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/467 (27%), Positives = 196/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLDP-----------------------------------------SKGL 130
             LRE L  +G LD                                          S   
Sbjct: 254 PALREILQRTGMLDDGPKMALPGDNTADSAVVSPSAAVVETSVAQPVDEQTARRSKSAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|293414205|ref|ZP_06656854.1| hypothetical protein ECDG_00758 [Escherichia coli B185]
 gi|331651945|ref|ZP_08352964.1| putative amidase [Escherichia coli M718]
 gi|291434263|gb|EFF07236.1| hypothetical protein ECDG_00758 [Escherichia coli B185]
 gi|331050223|gb|EGI22281.1| putative amidase [Escherichia coli M718]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|170683737|ref|YP_001744245.1| hypothetical protein EcSMS35_2195 [Escherichia coli SMS-3-5]
 gi|170521455|gb|ACB19633.1| putative peptidoglycan binding domain [Escherichia coli SMS-3-5]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|324019066|gb|EGB88285.1| hypothetical protein HMPREF9542_02261 [Escherichia coli MS 117-3]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 131/468 (27%), Positives = 200/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ LL  
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLR-LLPT 371

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
           ++    ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 372 ELSSG-IMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|198244692|ref|YP_002214919.1| hypothetical protein SeD_A1060 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197939208|gb|ACH76541.1| YcbB [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326622672|gb|EGE29017.1| YcbB [Salmonella enterica subsp. enterica serovar Dublin str. 3246]
          Length = 616

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/468 (27%), Positives = 197/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDEPSVAQPVDEQTARRSKPAPA 313

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  +
Sbjct: 314 VRAAYDNELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAE 373

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 374 L--STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 431

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  
Sbjct: 432 LARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWTTITPSNLPFRFQQAPGAH 491

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+ 
Sbjct: 492 NSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWND 550

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 ARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 598


>gi|311695538|gb|ADP98411.1| peptidoglycan-binding domain 1 protein [marine bacterium HP15]
          Length = 550

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 133/417 (31%), Positives = 199/417 (47%), Gaps = 12/417 (2%)

Query: 15  FVYLILPMGLSLVEKPIHASVL-DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE 73
           F    L +   ++   ++   +  E         +     + L R D+    D    +  
Sbjct: 113 FSDAFLMLSSHMLVGKVNPQTVHAEWTANRRQRQMESVLKDALQRSDITGTLDSLRPADP 172

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKG--- 129
              +   A      +L +  W  L + P +  G+    +  +R RL + G+L  S     
Sbjct: 173 AYRKLMAARQDLTRLLGQP-WLPLALSPTIRPGDRDERLNEVRRRLSLLGELAESPATFS 231

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +DA +ESAV  FQ RHGL+  G++   TL A+NV    R+R +   L R +  L +
Sbjct: 232 DPRDYDAELESAVMRFQARHGLEADGLIGKDTLTALNVIPVERLRHIDATLERWR-WLPE 290

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +G  YVLVNI    L+ VENG   LR  VIVG+  RQTP+   RI  ++FNP W +PR+
Sbjct: 291 SLGDTYVLVNIAGFELKMVENGAEVLRKRVIVGQPFRQTPVFSDRIRYLVFNPTWTVPRT 350

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIF--RQDPGK 304
           ++ +D +  + +DP YL   NI +    G   + V   EVDW S    NF +   Q+PG 
Sbjct: 351 LMIQDQLPRILRDPNYLSRLNISVYRGWGADRERVDPLEVDWPSLNRNNFPYQLVQEPGP 410

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   K  F ++ + Y+HDTP   LF+   R  +SGC+RV    DL   LL   P WS
Sbjct: 411 QNALGQIKFMFPNQYDVYLHDTPGRGLFSRAERSFSSGCIRVEQPFDLAERLLASAPDWS 470

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           R  I+ VV   +   V L   VPVH  Y ++W   +  +QFR+D+Y  D   +  + 
Sbjct: 471 REKIDRVVSEAQPQTVVLPEPVPVHIQYWTSWVDNEGRLQFRNDLYNRDARLIDQLR 527


>gi|167553003|ref|ZP_02346753.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA29]
 gi|194442554|ref|YP_002040193.1| hypothetical protein SNSL254_A1028 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194401217|gb|ACF61439.1| YcbB [Salmonella enterica subsp. enterica serovar Newport str.
           SL254]
 gi|205322472|gb|EDZ10311.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA29]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/467 (27%), Positives = 196/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                          S   
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAAVVETSVAQPVDEPTARRSKSAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|74311483|ref|YP_309902.1| hypothetical protein SSON_0928 [Shigella sonnei Ss046]
 gi|73854960|gb|AAZ87667.1| putative amidase [Shigella sonnei Ss046]
          Length = 615

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|323185369|gb|EFZ70733.1| putative peptidoglycan binding domain protein [Escherichia coli
           1357]
          Length = 615

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  ++D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRASYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|218548441|ref|YP_002382232.1| hypothetical protein EFER_1069 [Escherichia fergusonii ATCC 35469]
 gi|218355982|emb|CAQ88598.1| putative exported enzyme [Escherichia fergusonii ATCC 35469]
 gi|324113744|gb|EGC07719.1| ykud domain-containing protein [Escherichia fergusonii B253]
 gi|325496863|gb|EGC94722.1| hypothetical protein ECD227_0960 [Escherichia fergusonii ECD227]
          Length = 615

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 124/468 (26%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++ N + 
Sbjct: 157 MMGYLHFTANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQVALDNGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
             F+A +                    +++     +     WP+L  +  L  G  S  V
Sbjct: 204 PAFVAGLAPK---------HPQYTAMHESLLTL--LADTKPWPQLTGKTTLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G L+                                           +  
Sbjct: 253 PALREILQRTGMLEGGPKIALPGDETPAEAVVSPSAVAVETSETKPLDKQTEPRKKAAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDKELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPAE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQDGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++     +  +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSKEAIDPWQVDWSTITASNLPFRFQQAPGAR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSTDAIYLHDTPNHNLFKRDTRALSSGCVRVNKASELANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQTIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|200389383|ref|ZP_03215994.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|199601828|gb|EDZ00374.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
          Length = 615

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 127/467 (27%), Positives = 196/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                          S   
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDETSVAQPVDEPTARRSKSAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|157146384|ref|YP_001453703.1| hypothetical protein CKO_02143 [Citrobacter koseri ATCC BAA-895]
 gi|157083589|gb|ABV13267.1| hypothetical protein CKO_02143 [Citrobacter koseri ATCC BAA-895]
          Length = 620

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 200/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++ N + 
Sbjct: 162 MMGYLHFIANIPVKGTRWLYSDKPYALATPPLS-------------VINQWQIALDNGQL 208

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSV 111
             F+A +                A    ++     +     WP+L     L  G  S  V
Sbjct: 209 TTFVASLAPQ---------HPQYAALHDSLKKL--VSDARPWPQLTSTATLRPGQWSNDV 257

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G L+                                          P+  
Sbjct: 258 PALREILQRTGMLEGGPKIALPGDDVAADVVVSPSAVAVEPAAVKPVARQSTQRSQPAPA 317

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G V  +T E +NV    R   L +N+ R++ LL  
Sbjct: 318 VRAAYDRELVDAVKRFQTWQGLGADGAVGPATREWLNVTPAQRAGVLALNIQRLR-LLPG 376

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
           ++    ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 377 ELS-TGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 435

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +  DP YL+ +   ++     +  +   +VDW++  P N  FR  Q PG  
Sbjct: 436 LARKDILPKVWNDPGYLERHGYTVMRGWNSKETINPWQVDWSTITPSNLPFRFQQAPGAH 495

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+ 
Sbjct: 496 NSLGRYKFNMPSSDAIYLHDTPNHNLFQKDTRALSSGCVRVNKASELANMLLQDA-GWND 554

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 555 TRISDALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRTQYRTDIYNYD 602


>gi|224582805|ref|YP_002636603.1| hypothetical protein SPC_0996 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224467332|gb|ACN45162.1| hypothetical protein SPC_0996 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 639

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 126/467 (26%), Positives = 195/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 182 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 228

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 229 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 277

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                          S   
Sbjct: 278 PALREILQCTGMLDGGPKIALPGDNTADSAVVSPSAAVVETSVAQPVDEPTARRSKSAPA 337

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 338 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 397

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 398 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 455

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 456 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 515

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 516 SLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 574

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+  DIY  D
Sbjct: 575 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYHTDIYNYD 621


>gi|218700556|ref|YP_002408185.1| hypothetical protein ECIAI39_2222 [Escherichia coli IAI39]
 gi|218370542|emb|CAR18349.1| putative exported enzyme [Escherichia coli IAI39]
          Length = 615

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNNREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTCYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|187731093|ref|YP_001880874.1| hypothetical protein SbBS512_E2393 [Shigella boydii CDC 3083-94]
 gi|187428085|gb|ACD07359.1| putative peptidoglycan binding domain [Shigella boydii CDC 3083-94]
          Length = 615

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 131/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L LG  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRLGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|306812622|ref|ZP_07446815.1| hypothetical protein ECNC101_11937 [Escherichia coli NC101]
 gi|305853385|gb|EFM53824.1| hypothetical protein ECNC101_11937 [Escherichia coli NC101]
          Length = 615

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPV 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNNREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|218704353|ref|YP_002411872.1| hypothetical protein ECUMN_1119 [Escherichia coli UMN026]
 gi|293404229|ref|ZP_06648223.1| hypothetical protein ECGG_02618 [Escherichia coli FVEC1412]
 gi|298380010|ref|ZP_06989615.1| hypothetical protein ECFG_02813 [Escherichia coli FVEC1302]
 gi|300901645|ref|ZP_07119705.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|218431450|emb|CAR12328.1| putative exported enzyme [Escherichia coli UMN026]
 gi|291428815|gb|EFF01840.1| hypothetical protein ECGG_02618 [Escherichia coli FVEC1412]
 gi|298279708|gb|EFI21216.1| hypothetical protein ECFG_02813 [Escherichia coli FVEC1302]
 gi|300354938|gb|EFJ70808.1| conserved hypothetical protein [Escherichia coli MS 198-1]
          Length = 615

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 AALREILQRTGMLDGGPKITLPGDDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|238913232|ref|ZP_04657069.1| hypothetical protein SentesTe_19204 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
          Length = 615

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 126/467 (26%), Positives = 195/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                              
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAAVVETSVAQPVDEPTARHSKPAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|222032656|emb|CAP75395.1| Uncharacterized protein ycbB [Escherichia coli LF82]
 gi|312945445|gb|ADR26272.1| hypothetical protein NRG857_04220 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 615

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPV 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|320177116|gb|EFW52131.1| L,D-transpeptidase YcbB [Shigella dysenteriae CDC 74-1112]
          Length = 611

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 153 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 199

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 200 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 248

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 249 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 308

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 309 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 368

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 369 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 426

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 427 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 486

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 487 NSLGRYKFNMPSSEAIYLHDTPTHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 545

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|197248211|ref|YP_002145913.1| hypothetical protein SeAg_B1001 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197211914|gb|ACH49311.1| YcbB [Salmonella enterica subsp. enterica serovar Agona str. SL483]
          Length = 615

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 126/467 (26%), Positives = 195/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                              
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDETSVAQPVDEQTARRSKPAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWTTITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|215486050|ref|YP_002328481.1| hypothetical protein E2348C_0918 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215264122|emb|CAS08466.1| predicted carboxypeptidase [Escherichia coli O127:H6 str. E2348/69]
          Length = 615

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPV 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTLMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|312969009|ref|ZP_07783216.1| putative peptidoglycan binding domain protein [Escherichia coli
           2362-75]
 gi|312286411|gb|EFR14324.1| putative peptidoglycan binding domain protein [Escherichia coli
           2362-75]
          Length = 611

 Score =  431 bits (1109), Expect = e-119,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 153 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 199

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 200 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 248

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 249 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPV 308

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 309 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 368

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 369 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 426

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 427 LARKDILPKVRNDPGYLESHGYTLMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 486

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 487 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 545

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|315296218|gb|EFU55525.1| conserved hypothetical protein [Escherichia coli MS 16-3]
          Length = 615

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P   
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPVPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|15800786|ref|NP_286800.1| hypothetical protein Z1272 [Escherichia coli O157:H7 EDL933]
 gi|15830262|ref|NP_309035.1| hypothetical protein ECs1008 [Escherichia coli O157:H7 str. Sakai]
 gi|168751189|ref|ZP_02776211.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4113]
 gi|168757018|ref|ZP_02782025.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4401]
 gi|168762937|ref|ZP_02787944.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4501]
 gi|168769921|ref|ZP_02794928.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4486]
 gi|168787355|ref|ZP_02812362.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC869]
 gi|195939660|ref|ZP_03085042.1| hypothetical protein EscherichcoliO157_25185 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208822650|ref|ZP_03262969.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|217326231|ref|ZP_03442315.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254792124|ref|YP_003076961.1| hypothetical protein ECSP_1029 [Escherichia coli O157:H7 str.
           TW14359]
 gi|261227428|ref|ZP_05941709.1| predicted carboxypeptidase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256149|ref|ZP_05948682.1| predicted carboxypeptidase [Escherichia coli O157:H7 str. FRIK966]
 gi|12514097|gb|AAG55410.1|AE005282_5 putative amidase [Escherichia coli O157:H7 str. EDL933]
 gi|13360467|dbj|BAB34431.1| putative amidase [Escherichia coli O157:H7 str. Sakai]
 gi|188014739|gb|EDU52861.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4113]
 gi|189355931|gb|EDU74350.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4401]
 gi|189361134|gb|EDU79553.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4486]
 gi|189366781|gb|EDU85197.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4501]
 gi|189372669|gb|EDU91085.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC869]
 gi|208738135|gb|EDZ85818.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209774750|gb|ACI85687.1| putative amidase [Escherichia coli]
 gi|209774752|gb|ACI85688.1| putative amidase [Escherichia coli]
 gi|209774756|gb|ACI85690.1| putative amidase [Escherichia coli]
 gi|217322452|gb|EEC30876.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254591524|gb|ACT70885.1| predicted carboxypeptidase [Escherichia coli O157:H7 str. TW14359]
 gi|320637793|gb|EFX07585.1| murein L,D-transpeptidase [Escherichia coli O157:H7 str. G5101]
 gi|326338180|gb|EGD62009.1| L,D-transpeptidase YcbB [Escherichia coli O157:H7 str. 1125]
          Length = 615

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 197/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQQALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +     E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAVMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|187776221|ref|ZP_02801228.2| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4196]
 gi|208809460|ref|ZP_03251797.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208815467|ref|ZP_03256646.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|209399966|ref|YP_002269597.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|187768375|gb|EDU32219.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4196]
 gi|208729261|gb|EDZ78862.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732115|gb|EDZ80803.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|209161366|gb|ACI38799.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|320192589|gb|EFW67230.1| L,D-transpeptidase YcbB [Escherichia coli O157:H7 str. EC1212]
 gi|326346157|gb|EGD69895.1| L,D-transpeptidase YcbB [Escherichia coli O157:H7 str. 1044]
          Length = 611

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 197/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 153 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQQALDKGQL 199

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +     E  +A    +     WP+L  +  L  G  S  V
Sbjct: 200 PTFVAGLAPQH--------PQYAVMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 248

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 249 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 308

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 309 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 368

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 369 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 426

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 427 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 486

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 487 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 545

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|259419164|ref|ZP_05743081.1| peptidoglycan-binding domain 1 [Silicibacter sp. TrichCH4B]
 gi|259345386|gb|EEW57240.1| peptidoglycan-binding domain 1 [Silicibacter sp. TrichCH4B]
          Length = 540

 Score =  431 bits (1109), Expect = e-118,   Method: Composition-based stats.
 Identities = 118/418 (28%), Positives = 204/418 (48%), Gaps = 13/418 (3%)

Query: 11  LYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPII 70
           L    V     +   L++ P     +D+ I    H +    F   +++          + 
Sbjct: 122 LSRALVDYATDLQTGLIDAPAR---IDDGIVRKKHQVDAASFLEGISKDRPAAFLQKLVP 178

Query: 71  SKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           +        +     + +++ GGW   +P+R +  G+S  +V  LR+RL+  G L P+  
Sbjct: 179 ASPQYRALLREKMRLETLMNAGGWGATVPVRKMEPGDSGPNVIALRDRLVSMGYLQPTA- 237

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            +  +D  +E AV+ FQ  HGL+  G+    TL  +N PV  RI+ + V + R + L  +
Sbjct: 238 -TRTYDLSLEDAVRRFQGEHGLEVDGVAGEGTLTEINRPVTDRIKSVLVAMERERWLTPE 296

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIP 247
           + G R++LVN+   S + V++G++   +  ++G  R DR+TP     ++ ++ NP W +P
Sbjct: 297 R-GPRHILVNLTDFSAKIVDDGEISFETRSVIGSNRSDRRTPEFSDEMDHMVINPSWYVP 355

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKI 305
           RSI+ K+ +  L+ +P     + I + D +G+ V    VD++     +F F  RQ P   
Sbjct: 356 RSIVTKEYLPKLKNNPN--AHSYIEITDNRGRVVNRNSVDFSQFTARSFPFAMRQPPSSR 413

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NA+   K  F ++ N Y+HDTP+  LF   VR  + GC+R++   D    LL       +
Sbjct: 414 NALGLVKFMFPNKYNIYLHDTPQKSLFGREVRAYSHGCIRLQKPFDFAYALLAPQTENPK 473

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
            +   V+ + K T V L T+VPVH +Y +A+  +D   +FR DIYG D      +   
Sbjct: 474 DYFHRVLNSGKETKVSLETKVPVHLIYRTAFVSQDGRAEFRRDIYGRDAKIWSALERA 531


>gi|144899601|emb|CAM76465.1| protein conserved in bacteria [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 532

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 114/406 (28%), Positives = 198/406 (48%), Gaps = 11/406 (2%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
            + +  V        +   I          R       +   +    P  +     + + 
Sbjct: 118 DLSIGRVAPTRQVGGMGAEIRPKLDGTAILRELAAGRELAATLIPVQPAYAG--YHRLKV 175

Query: 81  AIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           A+A Y+ + + GGW  +P  P +  G     +  +R+RLI++G+L  ++      DA + 
Sbjct: 176 ALARYEKLAADGGWSVIPDGPSIKAGMEDARLPLVRKRLIVTGELATNQSQGNTLDAPLI 235

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            AVK FQ RHG+DP G +   TL A+N+  + R+RQ+  NL R +  + +++   ++ VN
Sbjct: 236 EAVKRFQGRHGIDPDGAIGKQTLTALNISAEERVRQVAANLERWR-WMPRRLDSTHIAVN 294

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           +PAA  E V  G++ +   V+VG +  QTP + + +  ++ NP W +P SI  K+++  L
Sbjct: 295 LPAAHFELVREGRIDMAMRVVVGDIQHQTPTMATTMTSVVINPTWTVPPSIATKEILPKL 354

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEE---VDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
           R+DP YL +NN+ ++D    +    +   +DW+      +  RQ PG  NA+   K    
Sbjct: 355 RKDPGYLANNNMRILDAFDGDFEKSQGLGIDWSKYSKFPYRLRQKPGSDNALGQVKFNLD 414

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           + ++ Y+HDTP+   F  + R  + GCVR+    DL   LL          ++E V    
Sbjct: 415 NGDDIYLHDTPKRQYFGRIFRALSHGCVRLERPTDLAKLLLPAQ----ADKLDEWVLDDT 470

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           T  VKL   + V+ +Y++AWS +D  + FR+D+YG D+     +  
Sbjct: 471 TRTVKLDKPLTVYLMYMTAWSDEDGTVHFREDLYGHDSRLKTALKR 516


>gi|293409302|ref|ZP_06652878.1| hypothetical protein ECEG_00235 [Escherichia coli B354]
 gi|291469770|gb|EFF12254.1| hypothetical protein ECEG_00235 [Escherichia coli B354]
          Length = 615

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITDSNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|323967172|gb|EGB62596.1| ykud domain-containing protein [Escherichia coli M863]
 gi|327253715|gb|EGE65344.1| putative peptidoglycan binding domain protein [Escherichia coli
           STEC_7v]
          Length = 615

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPV 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLFYLTAFVGADGRTQYRTDIYNYD 597


>gi|220931487|ref|YP_002508395.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H
           168]
 gi|219992797|gb|ACL69400.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H
           168]
          Length = 547

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 125/398 (31%), Positives = 209/398 (52%), Gaps = 19/398 (4%)

Query: 36  LDEIINESYHSIVNDRFD--NFLARVDMGIDSDIP-------IISKETIAQTEKAIAFYQ 86
           LD +   + + + N  +D    + +++  I+ +            +E   +  KA++  +
Sbjct: 142 LDLLTGYTRNGMFNKMYDKHELIKKLNRAIEQESLGKFFIDLYPGQELYFRMRKALSHLR 201

Query: 87  DILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKL 144
           +I S+  WP +   P L  G+ S  +  LR RL +SGDL   +      FD  +E AV+ 
Sbjct: 202 NISSK-DWPRVGYGPPLQRGDYSKRIIELRRRLYLSGDLSEEQLNTGTYFDRELEKAVRK 260

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ RHGL  SG+VD  T+EA+N+PV  +I ++ +N+ R++  L +      V+VNIP   
Sbjct: 261 FQRRHGLKDSGIVDDKTIEALNIPVKEKINKIIINMERLR-WLPRDNPDLCVMVNIPEYK 319

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L+ +   KV L S VIVG  + QTP  +  I  I+ NPYW IP +I + +++  +++DP 
Sbjct: 320 LKVIREDKVILESKVIVGSRENQTPSFNDSIEYIVLNPYWYIPDNITRYELLPQIKKDPD 379

Query: 265 YLKDNNIHMIDEKGKEVFV---EEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRN 319
           YL  +NI ++     EV +   ++++W+   P NF +  RQ PG  N++ S K  F +  
Sbjct: 380 YLDKHNIQILSGFEGEVKIIPEDQINWDEVTPENFSYKLRQKPGPGNSLGSIKFLFPNDF 439

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
           N Y+HDTP   LF    R  + GC+RV   ++L   +L     WS   +  ++ +     
Sbjct: 440 NVYLHDTPSRGLFEYRERALSHGCIRVERPLELAK-VLISQSNWSYNEVISIINSGNREV 498

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           ++L   VP++ +Y++ W   D +I +R+DIY  D   V
Sbjct: 499 IELKNPVPIYLIYLTVWVDDDGVIHYREDIYQRDKKLV 536


>gi|161614766|ref|YP_001588731.1| hypothetical protein SPAB_02518 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161364130|gb|ABX67898.1| hypothetical protein SPAB_02518 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 615

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 126/467 (26%), Positives = 195/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                              
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVADETSVAQPVDEPTARRSKPAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|331646190|ref|ZP_08347293.1| putative amidase [Escherichia coli M605]
 gi|330910705|gb|EGH39215.1| l,D-transpeptidase YcbB [Escherichia coli AA86]
 gi|331044942|gb|EGI17069.1| putative amidase [Escherichia coli M605]
          Length = 615

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQITSRSKPAPV 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQTWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|146311101|ref|YP_001176175.1| hypothetical protein Ent638_1444 [Enterobacter sp. 638]
 gi|145317977|gb|ABP60124.1| Peptidoglycan-binding domain 1 protein [Enterobacter sp. 638]
          Length = 607

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 133/471 (28%), Positives = 204/471 (43%), Gaps = 70/471 (14%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N+ LY    Y +    LS             +IN+   ++     
Sbjct: 162 MMGYLQFIAGIPVNGNRWLYSDKAYKLATPALS-------------VINQWQLALDQGTL 208

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A   +++     +     WP+L     L  G  S  V
Sbjct: 209 PRFIASLAPA---------HPQYATMHQSLLKL--VADTRPWPQLRGTATLRPGQWSSDV 257

Query: 112 QRLRERLIISGDLDPSK-----------------------------GLSVAFDAYVESAV 142
             LRE L+ SG                                   G   A+D  + +AV
Sbjct: 258 PALREILLRSGATGAEPKIALPGDDPQGVVVSPSAPAPEVKAALPTGKPAAYDRELVAAV 317

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           K FQM  GL   G++  ST + +NV    R   L +N+ R++ LL   +    ++VNIPA
Sbjct: 318 KTFQMTQGLGADGVIGPSTRDWLNVSPAQRAGVLALNIQRLR-LLPGTLS-TGIMVNIPA 375

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  L  D
Sbjct: 376 YSLVYYQNGSEVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKLWDD 435

Query: 263 PQYLKDNNIHMIDEKG--KEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSR 318
           P YL+ +   ++      + +   +VDW +  P N  FR  Q PG+ N++   K    S 
Sbjct: 436 PGYLERHGYTVMRGWNSSQAIDPYQVDWATITPSNLPFRFQQAPGERNSLGRYKFNMPSS 495

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +  Y+HDTP   LF    R  +SGCVRV    +L   LL D   W+   I + +K   T 
Sbjct: 496 DAIYLHDTPNHNLFQKDARALSSGCVRVNKASELANMLLGDA-GWNDTRISDTLKEGNTR 554

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
            V +   +PV+  Y++A+  +D   Q+R DIY  D     G   LP+   +
Sbjct: 555 YVNIRHNIPVNLYYLTAFVGEDGRTQYRTDIYNYDLTARSGAQILPKAEQL 605


>gi|221639179|ref|YP_002525441.1| peptidoglycan-binding domain 1 protein [Rhodobacter sphaeroides
           KD131]
 gi|221159960|gb|ACM00940.1| Peptidoglycan-binding domain 1 protein precursor [Rhodobacter
           sphaeroides KD131]
          Length = 518

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 121/408 (29%), Positives = 194/408 (47%), Gaps = 13/408 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIAQ 77
           +L     L    +    +D  I  +   +        F A     +DS  P       A+
Sbjct: 106 LLAWAHDLHGGALEPGKVDPGIKRAVKRLDPRSVLTAFEANPVHFLDSLAP--RGPDYAR 163

Query: 78  TEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             +A    +  ++ GGW   +P   L  G +      LR+RL+  G L  S   S  +DA
Sbjct: 164 LMRARLDLEATVAAGGWGAAVPAGKLKPGATGPGFLALRDRLMAMGYLGRSTAAS--YDA 221

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            V +AV+ FQ  HGL P G+    T+ A+NV  + R++ + V L R +  L    G R++
Sbjct: 222 EVAAAVRSFQTDHGLSPDGVAGEGTIAALNVAPEARLKSILVALERER-WLSIDRGERHI 280

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            VN+   S   ++NGKV   +  ++G+   D++TP     +  ++ NP W +PRSI  K+
Sbjct: 281 WVNLADFSTRLIDNGKVTFETRSVIGKDSPDQRTPEFSDEMEYMVINPSWHVPRSITTKE 340

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            + LL+++P      ++ +ID +G+EV    V++N+    NF F  RQ P   NA+   K
Sbjct: 341 YLPLLQRNPN--AAGHLKLIDSRGREVSRGAVNFNAYNARNFPFSMRQPPSDGNALGLVK 398

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F ++ N Y+HDTP   LF+  VR  + GC+R+    D    LL           +  +
Sbjct: 399 FMFPNQWNIYLHDTPSKSLFDREVRAFSHGCIRLGRPFDFAYALLAAQTDDPEGLFQSHL 458

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            + + + V+L   VPVH VY +AW+     + +RDDIYG D V    +
Sbjct: 459 SSGRESVVRLEKPVPVHLVYFTAWAGPTGQMNYRDDIYGRDGVIFDAL 506


>gi|126737821|ref|ZP_01753551.1| peptidoglycan binding protein, putative [Roseobacter sp. SK209-2-6]
 gi|126721214|gb|EBA17918.1| peptidoglycan binding protein, putative [Roseobacter sp. SK209-2-6]
          Length = 537

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 110/423 (26%), Positives = 191/423 (45%), Gaps = 14/423 (3%)

Query: 6   KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS 65
           K+   L   FV     +   +++       +D+ +             N + +       
Sbjct: 115 KVEASLSEAFVTYAAQLQTGMLQPAT----IDDGMVRKRRDSDGAELLNGMQQAQPFAYL 170

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDL 124
              + +        +     + ++  GGW   +P   L  G+   +V  LR RLI  G L
Sbjct: 171 RALVPASPQYRALLREKQRLEQLVEAGGWGTSVPASKLEPGDQGAAVVSLRNRLIKMGFL 230

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
              +  S  +D  +E AV+ FQ  HGL+  G+  + TL+ +N PV  R++ + V + R +
Sbjct: 231 --QRSASATYDRNMERAVERFQSEHGLEVDGVAGTGTLKEINRPVQDRLKSVIVAMERER 288

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNP 242
            L  ++ G R+VLVN    +   V+NG V   +  ++G+   DR++P     +  ++ NP
Sbjct: 289 WLAPER-GERHVLVNQTDFTARIVDNGDVTFETRSVIGKNTHDRRSPEFSDTMEHMVINP 347

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQ 300
            W +PRSII K+ +  LR +P  +   +I + D +G+ V     D++     NF +  +Q
Sbjct: 348 SWYVPRSIITKEYLPKLRNNPNAV--GHIQITDSRGRVVNRSTADFSQFTARNFPYAMKQ 405

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   NA+   K  F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL   
Sbjct: 406 PPSSRNALGLVKFMFPNKYNIYLHDTPQKSLFQREVRAFSHGCIRLAQPFEFAYALLARQ 465

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
               +     ++ + K T V+L  +VPVH +Y +A+       +FR D+YG D      +
Sbjct: 466 TEDPKAFFHRILSSGKETKVELEQQVPVHIIYRTAYVSNKGRAEFRRDVYGRDAKVWAAL 525

Query: 421 PLP 423
              
Sbjct: 526 ERA 528


>gi|261339259|ref|ZP_05967117.1| hypothetical protein ENTCAN_05495 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319116|gb|EFC58054.1| putative periplasmic protein [Enterobacter cancerogenus ATCC 35316]
          Length = 607

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 132/471 (28%), Positives = 203/471 (43%), Gaps = 70/471 (14%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N+ LY    Y +    LS             +IN+   S+ N   
Sbjct: 162 MMGYLQFVAGIPVNGNRWLYSQKPYKLATPALS-------------VINQWQLSLDNGDL 208

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSV 111
             F+A +                A   +++     +     WP+L     L  G  S  V
Sbjct: 209 PRFIASLAPA---------HPQYATMHQSLLAL--VADSRPWPQLRATATLRPGQWSSDV 257

Query: 112 QRLRERLIISGDLDPSKGL-----------------------------SVAFDAYVESAV 142
             LRE L  SG LD    +                               A+D  + +AV
Sbjct: 258 PALREILSRSGILDGGPNIALPGDDSQNVVVSPSAPVKEKKAVGLNNKPAAYDRELVAAV 317

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           K FQ   GL   G++  ST + +NV    R   L +N+ R++ LL   +    ++VNIPA
Sbjct: 318 KQFQAAQGLGADGVIGQSTRDWLNVSPAQRAGVLALNIQRLR-LLPGTLS-TGIMVNIPA 375

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            SL   ++G   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  D
Sbjct: 376 YSLVYYQDGNEVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWND 435

Query: 263 PQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSR 318
           P YL+ +   ++     +  +    VDW++    N  FR  Q PG  N++   K    S 
Sbjct: 436 PGYLERHGYTVMRGWNSKEAIDPYMVDWSTITASNLPFRFQQAPGAHNSLGRYKFNMPSS 495

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I + +K   T 
Sbjct: 496 DAIYLHDTPNHTLFQKDTRALSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTR 554

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
            V +   +PV+  Y++A+   D   Q+R DIY  D     G   LP+   +
Sbjct: 555 YVNIRHNIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSGAQILPKAEQL 605


>gi|320355292|ref|YP_004196631.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM
           2032]
 gi|320123794|gb|ADW19340.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM
           2032]
          Length = 636

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 115/404 (28%), Positives = 197/404 (48%), Gaps = 21/404 (5%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           L       S +D  +       +    D                   +     ++A+  Y
Sbjct: 201 LEATTPRTSPIDTYLTAIRTGAIQATLDKLSPH-------------HKAYVNLKEALIRY 247

Query: 86  QDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVK 143
           + I S+GGWP++P+ P L  G     V  +R RL I+     + G +   +D+++ +AVK
Sbjct: 248 KQIASKGGWPQVPMGPSLRPGAHDDRVPAIRRRLAITDHYHATGGGNAKQYDSHLVAAVK 307

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            FQ RH L+P G+V  ST+ AMNV V  RI+QL+VNL R + ++   M    ++V+I   
Sbjct: 308 AFQARHHLEPDGVVGKSTVMAMNVTVAERIKQLRVNLERTRWVI-HDMPSSNLIVDIAGF 366

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            L+   +      S V+VG+   QTPI  S I  I+ NP W I   I++ + +  + +DP
Sbjct: 367 MLQYYHDNAPVWTSKVMVGQPFHQTPIFRSAITYIVLNPTWTITPDIVKNETVPSIIKDP 426

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNT 321
            YL    + ++D  G  V    + W   +   F +  RQD G+ N++   K  F +  + 
Sbjct: 427 GYLAKQRLRVLDRNGNAVDPNTIPWTQYQGRYFPYTLRQDAGRDNSLGLIKFLFPNPYHV 486

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW--SRYHIEEVVKTRKTTP 379
           Y+HDTP   LF    R  + GC+RV+N ++L   +L + P    +   +++++ + KTT 
Sbjct: 487 YLHDTPSKSLFGRTRRAFSHGCIRVQNPLELGRMILANDPGNPTTPAKMDQILASGKTTT 546

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           V L   +P++ +Y++A   +D+ + F+ D+Y  D   +  +  P
Sbjct: 547 VILKQPLPIYLMYLTANV-QDNKVMFKPDLYSRDEGILTALNTP 589


>gi|300925397|ref|ZP_07141282.1| hypothetical protein HMPREF9548_03475 [Escherichia coli MS 182-1]
 gi|300418467|gb|EFK01778.1| hypothetical protein HMPREF9548_03475 [Escherichia coli MS 182-1]
          Length = 615

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQMTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVENPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|309701201|emb|CBJ00501.1| putative exported protein [Escherichia coli ETEC H10407]
          Length = 615

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 197/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LCDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q  G  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQASGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|312144057|ref|YP_003995503.1| ErfK/YbiS/YcfS/YnhG family protein [Halanaerobium sp.
           'sapolanicus']
 gi|311904708|gb|ADQ15149.1| ErfK/YbiS/YcfS/YnhG family protein [Halanaerobium sp.
           'sapolanicus']
          Length = 545

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 120/405 (29%), Positives = 199/405 (49%), Gaps = 9/405 (2%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
            +    +   +   V+ E  + S + I N      L   ++ ++    +   +   + + 
Sbjct: 136 SLATDYLSGKLDPEVILEDGDFSRNRIDNSEIFEGLKSENITVNLQSKLPESDYYQRLKH 195

Query: 81  AIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAF-DAYV 138
            +  Y+D      WPE+    L   G   + V +L + LI  G L         +  + +
Sbjct: 196 KLYIYRDSGEVEQWPEVDSGSLLAQGAEGIRVSQLSDNLINRGYLSEENIDDKYYFGSQL 255

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
            +AVK FQ  HGL   G+V   TLEA+N+P + RI+Q+ +N+ R +  L + +G RY+ V
Sbjct: 256 NAAVKEFQFNHGLSDDGIVGPQTLEALNIPYEKRIKQIMINMERWR-WLPKDLGERYIYV 314

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           NI   SL   E+  + +    IVG   R TP+    I  ++FNPYW +P+SI  +D++  
Sbjct: 315 NISDYSLNVYEDNNIIMNMKTIVGNEQRSTPVFSDEIRYLVFNPYWYVPKSIAVEDILPS 374

Query: 259 LRQDPQYLKDNNIHMIDEKGK----EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
           ++ D  YL +NN  +          ++   E++W + +  NF F  RQ+PG  NA+   K
Sbjct: 375 VKNDIDYLDENNYKIFAYNNNNTLRKIDASEIEWENIDEDNFNFLVRQEPGDENALGRVK 434

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F +R N Y+HDTP   LF+   R  +SGC+R+   I+L ++LLKD   W R  +EE++
Sbjct: 435 FMFPNRFNVYLHDTPSKYLFDETERGFSSGCIRIEKPIELALYLLKDQEEWDRETLEEIM 494

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           K      + L   +P++  Y +AW      + FR DIY  D + +
Sbjct: 495 KEDNEKTIYLDETIPIYLQYNTAWVDNFGNLNFRKDIYNRDKILI 539


>gi|323174974|gb|EFZ60589.1| putative peptidoglycan binding domain protein [Escherichia coli
           LT-68]
          Length = 615

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 197/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q  G  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQASGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|254503422|ref|ZP_05115573.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222439493|gb|EEE46172.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 562

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 114/406 (28%), Positives = 190/406 (46%), Gaps = 7/406 (1%)

Query: 20  LPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           L     L    +  + +++ +N            +  +  +D     +      +  A+ 
Sbjct: 153 LRYATHLSSGRVQPNKVNKALNLFPDRPDPTMLLEQAVEAIDFSAFLEGLAPRSDNYARL 212

Query: 79  EKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           ++ +A Y++  + G +  +P    L  G S   V  LR+RLI       ++     +D  
Sbjct: 213 KRRLAQYREKAATGPFTSVPDGDVLKPGMSDTRVAALRQRLIEEDIPGAAEHSGDVYDGV 272

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  AV  FQ  HGL   G++   TL  +N+P++ ++ Q+++N+ R ++ +   +G  YV 
Sbjct: 273 LVEAVTTFQDHHGLANDGVIGKETLARLNIPLEEKLVQMELNMER-RRWMRDDLGSFYVF 331

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VN+    L+ V+ GK    + V+VG+    TP+    ++ +  NP+W +P SI   + + 
Sbjct: 332 VNLADQELKVVKEGKTIHTAPVVVGKPYHATPVFSDTLDYVEINPFWNVPYSIATSEYLP 391

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
            L+Q+P  L   NI +    G E+   ++ WNS    NF F  RQDPG  NA+   K  F
Sbjct: 392 KLKQNPSALSSKNIRVF-RDGTEIAPTQIAWNSYARGNFPFRLRQDPGNSNALGRIKFMF 450

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +  N Y+HDTP   LF+   R  + GC+RV +   L   LL      +  H E+V  T 
Sbjct: 451 PNEFNIYIHDTPSKSLFSRAERAFSHGCIRVSDPFALADVLLAHKNA-NEGHWEKVRDTE 509

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           K T VK +  + VH  Y++AW  KD    FR DIY  D   +  + 
Sbjct: 510 KRTVVKPSVPIEVHLTYLTAWMNKDGSTHFRKDIYRRDEKLLEALR 555


>gi|26246952|ref|NP_752992.1| hypothetical protein c1067 [Escherichia coli CFT073]
 gi|227884110|ref|ZP_04001915.1| peptidoglycan binding domain protein [Escherichia coli 83972]
 gi|300978416|ref|ZP_07174264.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|301047814|ref|ZP_07194866.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|331656996|ref|ZP_08357958.1| putative amidase [Escherichia coli TA206]
 gi|26107352|gb|AAN79535.1|AE016758_139 Hypothetical protein ycbB [Escherichia coli CFT073]
 gi|227838862|gb|EEJ49328.1| peptidoglycan binding domain protein [Escherichia coli 83972]
 gi|300300306|gb|EFJ56691.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300409658|gb|EFJ93196.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|307552764|gb|ADN45539.1| putative peptidoglycan binding domain protein [Escherichia coli ABU
           83972]
 gi|315291223|gb|EFU50583.1| conserved hypothetical protein [Escherichia coli MS 153-1]
 gi|331055244|gb|EGI27253.1| putative amidase [Escherichia coli TA206]
          Length = 615

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+  +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVVGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPV 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNNREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|62179522|ref|YP_215939.1| hypothetical protein SC0952 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62127155|gb|AAX64858.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322713990|gb|EFZ05561.1| N-6 adenine-specific DNA methylase, conserved site [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 615

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 127/467 (27%), Positives = 195/467 (41%), Gaps = 81/467 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLANTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                          S   
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAAVVETSVAQPVDEPTARRSKSAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+  
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDA 550

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            I   +K   T  V +    PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 RISGALKQGDTRYVNIRQNTPVNLYYLTAFVGADGRMQYRTDIYNYD 597


>gi|254512058|ref|ZP_05124125.1| peptidoglycan-binding domain 1 [Rhodobacteraceae bacterium KLH11]
 gi|221535769|gb|EEE38757.1| peptidoglycan-binding domain 1 [Rhodobacteraceae bacterium KLH11]
          Length = 533

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 118/404 (29%), Positives = 205/404 (50%), Gaps = 12/404 (2%)

Query: 23  GLSLVEKPIHASVLDE-IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
              L    +  + +D  ++ E      ++     ++         +   S++ IA  ++ 
Sbjct: 124 ASDLQSGSVRPAQIDAGLVREVERRAADEHLRQLVSSEGAAYFRALMPQSRQYIALMKQK 183

Query: 82  IAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
            A  + ++++GGW   +P+  L LG++  +V +LR RL+  G L P+   S  +D  +  
Sbjct: 184 KAL-EALIAQGGWGETVPVTKLELGDTGANVIKLRNRLVAMGYLKPTA--SPIYDDELLG 240

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AV+ FQ+ HGL+P G+    T+  +N PV  R++ + V L R +  L ++ G R++LVN 
Sbjct: 241 AVQAFQIAHGLEPDGVAGKGTITEVNRPVSDRLKAVYVALERER-WLPEERGERHILVNQ 299

Query: 201 PAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
              S + V++G+V   +  ++G+   DR++P     +  ++ NP W +PRSII K+ +  
Sbjct: 300 ADFSAKIVDDGQVTFETRAVIGKNTHDRRSPEFSDVMEHMVINPSWYVPRSIITKEYLPK 359

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFY 316
           LR +P  +   +I + D +G++V    VD+N     NF F  RQ P K NA+   K  F 
Sbjct: 360 LRANPNAV--GHIQITDRQGRQVNRGAVDFNQFTARNFPFSMRQPPSKSNALGLVKFMFP 417

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           ++ N Y+HDTP+  LF+  VR  + GC+R+    +    LL       +     V+ T K
Sbjct: 418 NKYNIYLHDTPQKSLFSREVRAFSHGCIRLAQPFEFAYALLAKQEENPKAFFHRVLNTGK 477

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            T VKL  +VPVH +Y +A+      +Q+R D+Y  D      +
Sbjct: 478 ETTVKLDKKVPVHLIYRTAYIGPKGEVQYRRDVYDRDRKIWEAL 521


>gi|194434397|ref|ZP_03066660.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1012]
 gi|194417381|gb|EDX33487.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1012]
 gi|320182006|gb|EFW56911.1| L,D-transpeptidase YcbB [Shigella boydii ATCC 9905]
          Length = 615

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPDDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYTYD 597


>gi|332095888|gb|EGJ00895.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           155-74]
          Length = 611

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 153 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 199

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 200 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 248

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 249 PALREILQRTGMLDGGPKITLPDDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 308

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 309 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 368

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 369 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 426

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 427 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 486

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 487 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 545

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYTYD 593


>gi|331682434|ref|ZP_08383053.1| putative amidase [Escherichia coli H299]
 gi|331080065|gb|EGI51244.1| putative amidase [Escherichia coli H299]
          Length = 615

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+  +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVVGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPV 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|323976688|gb|EGB71776.1| ykud domain-containing protein [Escherichia coli TW10509]
          Length = 615

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 128/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  +
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDI 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTAETAETKAMDQQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A++  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYNNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|21674674|ref|NP_662739.1| hypothetical protein CT1862 [Chlorobium tepidum TLS]
 gi|21647879|gb|AAM73081.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 571

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 123/369 (33%), Positives = 183/369 (49%), Gaps = 19/369 (5%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPL--HLGNSSVSVQRLRERLIISGDLDPSK-- 128
                  K +  Y+ I   GGW  +   P    +G     +  +R+RLI+SGDL   K  
Sbjct: 195 PEYVLLRKNLLRYRKIAENGGWQPVYQGPNIEKVGQVDKRMPLIRQRLILSGDLAADKLV 254

Query: 129 -------------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                             +   +  AV  FQ  HGL   G++   TL AMN P +LR  Q
Sbjct: 255 APADSSLSSAAPVPSDQVYTQELFDAVLAFQQSHGLSADGIIGLETLNAMNYPAELRADQ 314

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           ++VNL R +      +G  YV+VNIPA SL+ V++ +V  +S VIVG+ D QTPI  ++I
Sbjct: 315 IRVNLERER-WYGGILGGTYVMVNIPAFSLKYVKDNEVRWKSRVIVGKPDTQTPIFAAQI 373

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
             + FNP+WVIP  I+ K+ +  +R+D  YL  + + ++D  GK V    V+W S     
Sbjct: 374 QSVTFNPHWVIPPGILSKEAIPAIRKDIGYLAKHQLTVVDSNGKPVDPSRVNWYSDGGFP 433

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +   Q  G   ++   K    +R   YMHDTP   LF   +R  + GCVRV    +L   
Sbjct: 434 YRLVQASGDDGSLGRIKFNMPNRFMVYMHDTPTKPLFERSMRAYSHGCVRVDRPYELAEQ 493

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           L++D+  WS   IE  + T KT  + L  +VPV+F Y +A++  +  I FR+DIY  D  
Sbjct: 494 LMRDSKNWSLSKIEAAINTGKTRTIPLTVKVPVYFFYQTAFADGN-KIGFRNDIYDRDKK 552

Query: 416 HVGIIPLPE 424
            +  +   +
Sbjct: 553 LLDALNSNQ 561


>gi|323190745|gb|EFZ76014.1| putative peptidoglycan binding domain protein [Escherichia coli
           RN587/1]
          Length = 615

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 200/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPV 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP+YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPRYLESHGYTLMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|261246211|emb|CBG24015.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
          Length = 613

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 125/465 (26%), Positives = 194/465 (41%), Gaps = 79/465 (16%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD---------------------------------------PSKGLSV 132
             LRE L  +G LD                                            + 
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDETSVAHDEPTARRSKPAPAAR 313

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  +   
Sbjct: 314 AYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL-- 371

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +
Sbjct: 372 STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLAR 431

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAM 308
           KD++  +  D  YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N++
Sbjct: 432 KDILPKVWNDLGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSL 491

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I
Sbjct: 492 GRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARI 550

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 551 SGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 595


>gi|254464823|ref|ZP_05078234.1| peptidoglycan-binding domain 1 [Rhodobacterales bacterium Y4I]
 gi|206685731|gb|EDZ46213.1| peptidoglycan-binding domain 1 [Rhodobacterales bacterium Y4I]
          Length = 542

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 187/416 (44%), Gaps = 10/416 (2%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
                 ++     L    +  S +D+ +    H++    F   +            + + 
Sbjct: 123 AALSMALVDYATDLQTGLLEPSRIDDGMVRKKHTVDGASFLAGIRDTQPFAYMRSLVPAS 182

Query: 73  ETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
                  +     + +L+ GGW P +  + L  G    +V  LR RL+  G L  S   S
Sbjct: 183 PQYRGLMREKLRLEQVLAAGGWGPAVQAKTLEPGEQGPAVIALRNRLMAMGYLPRSAARS 242

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +DA +  AV+ FQ  HGL+  G+  + TL  +N PV  R++ + + + R +  L    
Sbjct: 243 --YDAAMVQAVQSFQSDHGLETDGVAGAGTLAEVNKPVSDRLKSVIIAMERER-WLSPDR 299

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRS 249
           G R++LVN    + + V+NG V   +  ++G+   DR++P     +  ++ NP W +PRS
Sbjct: 300 GERHILVNQTDFTAKIVDNGDVTFETRSVIGKNTDDRRSPEFSDEMEHMVINPSWYVPRS 359

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINA 307
           II K+ +  LR +P  +   +I + D +G+ V     D++     NF +  RQ P   NA
Sbjct: 360 IITKEYLPKLRNNPNAV--GHIQITDRRGRVVNRSAADFSQYNARNFPYSMRQPPSSSNA 417

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +  
Sbjct: 418 LGLVKFMFPNKYNIYLHDTPQKSLFAREVRAFSHGCIRLAQPFEFAYALLARQTEDPKAF 477

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
              ++ + + T V+L  +VPVH +Y +A        +FR D+YG D      +   
Sbjct: 478 FHRILNSGQETKVELEQKVPVHIIYRTAVVSSKGRAEFRRDVYGRDAKIWAALERA 533


>gi|320196581|gb|EFW71204.1| L,D-transpeptidase YcbB [Escherichia coli WV_060327]
          Length = 611

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 153 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 199

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 200 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 248

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 249 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPV 308

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A++  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 309 VRAAYENELVEAVKRFQTWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 368

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 369 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 426

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 427 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 486

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 487 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 545

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|24112334|ref|NP_706844.1| hypothetical protein SF0922 [Shigella flexneri 2a str. 301]
 gi|24051196|gb|AAN42551.1| putative amidase [Shigella flexneri 2a str. 301]
 gi|332759013|gb|EGJ89323.1| putative peptidoglycan binding domain protein [Shigella flexneri
           4343-70]
 gi|332760103|gb|EGJ90401.1| putative peptidoglycan binding domain protein [Shigella flexneri
           2747-71]
 gi|332767712|gb|EGJ97903.1| L,D-transpeptidase YcbB [Shigella flexneri 2930-71]
 gi|333006182|gb|EGK25691.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-218]
          Length = 615

 Score =  428 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 131/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPIKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   EVDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWEVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|333001241|gb|EGK20809.1| putative peptidoglycan binding domain protein [Shigella flexneri
           VA-6]
          Length = 615

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 199/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPIKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|146277082|ref|YP_001167241.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555323|gb|ABP69936.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 544

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 118/374 (31%), Positives = 184/374 (49%), Gaps = 10/374 (2%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRER 117
            D     +         A+  +A    +  ++ GGW  ++P   L  G +   V  LR R
Sbjct: 171 ADPRPFLNGLAPRTPEYARLMRARMELEARIAAGGWGLQVPAGKLRPGATGEGVLALRNR 230

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L++ G L  S   S  +DA +E+AV+ FQ+ HGL P G+V   TL AMNV  + R+  + 
Sbjct: 231 LMVMGYLGRSTVAS--YDASIEAAVRAFQIDHGLTPDGVVGEGTLAAMNVSPETRLESVL 288

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRI 235
           V L R +  L    G R++ VN+   S   VE GKV   +  ++G+   D+++P     +
Sbjct: 289 VALERER-WLAIDRGERHIWVNLTDFSARIVEGGKVTFETRSVIGKDSPDQRSPEFSDEM 347

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
             ++ NP W +PRSI  K+ + LL+++P      ++ +ID +G+ V    V++N+    N
Sbjct: 348 EYMVINPSWHVPRSITTKEYLPLLQRNPNAAA--HLKLIDSRGQVVNRGSVNFNAYNARN 405

Query: 296 FIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           F +  RQ P   NA+   K  F +  N Y+HDTP   LF+  VR  + GC+R+    D  
Sbjct: 406 FPYSMRQPPSDGNALGLVKFMFPNPWNIYLHDTPSKSLFDREVRAFSHGCIRLAQPFDFA 465

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             LL           +  ++T K T V+L   VPVH VY +AW+     + +R DIYG D
Sbjct: 466 YALLARQSDDPEGLFQSHLRTGKETVVRLEEPVPVHLVYSTAWAGPTGRMSYRQDIYGRD 525

Query: 414 NVHVGIIPLPEDHP 427
            V +  +      P
Sbjct: 526 GVILEALRAAGVVP 539


>gi|110641122|ref|YP_668852.1| hypothetical protein ECP_0936 [Escherichia coli 536]
 gi|191172097|ref|ZP_03033641.1| putative peptidoglycan binding domain [Escherichia coli F11]
 gi|300983088|ref|ZP_07176432.1| hypothetical protein HMPREF9553_02391 [Escherichia coli MS 200-1]
 gi|110342714|gb|ABG68951.1| hypothetical protein YcbB [Escherichia coli 536]
 gi|190907624|gb|EDV67219.1| putative peptidoglycan binding domain [Escherichia coli F11]
 gi|300306992|gb|EFJ61512.1| hypothetical protein HMPREF9553_02391 [Escherichia coli MS 200-1]
 gi|324009854|gb|EGB79073.1| hypothetical protein HMPREF9532_00405 [Escherichia coli MS 57-2]
 gi|324012952|gb|EGB82171.1| hypothetical protein HMPREF9533_03020 [Escherichia coli MS 60-1]
          Length = 615

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 197/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+  +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVVGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P   
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPVPV 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQTWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|30062460|ref|NP_836631.1| hypothetical protein S0986 [Shigella flexneri 2a str. 2457T]
 gi|30040706|gb|AAP16437.1| putative amidase [Shigella flexneri 2a str. 2457T]
 gi|281600285|gb|ADA73269.1| putative amidase [Shigella flexneri 2002017]
 gi|332762697|gb|EGJ92960.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-671]
 gi|333020100|gb|EGK39371.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-304]
          Length = 615

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPIKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +                A   +++     +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQ---------HPQYAAMHESLLVL--LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   EVDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWEVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|313650833|gb|EFS15234.1| putative peptidoglycan binding domain protein [Shigella flexneri 2a
           str. 2457T]
          Length = 611

 Score =  428 bits (1101), Expect = e-117,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 153 MMGYLHFIANIPIKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 199

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +                A   +++     +     WP+L  +  L  G  S  V
Sbjct: 200 PTFVAGLAPQ---------HPQYAAMHESLLVL--LSDTKPWPQLTGKATLRPGQWSNDV 248

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 249 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 308

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 309 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 368

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 369 L--STGIMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 426

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   EVDW++    N  FR  Q PG  
Sbjct: 427 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWEVDWSTITASNLPFRFQQAPGPR 486

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 487 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 545

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 593


>gi|218688768|ref|YP_002396980.1| hypothetical protein ECED1_0955 [Escherichia coli ED1a]
 gi|218426332|emb|CAR07157.1| putative exported enzyme [Escherichia coli ED1a]
          Length = 615

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P   
Sbjct: 253 PALREILQRTGMLDGGSKITLPGDDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPVPV 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A++  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYENELVEAVKRFQTWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|159044168|ref|YP_001532962.1| hypothetical protein Dshi_1619 [Dinoroseobacter shibae DFL 12]
 gi|157911928|gb|ABV93361.1| hypothetical protein Dshi_1619 [Dinoroseobacter shibae DFL 12]
          Length = 536

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 121/408 (29%), Positives = 190/408 (46%), Gaps = 14/408 (3%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQ 77
           L     +    +  S +D+ I  S      DR     A         I  +  ++   A+
Sbjct: 124 LQYAQDVQSGALSPSRIDKTIVRSL--PRRDRLAQITAFSKSNASRFIKALPPQSNGYAR 181

Query: 78  TEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             KA    +  +  GGW P++    L  G S   V  LR+RLI  G L   + +S  +DA
Sbjct: 182 LMKAKLEMEKTIGAGGWGPKVTAAALKPGQSGPQVVALRDRLIRMGYLK--RTVSATYDA 239

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            ++ AV+ FQ  HGL   G+    TL  +N     R++ + V L R +  +  ++G R++
Sbjct: 240 ALQVAVQRFQQDHGLAADGVAAKITLREINTEPTERLKSIIVGLERER-WMNFELGPRHI 298

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +VNIP      +ENGK    + V+VG+   DR+TP     ++ ++ NP W +PRSI  K+
Sbjct: 299 MVNIPDFHARVMENGKEVFATRVVVGKNTSDRRTPEFSDEMDHMVINPTWNVPRSIATKE 358

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            +  L+++P     + + ++D  G+ V   EVD+      +F F  +Q P   NA+   K
Sbjct: 359 YLPKLQENPN--AHSYMRLVDASGRTVNRAEVDFTQFNARSFPFDIKQPPSNRNALGLVK 416

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F +++N Y+HDTP   LF    R  + GCVRV +  D    LL           +  +
Sbjct: 417 FMFPNKHNIYLHDTPAKSLFGRESRAYSHGCVRVADPFDFAYELLSKQERDPEGFFKTTL 476

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
              K T V L   VPVH VY +A++P     Q+R D+YG D      +
Sbjct: 477 AKGKETWVYLDKPVPVHLVYQTAFAPAKGNTQYRRDVYGRDARLWDAL 524


>gi|82777551|ref|YP_403900.1| hypothetical protein SDY_2332 [Shigella dysenteriae Sd197]
 gi|81241699|gb|ABB62409.1| putative amidase [Shigella dysenteriae Sd197]
          Length = 615

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K    LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTHWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWKVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLEIHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|309787798|ref|ZP_07682408.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1617]
 gi|308924197|gb|EFP69694.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1617]
          Length = 610

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 198/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K    LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 152 MMGYLHFIANIPVKGTHWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 198

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 199 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 247

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 248 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 307

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 308 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 367

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 368 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWKVPPT 425

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 426 LARKDILPKVRNDPGYLEIHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 485

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 486 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 544

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 545 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 592


>gi|332092543|gb|EGI97616.1| putative peptidoglycan binding domain protein [Shigella boydii
           5216-82]
          Length = 611

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 129/468 (27%), Positives = 197/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 153 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 199

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 200 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 248

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 249 PALREILQRTGMLDGGPKITLPDDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 308

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +   VK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 309 VRAAYDNELVEVVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 368

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 369 L--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 426

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 427 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 486

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 487 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWND 545

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 546 KRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYTYD 593


>gi|206576426|ref|YP_002239427.1| putative peptidoglycan binding protein [Klebsiella pneumoniae 342]
 gi|288936277|ref|YP_003440336.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
 gi|206565484|gb|ACI07260.1| putative peptidoglycan binding protein [Klebsiella pneumoniae 342]
 gi|288890986|gb|ADC59304.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
          Length = 596

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 123/445 (27%), Positives = 196/445 (44%), Gaps = 59/445 (13%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        +  + LY    Y +    LS             +IN+   ++ N   
Sbjct: 161 MMGYLHFISGIPTQGTRWLYSSTPYKMATPPLS-------------VINQWQLALDNGSL 207

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                    +++     +     WP++     L  G  S  +
Sbjct: 208 PAFIAGLAPH---------HPQYEAMHQSLLAL--VADSRPWPQMTGSGSLRPGEWSNDI 256

Query: 112 QRLRERLIISGDLDPSK-------------------GLSVAFDAYVESAVKLFQMRHGLD 152
             LRE L  +G LD +                         +D  +   VK FQ   GL 
Sbjct: 257 GALREILQRTGMLDNTANIVLPGDVVSPSAKKKSKPAARGVYDRQLVEGVKRFQAMQGLG 316

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++  ST + +NV    R   L +N+ R++ LL  K+    ++VNIPA SL   ++G 
Sbjct: 317 ADGVIGQSTRDWLNVSSAQRAGVLALNIQRLR-LLPGKLS-TGIMVNIPAFSLVYYQDGS 374

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R +P YL+ +   
Sbjct: 375 QVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYT 434

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++     +  +    VDW++    N  FR  Q PG  N++   K    S +  Y+HDTP 
Sbjct: 435 VMRGWNSKETIDPYRVDWSTITENNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPN 494

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF   VR  +SGCVRV    +L   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 495 HNLFQKDVRALSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPV 553

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 554 NLYYLTAFVDADGRTQYRTDIYNYD 578


>gi|260597325|ref|YP_003209896.1| murein L,D-transpeptidase [Cronobacter turicensis z3032]
 gi|260216502|emb|CBA29674.1| Uncharacterized protein ycbB [Cronobacter turicensis z3032]
          Length = 521

 Score =  426 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 131/471 (27%), Positives = 202/471 (42%), Gaps = 70/471 (14%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           MVGYL+         N+ LY    Y      L              ++N+   ++ N   
Sbjct: 76  MVGYLQFISGIPSQGNRWLYSEKPYKPEMPAL-------------NVLNQWQVALDNGSV 122

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+  +                A    ++   Q +     WP++  +  L  G  S  V
Sbjct: 123 PAFVRSLAPV---------HPHYAAMHASL--LQLVADTRPWPQMTGKEKLRPGQWSSDV 171

Query: 112 QRLRERLIISGDLD----------------------------PSKGLSVAFDAYVESAVK 143
             L+E L  +G LD                              K     +D  + +AVK
Sbjct: 172 PALKEILQRTGMLDGGPDIVLPGDNNGVVSPSAASQPASQTSTPKPARAVYDKDLVAAVK 231

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            FQ   GL   G++  ST + +NV    R   L +N+ R++ LL  K+    ++VNIP  
Sbjct: 232 RFQKWQGLGADGVIGQSTRDWLNVTPAQRAALLALNIQRLR-LLPGKLS-TGIMVNIPEY 289

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
           SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP
Sbjct: 290 SLVYYQNGSPVLASRVIVGRPDRKTPLMSSALNNVVVNPPWNVPPTLARKDILPKVWNDP 349

Query: 264 QYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSR 318
            YL+ +   +++  G     V    VDW +  P N  FR  Q PG  N++   K    S 
Sbjct: 350 GYLESHGYTVLNGWGSNADVVDPWMVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSS 409

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I + +K   T 
Sbjct: 410 DAIYLHDTPNHNLFQRDSRALSSGCVRVNKASELANMLLQDA-GWNDSRISQTLKEGNTR 468

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
            V +   +PV+  Y++A+  +D   Q+R DIY  D     G   LP+   +
Sbjct: 469 YVNIPQTIPVNLYYLTAFIGEDGRPQYRTDIYNYDHTARSGAQILPKVEQL 519


>gi|238893981|ref|YP_002918715.1| hypothetical protein KP1_1925 [Klebsiella pneumoniae NTUH-K2044]
 gi|238546297|dbj|BAH62648.1| putative amidase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 596

 Score =  426 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 123/445 (27%), Positives = 196/445 (44%), Gaps = 59/445 (13%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        +  + LY    Y +    LS             +IN+   ++ N   
Sbjct: 161 MMGYLHFISGIPTQGTRWLYSSTPYKMATPPLS-------------VINQWQLALDNGSL 207

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                    +++     +     WP++     L  G  S  +
Sbjct: 208 PAFIAGLAPR---------HPQYEAMHQSLLAL--VADSRPWPQMTGSGSLRPGEWSNDI 256

Query: 112 QRLRERLIISGDLDPSK-------------------GLSVAFDAYVESAVKLFQMRHGLD 152
             LRE L  +G L+ S                         +D  +   VK FQ   GL 
Sbjct: 257 GALREILQRTGMLENSANIVLPGDVVSPSAKKKSKPAARGVYDRQLVEGVKRFQAMQGLG 316

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++  ST + +NV    R   L +N+ R++ LL  K+    ++VNIPA SL   ++G 
Sbjct: 317 ADGVIGQSTRDWLNVSSAQRAGVLALNIQRLR-LLPGKLS-TGIMVNIPAFSLVYYQDGS 374

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R +P YL+ +   
Sbjct: 375 QVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYT 434

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++     +  +    VDW++    N  FR  Q PG  N++   K    S +  Y+HDTP 
Sbjct: 435 VMRGWNSKETIDPYRVDWSTITENNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPN 494

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF   VR  +SGCVRV    +L   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 495 HNLFQKDVRALSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPV 553

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 554 NLYYLTAFVDADGRTQYRTDIYNYD 578


>gi|149915292|ref|ZP_01903820.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           AzwK-3b]
 gi|149811013|gb|EDM70852.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           AzwK-3b]
          Length = 536

 Score =  426 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 108/377 (28%), Positives = 187/377 (49%), Gaps = 11/377 (2%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVS 110
             NF+          +P  S E     ++ +   + +  RGGW P +    +  G S  +
Sbjct: 157 LTNFMQSSPSAFFRALPPQSNEYARLMKEKL-RLERLADRGGWGPTVSAESVKPGQSGAA 215

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  LR+RL+  G LD S   +  +D  +  AV+ FQ+ HGL P G+    TL  +NVPV 
Sbjct: 216 VTALRDRLVAMGFLDRSA--TQLYDETMLHAVQRFQLAHGLTPDGVAGPGTLAEINVPVQ 273

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQT 228
            R++ L V + R +  +   +G R++LVN+       +++G V   + V++G+   DR++
Sbjct: 274 ERLKSLIVAMERER-WINMALGERHILVNLTDFHARIIDDGAVSFETRVVIGKNTGDRRS 332

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P     ++ ++ NP W +PRSI   + +  ++++P  +   ++ + + +G++V    V++
Sbjct: 333 PEFSDEMDHMVINPTWHVPRSIAVGEYLPKMKRNPNAVS--HLKLYNNRGQQVSRGAVNF 390

Query: 289 NSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
            +    NF F  +Q P + NA+   K  F ++ N Y+HDTP   LF   VR  + GCVRV
Sbjct: 391 AAYNASNFPFSIKQPPSQSNALGLVKFMFPNKYNIYLHDTPAKDLFGREVRAYSHGCVRV 450

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
           +   +L   LL    T  +     ++ T +   V L   VPVH +Y +A++     +Q+R
Sbjct: 451 QKPFELAYELLSKQETDPKRTFHSILDTGREKRVNLEQVVPVHIIYRTAFTQAKGPVQYR 510

Query: 407 DDIYGLDNVHVGIIPLP 423
            DIYG D      +   
Sbjct: 511 RDIYGRDGRIWDALDKA 527


>gi|152969509|ref|YP_001334618.1| hypothetical protein KPN_00952 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150954358|gb|ABR76388.1| putative amidase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 577

 Score =  426 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 123/445 (27%), Positives = 195/445 (43%), Gaps = 59/445 (13%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        +  + LY    Y +    LS             +IN+   ++ N   
Sbjct: 142 MMGYLHFISGIPTQGTRWLYSSTPYKMATPPLS-------------VINQWQLALDNGSL 188

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                    +++     +     WP++     L  G  S  +
Sbjct: 189 PAFIAGLAPR---------HPQYEAMHQSLLAL--VADSRPWPQMTGSGSLRPGEWSNDI 237

Query: 112 QRLRERLIISGDLDPSK-------------------GLSVAFDAYVESAVKLFQMRHGLD 152
             LRE L  +G L  S                         +D  +   VK FQ   GL 
Sbjct: 238 GALREILQRTGMLKNSANIVLPGDVVSPSAKKKSKPAARGVYDRQLVEGVKRFQAMQGLG 297

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++  ST + +NV    R   L +N+ R++ LL  K+    ++VNIPA SL   ++G 
Sbjct: 298 ADGVIGQSTRDWLNVSSAQRAGVLALNIQRLR-LLPGKLS-TGIMVNIPAFSLVYYQDGS 355

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R +P YL+ +   
Sbjct: 356 QVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYT 415

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++     +  +    VDW++    N  FR  Q PG  N++   K    S +  Y+HDTP 
Sbjct: 416 VMRGWNSKETIDPYRVDWSTITENNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPN 475

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF   VR  +SGCVRV    +L   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 476 HNLFQKDVRALSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPV 534

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 535 NLYYLTAFVDADGRTQYRTDIYNYD 559


>gi|86138266|ref|ZP_01056840.1| peptidoglycan binding protein, putative [Roseobacter sp. MED193]
 gi|85824791|gb|EAQ44992.1| peptidoglycan binding protein, putative [Roseobacter sp. MED193]
          Length = 541

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 114/420 (27%), Positives = 194/420 (46%), Gaps = 17/420 (4%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP---- 68
             F  +   +  + V             +     +V +R D+  A    G+  + P    
Sbjct: 115 RDFGQVEAALSTAFVNYAAMVQTGLLKPSSIDSGMVRERRDHDGAAALAGMRDNQPFAYL 174

Query: 69  ---IISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDL 124
              + +        +     + + + GGW P +P   L  G++  +V  LR RLI  G +
Sbjct: 175 RTLVPASPQYRALMREKLRLEQLQAAGGWGPTVPGNKLEPGDTGTNVVALRNRLIALGYM 234

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           + S   S  +D  +E AV+ FQ  HGL+  G+    TL+ +N PV  R++ + + + R +
Sbjct: 235 ERSATAS--YDRDMERAVESFQADHGLEVDGVAGGGTLKEINRPVRDRLKSVIIAMERER 292

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNP 242
            L     G R+VLVN    + + ++NG V   +  ++G+   DR++P     +  ++ NP
Sbjct: 293 WLTP-DRGERHVLVNQTDFTAKIIDNGDVTFETRSVIGKNQSDRRSPEFSDVMEHLVINP 351

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQ 300
            W +PRSII K+ +  LR +P  +   +I + D +G+ V    VD++     +F F  RQ
Sbjct: 352 SWHVPRSIITKEYLPQLRNNPNAVS--HIQITDSRGRVVNRGSVDFSQYTARSFPFAMRQ 409

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   NA+   K  F +++N Y+HDTP+  LF   VR  + GC+R+    +    LL   
Sbjct: 410 PPSTRNALGLVKFIFPNKHNIYLHDTPQKSLFKREVRAFSHGCIRLAQPFEFAYALLAKQ 469

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
                     ++K+ K T V L  +VPVH +Y +A+       +FR D+YG D      +
Sbjct: 470 TEDPIDFFHRILKSGKETKVDLEQQVPVHIIYRTAYVSNKGRAEFRRDVYGRDAKVWAAL 529


>gi|254476277|ref|ZP_05089663.1| peptidoglycan-binding domain 1 [Ruegeria sp. R11]
 gi|214030520|gb|EEB71355.1| peptidoglycan-binding domain 1 [Ruegeria sp. R11]
          Length = 539

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 106/410 (25%), Positives = 190/410 (46%), Gaps = 10/410 (2%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           ++     L    +    +DE I    H      +   +                      
Sbjct: 126 LVNYAADLQTGLLEPRRIDEGIVRKKHQPDFASYLTGIRDQAPVAFLRSLAPQNPQYQAL 185

Query: 79  EKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
            +     + + + GGW P +  + L  G+   +V  LR RLI  G L+ S   S+ +D  
Sbjct: 186 LREKMRLEALQAAGGWGPTVSAKKLERGDQGGAVIALRNRLIEMGYLERSA--SLRYDTA 243

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +E AV+ FQ  HGL+  G+  + T+  +N PV  R++ + V + R + L     G R++L
Sbjct: 244 LEGAVQKFQAAHGLEADGVAGAGTISEINKPVSARLKSVLVAMERERWLTP-DRGERHIL 302

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           VN    + + ++NG+V  ++  ++G+   DR++P     +  ++ NP W +PRSII K+ 
Sbjct: 303 VNQTDFTAKIIDNGEVTFQTRSVIGKDHSDRRSPEFSDVMEHMVINPSWYVPRSIITKEY 362

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKI 313
           +  L+ +P  +   +I + D +G++V     D++     NF +  RQ P + NA+   K 
Sbjct: 363 LPKLKANPNAV--GHIEITDSRGRKVNRSTADFSQYTARNFPYAMRQPPSRKNALGLVKF 420

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +   + ++ 
Sbjct: 421 MFPNKYNIYLHDTPQKSLFQREVRAFSHGCIRLAQPFEFAYALLAKQTENPKQFFDRILS 480

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           + K T V L  +VPVH +Y +A+   +   ++R D+YG D      +   
Sbjct: 481 SGKETKVDLEQQVPVHLIYRTAFVTPEGRAEYRRDVYGRDAKVWAALERA 530


>gi|290510667|ref|ZP_06550037.1| ycbB [Klebsiella sp. 1_1_55]
 gi|289777383|gb|EFD85381.1| ycbB [Klebsiella sp. 1_1_55]
          Length = 596

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 123/445 (27%), Positives = 196/445 (44%), Gaps = 59/445 (13%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        +  + LY    Y +    LS             +IN+   ++ N   
Sbjct: 161 MMGYLHFISGIPTQGTRWLYSSTPYKMATPPLS-------------VINQWQLALDNGSL 207

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                    +++     +     WP++     L  G  S  +
Sbjct: 208 PVFIAGLAPH---------HPQYEAMHQSLLAL--VADSRPWPQMTGSGSLRPGEWSNDI 256

Query: 112 QRLRERLIISGDLDPSK-------------------GLSVAFDAYVESAVKLFQMRHGLD 152
             LRE L  +G LD +                         +D  +   VK FQ   GL 
Sbjct: 257 GALREILQRTGMLDNTANIVLPGDVVSPSAKKKSKPAARGVYDRQLVEGVKRFQAMQGLG 316

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++  ST + +NV    R   L +N+ R++ LL  K+    ++VNIPA SL   ++G 
Sbjct: 317 ADGVIGQSTRDWLNVSSAQRAGVLALNIQRLR-LLPGKLS-TGIMVNIPAFSLVYYQDGS 374

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R +P YL+ +   
Sbjct: 375 QVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYT 434

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++     +  +    VDW++    N  FR  Q PG  N++   K    S +  Y+HDTP 
Sbjct: 435 VMRGWNSKETIDPYRVDWSTITENNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPN 494

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF   VR  +SGCVRV    +L   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 495 HNLFQKDVRALSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPV 553

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 554 NLYYLTAFVDADGRTQYRTDIYNYD 578


>gi|294677410|ref|YP_003578025.1| peptidoglycan-binding domain 1 protein [Rhodobacter capsulatus SB
           1003]
 gi|294476230|gb|ADE85618.1| peptidoglycan-binding domain 1 protein [Rhodobacter capsulatus SB
           1003]
          Length = 540

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 118/410 (28%), Positives = 189/410 (46%), Gaps = 10/410 (2%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDN-FLARVDMGIDSDIPIISKETIAQT 78
           L     +    +    +D  I             N  LA                  A  
Sbjct: 126 LAWARDISSGALEPKKIDAGIVREIRRPDPQALLNGLLASPAPARFLRDLAPKSPRYAAL 185

Query: 79  EKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
            KA    Q  ++ GGW PE+  + L  G+S   V  LR+RLI  G L   + +S  +D  
Sbjct: 186 VKARLDLQAEIATGGWGPEVAAKRLGPGDSGPGVIALRDRLIRMGYL--RRSVSATYDGD 243

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  AV+ +Q+  G+   G+    TL  +N   + R++ + V L R++ +    +G R++ 
Sbjct: 244 LHRAVQTYQLDQGIKADGVAGEGTLARINRTPEERMKSILVALERLRWMNGLDLGKRHIW 303

Query: 198 VNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           VN+P  +   V++GK+   +  +VG  + DR+TP     +  ++ NP W +PRSI  K+ 
Sbjct: 304 VNLPDFTARIVDDGKMSFETVTVVGMNQGDRRTPEFSDVMEMMVINPSWSVPRSITVKEY 363

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKI 313
           + +++++P      +I ++D +G+ V  E V++ +    NF F  RQ P   NA+   K 
Sbjct: 364 LPMMQRNPG--AAGHIQLVDSRGRAVARESVNFAAYNARNFPFAMRQPPSNGNALGLVKF 421

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F +  N Y+HDTP   LF   VR  + GC+RV    DL   LL         + + V+K
Sbjct: 422 LFPNPYNIYLHDTPSKSLFQKDVRAFSHGCIRVGRPFDLAYALLAAQEADPEGYFKSVLK 481

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           T   T VKL   VPVH VY +A+      I++RDD+YG D      +   
Sbjct: 482 TGAETTVKLRDPVPVHLVYFTAFPNAQGRIEYRDDVYGRDAALFAALDKA 531


>gi|163736471|ref|ZP_02143890.1| Peptidoglycan-binding domain 1 [Phaeobacter gallaeciensis BS107]
 gi|161390341|gb|EDQ14691.1| Peptidoglycan-binding domain 1 [Phaeobacter gallaeciensis BS107]
          Length = 544

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 184/410 (44%), Gaps = 10/410 (2%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           ++     L    +    +D+ I    H      +   +                      
Sbjct: 131 LVGYASDLQTGLLQPRQIDDGIVRKKHQPDFAAYLAGIRDQAPVAYLRSLAPQSAQYQAL 190

Query: 79  EKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
            +     + +   GGW P++  + L  G+S  +V  LR RLI  G L  S      +D  
Sbjct: 191 LREKMRLEALQRAGGWGPQVAAKKLESGDSGPAVIALRNRLIAMGYLPRSAAR--RYDGA 248

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +E AV+ FQ  HGL   G+    TL  +N PV  R++ + V + R + L  ++ G R+VL
Sbjct: 249 LERAVQAFQSDHGLTADGVAGGGTLAEINKPVSARLKSVLVAMERERWLTPER-GTRHVL 307

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           VN    + + ++NG+V   +  ++G+   DR++P     +  ++ NP W +PRSI+ K+ 
Sbjct: 308 VNQTDFTAKIIDNGEVTFVTRSVIGKDNADRRSPEFSDEMEHMVINPSWYVPRSIVTKEY 367

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKI 313
           +  LR +P  +   +I + D +G++V     D++      F F  RQ P + NA+   K 
Sbjct: 368 LPKLRNNPNAV--GHIEITDSRGRKVNRATADFSKYTARTFPFAMRQPPSRKNALGLVKF 425

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +     ++ 
Sbjct: 426 MFPNKYNIYLHDTPQKSLFQREVRAFSHGCIRLAQPFEFAYALLARQTENPKDFFHRILN 485

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           + K T V L  +VPVH +Y +A+       ++R DIYG D      +   
Sbjct: 486 SGKETKVVLDQKVPVHIIYRTAFVTPKGQPEYRRDIYGRDAKVWAALERA 535


>gi|163743284|ref|ZP_02150665.1| peptidoglycan binding protein, putative [Phaeobacter gallaeciensis
           2.10]
 gi|161383472|gb|EDQ07860.1| peptidoglycan binding protein, putative [Phaeobacter gallaeciensis
           2.10]
          Length = 544

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 184/410 (44%), Gaps = 10/410 (2%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           ++     L    +    +D+ I    H      +   +                      
Sbjct: 131 LVGYASDLQTGLLQPRQIDDGIVRKKHQPDFAAYLAGIRDQAPVAYLRSLAPQSAQYQAL 190

Query: 79  EKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
            +     + +   GGW P++  + L  G+S  +V  LR RLI  G L  S      +D  
Sbjct: 191 LREKMRLESLQRAGGWGPQVAAKKLESGDSGPAVIALRNRLIAMGYLPRSAAR--RYDGA 248

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +E AV+ FQ  HGL   G+    TL  +N PV  R++ + V + R + L  ++ G R+VL
Sbjct: 249 LERAVQAFQSDHGLTADGVAGGGTLAEINKPVSARLKSVLVAMERERWLTPER-GTRHVL 307

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           VN    + + ++NG+V   +  ++G+   DR++P     +  ++ NP W +PRSI+ K+ 
Sbjct: 308 VNQTDFTAKIIDNGEVTFVTRSVIGKDNADRRSPEFSDEMEHMVINPSWYVPRSIVTKEY 367

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKI 313
           +  LR +P  +   +I + D +G++V     D++      F F  RQ P + NA+   K 
Sbjct: 368 LPKLRNNPNAV--GHIEITDSRGRKVNRATADFSKYTARTFPFAMRQPPSRKNALGLVKF 425

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +     ++ 
Sbjct: 426 MFPNKYNIYLHDTPQKSLFQREVRAFSHGCIRLAQPFEFAYALLARQTENPKDFFHRILN 485

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           + K T V L  +VPVH +Y +A+       ++R DIYG D      +   
Sbjct: 486 SGKETKVVLDQKVPVHIIYRTAFVTPKGQPEYRRDIYGRDAKVWAALERA 535


>gi|188584494|ref|YP_001927939.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179347992|gb|ACB83404.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 602

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 135/358 (37%), Positives = 195/358 (54%), Gaps = 9/358 (2%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISG 122
           +  +P  + +T   T +A   YQ     GGW  LP       G+S  ++  LR  L ++G
Sbjct: 125 EDPLPTYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKPGDSHPAIPSLRHHLTLTG 184

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  +D  + +AVK FQ RHGL  +G++   TL A+NVP D R RQL+ +  R
Sbjct: 185 DLPADAPPSDRYDPPLVAAVKAFQARHGLPDAGILGRLTLNALNVPADTRQRQLRASAQR 244

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           +        G RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  NP
Sbjct: 245 LMG-SNFGFGERYVTVNIPSATVEAVENGTVTRRYVAVVGSPDKQTPAVETRITDVNLNP 303

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQD 
Sbjct: 304 TWTVPVSVIRNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPTTIDWNTQKAVNYTLRQDS 363

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T  
Sbjct: 364 GLDNSLGQIRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGTEG 423

Query: 363 -------WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                  W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 424 PNGAGSTWGPIEIETAIAAGERRDVKLVKPTPVAFVYLTGYATSDGRVHFRDDIYGLD 481


>gi|307131496|ref|YP_003883512.1| putative carboxypeptidase [Dickeya dadantii 3937]
 gi|306529025|gb|ADM98955.1| predicted carboxypeptidase [Dickeya dadantii 3937]
          Length = 562

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 117/450 (26%), Positives = 204/450 (45%), Gaps = 55/450 (12%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GY++         N  LY    Y +     ++             I +   ++ +   
Sbjct: 132 MLGYMQFVAGVEKNGNSWLYSSVPYKLSMPSAAM-------------IEQWQQAVASGNG 178

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSV 111
             F+A +                A+   A+     +     WP+ +    L  G+ S ++
Sbjct: 179 LAFMASLAPR---------HSQYAKMHDALKTM--LTDNRPWPKLILADSLRPGDESSAL 227

Query: 112 QRLRERLIISGDLDPSKGL-------------SVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             L+E L+ +G L+                   + ++  V  AVK FQ   GL   G++ 
Sbjct: 228 PVLKEILLRTGMLNQDGAAMPLFNEASSGNVSPLRYEGEVVEAVKRFQHSQGLQDDGVIG 287

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             T + +NV   +R   L +N+ R++ + ++      ++VNIP  SL   +NG   L S 
Sbjct: 288 KRTRDWLNVSSQMRATLLALNIQRLRLVPDKV--SSGIVVNIPNYSLSYYQNGAEILSSR 345

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK- 277
           VIVG+  R+TP+++S ++ ++ NP W +P ++ ++D++  + QDP YL+ +   ++ +  
Sbjct: 346 VIVGQPKRKTPLMNSSLSNVVMNPPWNVPTTLTRQDIIPKVIQDPGYLQRHGYTVLSDWT 405

Query: 278 --GKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
              + +    +DW      NF +  RQ PG  N++   K    + +  Y+HDTP   LF 
Sbjct: 406 ESAQPIDPSMIDWPMVSAGNFPYRLRQAPGDSNSLGRYKFNMPNTDAIYLHDTPNHNLFQ 465

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
             +R  +SGCVRV    +L   LL+D   W+   I   ++   TT V +   VPV+F Y+
Sbjct: 466 KDIRALSSGCVRVNKASELAALLLQDA-GWNNARISSTLEQGNTTYVAVRQRVPVNFYYL 524

Query: 394 SAWSPKDSIIQFRDDIYGLDN-VHVGIIPL 422
           +AW   D   QFR DIY  D+ V +G + L
Sbjct: 525 TAWVADDGKPQFRTDIYNYDDTVKIGALAL 554


>gi|253688167|ref|YP_003017357.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251754745|gb|ACT12821.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 576

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 116/455 (25%), Positives = 195/455 (42%), Gaps = 64/455 (14%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N  LY    Y +    L++V +      +    + +Y        
Sbjct: 136 MLGYLQFVSGVERNGNDWLYSSVPYRLQSPALNIVSQ--WQQAVKSGTSAAY-------- 185

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
                     + S  P  S    A+  +A+     +     WP L     L     S  +
Sbjct: 186 ----------VVSLAPQHS--QYAKMHEALKTM--LTDNRPWPSLNLTESLRPEQQSREL 231

Query: 112 QRLRERLIISGDLDPSKGLS-----------------------VAFDAYVESAVKLFQMR 148
             LRE L  +G L  ++ ++                         +   +  AVK FQ  
Sbjct: 232 AVLREILQRTGMLSSTESITLFNENTAATTIPTGQSPLVENGAAIYTGELVEAVKRFQHW 291

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
            GL+  G++   T + +NV   +R   L +N+ R++ L +       ++VNIP  SL   
Sbjct: 292 QGLEDDGVIGKRTRDWLNVSPQMRATLLALNIQRLRLLPDNV--HTGIMVNIPNYSLIYY 349

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           ++G   L S VIVG+  R+TP++ S +  ++ NP W +P ++I++D++  + +DP YL+ 
Sbjct: 350 QDGAERLSSRVIVGQPKRKTPLMSSSLYNVVVNPPWNVPTTLIRQDIIPKVVRDPGYLQR 409

Query: 269 NNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYM 323
           +   ++    ++   +    +DW    P  F +  RQ PG  N++   K    +    Y+
Sbjct: 410 HGYTVLSGWSQDAEVIDPSMIDWQIVSPERFPYRLRQAPGANNSLGRYKFNMPNSEAIYL 469

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I   +    TT V + 
Sbjct: 470 HDTPNHNLFQRDIRALSSGCVRVNKASELASMLLQDA-GWNNSRISSTLDQGNTTFVSMK 528

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
             +PV+  Y++AW  +D   QFR DIY  D+    
Sbjct: 529 HRIPVNLYYLTAWVAEDGRPQFRTDIYNYDDTARA 563


>gi|110804934|ref|YP_688454.1| hypothetical protein SFV_0927 [Shigella flexneri 5 str. 8401]
 gi|110614482|gb|ABF03149.1| putative amidase [Shigella flexneri 5 str. 8401]
          Length = 615

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 130/468 (27%), Positives = 197/468 (42%), Gaps = 82/468 (17%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPIKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   EVDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWEVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S    Y+HDTP   LF    R  +S CVRV    DL   LL+D   W+ 
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSDCVRVNKASDLANMLLQDA-GWND 549

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I +  K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 550 KRISDARKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|227329504|ref|ZP_03833528.1| hypothetical protein PcarcW_20031 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 579

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 114/458 (24%), Positives = 191/458 (41%), Gaps = 67/458 (14%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N  LY    Y +    L++V +      +    + +Y        
Sbjct: 136 MLGYLQFVSGVENSGNDWLYSSVPYRLQSPALNIVSQ--WQQAVKSGTSAAY-------- 185

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
                     + S  P  S    A+  +A+     +     WP L     L     S  +
Sbjct: 186 ----------VVSLAPQHS--QYAKMHEALKTM--LTDNRPWPSLSLAESLRPEQQSREL 231

Query: 112 QRLRERLIISGDLDPSKG--------------------------LSVAFDAYVESAVKLF 145
             LRE L  +G L  ++                               +   +  AVK F
Sbjct: 232 AVLREILQRTGMLSSTESITLFNENTAATTVSTGQVPLVDGSGTSDDRYTGELVDAVKRF 291

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q   GL+  G++   T + +NV   +R   L +N+ R++ L +       ++VNIP  SL
Sbjct: 292 QHWQGLEDDGVIGKRTRDWLNVSPQMRATLLALNIQRLRLLPDNV--HTGIMVNIPNYSL 349

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
              ++G   L S VIVG+  R+TP++ S +  ++ NP W +P ++ ++D++  + +DP Y
Sbjct: 350 IYYQDGAERLSSRVIVGQPKRKTPLMSSSLYNVVVNPPWNVPTTLTRQDIIPKVVRDPGY 409

Query: 266 LKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           L+ +   ++    ++   +    +DW       F +  RQ PG  N++   K    +   
Sbjct: 410 LQRHGYTVLSGWSQDAEAIDPSMIDWQMVSAERFPYRLRQAPGANNSLGRYKFNMPNSEA 469

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I   +    TT V
Sbjct: 470 IYLHDTPNHNLFQRDIRALSSGCVRVNKASELASMLLQDA-GWNNSRISSTLDQGNTTFV 528

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +   +PV+  Y++AW  +D   QFR DIY  D+    
Sbjct: 529 SMKHRIPVNLYYLTAWVAEDGRPQFRTDIYNYDDTARA 566


>gi|242239070|ref|YP_002987251.1| hypothetical protein Dd703_1632 [Dickeya dadantii Ech703]
 gi|242131127|gb|ACS85429.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
          Length = 564

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 118/442 (26%), Positives = 198/442 (44%), Gaps = 54/442 (12%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           ++GY++         +  LY    Y +     S+V +      + E              
Sbjct: 134 LLGYMQFVAGVEKNGSHWLYGNVSYTLAAPPSSMVAQ--WQQAIHE-------------- 177

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
                     + S  P  S    A+  +A+     +     WP L +   L  G+ S ++
Sbjct: 178 ----GSSAAFVASLAPRHS--QYAKMHQALKDM--LTDNRPWPRLVLGETLRPGDESPAL 229

Query: 112 QRLRERLIISGDLD-------------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             LR+ L+ +G L+             PS   ++ +D  +  AVK FQ   GL   G + 
Sbjct: 230 PVLRDILLRTGALNQGNVSMPLFNEAQPSGPEALRYDGELVEAVKRFQRLQGLQDDGSIG 289

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             T + +NV    R   L +N+ R++ + +       ++VNIP  SL    NG V L S 
Sbjct: 290 KRTRDWLNVSSQTRATLLALNIQRLRLVPDNV--NTGIMVNIPNYSLSYYLNGSVILSSR 347

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           VIVG+  R+TP++ S ++ ++ NP W +P ++ ++D++  + QDP YL+ +   ++    
Sbjct: 348 VIVGQPKRKTPLMSSSLSNVVMNPPWNVPTTLTRQDIIPKVIQDPAYLQKHGYVLLSGWS 407

Query: 279 ---KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
              +++    +DW      NF +  RQ PG  N++   K    + +  Y+HDTP   LF 
Sbjct: 408 EDAQQIDPAMIDWPMVSANNFPYRLRQAPGDNNSLGRYKFNMPNTDAIYLHDTPNHNLFQ 467

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
             +R  +SGCVRV    +L   LL+D   W+   I   ++   TT V +   +PV+F Y+
Sbjct: 468 KDIRALSSGCVRVNKASELAALLLQDA-GWNNARISSTLEQGNTTYVSIRQRIPVNFYYL 526

Query: 394 SAWSPKDSIIQFRDDIYGLDNV 415
           +AW   D   QFR DIY  D+ 
Sbjct: 527 TAWVADDGKPQFRTDIYNYDDT 548


>gi|154253343|ref|YP_001414167.1| peptidoglycan-binding domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157293|gb|ABS64510.1| Peptidoglycan-binding domain 1 protein [Parvibaculum
           lavamentivorans DS-1]
          Length = 399

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 142/377 (37%), Positives = 207/377 (54%), Gaps = 7/377 (1%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-L 102
           +           +A       S  P++S ET+     AI  Y+ I + GGW  +     L
Sbjct: 15  WVDPWQAETGAAVAEAPPFERSSAPVLSAETLLPLTHAIETYRVIANLGGWGYVASGERL 74

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG     V ++RERL  +GDL      +  +DA V  AV+ +Q+R+GL+P G+V   T+
Sbjct: 75  ELGVRDPRVVQVRERLTATGDLTVPAQDAELYDANVYEAVRRYQVRNGLEPDGIVGRRTI 134

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            AMNV V  RIRQL++NL R+   +   +  RYV VNI    +EAV NG V  R  VIVG
Sbjct: 135 AAMNVRVQTRIRQLELNLRRLSAAVPA-LPDRYVFVNIAGQEVEAVNNGIVEFREPVIVG 193

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---K 279
           + DRQTP + S +N I FNPYW +P+SI   DM+  +R +P YL+   I ++       +
Sbjct: 194 KQDRQTPEITSEVNSITFNPYWYVPKSIAMADMLPKIRANPDYLQRQGIRVLQGWDTNIR 253

Query: 280 EVFVEEVDWNSPEPPN-FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           E+    +DW++P     + FRQDPG  N++ S KI F +    ++HDTP   LF    R 
Sbjct: 254 ELNPRNIDWSNPRINEAYYFRQDPGPGNSLGSLKINFPNNQAIFLHDTPTKTLFGRQERN 313

Query: 339 ETSGCVRVRNIIDLDVWLLK-DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
            +SGCVRV+N+  L  WL++ D+  W    +   V +R+   V LAT VP++ +Y++AW 
Sbjct: 314 FSSGCVRVQNVRGLVSWLMQGDSSEWDAARVARSVDSRQYRNVSLATPVPIYLMYLTAWV 373

Query: 398 PKDSIIQFRDDIYGLDN 414
             + I+ FRDD+Y  D 
Sbjct: 374 TPEGIVNFRDDVYDRDG 390


>gi|251789271|ref|YP_003003992.1| hypothetical protein Dd1591_1660 [Dickeya zeae Ech1591]
 gi|247537892|gb|ACT06513.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
          Length = 563

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 118/451 (26%), Positives = 200/451 (44%), Gaps = 56/451 (12%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+            LY    Y +     ++             I +   +I +   
Sbjct: 132 MLGYLQFVAGVEKNGGNWLYGSVPYKLAAPSAAM-------------IEQWQQAITSGNG 178

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                 +   A+     +     WP+L     L  G+ S ++
Sbjct: 179 AAFIASLAPR---------HSQYEKMHTALKNM--LTDNRPWPKLVLADSLRPGDESNAL 227

Query: 112 QRLRERLIISGDLDPS--------------KGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             L+E L+ +G L                    ++ +D  +  AVK FQ   GL   G++
Sbjct: 228 PVLQEILLRTGMLSQDSAAMPLFNDATAAGNTAALRYDGEMVEAVKRFQHSQGLLDDGVI 287

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
              T + +NV   +R   L +N+ R++ + ++      ++VNIP  SL   +NG   L S
Sbjct: 288 GKRTRDWLNVSSQMRAALLALNIQRLRLVPDKV--SSGIVVNIPNYSLSYYQNGAEILSS 345

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            VIVG+  R+TP++ S ++ ++ NP W +P ++ ++D++  + QDP YL+ +   ++   
Sbjct: 346 RVIVGQPKRKTPLMSSSLSNVVMNPPWNVPTTLTRQDIIPKVIQDPGYLQRHGYTVLSGW 405

Query: 278 ---GKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
               + +    +DW      NF +  RQ PG  N++   K    + ++ Y+HDTP   LF
Sbjct: 406 TDSAQPIDPSMIDWPMMSAGNFPYRLRQAPGDSNSLGRYKFNMPNTDSIYLHDTPNHNLF 465

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
              +R  +SGCVRV    +L   LL+D   W+   I   ++   TT V +   VPV+F Y
Sbjct: 466 QKDIRALSSGCVRVNKASELAALLLQDA-GWNNARISSTLEQGNTTYVAVRQRVPVNFYY 524

Query: 393 ISAWSPKDSIIQFRDDIYGLDN-VHVGIIPL 422
           ++AW   D   QFR DIY  D+ V  G + L
Sbjct: 525 LTAWVADDGKPQFRTDIYNYDDTVKTGTLAL 555


>gi|271500170|ref|YP_003333195.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
 gi|270343725|gb|ACZ76490.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
          Length = 567

 Score =  421 bits (1083), Expect = e-116,   Method: Composition-based stats.
 Identities = 115/452 (25%), Positives = 205/452 (45%), Gaps = 55/452 (12%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GY++         N  LY    Y +    +++             + +   ++ +   
Sbjct: 137 MLGYMQFVAGVEKNGNSWLYGSVPYKLALPPVAM-------------MEQWQRAMASGNG 183

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A+   A+     ++ +  WP+L     L  G+ S  +
Sbjct: 184 AAFIASLAPH---------HSQYAKMHVALKDM--LMDKRPWPKLMLADSLRPGDESNGL 232

Query: 112 QRLRERLIISGDLD-------------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             LRE L+ +G L              P     + ++  +  AVK FQ   GL   G++ 
Sbjct: 233 PVLREILLRTGMLSQNSAAMPLFNEASPGNASPLRYEGELVEAVKRFQHSQGLQDDGVIG 292

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             T + +NV   +R   L +N+ R++ + +       ++VNIP  SL   ++G   L S 
Sbjct: 293 KRTRDWLNVSSQMRATLLALNIQRLRLVPDNVNSG--IMVNIPNYSLIYYQHGAEILSSR 350

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK- 277
           VIVG+  R+TP++ + ++ ++ NP W +P ++ ++D++  + QDP YL+ +   ++ +  
Sbjct: 351 VIVGQPKRKTPLMSTSLSNVVMNPPWNVPTTLTRQDIIPKVIQDPGYLQRHGYTVLSDWT 410

Query: 278 --GKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
              + +    +DW      NF +  RQ PG  N++   K    + ++ Y+HDTP   LF 
Sbjct: 411 ESAQPIDPSMIDWPMVSASNFPYRLRQAPGDSNSLGRYKFNIPNTDSIYLHDTPNHALFQ 470

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
             +R  +SGCVRV    +L   LL+D   W+   I   ++   TT V +   +PV+F Y+
Sbjct: 471 KDIRALSSGCVRVNKASELAALLLQDA-GWNNARISSTLEQGNTTYVAVRQRIPVNFYYL 529

Query: 394 SAWSPKDSIIQFRDDIYGLDN-VHVGIIPLPE 424
           +AW   D   QFR DIY  D+ V  G + L +
Sbjct: 530 TAWVADDGKPQFRTDIYNYDDTVKTGALALSK 561


>gi|193212014|ref|YP_001997967.1| peptidoglycan-binding domain 1 protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085491|gb|ACF10767.1| Peptidoglycan-binding domain 1 protein [Chlorobaculum parvum NCIB
           8327]
          Length = 583

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 122/406 (30%), Positives = 201/406 (49%), Gaps = 32/406 (7%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              ++++ +F   +A +           S        K +A Y+ + + GGW  +P  P 
Sbjct: 174 LKSAVMDAKFPEMIASLRP---------STPEYRLLRKGLAKYRKVAAAGGWKPVPAGP- 223

Query: 103 HLGNS---SVSVQRLRERLIISGDL---------------DPSKGLSVAFDAYVESAVKL 144
            +G+       +  +R+RL+++GDL                 +   +  + A +  AVK 
Sbjct: 224 RIGDVGQIDERMPLIRKRLVVTGDLIEDGLTISAPANSADSTAARQAFVYTAELFDAVKA 283

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ RHGL+  G++ + T  AM VPV+  I Q+++NL R +      +G  YV+VNIP+ S
Sbjct: 284 FQERHGLEVDGIIGTETAGAMAVPVEEWIDQIRINLERYR-WYSSSLGSTYVMVNIPSFS 342

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           +E V +  V  +S VIVG+ + QTP+  + I  ++FNP WVIP  I+ K+ +  ++++  
Sbjct: 343 VEFVRDDSVRWKSRVIVGKPNLQTPVFKAEIQSVIFNPRWVIPSGILAKEALPAIKKNLD 402

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTY 322
           YL  + + +++ +GK V    V+W + +   F +R  Q  G   A+   K    +R   Y
Sbjct: 403 YLSRHQLTVVNNQGKPVDPSSVNWAAYQGRGFPYRLVQASGDDGALGRIKFNMPNRFTVY 462

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           MHDTP   LF    R  + GCVRV+N  +L V L  D   W    IE ++ T KT  + L
Sbjct: 463 MHDTPTKPLFERSYRAFSHGCVRVQNPNELGVLLFNDPVKWDMNRIEAMIDTGKTRTINL 522

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPI 428
              +PV+F+Y +A+   D+ I FR D+Y  D      +    +  I
Sbjct: 523 PERIPVYFMYQTAFPDGDN-IDFRYDVYDRDPDLQKALDSTRERVI 567


>gi|317491480|ref|ZP_07949916.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316921027|gb|EFV42350.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 608

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 124/463 (26%), Positives = 190/463 (41%), Gaps = 67/463 (14%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIIS 71
               YL    G+S  +     S +   I E   ++VN+ +      R+   + S  P  S
Sbjct: 136 AMLGYLQFVSGVSATKGSWLYSSVPYAIAEPPATLVNNWQLSVRDGRLATFVQSLAP--S 193

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLD----- 125
               A   KA+     +     WP +   P L  G+ S  +  LRE L  +G L      
Sbjct: 194 HPQYAAMHKALKDL--LADTRPWPTVNDGPSLKPGDLSPDMPALREVLQRTGMLTEKGNV 251

Query: 126 ------------------------------------------------PSKGLSVAFDAY 137
                                                           P       +   
Sbjct: 252 KSPTPVPEAQPLQSPASQEPNAVISPSTTAVSELTQQPTPEATPAKTMPVSATDNRYTPE 311

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L  +      ++
Sbjct: 312 LVEAVKRFQQWQGLASDGVIGKRTREWLNVSPQTRATLLALNIQRLRILPGEV--DTGIM 369

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNIP  SL   +NG   L S VIVGR  R+TP+++S +N ++ NP W +P ++I++D++ 
Sbjct: 370 VNIPNYSLIYYQNGTEVLTSRVIVGRPTRKTPLMNSELNNVVVNPPWNVPTTLIREDIVP 429

Query: 258 LLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTK 312
              +DP Y + +   +      +   V    +DW S  P NF +R  Q PG  N++   K
Sbjct: 430 KAMRDPGYFERHGYRLFSGWSNDAEVVDPYMIDWASVSPRNFPYRIQQAPGVNNSLGRYK 489

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
               S++  Y+HDTP   LF   +R  +SGCVRV     L   LL+D   W+   +   +
Sbjct: 490 FNMPSQDAIYLHDTPNHGLFEKDIRALSSGCVRVNKASTLANMLLQDA-GWNDARVSSAL 548

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           K   T  V +   +PV   Y++AW  +D   QFR DIY  D+ 
Sbjct: 549 KEGNTKYVPIRHRIPVRLYYLTAWVSEDGKPQFRTDIYNYDDT 591


>gi|227111943|ref|ZP_03825599.1| hypothetical protein PcarbP_03208 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 578

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 114/457 (24%), Positives = 193/457 (42%), Gaps = 66/457 (14%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N  LY    Y +    L++V +      +    + +Y        
Sbjct: 136 MLGYLQFVSGVERSGNDWLYSSVPYRLQSPTLNVVSQ--WQQAVKSGTSAAY-------- 185

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
                     + S  P  S    A+  +A+     +     WP L     L     S  +
Sbjct: 186 ----------VVSLAPQHS--QYAKMHEALKTM--LTDNRPWPSLNLAESLRPEQQSREL 231

Query: 112 QRLRERLIISGDLDPSKGLS-------------------------VAFDAYVESAVKLFQ 146
             LRE L  +G L  ++ ++                           +   +  AVK FQ
Sbjct: 232 AVLREILQRTGMLSSTESITLFNENTAATTVSTGQAPLVEGGAIDDRYTGELVDAVKRFQ 291

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
              GL+  G++   T + +NV   +R   L +N+ R++ L +       ++VNIP  SL 
Sbjct: 292 HWQGLEDDGVIGKRTRDWLNVSPQMRATLLALNIQRLRLLPDNV--HTGIMVNIPNYSLI 349

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
             ++G   L S VIVG+  R+TP++ S +  ++ NP W +P ++ ++D++  + +DP YL
Sbjct: 350 YYQDGAERLSSRVIVGQPKRKTPLMSSSLYNVVVNPPWNVPTTLTRQDIIPKVVRDPGYL 409

Query: 267 KDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNT 321
           + +   ++    ++   +    +DW       F +  RQ PG  N++   K    +    
Sbjct: 410 QRHGYTVLSGWSQDAEAIDPSMIDWPMVSAERFPYRLRQAPGANNSLGRYKFNMPNSEAI 469

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
           Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I   +    TT V 
Sbjct: 470 YLHDTPNHNLFQRDIRALSSGCVRVNKASELASMLLQDA-GWNNSRISSTLDQGNTTFVS 528

Query: 382 LATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           +   +PV+  Y++AW  +D   QFR DIY  D+    
Sbjct: 529 MKHRIPVNLYYLTAWVAEDGRPQFRTDIYNYDDTARA 565


>gi|84684826|ref|ZP_01012726.1| peptidoglycan binding protein, putative [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667161|gb|EAQ13631.1| peptidoglycan binding protein, putative [Rhodobacterales bacterium
           HTCC2654]
          Length = 539

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 108/415 (26%), Positives = 186/415 (44%), Gaps = 11/415 (2%)

Query: 14  FFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE 73
               L L     +    +  + +D+ I                ++              E
Sbjct: 122 DLSKLFLTYAKYIQTGILTPAAVDDGIKREVPLKDRTELLKAFSQAQPAPFLRTLPPKSE 181

Query: 74  TIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
             A+  +     + + + GGW P +    L  G+   +V +LR RL+  G +D S   + 
Sbjct: 182 EYARLMREKLRLERVRAEGGWGPTVQAGSLRPGDQGQAVIQLRNRLVTMGYMDRSA--TQ 239

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +D  ++ AV+ FQ  HGL   G+    T++A+N PV+ R+ ++ V + R +  +  + G
Sbjct: 240 TYDENIQRAVQRFQTNHGLTADGVAGGDTVKAINTPVEDRLERIIVAMERER-WMNIERG 298

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSI 250
            RYV VN+   +   V+ GKV   +  +VG+     +TP     +  ++ NP W +PRSI
Sbjct: 299 DRYVWVNLTTFTARVVDGGKVTFETRSVVGQNLSTHRTPEFSDMMEHMVINPSWYVPRSI 358

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAM 308
           I  + +  LR +       ++ + D +G+ V     D++     NF F  RQ PG  NA+
Sbjct: 359 IVNEYLPALRANSG--AAGHLLITDARGRTVSRAT-DFSQYSARNFPFDMRQPPGPGNAL 415

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F ++ N Y+HDTP   LF   VR  + GCVR++   D    +L           
Sbjct: 416 GYVKFMFPNQYNIYLHDTPSKSLFGREVRTFSHGCVRLQQPFDFAYTMLAPQEADPEGFF 475

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           + +++T + T V+L   VPVH VY +A++     + +R+D+YG D      +   
Sbjct: 476 QSILRTGQETKVELDEPVPVHLVYRTAFTDTRGEMNYRNDMYGRDARIWAALQAA 530


>gi|90022535|ref|YP_528362.1| hypothetical protein Sde_2893 [Saccharophagus degradans 2-40]
 gi|89952135|gb|ABD82150.1| Peptidoglycan-binding domain 1 [Saccharophagus degradans 2-40]
          Length = 563

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 114/375 (30%), Positives = 183/375 (48%), Gaps = 16/375 (4%)

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDIL---------SRGGWPELPIRP-LHLGNSSVS 110
             + S++PI   + +         Y  ++             W  L + P +  G +   
Sbjct: 191 TKVASNVPI--ADIVQSLRPRQPRYARLVKTLAWLNSTQAPDWEPLALSPAIKKGMADTR 248

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           +  + ERL   GDL  S+     ++  +  AV  FQ RHGL+P G+V  +TL A+NV   
Sbjct: 249 LSPIAERLRFWGDLSESEETFTHYEGELMEAVTRFQRRHGLEPDGVVGKNTLLALNVSPV 308

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            R   + VNL R +  L+Q MG  +++VNI    L   ++ ++ ++  VIVGR  R+TP+
Sbjct: 309 QRANDVVVNLERWR-WLDQNMGDYFIVVNIANFDLRVYKSNELVMQKPVIVGRNYRKTPV 367

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWN 289
              +I  ++FNP W +P+ +  +D +  +++D  YL+     +    +   V   +V+W+
Sbjct: 368 FSDKIRFLVFNPTWTVPQKLAVQDKLPEIKKDISYLEKYGFTLYALGENTVVNPADVEWD 427

Query: 290 SPEPP-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +   Q PG +NA+   K  F +  + Y+HDTP   LF+   R  +SGC+RV +
Sbjct: 428 KLHKRFPYRMVQAPGPLNALGQVKFMFPNAYDVYLHDTPSRELFSKTERAFSSGCIRVSD 487

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
            I+L   LL+         I EV+ + KTT V L T VPVH  Y +AW      +QFR+D
Sbjct: 488 PIELASKLLEPN-GMGIDQINEVLSSAKTTTVNLKTPVPVHIEYWTAWVDSSGKLQFRND 546

Query: 409 IYGLDNVHVGIIPLP 423
           IY  D      + LP
Sbjct: 547 IYERDKPLFSALTLP 561


>gi|226330682|ref|ZP_03806200.1| hypothetical protein PROPEN_04602 [Proteus penneri ATCC 35198]
 gi|225201477|gb|EEG83831.1| hypothetical protein PROPEN_04602 [Proteus penneri ATCC 35198]
          Length = 575

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 121/431 (28%), Positives = 200/431 (46%), Gaps = 30/431 (6%)

Query: 2   VGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDM 61
           +GY+   + +      L+      ++  P  +SV+     E   +I N+   +F      
Sbjct: 155 LGYISFVEQVNKSGTSLLYRSATQVLSAPSDSSVI-----ELQQNIQNNTLGSF------ 203

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLII 120
            + S  P  S    A  ++ +   + + S   WPE+     L    SS  V  LR+ L  
Sbjct: 204 -VISYAP--SHPYYALMKEELR--KQLHSSVVWPEMKGTTSLKPNQSSQEVVPLRQILRN 258

Query: 121 SGDLDP-----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
              +        +  +  +DA + +AVKLFQ  HGL+P G++   T   +N+    R   
Sbjct: 259 LKLIPELAVNEQEIATTVYDASLVAAVKLFQTAHGLEPDGIIGRQTRTWLNITPAQRASI 318

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           + +N+ R++  L   +G   + VNIP  SL    N ++ L S VIVGR DR+TPI+ S +
Sbjct: 319 MALNIQRLR--LTPAIGDTGIWVNIPDFSLYFYANNELILDSKVIVGRPDRKTPIMSSAL 376

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPE 292
           N ++ NP W +P S+ +KD++   + DP Y       +    G +   +   ++DW +  
Sbjct: 377 NNVVVNPPWNVPTSMTRKDIVPRGKADPSYFSRKGYTIYSGWGNDAYPINPYDIDWQNVS 436

Query: 293 PPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
             NF +R  Q PG  N++   K    + +  Y+HDTP   LF+  +R  +SGC+RV    
Sbjct: 437 ANNFPYRIWQAPGPTNSLGRYKFNMPNSDAIYLHDTPNHSLFSKNMRAISSGCIRVNKAS 496

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           +L   LL D   W +  I+  +K   T    +   +PV+  Y +AW  +++  Q+R DIY
Sbjct: 497 ELASILLGDA-GWKQDRIDAALKRGSTQYAPIPERIPVYLYYQTAWVAQENAPQYRADIY 555

Query: 411 GLDNVHVGIIP 421
           G D       P
Sbjct: 556 GYDKSISNAEP 566


>gi|110679848|ref|YP_682855.1| peptidoglycan binding domain-containing protein [Roseobacter
           denitrificans OCh 114]
 gi|109455964|gb|ABG32169.1| peptidoglycan binding domain protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 537

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 107/377 (28%), Positives = 182/377 (48%), Gaps = 11/377 (2%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVS 110
             NF      G    +P  + E  A  ++ +   + ++++GGW P +  + L  G+   S
Sbjct: 158 LTNFAKSSPKGFFKALPPQTGEYNALMKQKLVL-EGLVAKGGWGPTVKAKKLEPGDQGAS 216

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  LR+RLI  G L  S   +  +DA + +AV  FQ  HGL   G+V   TL  +N  V 
Sbjct: 217 VVALRDRLIRMGYLKRSAAST--YDAAMTAAVVRFQADHGLAQDGIVGRGTLAEINTSVR 274

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQT 228
            R++ + V + R +  + ++ G R++ VN+   + + ++ GKV   +  ++G  D  RQ+
Sbjct: 275 KRLQAVIVAMERER-WVNKERGTRHIEVNLTDFTAKIIDKGKVTFSTRSVIGARDAKRQS 333

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P     +  ++ NP W +PRSI   + +  L+QDP  +  N++ + D  G+++    VD+
Sbjct: 334 PEFSDVMEFMVINPSWFVPRSIATGEYLPELQQDPNAV--NHLIITDRSGRQIDRANVDF 391

Query: 289 NSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                  F +  RQ P + NA+   K  F ++ N Y+HDTP   LF    R  + GC+R+
Sbjct: 392 TKYTERTFPYAMRQPPSRSNALGLVKFMFPNKYNIYLHDTPAKNLFGRETRAYSHGCIRL 451

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
            +  +    LL           ++ + T K T + L   VPVH +Y +A +     IQ+R
Sbjct: 452 ADPFEFAYALLAKQSGDPEGLFQKTLATGKETQLNLKKPVPVHIIYRTAVADSKGRIQYR 511

Query: 407 DDIYGLDNVHVGIIPLP 423
            D+YG D      +   
Sbjct: 512 RDVYGRDGRIWEALSQA 528


>gi|240141625|ref|YP_002966105.1| putative peptidoglycan-binding protein (N-terminal domain)
           [Methylobacterium extorquens AM1]
 gi|240011602|gb|ACS42828.1| putative peptidoglycan-binding protein (N-terminal domain)
           [Methylobacterium extorquens AM1]
          Length = 586

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 136/358 (37%), Positives = 195/358 (54%), Gaps = 9/358 (2%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISG 122
           +  +P  + +T   T +A   YQ     GGW  LP       G+S  ++  LR  L ++G
Sbjct: 124 EDPLPSYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKPGDSHAAIPSLRHHLTLTG 183

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R
Sbjct: 184 DLPADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQR 243

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           +        G RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  NP
Sbjct: 244 LMG-SNFGFGERYVTVNIPSATVEAVENGAVTRRYVAVVGSPDKQTPAVETRITDVNLNP 302

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQD 
Sbjct: 303 TWTVPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQDS 362

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T  
Sbjct: 363 GLDNSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGTEG 422

Query: 363 -------WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                  W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 423 PNGPGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 480


>gi|254564132|ref|YP_003071227.1| peptidoglycan-binding protein [Methylobacterium extorquens DM4]
 gi|254271410|emb|CAX27423.1| putative peptidoglycan-binding protein (N-terminal domain)
           [Methylobacterium extorquens DM4]
          Length = 586

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 136/358 (37%), Positives = 195/358 (54%), Gaps = 9/358 (2%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISG 122
           +  +P  + +T   T +A   YQ     GGW  LP       G+S  ++  LR  L ++G
Sbjct: 124 EDPLPSYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKPGDSHAAIPSLRHHLTLTG 183

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R
Sbjct: 184 DLPADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQR 243

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           +        G RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  NP
Sbjct: 244 LMG-SSFGFGERYVTVNIPSATVEAVENGTVTRRYVAVVGSPDKQTPAVETRITDVNLNP 302

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQD 
Sbjct: 303 TWTVPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQDS 362

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T  
Sbjct: 363 GLDNSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGTEG 422

Query: 363 -------WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                  W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 423 PNGPGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 480


>gi|50121470|ref|YP_050637.1| hypothetical protein ECA2546 [Pectobacterium atrosepticum SCRI1043]
 gi|49611996|emb|CAG75445.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
          Length = 580

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 116/459 (25%), Positives = 188/459 (40%), Gaps = 68/459 (14%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N  LY    Y +     ++V +      +                
Sbjct: 136 MLGYLQFVSGVERSGNDWLYSNVPYRLQSPAANIVAQ--WQQAVK--------------- 178

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
              L      + S  P  S    A+  +A+     +     WP L     L     S  +
Sbjct: 179 ---LGTSAAYVLSLAPQHS--QYAKMHEALKTM--LTDNRPWPSLNLTESLRPEQQSQGL 231

Query: 112 QRLRERLIISGDL---------------------------DPSKGLSVAFDAYVESAVKL 144
             LRE L  +G L                           D +      +   +  AVK 
Sbjct: 232 TVLREILQRTGMLSSTESITLFNENTAATTTSLTGQAPVVDGTTNADDRYTGELVDAVKR 291

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ   GL+  G++   T + +NV   +R   L +N+ R++ L         ++VNIP  S
Sbjct: 292 FQHWQGLEDDGVIGKRTRDWLNVSPQMRATLLALNIQRLRLLPGNV--HTGIMVNIPNYS 349

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L   ++G   L S VIVG+  R+TP++ S +  ++ NP W +P ++I++D++  + +DP 
Sbjct: 350 LIYYQDGAERLSSRVIVGQPKRKTPLMSSSLYNVVVNPPWNVPTTLIRQDIIPKVVRDPG 409

Query: 265 YLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRN 319
           YL  +   ++    ++   +    +DW    P  F +  RQ PG  N++   K    +  
Sbjct: 410 YLARHGYTVLSGWSQDAEVIDPSMIDWQVVSPERFPYRLRQAPGANNSLGRYKFNMPNSE 469

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I   +    TT 
Sbjct: 470 AIYLHDTPNHNLFQRDIRALSSGCVRVNKASELASMLLQDA-GWNNNRISSTLDQGNTTF 528

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           V +   +PV+  Y++AW  +D   QFR DIY  D+    
Sbjct: 529 VSMKHRIPVNLYYLTAWVAEDGRPQFRTDIYNYDDTARA 567


>gi|261821332|ref|YP_003259438.1| hypothetical protein Pecwa_2052 [Pectobacterium wasabiae WPP163]
 gi|261605345|gb|ACX87831.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
          Length = 575

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 114/466 (24%), Positives = 195/466 (41%), Gaps = 69/466 (14%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N  LY    Y +    +++V +      ++   + +Y        
Sbjct: 131 MLGYLQFVSGVERNGNNWLYSSVPYRLQSPAVNIVSQ--WQQAVNSGTSAAY-------- 180

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
                     + S  P  S    A+  +A+     +     WP L     L     S  +
Sbjct: 181 ----------VASLTP--SHSQYAKMHEALKTM--LTDNRPWPSLNLAESLRPEQQSREL 226

Query: 112 QRLRERLIISGDLDPS---------------------------KGLSVAFDAYVESAVKL 144
             LRE L  +G L  +                                 +   +  AVK 
Sbjct: 227 VALREILQRTGMLSLTESITLFNENVSATTTPLTEQTPVDNGVANADDRYSGDLVEAVKR 286

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ   GL+  G++   T + +NV   +R   L +N+ R++ + +       ++VNIP  S
Sbjct: 287 FQHWQGLEGDGVIGKRTRDWLNVSPQMRATLLALNIQRLRLVPDNV--HTGIMVNIPNYS 344

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L   ++G   L S VIVG+  R+TP++ S +  ++ NP W +P ++ ++D++  + +DP 
Sbjct: 345 LIYYQDGAERLSSRVIVGQPKRKTPLMSSSLYNVVVNPPWNVPTTLTRQDIIPKVVRDPG 404

Query: 265 YLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRN 319
           YL+ +   ++    ++   +    ++W       F +  RQ PG  N++   K    +  
Sbjct: 405 YLQRHGYTVLSGWSQDAEAIDPSMIEWQGVSAERFPYRLRQAPGANNSLGRYKFNMPNSE 464

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I   +    TT 
Sbjct: 465 AIYLHDTPNHNLFQRDIRALSSGCVRVNKASELASMLLQDA-GWNNSRISSTLDQGNTTF 523

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGIIPLPE 424
           V +   +PV+  Y++AW  +D   QFR DIY  D+    G   LP+
Sbjct: 524 VSMKHRIPVNLYYLTAWVAEDGRPQFRTDIYNYDDTARAGTKVLPK 569


>gi|152993980|ref|YP_001359701.1| hypothetical protein SUN_2408 [Sulfurovum sp. NBC37-1]
 gi|151425841|dbj|BAF73344.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 558

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 117/357 (32%), Positives = 185/357 (51%), Gaps = 10/357 (2%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDP--SKGLS 131
                K +  Y  I   GGWP + I+  L  G+ + +V  LRERL+I+GD  P      S
Sbjct: 202 YRALRKYLDKYIAIKENGGWPTVNIKGVLRPGHRNPAVPDLRERLLITGDYIPCDESDES 261

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +D  ++ AV  FQ R+GL   G++  +TL+A+N  VD RI  +++NL RIK  L ++ 
Sbjct: 262 DLYDNCLKKAVIRFQKRNGLSAKGVIGKNTLKALNQTVDERITIIKINLDRIK-WLHERP 320

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
             R++++NIP   L    NGK+ +   VIVG+    TPI  +R+  ++ NPYW +P+SII
Sbjct: 321 DNRHIIINIPDYRLYYEVNGKLKMTMKVIVGKRKNPTPIFSNRVKSVVLNPYWNVPKSII 380

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPN---FIFRQDPGKI 305
           QK+M+  L ++P  +    I +    GK   +V    V+W          + F Q PG  
Sbjct: 381 QKEMIPKLLRNPHAMAGQGIDIYTGWGKDAKKVSGGSVNWAQYRYSKTVPYRFAQRPGNR 440

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NA+   K  F ++ + YMHDTP   LF    R  + GC+R+     +   +    P+   
Sbjct: 441 NALGRIKFLFPNQFHVYMHDTPTKYLFKRDKRSYSHGCIRLEKPKLMMETIASFNPSLEL 500

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
               +++K++K T   L   +P+  VY++AW   D  +QFRDD+Y  D + +  +  
Sbjct: 501 DKAYKILKSKKNTYFSLENTIPIDVVYLTAWVDYDGKLQFRDDVYKYDELMIASVRR 557


>gi|163854165|ref|YP_001642208.1| peptidoglycan binding domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163665770|gb|ABY33137.1| Peptidoglycan-binding domain 1 protein [Methylobacterium extorquens
           PA1]
          Length = 590

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 136/358 (37%), Positives = 195/358 (54%), Gaps = 9/358 (2%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISG 122
           +  +P  + +T   T +A   YQ     GGW  LP       G+S  ++  LR  L ++G
Sbjct: 128 EDPLPSYTAQTFVDTMRAAERYQVYAEAGGWKPLPADFAPKPGDSHAAIPSLRHHLTLTG 187

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R
Sbjct: 188 DLPADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQR 247

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           +        G RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  NP
Sbjct: 248 LMG-SSFGFGERYVTVNIPSATVEAVENGAVTRRYVAVVGSPDKQTPAVETRITDVNLNP 306

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQD 
Sbjct: 307 TWTVPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQDS 366

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T  
Sbjct: 367 GLDNSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGTEG 426

Query: 363 -------WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                  W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 427 PNGPGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 484


>gi|218533110|ref|YP_002423926.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218525413|gb|ACK85998.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 586

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 136/358 (37%), Positives = 195/358 (54%), Gaps = 9/358 (2%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISG 122
           +  +P  + +T   T +A   YQ     GGW  LP       G+S  ++  LR  L ++G
Sbjct: 124 EDPLPSYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKPGDSHAAIPSLRHHLTLTG 183

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R
Sbjct: 184 DLPADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQR 243

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           +        G RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  NP
Sbjct: 244 LMG-SSFCFGERYVTVNIPSATVEAVENGAVTRRYVAVVGSPDKQTPAVETRITDVNLNP 302

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQD 
Sbjct: 303 TWTVPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQDS 362

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T  
Sbjct: 363 GLDNSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGTEG 422

Query: 363 -------WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                  W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 423 PNGPGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 480


>gi|163731883|ref|ZP_02139330.1| peptidoglycan binding domain protein, putative [Roseobacter
           litoralis Och 149]
 gi|161395337|gb|EDQ19659.1| peptidoglycan binding domain protein, putative [Roseobacter
           litoralis Och 149]
          Length = 537

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 103/377 (27%), Positives = 182/377 (48%), Gaps = 11/377 (2%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVS 110
             NF      G    +P  + E  A  ++ +   + ++++GGW P +  + L  G+S  S
Sbjct: 158 LTNFAKSSPKGFFKALPPQTGEYNALRKQKLVL-EGLIAKGGWGPTVKAKKLEPGDSGAS 216

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  LR+RL+  G L  +   +  +D+ +  AV  FQ  HGL   G+V   TL  +N  V+
Sbjct: 217 VVALRDRLVRMGYLKRTA--TGTYDSTMTDAVMRFQADHGLAQDGVVGQGTLAEINTSVE 274

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQT 228
            R++ + V + R +  + +  G R++ VN+   + + ++NGKV   +  ++G  D  RQ+
Sbjct: 275 KRLQSVIVAMERER-WVNKDRGKRHIEVNLTDFTAKIIDNGKVTFTTRSVIGARDAKRQS 333

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P     +  ++ NP W +PRSI   + +  L+Q+P  +  N++ + D  G+++    VD+
Sbjct: 334 PEFSDVMEFMVINPSWFVPRSIAIGEYLPELQQNPNAV--NHLIITDRSGRQIDRTNVDF 391

Query: 289 NSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                  F +  RQ P + NA+   K  F ++ N Y+HDTP   LF    R  + GC+R+
Sbjct: 392 TKYTARTFPYAMRQPPSRSNALGLVKFMFPNKYNIYLHDTPAKNLFGRETRAYSHGCIRL 451

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
            +  +    LL           ++ + +   T + L   VPVH +Y +A +     IQ+R
Sbjct: 452 ADPFEFAYALLAKQSNDPEGLFKKTLASGTETQLNLKKPVPVHIIYRTALANSKGQIQYR 511

Query: 407 DDIYGLDNVHVGIIPLP 423
            D+YG D      +   
Sbjct: 512 RDVYGRDGRIWNALSQA 528


>gi|152991962|ref|YP_001357683.1| hypothetical protein SUN_0366 [Sulfurovum sp. NBC37-1]
 gi|151423823|dbj|BAF71326.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 712

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 115/370 (31%), Positives = 192/370 (51%), Gaps = 10/370 (2%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLR 115
             ++       P+ +     +  +A+  Y++I   GGW +LP  + L  G SS  V  LR
Sbjct: 338 KSLEYAFKKAKPVFNH--YDRMLQALKRYKEIAENGGWKKLPEFKNLKPGMSSSVVPALR 395

Query: 116 ERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           ERL I GD    S      +   +  AVK FQ RHGL+ +G +   T +A+NV  + +++
Sbjct: 396 ERLAIEGDYVCDSNETGNRYRGCLVDAVKKFQARHGLEAAGFIGKMTRKALNVSAEEKVK 455

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L++NL RIK  +++     ++ VNIP+  +   ++ ++     VI GR   +TPI + R
Sbjct: 456 KLKLNLDRIK-WIKRDNERYHIYVNIPSFHMYMYDDKEMIRTMRVITGRKGHETPIFYGR 514

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM---IDEKGKEVFVEEVDWNSP 291
           +  I+ NPYW IP SII+ + +  L++DP Y    NI +     E   +V   +V+W+  
Sbjct: 515 VRTIVLNPYWRIPPSIIRHETIPKLQKDPGYTNKKNIEIHTGYSEHSPKVNPYKVNWHKY 574

Query: 292 --EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
             + P + F Q PG+ NA+   K  F ++ + YMHDT +  LF    R  + GCVR++  
Sbjct: 575 GRKLPPYRFMQSPGEKNALGKVKYLFPNKYSVYMHDTNQRYLFVKDYRALSHGCVRLQKP 634

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
            +L     +  P       +E++   K TP +L+  +PV  VY++A   K+  + F DD+
Sbjct: 635 FELLETFAEIEPKIDYERSKEILDENKKTPYRLSKSIPVDIVYLTALVSKEGTVMFYDDV 694

Query: 410 YGLDNVHVGI 419
           YG D + + +
Sbjct: 695 YGYDRMQMAM 704


>gi|85860925|ref|YP_463127.1| peptidoglycan binding protein [Syntrophus aciditrophicus SB]
 gi|85724016|gb|ABC78959.1| peptidoglycan binding protein [Syntrophus aciditrophicus SB]
          Length = 567

 Score =  416 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 129/422 (30%), Positives = 200/422 (47%), Gaps = 21/422 (4%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDE--IINESYHSIVNDRFDNFLARVDMGIDSDIPII 70
            FF+Y        L    ++   +D    + +     +    +  L+  ++    +    
Sbjct: 147 AFFLY-----AAHLASGKVNPETVDAQWFLRKRPSPNLLRTLEQALSSAEVESILENLAP 201

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLII------SGD 123
           S    A   KA++ Y+DI  R  WP +     L  G+ S  V  LRERL +        D
Sbjct: 202 SSPAYANLRKALSKYRDIERRRKWPVMMEGIRLKKGDRSEQVALLRERLDVPEVFPFWED 261

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
            +  +G    FD Y+E AVK FQ  HGL   G+  S TLEAMNV    R+RQ++VNL R+
Sbjct: 262 REDGEGKY-LFDEYLERAVKAFQKSHGLIADGVAGSETLEAMNVTAAERVRQIKVNLERL 320

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +  +    G R V++NIP   L  +E  K    S ++VG+  + TP+  SRI   + NPY
Sbjct: 321 R-WIPDDPGDRAVIINIPEFRLRVLEKEKEVFNSRIVVGKYAQNTPVFGSRITHFILNPY 379

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPP--NFIF 298
           W +PRSI  ++++ L++Q P+YL   ++ ++   G   + V    +DW +      N+  
Sbjct: 380 WHVPRSIAVEEILPLIKQSPEYLNWEDMKVLSGSGAKTRIVPPWTIDWENMTAREFNYHL 439

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           RQDPG  N +   K  F +  + Y+HDTP   LF    R  + GC+RV N ++L V LL 
Sbjct: 440 RQDPGPRNPLGRIKFYFPNPYDVYLHDTPYLHLFEQKKRNFSHGCIRVENPVELAVVLLG 499

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                +R  +   ++T K    +L   V +   Y + W+  D  + FR DIY  D     
Sbjct: 500 GNSIETRKQLLSAIETGKRKQFQLRQPVSIRVFYFTTWAEADGTVHFRKDIYNHDLPLQK 559

Query: 419 II 420
            +
Sbjct: 560 AL 561


>gi|73537776|ref|YP_298143.1| hypothetical protein Reut_B3942 [Ralstonia eutropha JMP134]
 gi|72121113|gb|AAZ63299.1| conserved hypothetical protein [Ralstonia eutropha JMP134]
          Length = 557

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 105/372 (28%), Positives = 169/372 (45%), Gaps = 12/372 (3%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQR 113
           R+   I    P  S         A+A Y+ + ++ GW    P LP   L  G +   +  
Sbjct: 151 RLPEAIREAAP--SFPLYGTLRDALAHYRTLAAQPGWDRTLPALPGGKLTSGQAYSGLAE 208

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           +  RL   GD+         +   V   VK FQ RHGL+  G++ + TL  +N     R+
Sbjct: 209 MARRLQALGDMPADAPAPKRYSGAVVDGVKAFQARHGLEADGVIGAGTLAQLNTTPAARV 268

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NG---KVGLRSTVIVGRV-DRQT 228
           RQ+++ + R++         R ++VNIP   L A + NG    + L   VIVG+  D +T
Sbjct: 269 RQIELTMERLR-WTPLTDSPRMIVVNIPEFMLRAYDYNGGKLDIKLEMKVIVGKALDTRT 327

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P+    +  I F+PYW +P SI + + +  LR+DP Y        +        + + + 
Sbjct: 328 PLFKEDMRYIEFSPYWNVPPSIARSETIPRLRRDPAYFTQQGFEFVSNGKAVTTLSDANL 387

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           ++        RQ PG +NA+   K  F +  N Y+H TP P LF    R  + GC+RV  
Sbjct: 388 DAVLNGRMRIRQRPGPMNALGDIKFVFPNNQNIYLHHTPTPQLFKRDRRDFSHGCIRVEE 447

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
            + L  ++L+D P W+   I + +   ++  V L   +PV   Y +A +  D  + F  D
Sbjct: 448 PVALAKFVLQDMPGWTEERIRQAMTKGQSNTVALQQPLPVVLAYGTAIARADGRVYFLPD 507

Query: 409 IYGLDNVHVGII 420
           IYG D +    +
Sbjct: 508 IYGQDKLLDQAL 519


>gi|296446244|ref|ZP_06888191.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296256281|gb|EFH03361.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 476

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 129/357 (36%), Positives = 196/357 (54%), Gaps = 7/357 (1%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGD 123
           D   P +  ET   T  A   Y  I   GGWP++    L  G+S  +V  LR+RL + GD
Sbjct: 115 DDPTPALQPETFFTTSLASERYAAIADAGGWPKVGA-ALKPGSSGRAVAALRKRLAVEGD 173

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           L  +      +D  +  AVK FQ R GL  +G+V  +TL  ++VP ++R RQL  +  R+
Sbjct: 174 LPSAAAAGEGWDGALTQAVKHFQFRMGLKQTGVVAGATLRELDVPANVRFRQLASSAQRL 233

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
                   G RY++VNIP+A+++AVENG+V  R T IVG VD  +P + +R+  +  NP 
Sbjct: 234 AG-NNFPFGPRYIVVNIPSAAVDAVENGRVVRRYTAIVGGVDHPSPEVEARVGAVNLNPT 292

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P SII+ ++M  ++++P YL    I ++D  G EV  + ++W +    N+  RQD G
Sbjct: 293 WTVPVSIIKNEIMPKMQKNPSYLAKLRIRVLDNHGAEVDPKTINWANERAANYTLRQDSG 352

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT- 362
             N++ S +I   +++  YMHDTP   LF +  RF + GCVRV  + DL  WLL+     
Sbjct: 353 AGNSLGSIRIAMPNKHAVYMHDTPSKRLFASDYRFLSHGCVRVEGVYDLAAWLLQGASGS 412

Query: 363 ----WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
               W +  I   +   +   V L   VPV +VY++ W+  D  + FR+D+YG+D V
Sbjct: 413 PSGQWDKAAILAKIAGGERQDVALPKPVPVVWVYMTGWASADGTVHFRNDVYGVDAV 469


>gi|83311306|ref|YP_421570.1| hypothetical protein amb2207 [Magnetospirillum magneticum AMB-1]
 gi|82946147|dbj|BAE51011.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
           magneticum AMB-1]
          Length = 535

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 128/415 (30%), Positives = 198/415 (47%), Gaps = 11/415 (2%)

Query: 16  VYLILPMGLSL-VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
              +L  G  L +   + A  +     E+       RF   LA      +  +  IS + 
Sbjct: 113 SATLLRFGRDLAIGGVLPARNVGGFGAETRGEFDGARFLKALAEGKPLAEQ-MEAISPQY 171

Query: 75  --IAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
               +    +   + I + GGWP +P    L  G +   V  LR RLI SGDL       
Sbjct: 172 VGYIRLRDGLERARAIAAAGGWPTIPDGAKLVPGETDERVPLLRRRLIASGDLADGLAEG 231

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +DA +  AVK FQ RHGLDP   V   TL  +NVP D R+RQ+  NL R +  + +  
Sbjct: 232 KIYDATLAEAVKRFQARHGLDPDATVGGKTLAHLNVPADARVRQITANLERWR-WMPRSF 290

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G  +V VNI A  +E VE+G V +   V+VG     TP +++ ++ ++ NP W +P SI 
Sbjct: 291 GRHHVAVNIAAQQMEVVEDGSVAMVMRVVVGDTKHPTPSMNTTMSSVVLNPAWRVPTSIA 350

Query: 252 QKDMMALLRQDPQYLKDNNIHMID--EKGKEVFVEEVDWNSP-EPPNFIFRQDPGKINAM 308
            K+++  LR+DP YL  + + ++D  E   E   + VDWN+  +   +  RQ PG  NA+
Sbjct: 351 NKEILPKLRKDPNYLTSSKLQIVDYPEGSPESAGDGVDWNAIGKKFPYRLRQPPGPDNAL 410

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K      ++ YMHDTP    F+   R  + GCVR+   ++L   +L     W     
Sbjct: 411 GQLKFNLTDSDDIYMHDTPNRRAFSRSYRALSHGCVRLERPVELGELMLG--ARWQGKLA 468

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
            ++   R T  + L   +PV+ +Y +AW+ ++  + FRDD+YG D   +  +   
Sbjct: 469 HDINANRSTRTLMLERTIPVYLMYWTAWADENGNLHFRDDLYGHDRRLMTALERA 523


>gi|220924541|ref|YP_002499843.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219949148|gb|ACL59540.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 540

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 136/359 (37%), Positives = 201/359 (55%), Gaps = 9/359 (2%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISG 122
               P ++  T   T +    YQ I+  GGWP +P    L  G+ + +V  LR RL ++ 
Sbjct: 119 QDPTPTLAPSTFLDTLRMADRYQAIVQAGGWPGVPANLSLKPGDRNPAVALLRRRLAVTE 178

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S   D  + +A+K FQ RHGL  +G++   T++A+NVP   R RQL  +  R
Sbjct: 179 DLAADAPASDVMDEALVAALKRFQQRHGLPDTGLLGPMTVKALNVPASTRQRQLAASASR 238

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           +        G RYV+ NIP+A++EAVE G V  R   +VG+ DR +P++ +RI  + FNP
Sbjct: 239 LMG-SRFPFGERYVVANIPSATVEAVERGTVARRYVAVVGKPDRASPLVETRITNVNFNP 297

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P S+I+KD++  +R+DP YL   +I M+D +G EV    +DW++ +  N+  RQDP
Sbjct: 298 TWTVPVSLIKKDIIPHMRKDPGYLAKMHIRMLDGQGNEVQPTAIDWSTEKAVNYTLRQDP 357

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   +I+  +R+  YMHDTP   LF+   RF +SGCVRV  +  L  WLL+ TP 
Sbjct: 358 GFDNSLGQVRIDMPNRHAVYMHDTPSKNLFSRTARFHSSGCVRVAEVKGLVGWLLEGTPG 417

Query: 363 WSRY-------HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                       IE  + T +   +KLA  VPV FVY++ ++  D    FRDD+Y LD 
Sbjct: 418 PGGPGTVWGPMEIETGIATGERRDIKLAKPVPVTFVYLTGYATPDGRAHFRDDVYSLDG 476


>gi|188591281|ref|YP_001795881.1| hypothetical protein RALTA_A0493 [Cupriavidus taiwanensis LMG
           19424]
 gi|170938175|emb|CAP63161.1| conserved hypothetical protein, COG2989; putative exported protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 529

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 119/415 (28%), Positives = 189/415 (45%), Gaps = 26/415 (6%)

Query: 38  EIINESYHSIVNDRFDNFLA--------RVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
             ++ ++       FD            R+   I    P           +A+A Y+DI 
Sbjct: 113 RAVHANFAPPAERPFDAATWLRDAVAQHRLPDAIRQAAPTF--PLYGTLRQALARYRDIA 170

Query: 90  SRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
            +  W    P LP   L  G        L  RL+  GDL         ++  +   VK F
Sbjct: 171 RQPVWQQPLPPLPASKLTPGQPWAGAAALTARLVALGDLPAGTQPPARYEGALVDGVKAF 230

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q RHGL   G++ ++TL  +N+P+  R+RQ+++ + R++       G R ++VN+P   L
Sbjct: 231 QSRHGLQADGVIGAATLAQLNLPIADRVRQIELTMERLRWTP--LDGPRMIVVNVPEFML 288

Query: 206 EAVE--NGK--VGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
            A E  +GK  + L   VIVG+  D +TP+    +  I F+PYW IP SI +++ +  LR
Sbjct: 289 RAYEIRDGKLDIKLEMKVIVGKALDTRTPLFEEDMRYIEFSPYWNIPPSIARRETVPRLR 348

Query: 261 QDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           +DP Y     +  +   GK V  + E + ++    +   RQ PG +NA+   K  F +  
Sbjct: 349 RDPGYFSRQGLEFVGGDGKAVTTLSEENLDAVLNGSLRIRQRPGPLNALGDIKFVFPNNE 408

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
           N Y+H TP P LF    R  + GC+RV   + L  ++L D P W+   I E +   K+  
Sbjct: 409 NIYLHHTPSPQLFKRDRRDFSHGCIRVEAPVALAQFVLHDMPDWNEARIREAMARGKSNT 468

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP----LPEDHPIDS 430
           V+L   +PV   Y +  +  D  + F+ DIYG D +    +      P+   I S
Sbjct: 469 VRLQQPLPVVLAYGTVIARADGRVSFQPDIYGHDKLLDKALRQRTGRPQPRAIAS 523


>gi|218781317|ref|YP_002432635.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762701|gb|ACL05167.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 563

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 120/413 (29%), Positives = 198/413 (47%), Gaps = 15/413 (3%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARV--DMGIDSDIPIISKE--TI 75
           L  G  L+   ++   ++    +             LA       ++  +  ++ +    
Sbjct: 150 LIYGAHLLGGKVNPETIEP---DWTAGKREADLPALLAEALKTNDVEKALKSLAPQDVAY 206

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDL-DPSKGLSVA 133
              +  +   +    +     +   P   LG        LR RL  +G L   S+     
Sbjct: 207 RSMQDLLKQLRAAAPQPSVRLVQTAPSFKLGYRGPQTAALRARLAAAGFLGQDSEQDKEV 266

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           F+  +E+A+K FQ   GL+  G+   +TL A+N      I  ++ NL R +  + Q +G 
Sbjct: 267 FNESLEAALKKFQASWGLEADGVCGPATLHAVNRSEKDNIAAIRANLERWR-WMPQNLGD 325

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R++LVNI    L  VENG+  L    IVG++ R+TP+   R+  ++ +PYW +P SI +K
Sbjct: 326 RHILVNIADFHLAVVENGEELLAMKAIVGKLYRKTPVFSGRLTYLVISPYWDVPPSIARK 385

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR--QDPGKINAM 308
           D + L+++DP Y   N+  +    G   +E+    VDW +  P NF +R  Q PG  NA+
Sbjct: 386 DKLPLMQKDPNYFTANHFLVYQGWGADSREIDPASVDWKALGPNNFPYRLRQKPGPGNAL 445

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F +++N Y+HDTP   LF    R  +SGC+R+++ I L  +LLKD P W+R  I
Sbjct: 446 GRIKFMFPNKHNVYIHDTPSHDLFAKSQRNFSSGCIRIQDPIGLAEYLLKDAPGWNREAI 505

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           E+ V  +    V L+  +PVH +Y +A+      + FR+DIYG D   +  + 
Sbjct: 506 EDAVDNKIEKTVSLSRPIPVHIMYFTAFGDTRGAVHFRNDIYGRDARLLEALD 558


>gi|56696802|ref|YP_167164.1| peptidoglycan binding protein, putative [Ruegeria pomeroyi DSS-3]
 gi|56678539|gb|AAV95205.1| peptidoglycan binding protein, putative [Ruegeria pomeroyi DSS-3]
          Length = 537

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 188/407 (46%), Gaps = 10/407 (2%)

Query: 22  MGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
               L    +  S +D+ +         + + + L   + G    +   +        K 
Sbjct: 127 FARDLQTGLLTPSQIDDGMVRVVERRGAEAYLSELQAAEPGRYMRMLAPNTSQYRALLKL 186

Query: 82  IAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
               +  L+ GGW P +    L  G+    V  LR RLI  G +D S   S  +D  ++ 
Sbjct: 187 KLDLEQALATGGWGPTVAGGKLAPGDGGPRVVALRNRLIAMGFMDRSAVAS--YDGTLQK 244

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AV+ FQ+ HGL+  G+    TL+ +N  V  R++ + V L R +  L +  G R++LVN 
Sbjct: 245 AVQAFQLAHGLEADGVAGDGTLDEINKSVADRLKSVIVALERER-WLPRDRGERHILVNQ 303

Query: 201 PAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
              + + V++G+V   +  ++G+   DR++P     +  ++ NP W +PRSII K+ +  
Sbjct: 304 TDFTAKIVDHGRVTFETRSVIGKNVSDRRSPEFSDEMEHMVINPSWYVPRSIITKEYLPK 363

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFY 316
           LR +P  +   ++ + D +G++V    VD++     +F F  RQ PGK NA+   K  F 
Sbjct: 364 LRANPNAV--RHLEITDSRGRQVNRGAVDFSQFSSRSFPFAMRQPPGKSNALGLVKFMFP 421

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +     V+ T +
Sbjct: 422 NKYNIYLHDTPQKDLFAREVRAYSHGCIRLAQPFEFAYALLALQEADPKSFFHNVLNTGR 481

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
            T V L   VPVH +Y +A         +R D+YG D      +   
Sbjct: 482 ETKVDLERHVPVHIIYRTAVVDDRGQAGYRRDVYGRDAKIWEALSRA 528


>gi|284007574|emb|CBA73124.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 563

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 112/390 (28%), Positives = 195/390 (50%), Gaps = 22/390 (5%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-P 98
           +++   +I + +  +++  +     S +P+ +        K +A+   +  +  WP++  
Sbjct: 177 VSQWQTAINSKQLASWIKTLAPQHASYLPMRT--------KMLAY---LADQQIWPKINT 225

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGM 156
           +  L  G +S  +  L E L  +G L           +   +  AVK FQ  +GL+P G+
Sbjct: 226 VSLLKPGQTSNDLVSLSEILTRNGLLTQDADTDNTRHYGGLLVDAVKQFQRMYGLEPDGI 285

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           + ++TL+ +N     R   L +N+ R++ +  +  G   +LVNIPA +L    N ++ + 
Sbjct: 286 IGNATLKWLNTSPTDRAGLLAINIQRLRIIPNE--GGSGILVNIPAYTLHFYLNNQLIID 343

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
           S VIVGR DR+TPI+ S +N ++ NP W +P S+++KD++   R+DP Y       ++  
Sbjct: 344 SKVIVGRPDRKTPIMSSELNSVVINPPWNVPTSMVRKDILPQARRDPGYFARRGFTVLSG 403

Query: 277 KGK---EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
             +    +    ++WN+    +F +  RQ PG  NA+   K    S +  Y+HDTP   L
Sbjct: 404 WERNAYPIDPYSINWNAISSSSFPYRVRQAPGPSNALGRYKFNMPSSDAIYLHDTPNHSL 463

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           FN   R  +SGCVRV     L   LL    +W +  I+  ++  +T  + +   +P++  
Sbjct: 464 FNRQNRSISSGCVRVNKASVLASILLARA-SWDQKRIDGALQLGETRYINIPGRIPIYLY 522

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           Y +AW    +I  FRDDIYG DNV  G + 
Sbjct: 523 YQTAWVDNKNIANFRDDIYGYDNVIYGAMN 552


>gi|114047885|ref|YP_738435.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889327|gb|ABI43378.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-7]
          Length = 560

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 115/434 (26%), Positives = 213/434 (49%), Gaps = 28/434 (6%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDI---------P 68
            I+   + L+   ++ S+L +  N     +    FD  L +++  I +           P
Sbjct: 127 GIITYAIHLLNGKVNPSMLGKTWNYDETHLD---FDTTLKQLEEHIKAHTVADAIAGLAP 183

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPS 127
            I+     Q ++ +A Y+D+ +R  +  +P    +  G++S SVQ +  RL   G L  S
Sbjct: 184 KIAP--YQQLKQYLAQYKDLAARYPFSPIPYTEVIKPGSTSPSVQGIATRLTELGYLAAS 241

Query: 128 KGLSV--------AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
                         +D+ +E+AV+ FQ  H L   G++ + T+ A+NVP   R+ Q+++N
Sbjct: 242 APADNSAAVSQPLTYDSTLEAAVRQFQTDHSLKADGVIGAGTMAALNVPYSQRVEQIRIN 301

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           L R +  L   +   Y++VN+    L   ++  +  R+ +I+G+++ +TP+  S++  ++
Sbjct: 302 LERAR-WLSANLRANYLIVNLAGYELLLFKDNSLSWRTDIIIGKINAKTPLFKSKLKYVV 360

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI-- 297
            NP W +PRSI   +++  LR+DP YL+  +  +++  G  V    +DW+S    NF   
Sbjct: 361 VNPTWTVPRSIST-EIINHLRKDPDYLQKKHFKVVEGSGTPVDASGIDWHSMTRKNFPYW 419

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           F Q+PG+ N++   K  F ++ + Y+HDTP   LF    R  + GC+RV++ + L   LL
Sbjct: 420 FVQEPGEDNSLGVVKFIFPNQYSIYLHDTPAKSLFEQTDRAFSHGCIRVKDPLVLADKLL 479

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
                WS   +   +   KT  + L   + +  +Y +    KD  I+F +D+Y  D V +
Sbjct: 480 SANANWSSNTLSSKLSEGKTENLFLDEPLDILIMYWTVTL-KDGKIKFYNDVYKRDPVLI 538

Query: 418 GIIPLPEDHPIDSD 431
             +  P    + +D
Sbjct: 539 EALNRPTYEGVLAD 552


>gi|290473860|ref|YP_003466734.1| putative carboxypeptidasewith PGDB-like domain [Xenorhabdus
           bovienii SS-2004]
 gi|289173167|emb|CBJ79940.1| putative carboxypeptidasewith PGDB-like domain [Xenorhabdus
           bovienii SS-2004]
          Length = 572

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 120/431 (27%), Positives = 189/431 (43%), Gaps = 47/431 (10%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K +  LY    Y I      L++K      +                
Sbjct: 151 MLGYLHFVNDVKKKGDSWLYSKKSYKINLPPPDLIDK--WQQHI---------------- 192

Query: 53  DNFLARVDMGIDSDIPIISK--ETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSV 109
                  D  + S I  +S          K     + +  +  W +  ++  L  G +S 
Sbjct: 193 ------TDNNVFSYITALSPNNPMYKNMRK--EMLKQLADKQQWSDFSMKGTLRPGQNSE 244

Query: 110 SVQRLRERLIISGDLDP--SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           SV  LRE LI S  LD    K  +  ++  + +AVK FQ  HGL   G++  ST   +N 
Sbjct: 245 SVVALREILIRSDTLDSLTVKPENKVYNKELVAAVKRFQALHGLSADGVIGQSTKVWLNT 304

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
               R R + +N+ R++ + +       +LVNIP  SL    +GK  L S V+VGR  R+
Sbjct: 305 TPQTRARIMALNIQRLRIIPDNI--PTGILVNIPNYSLFYYLDGKEVLNSKVVVGRPSRK 362

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVE 284
           TPI+ S +N ++ NP W +P S+ +KD+     +DP Y +     +      +   +   
Sbjct: 363 TPIMSSNLNNVVINPPWTVPTSMTRKDIAPRAMRDPSYFRSRGYTVFSSWSNDAKVIDPS 422

Query: 285 EVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            ++W+   P NF +  RQ PG  N++   K    +    Y+HDTP    F   +R  +SG
Sbjct: 423 SINWDVTTPNNFPYRIRQAPGPTNSLGRFKFNMPNSEAIYLHDTPNQASFGREMRAVSSG 482

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           CVRV    +L   LL +   W++  +   +KT  T  V +  ++PV   Y +AW  +  +
Sbjct: 483 CVRVNKAPELANMLLGNA-GWNKDRVSNSLKTWTTAYVNIPKKIPVFLYYQTAWVDEGGV 541

Query: 403 IQFRDDIYGLD 413
            Q+R DIY  D
Sbjct: 542 PQYRADIYDYD 552


>gi|304393082|ref|ZP_07375011.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303294847|gb|EFL89218.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 492

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 127/362 (35%), Positives = 178/362 (49%), Gaps = 9/362 (2%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
                  I FY  I   GGWP++P    L +G     V  LR+RL I+GD       S  
Sbjct: 50  YRGLATGITFYTQIAQSGGWPQVPEGGTLSVGVDDPRVPILRQRLYITGDYLGEDTQSTM 109

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FDA ++ AV  FQ R+G +P G V  +TL +MNVPV+ R+ QL++N  R    +   +G 
Sbjct: 110 FDAALKEAVVAFQNRNGQEPDGAVGPATLASMNVPVEKRLEQLRIN-QRRWDNMPASLGD 168

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R+VLVN+    LE +E  K  L   V+VG+    TP     I  I  NPYW +P SI  K
Sbjct: 169 RFVLVNMAGFELEVIEGEKTVLDMKVVVGKDYHSTPEFSDLIKTIEINPYWNVPASIANK 228

Query: 254 DMMALLRQDPQYLKD---NNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQDPGKINAM 308
           ++     +    L         +++   + V V ++ W   +  N  F  RQ PG  NA+
Sbjct: 229 ELKLDYMKGAATLAKADSQGYEVVNGD-QVVPVSQIAWTKYKDDNLPFRIRQRPGPSNAL 287

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F +++N Y+HDT    LF+  VR  + GCVR+    +L  +LL     W R  I
Sbjct: 288 GDMKFLFPNKHNVYLHDTQAKSLFSKTVRAFSHGCVRLHRPRELAEYLLA-ANGWDRAKI 346

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPI 428
           +EVV + + T VKL    PVH  Y++AW  +   IQFR DIYG D      +  P     
Sbjct: 347 DEVVASGERTRVKLEQPTPVHLAYMTAWLGRQGFIQFRPDIYGRDAEDAQQLAPPPSDDF 406

Query: 429 DS 430
           +S
Sbjct: 407 NS 408


>gi|85857899|ref|YP_460101.1| cell wall degradation protein [Syntrophus aciditrophicus SB]
 gi|85720990|gb|ABC75933.1| cell wall degradation protein [Syntrophus aciditrophicus SB]
          Length = 625

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 128/354 (36%), Positives = 196/354 (55%), Gaps = 10/354 (2%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLD-PSKGLSV 132
             +  + +  Y DI   GGW ++P  RPL  G     V+ LR+RLI +G           
Sbjct: 258 YMKLRERLNEYIDIAEAGGWRKIPAGRPLMKGMRDKRVRTLRKRLISTGMASLSQAKTDT 317

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            FD  +E+AV+ FQ +HGL   G+V  +TL  +NVPV++RI Q+ VNL R++  L  ++G
Sbjct: 318 YFDLDLETAVRRFQRQHGLREDGIVGRTTLVELNVPVEVRICQMAVNLDRLR-WLPYELG 376

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            R++L+NIP  +LE VE+ +V +    IVG+ D++T +L SRI  I  NPYW IP+SI  
Sbjct: 377 DRHILINIPDFNLEIVEDKRVVMHIRAIVGKTDKRTNLLSSRITAIELNPYWKIPKSIAV 436

Query: 253 KDMMALLRQDPQYLKDNNIHMI--DEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAM 308
           ++ +  L+++P+YL    I +   D +   V    + W+     NF +  RQ+PG  N +
Sbjct: 437 EEFLPQLKRNPRYLGKK-IKVFAGDYQTNPVSPTSIKWSRVTAENFPYFLRQEPGSDNPL 495

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP--TWSRY 366
              K  F +  + Y+HDTP   LF    R  + GCVR+   +DL  +LLK  P   WS  
Sbjct: 496 GRVKFVFSNEADIYIHDTPTRNLFTQDKRSFSHGCVRIEKPVDLAAYLLKIQPNNRWSSQ 555

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +I+  ++  K  P+ L   VPVH VY + W  ++  + FR DIY +DN+   ++
Sbjct: 556 NIQAEIRKGKNLPLPLNERVPVHIVYQTVWIDREGNLNFRPDIYDIDNIPANLL 609


>gi|114767686|ref|ZP_01446383.1| peptidoglycan binding protein, putative [Pelagibaca bermudensis
           HTCC2601]
 gi|114540304|gb|EAU43401.1| peptidoglycan binding protein, putative [Roseovarius sp. HTCC2601]
          Length = 525

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 115/402 (28%), Positives = 184/402 (45%), Gaps = 13/402 (3%)

Query: 20  LPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           L     L    +    +D  I  E       D  +         +  D+   + E     
Sbjct: 112 LQFARDLSGGALDGRRIDSGIKREPARRGSEDLLEALATGEPRAVFRDLAPKTPEYTRLM 171

Query: 79  EKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
            + ++  + I  RGGW   + +  L  G+S   V  LR+RLI  G L P+  LS  +D  
Sbjct: 172 REKLSLERVIA-RGGWGAPVTVGKLDPGDSGPGVVILRDRLIEMGYLKPT--LSARYDDA 228

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLRYV 196
           +  AV  FQ  HGL+  G+  SSTL A+NVP   R++ + V + R + +     +G R+V
Sbjct: 229 LRDAVLAFQGDHGLEADGVAGSSTLSAVNVPATERLKSVIVAMERERWINFADGLGERHV 288

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           LVNI       +++GKV   +  +VG    DR+TP     +  ++ NP W +PRSI+  +
Sbjct: 289 LVNIVDFHARIIDDGKVTFETRSVVGHQDPDRRTPEFSDVMEFMVINPSWYVPRSIVVNE 348

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            + LLR++P  +   ++ + D +G+ V      +      +F F  RQ PG  NA+   K
Sbjct: 349 YLPLLRRNPGAVS--HLVITDSRGRRVNRGN-GFAQYSAASFPFAMRQPPGPKNALGQVK 405

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F ++ N Y+HDTP   LF    R  + GC+R+ +  D    LL              +
Sbjct: 406 FMFPNKYNIYLHDTPSKHLFARGQRTFSHGCIRLGDPKDFAYALLALQTDDPEGFFASRL 465

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +    + V L   VPVH +Y +A++     + +R D+YG D 
Sbjct: 466 RGGSESRVNLEQPVPVHLIYRTAFTQAKGRVNYRADVYGRDA 507


>gi|113970655|ref|YP_734448.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885339|gb|ABI39391.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-4]
          Length = 560

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 116/443 (26%), Positives = 215/443 (48%), Gaps = 28/443 (6%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDI- 67
            I        I+   + L+   ++ S+L +  N     +    FD  L +++  I +   
Sbjct: 118 NIFEVLLSDGIITYAIHLLNGKVNPSMLGKTWNYDETHLD---FDTTLKQLEEHIKAHTV 174

Query: 68  --------PIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERL 118
                   P I+     Q ++ +A Y+D+++R  +  +P    +  G++S SVQ +  RL
Sbjct: 175 ADAIAGLAPKIAP--YQQLKQYLAQYKDLVTRYPFSPIPYTEVIKPGSTSPSVQGIATRL 232

Query: 119 IISGDLDPSKGLSV--------AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
              G L  S              +D+ +E+AV+ FQ  H L   G++ + T+ A+NVP  
Sbjct: 233 TELGYLAASAPADNSAAVNQPLTYDSTLEAAVRQFQTDHSLKADGVIGAGTMAALNVPYS 292

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            R+ Q+++NL R +  L   +   Y++VN+    L   ++  +  R+ +I+G+++ +TP+
Sbjct: 293 QRVEQIRINLERAR-WLSANLPANYLIVNLAGYELLLFKDNSLSWRTDIIIGKINAKTPL 351

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
             S++  ++ NP W +PRSI   +++  LR+DP YL+  +  +++  G  V    +DW+S
Sbjct: 352 FKSKLKYVVVNPTWTVPRSIST-EIINHLRKDPDYLQKKHFKVVEGSGTPVDASGIDWHS 410

Query: 291 PEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               NF   F Q+PG+ N++   K  F ++ + Y+HDTP   LF    R  + GC+RV++
Sbjct: 411 MTRKNFPYWFVQEPGEDNSLGVVKFIFPNQYSIYLHDTPAKSLFEQTDRAFSHGCIRVKD 470

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
            + L   LL     WS   +   +   KT  + L   + +  +Y +    KD  I+F +D
Sbjct: 471 PLVLADKLLSANANWSSNTLSSKLSEGKTENLFLDEPLDILIMYWTVTL-KDGKIKFYND 529

Query: 409 IYGLDNVHVGIIPLPEDHPIDSD 431
           +Y  D V +  +  P    + +D
Sbjct: 530 VYKRDPVLIEALNRPTYEGVLAD 552


>gi|149203870|ref|ZP_01880839.1| peptidoglycan binding protein, putative [Roseovarius sp. TM1035]
 gi|149142987|gb|EDM31029.1| peptidoglycan binding protein, putative [Roseovarius sp. TM1035]
          Length = 522

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 106/395 (26%), Positives = 193/395 (48%), Gaps = 11/395 (2%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           + + V+ +I  E          +  LA+    +  ++   S E     ++ +   + +++
Sbjct: 122 VPSKVIGDIKREVVRQESGALLNEILAKEPSRVMRNLAPRSNEYARLLKQKL-RLEQLVA 180

Query: 91  RGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
            GGW   +    L  G+S  +V  LR RLI  G LD S      +D  ++ AV+ FQ  H
Sbjct: 181 EGGWGAAVSAEKLRPGDSGPAVIALRNRLIAMGYLDRSAA--QTYDMRLQQAVQAFQGDH 238

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL+  G+  S+TL A+N P   R++ + V + R +  L ++ G R++LVN+   S   ++
Sbjct: 239 GLETDGIAGSTTLAAVNTPATERLKSVIVAMERER-WLSEERGQRHILVNLTDFSARILD 297

Query: 210 NGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           N  V   +  ++G+ D  R++P     +  ++ NP W +P SI   + +  ++++P    
Sbjct: 298 NDSVTFATRAVIGKNDQNRRSPEFSDEMEYMVINPTWHVPYSIAVNEYLPQMQRNPG--A 355

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHD 325
            +++ + +  G+EV    V++ +    NF F  +Q P + NA+   K  F ++ N Y+HD
Sbjct: 356 ASHLKLYNRNGREVSRGAVNFGAYNARNFPFAIKQPPSERNALGLVKFMFPNKYNIYLHD 415

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
           TP+  LF+   R  + GC+R+    D    LL    +  +     V+ T + T V+L   
Sbjct: 416 TPQKALFDLEKRDFSHGCIRLHQPFDFAYALLGRQESDPKAFFHSVLGTGRETYVQLEQH 475

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           VPVH +Y +A++      Q+R D+YG D      +
Sbjct: 476 VPVHIIYRTAFTQAQGRPQYRGDVYGRDARIWEAL 510


>gi|83953680|ref|ZP_00962401.1| peptidoglycan binding protein, putative [Sulfitobacter sp.
           NAS-14.1]
 gi|83841625|gb|EAP80794.1| peptidoglycan binding protein, putative [Sulfitobacter sp.
           NAS-14.1]
          Length = 528

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 116/372 (31%), Positives = 193/372 (51%), Gaps = 11/372 (2%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQ 112
           +F++        ++   + E  A   + +   + +L++GGW P +P   L  G     V 
Sbjct: 151 DFISSDPTPFLRNLRPRTMEYNALMREKL-RMEHLLTQGGWGPAVPASSLKPGAQGTQVV 209

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            LR RL+  G L  S  ++  +DA ++ AV+ FQ  HGL+  G+  S T+  +N  V+ R
Sbjct: 210 ALRNRLMSMGYLKRSNVMT--YDATLQEAVRSFQKDHGLNEDGVAGSGTMAEINKSVETR 267

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPI 230
           ++ + V + R +  L ++ G R+VLVNIPA +   V+NG+V   +  +VG  + DR TP 
Sbjct: 268 LQSVIVAMERER-WLNKERGARHVLVNIPAFTASVVDNGQVTFETRSVVGANQSDRLTPE 326

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
               +  I+ NP W +PRSI+ K+ +  ++++P      +I +ID +G+ +    V+++ 
Sbjct: 327 FSDVMEYIVINPTWTVPRSIVTKEYLPSMQRNPN--AAGHIDLIDNRGRIISRGSVNFSR 384

Query: 291 PEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                F +  RQ PG+ NA+   K  F ++ N Y+HDTP   LF+  VR  + GCVR+ +
Sbjct: 385 YTARTFPYGMRQKPGQTNALGLVKFIFPNKYNIYLHDTPSKSLFDRDVRAFSHGCVRLAD 444

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
             D    LL         + +  + T + T V L TEVPVH +Y +A++      Q+R D
Sbjct: 445 PFDFAYTLLAPQAADPVAYFKRQLATGRETFVHLDTEVPVHIIYRTAFTTPRGHTQYRAD 504

Query: 409 IYGLDNVHVGII 420
           IYG D      +
Sbjct: 505 IYGRDGRIWDAL 516


>gi|213027433|ref|ZP_03341880.1| hypothetical protein Salmonelentericaenterica_35663 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 410

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 114/416 (27%), Positives = 178/416 (42%), Gaps = 60/416 (14%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPL 102
            +++   +   F+A +                A    A+     +     WP+L     L
Sbjct: 2   KYALEEGQLPMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLTNTATL 50

Query: 103 HLGNSSVSVQRLRERLIISGDLD------------------------------------- 125
             G  S  V  LRE L  +G LD                                     
Sbjct: 51  RPGQWSNDVPALREILQRTGMLDGGPKIALPGDNTSDSAVVSPSAVVDETSVAQPVDEPT 110

Query: 126 ----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
                    + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ 
Sbjct: 111 ARRSKPAPAARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQ 170

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++ L  +      ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ N
Sbjct: 171 RLRLLPAEL--STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVN 228

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR 299
           P W +P ++ +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR
Sbjct: 229 PPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFR 288

Query: 300 --QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
             Q PG  N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL
Sbjct: 289 FQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLL 348

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +D   W+   I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 349 QDA-GWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 403


>gi|83942461|ref|ZP_00954922.1| peptidoglycan binding protein, putative [Sulfitobacter sp. EE-36]
 gi|83846554|gb|EAP84430.1| peptidoglycan binding protein, putative [Sulfitobacter sp. EE-36]
          Length = 528

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 116/372 (31%), Positives = 193/372 (51%), Gaps = 11/372 (2%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQ 112
           +F++        ++   + E  A   + +   + +L++GGW P +P   L  G     V 
Sbjct: 151 DFISSDPTPFLRNLRPRTMEYNALMREKL-RMEHLLTQGGWGPAVPASSLKPGAQGTQVV 209

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            LR RL+  G L  S  ++  +DA ++ AV+ FQ  HGL+  G+  S T+  +N  V+ R
Sbjct: 210 ALRNRLMSMGYLKRSNVMT--YDATLQEAVRSFQKDHGLNEDGVAGSGTMAEINKSVETR 267

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPI 230
           ++ + V + R +  L ++ G R+VLVNIPA +   V+NG+V   +  +VG  + DR TP 
Sbjct: 268 LQSVIVAMERER-WLNKERGARHVLVNIPAFTASVVDNGQVTFETRSVVGANQSDRLTPE 326

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
               +  I+ NP W +PRSI+ K+ +  ++++P      +I +ID +G+ +    V+++ 
Sbjct: 327 FSDVMEYIVINPTWTVPRSIVTKEYLPSMQRNPN--AAGHIDLIDNRGRIISRGSVNFSR 384

Query: 291 PEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                F +  RQ PG+ NA+   K  F ++ N Y+HDTP   LF+  VR  + GCVR+ +
Sbjct: 385 YTARTFPYGMRQKPGRTNALGLVKFIFPNKYNIYLHDTPSKSLFDRDVRAFSHGCVRLAD 444

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
             D    LL         + +  + T + T V L TEVPVH +Y +A++      Q+R D
Sbjct: 445 PFDFAYTLLAPQAADPVAYFKRQLATGRETFVHLDTEVPVHIIYRTAFTTPRGHTQYRAD 504

Query: 409 IYGLDNVHVGII 420
           IYG D      +
Sbjct: 505 IYGRDGRIWDAL 516


>gi|312114029|ref|YP_004011625.1| peptidoglycan-binding protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219158|gb|ADP70526.1| Peptidoglycan-binding domain 1 protein [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 428

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 149/382 (39%), Positives = 220/382 (57%), Gaps = 8/382 (2%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR 100
           ++S+   + DR   F    +   +   P ++KE IA T+ AI  Y +I++RGGWP+LP  
Sbjct: 45  DDSWEQPMRDR--AFQREWETQPERGFPTLAKENIATTKTAIKQYAEIVARGGWPQLPPI 102

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G S  +V +LR RL ++GDL    G    FD+YVE AVK  Q RHG+ P+G +D +
Sbjct: 103 ELRTGMSHPAVVQLRTRLQVTGDLQAYGGYPEVFDSYVEQAVKRAQERHGIPPTGFLDQT 162

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T+EA+NVP   R+RQL+ NL R++ L+      +YV+VNIPAA +EAV N +V  R   +
Sbjct: 163 TIEALNVPASARLRQLRTNLARLQSLVPGTPAGKYVIVNIPAAQIEAVNNNQVISRHAGV 222

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI-----D 275
           VG+ DR +P+L+S I  I FN  WV+P ++++ D++   R     L    I         
Sbjct: 223 VGKPDRPSPLLNSAIEEINFNKEWVVPPTVLKYDLVPKGRGGQDVLAKYKIDAYATHEDY 282

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           +KGK++   ++DW+S  P  + + Q PG  N +   KI F S    YMHDTP   +F   
Sbjct: 283 QKGKKLDASQIDWSSDAPLRYFYVQAPGDENPLGFAKINFASPQGVYMHDTPGQSVFQRS 342

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            R ++SGC+RV+NI  L  WLL+D   WS   +  + ++ +   V+L   VP+++ YI+A
Sbjct: 343 FRADSSGCIRVQNIHQLVAWLLEDN-GWSVQQVLRMKQSGERLFVRLKKRVPLYWTYITA 401

Query: 396 WSPKDSIIQFRDDIYGLDNVHV 417
           WS  D  +QFR DIY  D V  
Sbjct: 402 WSTPDGTVQFRRDIYRKDGVEA 423


>gi|227356807|ref|ZP_03841192.1| peptidoglycan binding domain protein [Proteus mirabilis ATCC 29906]
 gi|227163097|gb|EEI48032.1| peptidoglycan binding domain protein [Proteus mirabilis ATCC 29906]
          Length = 571

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 102/375 (27%), Positives = 170/375 (45%), Gaps = 18/375 (4%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSV 109
           + +     +   + S  P  S       ++ +   + +     WP +  +  L    S+ 
Sbjct: 188 QLNLQQNTLGRFVVSFAP--SHPYYPLMKEEVR--KQLHQEVIWPVMEGKNSLKPNQSAE 243

Query: 110 SVQRLRERLIISGDLD-----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
            V  LR+ L     L        +  +  +D  + +AVK FQ  HGL+  G++   T   
Sbjct: 244 EVIALRQILRNLNLLPQLAENEQEVATTIYDEPLIAAVKSFQAAHGLETDGIIGRQTRNW 303

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +N+    R   + +N+ R++      +G   + VNIP  SL    N ++ L S VIVGR 
Sbjct: 304 LNMTPIQRAGIMALNIQRLRLTPP--IGDTGIWVNIPDYSLYFYANNQLILDSKVIVGRP 361

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---V 281
           DR+TPI+ S +N ++ NP W +P S+ +KD++   + DP Y       +    G +   +
Sbjct: 362 DRKTPIMSSALNNVVVNPPWNVPTSMTRKDIVPKGKADPSYFSRKGYTIYSGWGNDAYPI 421

Query: 282 FVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
              ++DW +    NF +R  Q PG  N++   K    +    Y+HDTP   LF   +R  
Sbjct: 422 NPYDIDWENISAANFPYRIWQAPGPTNSLGRYKFNMPNSEAIYLHDTPNHNLFTKNMRAI 481

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGC+RV     L   LL D   W +  I+  +K   T    +   +PV+  Y +AW  +
Sbjct: 482 SSGCIRVNKAAQLATILLGDA-GWKQDRIDAALKRGSTQYAPIPERIPVYLYYQTAWVAE 540

Query: 400 DSIIQFRDDIYGLDN 414
           ++  Q+R DIY  D 
Sbjct: 541 ENAPQYRADIYNYDQ 555


>gi|197284624|ref|YP_002150496.1| hypothetical protein PMI0730 [Proteus mirabilis HI4320]
 gi|194682111|emb|CAR41705.1| conserved hypothetical protein [Proteus mirabilis HI4320]
          Length = 571

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 103/375 (27%), Positives = 171/375 (45%), Gaps = 18/375 (4%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSV 109
           + +     +   + S  P  S       ++ +   + +     WP +  +  L    S+ 
Sbjct: 188 QLNLQQNTLGRFVVSFAP--SHPYYPLMKEEVR--KQLHQEVIWPVMEGKNSLKPNQSAE 243

Query: 110 SVQRLRERLIISGDLD-----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
            V  LR+ L     L        +  +  +DA + +AVK FQ  HGL+  G++   T   
Sbjct: 244 EVIALRQILRNLNLLPQLAESEQEVATTIYDAPLIAAVKSFQAAHGLETDGIIGRQTRNW 303

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +N+    R   + +N+ R++      +G   + VNIP  SL    N ++ L S VIVGR 
Sbjct: 304 LNMTPIQRAGIMALNIQRLRLTPP--IGDTGIWVNIPDYSLYFYANNQLILDSKVIVGRP 361

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---V 281
           DR+TPI+ S +N ++ NP W +P S+ +KD++   + DP Y       +    G +   +
Sbjct: 362 DRKTPIMSSALNNVVVNPPWNVPTSMTRKDIVPKGKADPSYFSRKGYTIYSGWGNDAYPI 421

Query: 282 FVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
              ++DW +    NF +R  Q PG  N++   K    +    Y+HDTP   LF   +R  
Sbjct: 422 NPYDIDWENISAANFPYRIWQAPGPTNSLGRYKFNMPNSEAIYLHDTPNHNLFTKNMRAI 481

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGC+RV     L   LL D   W +  I+  +K   T    +   +PV+  Y +AW  +
Sbjct: 482 SSGCIRVNKAAQLATILLGDA-GWKQDRIDAALKRGSTQYAPIPERIPVYLYYQTAWVAE 540

Query: 400 DSIIQFRDDIYGLDN 414
           ++  Q+R DIY  D 
Sbjct: 541 ENAPQYRADIYNYDQ 555


>gi|256419987|ref|YP_003120640.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256034895|gb|ACU58439.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 549

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 110/409 (26%), Positives = 177/409 (43%), Gaps = 9/409 (2%)

Query: 18  LILPMGLSLVEKPIHASVLDEIIN--ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           L+L          + + +  +     E +        ++ L  +     S          
Sbjct: 140 LLLTAQFFAYGNKVWSGLTSDSAKSLEWFIPRKKINMESLLDSMVNKPASAFEEPVNRQY 199

Query: 76  AQTEKAIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
                 +    D+     W  L    +      S   V  +++RL + GDL      S  
Sbjct: 200 KLLRNQLKKLSDLEKMP-WDSLKASRKLYKKEESDPLVTSVKQRLHLLGDL-ALADTSQL 257

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           F   ++SA++ FQ R GL   G + +  L A+NV    RIRQ+ +N+ RI+  +  +   
Sbjct: 258 FTPALDSAIRNFQDRTGLKTDGTIQAPLLNALNVTPRQRIRQILINMERIR-WVPAEPPA 316

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            Y+LVNIPA  L    N K+     V+VG+    T I  + +  ++F PYW +P  I+  
Sbjct: 317 EYLLVNIPAFKLYVYNNNKLDWTCNVVVGKPGANTVIFSNEVKYVVFAPYWNVPPGILVN 376

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           +++  ++++  YL   N+ ++   G  V    ++W      NF +  RQ PG  NA+   
Sbjct: 377 EVLPAMKRNTGYLARQNMEVVTGSGSPVNAGSLNWARYSGGNFPYIIRQKPGGHNALGKV 436

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F +  N Y+HDTP   LF    R  + GC+RV     L  WLL+   TW++  I E 
Sbjct: 437 KFLFPNEYNIYLHDTPSKGLFGENKRTFSHGCIRVSEPQHLAEWLLRKDSTWTQKKIVEA 496

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +   K   V L   VPV+  Y +A+   D  + FRDD+YG D      +
Sbjct: 497 MNGSKEKFVTLKERVPVYIGYFTAFVDSDGRLNFRDDVYGHDAKLAATL 545


>gi|224369240|ref|YP_002603404.1| hypothetical protein HRM2_21420 [Desulfobacterium autotrophicum
           HRM2]
 gi|223691957|gb|ACN15240.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 549

 Score =  411 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 184/413 (44%), Gaps = 24/413 (5%)

Query: 22  MGLSLVEKPIHASVLDEIINESY---HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           +   +V   + A   +   +        +  +  D F   +                   
Sbjct: 144 LKSYMVNPELFAEAGERGFDPLKMVETILATENLDEFFQSLPPQ---------HHQYRGL 194

Query: 79  EKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV---AF 134
            K +  Y  +   G W +L     +  G+    +  +R+R+ +  + +     S     +
Sbjct: 195 RKGLLHYGLLKYSGKWKDLSGTESIRPGDEDERIVEIRKRIALLENDNKEISKSAEPSVY 254

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +   V LFQ  HGL   G++  +T++ +N   + R+ Q+++N+ R +   +  +G +
Sbjct: 255 DHELLKKVVLFQQTHGLVQDGIIGRNTIQELNKSPEDRVDQIKINMARWR-WQDHGLGDK 313

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y+LVNI   SL A + G++     VIVG+   QTP+   +I  +  NPYW +P SI   +
Sbjct: 314 YILVNIANYSLYACKTGELKFSMPVIVGKFQHQTPVFSDKIKYLELNPYWNVPSSIAVNE 373

Query: 255 MMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSPEPP---NFIFRQDPGKINAM 308
            +  LR++P YL + NI +       G E+    ++W    P     F  RQDPG  NA+
Sbjct: 374 DLPGLRKNPSYLVEKNIRLFSNWQKDGVEIDSTAINWKRVTPSEMARFKLRQDPGPTNAL 433

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL-KDTPTWSRYH 367
              K  F +  + Y+HD+P   LF+   R  + GC+RV     L V+LL ++   W+   
Sbjct: 434 GRVKFVFPNHYSVYLHDSPAKRLFSEQKRSFSHGCIRVSEPEKLAVFLLDEEGSEWNIEQ 493

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           I +++   K   +K+   VPVH  Y +AW  KD  I F  D+YG D      +
Sbjct: 494 IHDLISQGKRKVLKIRLPVPVHITYQTAWVDKDDEILFNGDVYGRDEKLYKAL 546


>gi|260427999|ref|ZP_05781978.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
 gi|260422491|gb|EEX15742.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
          Length = 544

 Score =  411 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 112/416 (26%), Positives = 189/416 (45%), Gaps = 15/416 (3%)

Query: 11  LYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPII 70
           L   F+     +   +++       +D  I      + ++     LAR D          
Sbjct: 126 LSRTFLKYAHDLNGGMLDGR----RIDSGIKRPPQRLASEGLLQDLARRDPRAVLRDLAP 181

Query: 71  SKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
                A+        +  ++ GGW   +    L  G +   V  LR+RL+    L PS  
Sbjct: 182 HSPEYARLMHEKLTLEHRIAHGGWGATVRSGKLEPGQTGADVVALRDRLVAMNYLAPS-- 239

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LE 188
           LS  +D  + +AV  FQ  HGL   G+  SSTL A+NV  + R++ + V + R + L + 
Sbjct: 240 LSARYDDAIVAAVSRFQEDHGLKVDGVAGSSTLSAINVGPEERLKSVIVAMERERWLNMP 299

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVI 246
           + +G R++LVN+       +++GKV   +  +VG    DR+TP    R+  ++ NP W +
Sbjct: 300 EGLGARHILVNLVDFHARIIDDGKVSFETRSVVGHQDPDRRTPEFSDRMEFMVINPSWYV 359

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGK 304
           PRSI+  + +  LR++P  +   ++ + D  G+ V      +      +F +  RQ PG 
Sbjct: 360 PRSIVVNEYLPQLRRNPGAVS--HLEITDSSGRRVNRGR-GFAQYSAASFPYAMRQPPGP 416

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+ + K  F ++ N Y+HDTP   LFN   R  + GC+R+ +  D    LL       
Sbjct: 417 RNALGTVKFMFPNKYNIYLHDTPSKSLFNQNQRTYSHGCIRLGDPHDFAYALLARQTDDP 476

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
               +  ++T   T V L   VPVH +Y +A++     + +R D+YG D      +
Sbjct: 477 VGFFQSRLRTGSETRVNLDEPVPVHLIYRTAFTKAKGQVNYRPDVYGRDARIWAAL 532


>gi|85702799|ref|ZP_01033903.1| peptidoglycan binding protein, putative [Roseovarius sp. 217]
 gi|85671727|gb|EAQ26584.1| peptidoglycan binding protein, putative [Roseovarius sp. 217]
          Length = 541

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 184/366 (50%), Gaps = 11/366 (3%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERL 118
              +    P  S E     ++ +   + +++ GGW   +P   L  G++  SV  LR RL
Sbjct: 170 AFKVMRSFPPHSNEYARLLKEKL-RLERLIALGGWGGAVPAETLRPGDTGQSVVALRNRL 228

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
           I  G +  S   S  +DA ++ AV+ FQ  HGLD  G+   +T+ A+N     R++ + V
Sbjct: 229 IAMGYVTRSA--SQTYDARLQQAVQAFQTDHGLDADGVAGGATMAALNTSASERLKSVIV 286

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRIN 236
            + R +  L +  G R++LVN+   S   ++N +V   +  ++G+ D  R++P     + 
Sbjct: 287 AMERER-WLTEDRGTRHILVNLTDFSARILDNDQVTFATRAVIGKNDAGRRSPEFSDEME 345

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
            ++ NP W +P SI   + +  ++++P     +++ + +  G+EV    V++ +    NF
Sbjct: 346 HMVVNPTWHVPYSIAVNEYLPQMQRNPG--AASHLKLYNRNGREVSRGAVNFGAYNARNF 403

Query: 297 IF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
            F  +Q P + NA+   K  F ++ N Y+HDTP+  LF+   R  + GC+R+    D   
Sbjct: 404 PFAIKQPPSERNALGLVKFMFPNKYNIYLHDTPQKALFDLEKRDFSHGCIRLHQPFDFAY 463

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            LL    +  + + + V+ TR+ T V+L   VPVH +Y +A++      Q+R D+YG D 
Sbjct: 464 ALLAKQESDPQAYFKSVLDTRRETYVQLEQHVPVHIIYRTAFTQAQGRPQYRGDVYGRDG 523

Query: 415 VHVGII 420
                +
Sbjct: 524 RIWDAL 529


>gi|183598377|ref|ZP_02959870.1| hypothetical protein PROSTU_01769 [Providencia stuartii ATCC 25827]
 gi|188020553|gb|EDU58593.1| hypothetical protein PROSTU_01769 [Providencia stuartii ATCC 25827]
          Length = 575

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 128/445 (28%), Positives = 191/445 (42%), Gaps = 57/445 (12%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+            LY    Y I                  E +     +   +R 
Sbjct: 140 MLGYLQYLSGVSANGQFWLYRKQPYKIAA-------------PTAEQMKPWLDAAAENRL 186

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQ 112
           + ++           P + +E + Q +         +   G   +  + L  G SS  V 
Sbjct: 187 NEWVKLQSPQHSLYQP-MREEMLKQLK---------MDDDGLALVDTKTLKPGQSSDDVI 236

Query: 113 RLRERLIISGDLDPSK------------------GLSVAFDAYVESAVKLFQMRHGLDPS 154
            LRE L   G LD +                     +  +   +  AVK FQ R+GL+  
Sbjct: 237 ALREILYRQGLLDETAINTELDAAAPDAEIAKATAQARLYSDELVEAVKKFQQRYGLEAD 296

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           GMV   T   +N+    +   + +N+ R++ + E       +LVNIPA SL    N +V 
Sbjct: 297 GMVGKGTKVWLNMKPQQKAGLMALNIQRLRIIPENN--GTGILVNIPAFSLNFFLNDEVI 354

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           L S VIVGR DR+TPI+ S +N ++ NP W +P S+ +KD+    +QDP Y       + 
Sbjct: 355 LDSKVIVGRPDRKTPIMSSALNNVVINPPWSVPTSMARKDIAPRGKQDPSYFSRKGYTVY 414

Query: 275 DEKGK---EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
              G+   E+    ++W+   P NF +  RQ PG  N++   K    S +  Y+HDTP  
Sbjct: 415 SGWGEDSFEIDPYSINWDVITPANFPYRIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNH 474

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LFN   R  +SGCVRV    +L   LL D   W +  I+  VK   T  V +   +PV+
Sbjct: 475 SLFNRSARAISSGCVRVNKASELASILLGDA-GWEQKRIDGAVKAGSTRYVNIPDRIPVY 533

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDN 414
             Y +AW  K+   Q+R DIY  DN
Sbjct: 534 LYYQTAWVDKEQQPQYRADIYQYDN 558


>gi|326797793|ref|YP_004315612.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
 gi|326548557|gb|ADZ76942.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
          Length = 548

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 100/381 (26%), Positives = 179/381 (46%), Gaps = 20/381 (5%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL--PI 99
                  +D  D+ L        + I  + ++   Q    +  Y+++ ++  W  +    
Sbjct: 181 PKKRVSYSDYLDSLLKHPFNETGASIEPVYRQ-YEQLRGYLKKYRELAAKHKWNPIIADK 239

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   +G+SS  +++++ RL + GD      L+  +D+ + S V+ FQ RHGL P G + S
Sbjct: 240 KSYKIGDSSTVLRQIKTRLFLLGDY-QGDTLTNLYDSTLFSGVRSFQSRHGLRPDGAIGS 298

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T+  +NV    R++Q+ VN+ R +  L   +   Y+ VNIP   L       +     V
Sbjct: 299 GTINELNVLPAARLKQIAVNMERSR-WLPVSLKTDYLAVNIPEFKLHVYHADSLLWSCNV 357

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           +VG+   +T I H  +  ++F+PYW +P SI++ +++  +R+D  Y+  +N+ +  + G 
Sbjct: 358 VVGKAMHKTVIFHGDVKYVVFSPYWNVPPSIVKNEILPGMRRDRNYIAKHNMEITGKSGG 417

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                              RQ PG  N++   K  F +  N Y+HD+P   L+N   R  
Sbjct: 418 LPN---------------VRQKPGPKNSLGLVKFLFPNSYNIYLHDSPAKSLYNESSRAF 462

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           + GC+RV     L  +LL+   TW++  I + +   K   V L   VPV   Y +A+  +
Sbjct: 463 SHGCIRVSEPEKLANFLLRSDSTWNKESIYKAMHAGKEKYVTLKKTVPVFIAYFTAFIDR 522

Query: 400 DSIIQFRDDIYGLDNVHVGII 420
           +  I FR DIY  D+    ++
Sbjct: 523 EGKINFRKDIYDRDDRLAKML 543


>gi|51244920|ref|YP_064804.1| hypothetical protein DP1068 [Desulfotalea psychrophila LSv54]
 gi|50875957|emb|CAG35797.1| hypothetical protein DP1068 [Desulfotalea psychrophila LSv54]
          Length = 561

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 110/356 (30%), Positives = 186/356 (52%), Gaps = 11/356 (3%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISG-DLDPSKGLSV 132
               + A+A+Y++    G WP++ +   LH G+    +  +R+RL  +G  L+  +   +
Sbjct: 205 YKALKTALAYYRNFAKNGDWPKVAMGVNLHPGDREKRIISIRKRLQFAGPFLEAPRDSDL 264

Query: 133 A-FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
           + +D  +E AV  FQ  HGL   G++  +T++A+N+ +  +I  +++N+MR +      +
Sbjct: 265 SQYDLILEEAVLSFQQLHGLQTDGIIGRNTVDALNISIAEKIEIIRLNMMRWR-WQAHDL 323

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G RY+LVNI + +L+A  +  V L   +IVG  + +TP+  + I  I FNP+W IP SI 
Sbjct: 324 GKRYLLVNIASFNLKAFRDQDVVLDMPIIVGTEENETPVFSAWIKYIDFNPFWNIPTSIA 383

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPN---FIFRQDPGKI 305
           + +M+  LR++  YL D  I +     +   E+    +DW +  P     +  RQDPG +
Sbjct: 384 RNEMLPALRKNNYYLIDQRISLFSNWQQSAVELDSTAIDWEAITPSEISAYKLRQDPGPL 443

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWS 364
           NA+   K  F +  + YMHDTP   LF+   R  + GC+RV + + L ++LL++    W 
Sbjct: 444 NALGRIKFIFPNSYSVYMHDTPGRHLFSLSKRSFSHGCIRVSDPLSLAIFLLENQTDGWD 503

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
              I+E+ +  +   + L   V VH  Y +AW  K   I F  DIY  D      +
Sbjct: 504 TEKIKEIYEQEERKVIILTLSVAVHITYGTAWVDKGGEIHFSRDIYLRDERLRNAL 559


>gi|27377895|ref|NP_769424.1| hypothetical protein bll2784 [Bradyrhizobium japonicum USDA 110]
 gi|27351041|dbj|BAC48049.1| bll2784 [Bradyrhizobium japonicum USDA 110]
          Length = 449

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 145/353 (41%), Positives = 206/353 (58%), Gaps = 3/353 (0%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDP 126
           P   + +  + + A   Y D+  RGGWP +P      LG    +   LR+RLI+SGDL  
Sbjct: 77  PTYDEGSAQRIKDAALSYSDLAVRGGWPTIPADAKFALGVQGANDDLLRKRLIVSGDLS- 135

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           +   S AFD  +  AVK FQ RHGL P+GMV   TL AMNV V  RIRQL+ +L R++  
Sbjct: 136 ADKASGAFDQDLADAVKRFQARHGLAPTGMVTPRTLAAMNVSVQKRIRQLEASLQRLEN- 194

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           +    G RYV+VNIPAA  EAVEN  V  R  VIVG+ ++ +P L ++I  ++ NP W +
Sbjct: 195 MNFGFGQRYVVVNIPAAFAEAVENDVVVRRYRVIVGKTEKPSPTLTAQITSVVLNPTWTV 254

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI + ++ A +R+DP YL   ++ ++D     +    VDW+    PNF  RQ  G  N
Sbjct: 255 PSSIAKTEISAHMRKDPTYLSRMHMEVLDAHDNPIDPHSVDWSGTHTPNFTVRQQNGTFN 314

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+ + KI+  +  + YMHDT +  LF++  RF++ GC RV N+ DL  WLLKD P WSR 
Sbjct: 315 ALGAVKIDMPNAYSVYMHDTNQRNLFSDDYRFDSHGCSRVDNVRDLAAWLLKDQPKWSRA 374

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
            I+  + T +   V +A +VPV + Y++AW  KD  +QFR+D+Y  D   +  
Sbjct: 375 AIDAEIATGQHLDVAMAKKVPVAWTYLTAWMTKDQTVQFRNDVYNQDEQLLEA 427


>gi|330013904|ref|ZP_08307828.1| peptidoglycan binding domain protein [Klebsiella sp. MS 92-3]
 gi|328533309|gb|EGF60058.1| peptidoglycan binding domain protein [Klebsiella sp. MS 92-3]
          Length = 389

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 113/374 (30%), Positives = 177/374 (47%), Gaps = 31/374 (8%)

Query: 68  PIISKETIAQTEKAIAFYQDILS----RGGWPELP-IRPLHLGNSSVSVQRLRERLIISG 122
           P        +  +  A +Q +L+       WP++     L  G  S  +  LRE L  +G
Sbjct: 1   PAFIAGLAPRHPQYEAMHQSLLALVADSRPWPQMTGSGSLRPGEWSNDIGALREILQRTG 60

Query: 123 DLDPSK-------------------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            L+ S                         +D  +   VK FQ   GL   G++  ST +
Sbjct: 61  MLENSANIVLPGDVVSPSAKKKSKPAARGVYDRQLVEGVKRFQAMQGLGADGVIGQSTRD 120

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            +NV    R   L +N+ R++ LL  K+    ++VNIPA SL   ++G   L S VIVGR
Sbjct: 121 WLNVSSAQRAGVLALNIQRLR-LLPGKLS-TGIMVNIPAFSLVYYQDGSQVLASRVIVGR 178

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--V 281
            DR+TP++ S +N ++ NP W +P ++ +KD++  +R +P YL+ +   ++     +  +
Sbjct: 179 PDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYTVMRGWNSKETI 238

Query: 282 FVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
               VDW++    N  FR  Q PG  N++   K    S +  Y+HDTP   LF   VR  
Sbjct: 239 DPYRVDWSTITENNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDVRAL 298

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGCVRV    +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   
Sbjct: 299 SSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVDA 357

Query: 400 DSIIQFRDDIYGLD 413
           D   Q+R DIY  D
Sbjct: 358 DGRTQYRTDIYNYD 371


>gi|300722551|ref|YP_003711841.1| putative carboxypeptidase [Xenorhabdus nematophila ATCC 19061]
 gi|297629058|emb|CBJ89643.1| putative carboxypeptidasewith PGDB-like domain [Xenorhabdus
           nematophila ATCC 19061]
          Length = 572

 Score =  410 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 125/430 (29%), Positives = 192/430 (44%), Gaps = 43/430 (10%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K +  LY    Y I      ++EK                       
Sbjct: 151 MLGYLHFVNAVKGKGDSWLYSKTPYKIYLPSPHIIEK------------------WQQHI 192

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
           +N  + V   I S  P  +        K     + +  +  W E  ++  L LG S+ ++
Sbjct: 193 NN--SNVLSYIMSLSP--NHPMYENMRK--EMLEQLSDKQPWTEFLLKSTLRLGQSNENM 246

Query: 112 QRLRERLIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
             L + L+ SG LDPS   S    ++  + +AVK FQ  HGL   G++  ST   +N   
Sbjct: 247 AALEKILVRSGVLDPSVTNSDNKVYNKALVAAVKRFQTLHGLAADGVIGQSTKTWLNTAP 306

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            +R R + +N+ R++ +         + VNIP  SL+   NGK  L S V+VGR  R+TP
Sbjct: 307 QIRARIMALNIQRLRIIPGDI--PTGIFVNIPNYSLDYYLNGKEVLNSKVVVGRPSRKTP 364

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEV 286
           I+ S +N ++ NP W +P S+ +KD+     +DP Y +     +      +   +    +
Sbjct: 365 IMSSELNNVVINPPWNVPTSMTRKDIAPRAMRDPGYFRTRGYTVFSSWSNDAKVIDSSSI 424

Query: 287 DWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           +W    P NF +  RQ PG  N++   K    + +  Y+HDTP    FN  +R  +SGCV
Sbjct: 425 NWGVVTPGNFPYRIRQAPGPTNSLGRFKFNMPNSDAIYLHDTPNQTAFNREMRAISSGCV 484

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           RV    +L   LL D   W +  +   +KT  T  V +  ++PV   Y +AW  K  I Q
Sbjct: 485 RVNKAPELADMLLGDA-GWDKSKVNNSLKTWATKYVSIPKKIPVFLYYQTAWVDKKGIPQ 543

Query: 405 FRDDIYGLDN 414
           +R DIY  D 
Sbjct: 544 YRADIYDYDT 553


>gi|325106518|ref|YP_004276172.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
 gi|324975366|gb|ADY54350.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
          Length = 548

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 106/378 (28%), Positives = 180/378 (47%), Gaps = 25/378 (6%)

Query: 49  NDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI----RPLH 103
           +D  D+ L  +  +      P+         +  +  Y+++ S+     + +    +   
Sbjct: 188 SDLLDSLLTNKSSVYTVEGRPVY--RQYMLLKSFLTKYRELESQREVTTIGLDAGKKSYK 245

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G+SS ++ ++R+RL   GD   S  LS  +DA ++ AV  FQ RHGL   G++ + T++
Sbjct: 246 IGDSSDNIVKIRKRLHFLGDYKESDTLSALYDANLKEAVSNFQERHGLTNDGVIGAGTIK 305

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            MNVP+  R++ + VN+ R +  +   +   Y+ VNIP   L       +     V+VG+
Sbjct: 306 EMNVPLRDRVKTIIVNMERFR-WVPAGLNKEYLGVNIPEYKLHVYNADSLLWSCNVVVGK 364

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVF 282
              +T +    +  I+F+PYW +P SI++ +++  + ++  YLK +N+ +   E G  V 
Sbjct: 365 ELHKTVVFQGDLKYIVFSPYWNVPPSIVRNEILPAMNRNAGYLKQHNMEITGHENGLPV- 423

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                           RQ PGK N++   K  F +  N Y+HDTP   LF+   R  + G
Sbjct: 424 ---------------IRQLPGKDNSLGLVKFLFPNNFNIYLHDTPAKSLFSMEDRAFSHG 468

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           C+RV     L  +LLKD   W    I++ +   K   V L   VPV   Y +A+  +   
Sbjct: 469 CIRVSEPKKLAEFLLKDDKAWDSISIDKAMHQTKEKWVTLKNPVPVFISYFTAFVDRKGQ 528

Query: 403 IQFRDDIYGLDNVHVGII 420
           I FR DIY  D+    +I
Sbjct: 529 INFRKDIYDRDSALEKMI 546


>gi|94312745|ref|YP_585954.1| hypothetical protein Rmet_3815 [Cupriavidus metallidurans CH34]
 gi|93356597|gb|ABF10685.1| conserved hypothetical protein (peptidoglycan-binding domain)
           [Cupriavidus metallidurans CH34]
          Length = 540

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 101/374 (27%), Positives = 172/374 (45%), Gaps = 12/374 (3%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQR 113
           R+   I    P  S         A++ Y+ + ++  W    P  P   L +G     + +
Sbjct: 153 RLPAAIHEAAP--SFPLYPTLRDALSRYRALATQPLWNTPLPTPPGNKLAIGQPYDGLAQ 210

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           + +RL   GDL     +   ++  + +AV+ FQ RHGLD  G++   TL  +N     R+
Sbjct: 211 MAQRLEALGDLPQGTPVPKKYEGALVTAVESFQKRHGLDADGVIGQGTLAQLNTTPSERV 270

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE--NGK--VGLRSTVIVGRV-DRQT 228
           +Q+ + + R++       G R ++VNIP   L A +  +GK  + L   VIVG+  + +T
Sbjct: 271 KQIALTMERLR-WTPLTAGPRVIVVNIPEFMLRAYDYVDGKLDIKLEMKVIVGKALNTRT 329

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P+    +  I F+PYW +P SI + +++   R+DP Y        +        +   + 
Sbjct: 330 PMFREDMRYIEFSPYWNVPPSIARSEVVPKSRRDPGYFTRQGFEFVSGGQAITTLSSANL 389

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           ++        RQ PG +NA+   K  F +  N Y+H TP P LF    R  + GC+RV  
Sbjct: 390 DAVLNGQMRIRQRPGPLNALGDIKFVFPNNQNIYLHHTPTPQLFQRGRRDFSHGCIRVEE 449

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
            + L  ++L+D P W+   I + +   K+  + L   +PV   Y +A +  D  + F  D
Sbjct: 450 PVQLAKFVLQDMPEWTEERIRQAMSKGKSNTIALKQPLPVVLAYGTAIARADGRVYFLPD 509

Query: 409 IYGLDNVHVGIIPL 422
           IYG D +    +  
Sbjct: 510 IYGQDKLLEQALRQ 523


>gi|170742780|ref|YP_001771435.1| peptidoglycan binding domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168197054|gb|ACA19001.1| Peptidoglycan-binding domain 1 protein [Methylobacterium sp. 4-46]
          Length = 545

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 138/365 (37%), Positives = 201/365 (55%), Gaps = 9/365 (2%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRER 117
           +        P ++  T   T +    YQ I+  GGWP +P    L  G+    V  LR R
Sbjct: 119 LAPVSQDPTPTLTPATFLDTLRMADRYQAIVQAGGWPSVPASLSLKPGDRHPGVLALRRR 178

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L  + DL     +S   D  + +AV  FQ RHGL  +G+V + T++A+NVP  +R RQL 
Sbjct: 179 LAATEDLPADAPVSDRMDEALVAAVTRFQHRHGLPETGLVGAMTVKALNVPASVRQRQLA 238

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
            +  R+        G RYV+ NIPAA++EAVE G V  R   +VG+ DR +P++ +RI  
Sbjct: 239 ASAARLMG-SRFPFGERYVVANIPAAAVEAVERGAVVRRYVAVVGKPDRASPMVETRITN 297

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
           + FNP W +P S+I+KD++  +R+DP YL   +I M+D +G EV    +DW++ +  N+ 
Sbjct: 298 VNFNPTWTVPVSLIKKDIIPHMRKDPGYLAKMHIRMLDGQGNEVQPTAIDWSTEKAVNYT 357

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQDPG  N++   +I+  +R+  YMHDTP   LF   +RF +SGCVRV  +  L  WLL
Sbjct: 358 VRQDPGFDNSLGQVRIDMPNRHAVYMHDTPSKSLFTRTIRFHSSGCVRVAEVKGLVAWLL 417

Query: 358 KDTPTWSRY-------HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           + TP             IE  + T +   +KLA  VPV FVY++ ++  D    FRDD+Y
Sbjct: 418 EGTPGPGGPGTVWGPIEIETGIATGERRDIKLAKPVPVTFVYLTGYATPDGRAHFRDDVY 477

Query: 411 GLDNV 415
            LD  
Sbjct: 478 NLDGA 482


>gi|53804877|ref|YP_113480.1| hypothetical protein MCA1003 [Methylococcus capsulatus str. Bath]
 gi|53758638|gb|AAU92929.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 554

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 113/378 (29%), Positives = 186/378 (49%), Gaps = 17/378 (4%)

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLI 119
            G++S +P+         + A+  Y+ +        L + P L  G+    V  LR+RL 
Sbjct: 182 AGLESKLPL-----YRNLKAALPRYRGLAENNDVSALALPPKLSPGDRHGEVPALRKRLA 236

Query: 120 ISGDL--DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
             G L  + S      +   +  AV  FQ RHGL P G++   TL A+NVP   R+RQ++
Sbjct: 237 ALGFLWQESSSKEPEVYAGDLVEAVARFQERHGLAPDGVIGKGTLAALNVPPAARLRQIR 296

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAV--ENGKVGLRSTVIVGRVD--RQTPILHS 233
           + L R++ L E+  G  ++LVNIP+  L     +  +  +   V+VGR      TP+ HS
Sbjct: 297 LGLERLRWLPERFEGP-FILVNIPSFRLYGYGQDPERPEVSMNVVVGRSSGGHNTPVFHS 355

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV---FVEEVDWNS 290
            +  ++F PYW +PR+I  K+M+  + +DP YL  +N+ ++   G               
Sbjct: 356 DMTYVVFRPYWNLPRAITVKEMLPGILRDPGYLARHNLELVPSFGNGSQVYEPSLESLEM 415

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
               +   RQ PG  NA+   K  F + +N Y+H TP   LF    R  + GC+RV++ +
Sbjct: 416 LSAGSLKLRQRPGPKNALGLVKFAFPNNDNIYLHGTPSVNLFQRARRDFSHGCIRVQDPV 475

Query: 351 DLDVWLLK-DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
            L  ++LK +  TW++  IEE +   ++  V L   +PV+  Y +  +  D  ++F +DI
Sbjct: 476 GLAEFVLKREGETWTQERIEEAMNGAQSRTVTLKQPLPVYIYYSTVLAEPDGTVRFFEDI 535

Query: 410 YGLDNVHVGIIPLPEDHP 427
           YGLD V   ++     +P
Sbjct: 536 YGLDRVLEQLLEKGFPYP 553


>gi|126726524|ref|ZP_01742365.1| peptidoglycan binding protein, putative [Rhodobacterales bacterium
           HTCC2150]
 gi|126704387|gb|EBA03479.1| peptidoglycan binding protein, putative [Rhodobacterales bacterium
           HTCC2150]
          Length = 535

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 109/395 (27%), Positives = 188/395 (47%), Gaps = 10/395 (2%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           +  S ++ +I        +      L + +        + S        KA    +  + 
Sbjct: 134 LTPSSVNSLIARKAPRRGDQDLLEALMKSNPSRFMKSLVPSSPEYTALLKAKRSLERAIG 193

Query: 91  RGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
             GW P +  + L  G S   V  LR R+I  G L  S   S  +D  +  A++LFQ  +
Sbjct: 194 STGWGPTVRAKSLKPGQSGAEVVALRNRMIRMGYLRKSA--SQKYDTNLTKAIQLFQQDN 251

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL P G+  + T++ +NV  + R++Q+ V + R ++ L   +G R+V VN+       + 
Sbjct: 252 GLLPDGVSGADTIKVVNVSANTRLQQVIVAMER-RRWLNIDLGKRHVFVNLADFRASIIN 310

Query: 210 NGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           NGKV   +  +VG+   DR+TP     +  ++ NP W +PRSI  K+ + +L+++P  + 
Sbjct: 311 NGKVEFSTRAVVGKNISDRRTPEFSDVMTHMIINPTWHVPRSIAVKEYLPMLKKNPGAVS 370

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHD 325
             ++ M+D  G+ V    VD+ +    +F F  +Q P   NA+   K  F +++N Y+HD
Sbjct: 371 --HLRMVDASGRTVSRTNVDFTAYTTKSFPFNLKQPPSNGNALGRVKFMFPNKHNIYLHD 428

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
           TP   LF   VR  + GC+R+ +  D    LL    +  + + +  +KT+  T   L + 
Sbjct: 429 TPAKSLFARNVRAYSHGCIRLADPFDFAYALLSKEMSNGKDYFQRTLKTKVETQYTLKSS 488

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           + VH  Y +AW P    + +R DIYG D +    +
Sbjct: 489 LKVHIDYRTAWVPAKGRVNYRRDIYGRDALIFKAL 523


>gi|307545799|ref|YP_003898278.1| hypothetical protein HELO_3209 [Halomonas elongata DSM 2581]
 gi|307217823|emb|CBV43093.1| hypothetical protein HELO_3209 [Halomonas elongata DSM 2581]
          Length = 546

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 114/379 (30%), Positives = 180/379 (47%), Gaps = 22/379 (5%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP--IRPLHLGNSSVSVQRLRE 116
           V   ID   P        Q  + +A Y++I  +GGWP L     PL  G++   V  LRE
Sbjct: 171 VSAAIDLARPPYEP--YEQLREGLAHYREIKRQGGWPALMNVEDPLRPGDTGTEVTALRE 228

Query: 117 RLII----------SGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           RL             G              +D  +  AV+ FQ  H L   G+V   TL+
Sbjct: 229 RLAAIGNDQLVAADEGYYPTIELQAPEPRVYDEALVEAVRRFQRHHLLADDGVVGPRTLK 288

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A+N+ V+ RI Q++ N+ R + LL   +   +VLV+I    L          R+ ++VG+
Sbjct: 289 ALNMSVERRIDQIRANMERARWLL-HGLPESFVLVDIAGYDLRYFRPNGDTWRARIVVGQ 347

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
             R+TP L S I  +  NP W +P +I+++D++  +R+DP YL   N+ ++   GK++  
Sbjct: 348 PYRRTPSLRSEITHLTINPTWTVPPTIMREDVLPKVRRDPGYLATKNLSVLSPSGKQLDP 407

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
             VDW+   P   + RQ  G  N +    + F + +  Y+HDTP   LF+   R  +SGC
Sbjct: 408 ASVDWS--NPGGVMLRQQAGPNNPLGQLVVRFPNDHLVYLHDTPSRGLFSRSQRALSSGC 465

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           +RV  +++L   L  DT   ++ ++  ++   KT  V LA  VPV   Y +     D  +
Sbjct: 466 IRVEGVLELAQLLFDDTG--TQANVRRLIADGKTRNVLLARHVPVVLHYWTVQPEPDGEL 523

Query: 404 QFRDDIYGLDNVHVGIIPL 422
            FR DIY  D+  +  +  
Sbjct: 524 AFRPDIYDRDDALIEALDR 542


>gi|163746379|ref|ZP_02153737.1| peptidoglycan binding domain protein, putative [Oceanibulbus
           indolifex HEL-45]
 gi|161380264|gb|EDQ04675.1| peptidoglycan binding domain protein, putative [Oceanibulbus
           indolifex HEL-45]
          Length = 583

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 111/367 (30%), Positives = 186/367 (50%), Gaps = 11/367 (2%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRER 117
                   +P  S E  A  ++ I   + +LS+GGW P +P   L  G++   V  LR R
Sbjct: 211 SPAAYFRALPPRSLEYNALLKEKIVM-EKLLSQGGWGPSVPAGKLEPGDTGNDVIALRNR 269

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           LI  G L+ S  +   +DA +  AV+ FQ  HGL+  G+   +T++ +N+ V+ R++ + 
Sbjct: 270 LIAMGYLERSNAVG--YDATLTDAVRQFQEAHGLNTDGVAGPATMKQINIGVEQRLQSVM 327

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRI 235
           V L R +       G R++LVNIP  S + +++GK   ++  +VG  R DR TP     +
Sbjct: 328 VALERER-WFNTDRGKRHILVNIPDFSAKIIDDGKTTFQTRSVVGAAREDRPTPEFSDVM 386

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
             ++ NP W +PRSI+  + +  L+Q+   +   +I + D  G++V    V+++      
Sbjct: 387 EHMVVNPSWYVPRSIVTGEYLPQLKQNRNAVS--HIEITDRSGRKVNRGAVNFSKYTART 444

Query: 296 FIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           F F  RQ P   NA+   K  F ++ N Y+HDTP   LF+  VR  + GCVR+    +  
Sbjct: 445 FPFSMRQPPSNTNALGLVKFMFPNKYNIYLHDTPAKSLFDRDVRAFSHGCVRLAEPFEFA 504

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             LL           + V+++ + T + L  +VPVH +Y +A +      ++RDD+YG D
Sbjct: 505 YALLAPQSADPEGDFQAVLRSGRETRIVLEEQVPVHLIYRTAVTNARGHTEYRDDVYGRD 564

Query: 414 NVHVGII 420
            +    +
Sbjct: 565 ALIWNAL 571


>gi|24373464|ref|NP_717507.1| hypothetical protein SO_1899 [Shewanella oneidensis MR-1]
 gi|24347755|gb|AAN54951.1|AE015633_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 571

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 112/435 (25%), Positives = 212/435 (48%), Gaps = 29/435 (6%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDI---------P 68
            I+   + L+   ++ S+L +  N     +    FD  L +++  I +           P
Sbjct: 137 GIITYAIHLLNGKVNPSMLGKTWNYDEAHLD---FDTTLKQLEEHIKAHTVAEAINGLAP 193

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPS 127
            I+     Q ++ +A Y+D+ +R  +  +P    +  G +S S++ +  RL   G LD +
Sbjct: 194 KITP--YHQLKQYLAHYKDLAARYPFTTIPYTEVIKPGTTSPSIKGIAARLKEQGYLDAN 251

Query: 128 KGLSVA---------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
             +  A         +D  +E+A++ FQ  H L   G++ + T+ A+NVP   R+ Q+++
Sbjct: 252 ATVQDATLVANAPLLYDNILEAAIRQFQADHSLKADGVIGAGTMAALNVPYAQRVEQIRI 311

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           NL R +  L   +   Y++VN+    L   ++  +  R+ +I+G++D +TP+  S++  +
Sbjct: 312 NLERAR-WLSANLSANYLIVNLAGYELLLFKDNNLSWRTDIIIGKIDSKTPLFKSKLKYV 370

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI- 297
           + NP W +P SI   +++   R+DP YL   +  +++  G  V    +DW+S    NF  
Sbjct: 371 VVNPTWTVPNSIST-EIINHQRKDPDYLHKKHFKVVESSGTPVDASGIDWHSMTRKNFPY 429

Query: 298 -FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
            F Q+PG  N++   K  F ++ + Y+HDTP   LF+   R  + GC+RV++ + L   L
Sbjct: 430 WFVQEPGADNSLGLVKFIFPNQYSIYLHDTPSKNLFDKTDRAFSHGCIRVKDPLVLADKL 489

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           L     WS   +   +   KT  + L   + +  +Y +A   K+  I+F +D+Y  D V 
Sbjct: 490 LSANANWSSETLNNKLAEGKTENLFLDEPLDILIMYWTATI-KNGKIKFYNDVYTRDPVL 548

Query: 417 VGIIPLPEDHPIDSD 431
           +  +  P    + +D
Sbjct: 549 IEALNRPTYEGVLAD 563


>gi|325981933|ref|YP_004294335.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
 gi|325531452|gb|ADZ26173.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
          Length = 543

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 112/409 (27%), Positives = 201/409 (49%), Gaps = 18/409 (4%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IA 76
           +L +   L      A+  D   +          F    A     ++  +  +S +T    
Sbjct: 130 VLKLATDLSRGRFSATATDPDWHIPRADFDAVAFLQ-AAIYAGHLEDSLQKLSPQTLNYQ 188

Query: 77  QTEKAIAFYQDILSR-GGWPELPIRP-LHLGNSSVSVQRLRERLI----ISGDLDPS--K 128
             ++ +A YQ +L     W  +P  P L  G++  S+  +R+R+       G L+ +   
Sbjct: 189 LLKRTLAHYQILLKNTPEWIRIPSSPSLRPGDTYPSIPLIRQRIAQAYAADGLLEFNLIP 248

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
             +  +D  + +A+K FQ +HGL+  G++  +T+ A+N+P++ +IRQL++N+ R++  L 
Sbjct: 249 NANQLYDTELVAAIKAFQAQHGLNTDGIIGKNTINALNIPLEWKIRQLRINMERLR-WLP 307

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           + +G R++LVN     L A+EN +  L   +IVGR  R TP  +  ++ ++ NPYW +P 
Sbjct: 308 RNLGQRHLLVNTAGFYLTAIENDEPVLNMRIIVGRDYRSTPSFNGTLSHMVLNPYWNVPA 367

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPP-NFIFRQDPGK 304
           SI +KD++   +QDP Y       +    +   + +    +DW+  +    +  RQDPG 
Sbjct: 368 SIARKDLLPKQQQDPTYFTTAGFKVYPAQERGAQAIDPGMIDWHELKQRFPYFLRQDPGT 427

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   K  F +  + Y+HDTP   LF   +R  +SGC+R+    +L  + L   P+  
Sbjct: 428 HNALGKIKFMFSNPFSIYLHDTPSKSLFRKDIRTFSSGCIRLEKPFELAAFALN-QPSLP 486

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                  +++ KT    L   +P++ VYI+AW+ +   + F  DIY  D
Sbjct: 487 -EKFSADLESDKTITTHLPKPLPIYLVYITAWADEHHKVYFYPDIYDRD 534


>gi|213160796|ref|ZP_03346506.1| hypothetical protein Salmoneentericaenterica_12358 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
          Length = 397

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 111/377 (29%), Positives = 169/377 (44%), Gaps = 49/377 (12%)

Query: 83  AFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD---------------- 125
           A  + +     WP+L     L  G  S  V  LRE L  +G LD                
Sbjct: 6   ALLKLVADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPGDNTSDSA 65

Query: 126 -------------------------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
                                         + A+D  +  AVK FQ   GL   G++  +
Sbjct: 66  VVSPSAVVDETSVAQPVDEPTARRSKPAPAARAYDRELVEAVKRFQAWQGLGADGVIGPA 125

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG   L S VI
Sbjct: 126 TRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQVLASRVI 183

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   ++     +
Sbjct: 184 VGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSK 243

Query: 281 --VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
             +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP   LF    
Sbjct: 244 EAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDA 303

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+  Y++A+
Sbjct: 304 RALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAF 362

Query: 397 SPKDSIIQFRDDIYGLD 413
              D  +Q+R DIY  D
Sbjct: 363 VGADGRMQYRTDIYNYD 379


>gi|254487232|ref|ZP_05100437.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
 gi|214044101|gb|EEB84739.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
          Length = 516

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 117/374 (31%), Positives = 190/374 (50%), Gaps = 11/374 (2%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVS 110
             +F+    M    ++   + E  A   + +   + +L+ GGW P +    L  G    +
Sbjct: 137 LTDFIKSDPMPFLRNLRPRTMEYNALMREKLEM-EKLLATGGWGPVVSASTLKPGAQGAA 195

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  LR RLI  G L  + G+S  +DA +E+AV+ FQ  HGL+  G+  S T+  +N  V+
Sbjct: 196 VVSLRNRLIRMGYLKRTNGIS--YDATMEAAVREFQKDHGLNTDGVAGSGTITELNKSVE 253

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQT 228
            R++ + V + R +  L ++ G R+VLVNIPA +   ++NG+V   +  +VG  +  R T
Sbjct: 254 TRLKSVIVAMERER-WLNKERGARHVLVNIPAFTAAIIDNGRVTFETKSVVGATKDGRYT 312

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P     +  I+ NP W +PRSI+ K+ +  ++ +P      +I +ID  G+ V    V++
Sbjct: 313 PEFSDTMEYIVINPTWNVPRSIVTKEYLPSMKNNPN--AAGHIDLIDRSGRIVPRGAVNF 370

Query: 289 NSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           +S     F F  RQ PG+ NA+   K  F ++ N Y+HDTP   LF   +R  + GCVR+
Sbjct: 371 SSYTEQTFPFSMRQRPGRSNALGLVKFIFPNKYNIYLHDTPSKSLFARDMRAFSHGCVRL 430

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
            +  D    LL    +      +  + T + T V L  E+PVH +Y +A++      Q+R
Sbjct: 431 ADPFDFAYTLLAAQTSDPVGFFKSKLATGRETFVHLDNELPVHLIYRTAFTTPRGHTQYR 490

Query: 407 DDIYGLDNVHVGII 420
            DIYG D      +
Sbjct: 491 ADIYGRDAKIWNAL 504


>gi|126736346|ref|ZP_01752088.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           CCS2]
 gi|126714167|gb|EBA11036.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           CCS2]
          Length = 536

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 116/410 (28%), Positives = 182/410 (44%), Gaps = 14/410 (3%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPII--SKETIAQ 77
           L     +    +  S +D  I+      V  R     A       + +  +  S     +
Sbjct: 124 LDYARDIQTGLLTPSRIDSAIH--RQVPVRSRLSTMRAFAQSNPSAFMRALAPSAPEYTR 181

Query: 78  TEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
                   + ++ +GGW P +P R    G+S   V  LR RLI  G L  +   +  +D 
Sbjct: 182 LMSEKMRMERLIGQGGWGPTVPGRKYERGDSGAGVVALRNRLIAMGYLPRTN--TQTYDD 239

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +  A+  FQ  HGL   G   + TL+ +NV  + R+R + V + R +  + +  G R+V
Sbjct: 240 AIYGAITRFQQAHGLAIDGTAGAGTLDEINVQPEARLRSIIVAMERER-WINRPRGERHV 298

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQ--TPILHSRINRIMFNPYWVIPRSIIQKD 254
            VNI   + +  +NG     +  +VG  DR   TP     +  ++ NP W +PRSII K+
Sbjct: 299 WVNITDFTAKIYDNGVETFSTRSVVGARDRDRVTPEFSDVMEFMVINPSWYVPRSIITKE 358

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTK 312
            +  L+ +P  +   N+ + D  G+ V     D++   P NF   FR+ P + NA+   K
Sbjct: 359 FLPQLQANPNAV--RNLVITDRNGRVVDRSTADFSQYTPTNFPYSFREPPSQGNALGLVK 416

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F +R N Y+HDTP   LF    R  + GCVR+ +  D    LL           +  +
Sbjct: 417 FMFPNRYNIYLHDTPSKSLFGRETRAYSHGCVRLADPFDFAYALLARQVGNPEEVFQGHL 476

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           ++ +   V L T VPVH VY +A  P D  +QFR D+YG D      +  
Sbjct: 477 RSGRERRVDLETPVPVHLVYRTAIVPADGKVQFRRDVYGRDGRIWNALAR 526


>gi|83952122|ref|ZP_00960854.1| peptidoglycan binding protein, putative [Roseovarius nubinhibens
           ISM]
 gi|83837128|gb|EAP76425.1| peptidoglycan binding protein, putative [Roseovarius nubinhibens
           ISM]
          Length = 523

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 111/410 (27%), Positives = 199/410 (48%), Gaps = 14/410 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEII--NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
            +L +   L    +  + +D  I     Y S V     NF      G    +P  + E  
Sbjct: 109 TMLLLARDLQTGMLVPAKVDREIVRQVPYRSRVAH-LTNFSTSNPRGFFRSLPPKNAEYS 167

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
               + +   + ++ +GG+ PE+P + L  G S  +V  +R RL+I G +  S   S  +
Sbjct: 168 RLLREKL-RLEALMLQGGFGPEVPAKSLKRGQSGPAVVAMRNRLVIMGFMPRSA--SQEY 224

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA +  AV+ FQ  HGL   G   ++T+  +N  V+ R++ + V + R +  + Q  G R
Sbjct: 225 DAKLAEAVQAFQAAHGLVADGDAGAATVAEINTSVETRLKSILVAMERER-WINQPRGDR 283

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +VLVN+   S   V++ +V  ++  ++G    DR++P     +  +  NP W +PRSI  
Sbjct: 284 HVLVNLTDFSARIVDHDEVTFQTRAVIGLNDSDRRSPEFSDVMEYMEINPTWNVPRSITV 343

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
           K+ +  ++++P      ++ + + +G++V    V++N+     F F  +Q P   NA+  
Sbjct: 344 KEYLPQMQRNPN--AAGHLKLYNSRGQQVSRANVNFNAYTARTFPFALKQPPSNRNALGL 401

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP   LF    R  + GC+R+++  D    LL       +     
Sbjct: 402 VKFMFPNKYNIYLHDTPAKSLFQRNKRDFSHGCIRLQDPFDFAYALLARQEEDPKGFFHR 461

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           V+ T + T V+L  +VPVH +Y +A++     +Q+R+D+YG D      +
Sbjct: 462 VLNTGQQTQVRLKKQVPVHIIYRTAFTQAKGPMQYRNDVYGRDARIWSAL 511


>gi|330830685|ref|YP_004393637.1| cell wall degradation protein [Aeromonas veronii B565]
 gi|328805821|gb|AEB51020.1| Cell wall degradation protein [Aeromonas veronii B565]
          Length = 494

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 127/374 (33%), Positives = 184/374 (49%), Gaps = 22/374 (5%)

Query: 61  MGIDSDIPIISKE-------TIAQTEKAIAFYQDILSR----------GGWPELPIRPLH 103
           + +D + P++++         +      +A Y+ + ++            WP L +  L 
Sbjct: 117 LKLDLNRPVVTQPSDDDLLTQVKSLRPQVAEYEAVRAKVHKLLAMPMASKWPTLDMPTLR 176

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G SS  + ++R  L   GD  PS G    +D   E A+K FQ RHGL   G++   T  
Sbjct: 177 AGESSAELGQIRAMLNELGDSAPSHG-DQIYDGDTEQAIKQFQRRHGLTADGIIGRQTRS 235

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            +N    +R   L  NL R + L++Q  G RYVLVNIP   L  VE+G     S VIVG+
Sbjct: 236 WLNTGPQVRASLLLRNLWR-RDLVDQLAGGRYVLVNIPDYRLSVVESGNEVFTSRVIVGK 294

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
             R TPIL S I  I+ NP W +PRSI+ KD++  L +DP YL      +ID +G  V  
Sbjct: 295 EQRATPILASEIRSIVLNPSWHVPRSILSKDILPKLGRDPAYLSREQFEVIDSEGNPVQF 354

Query: 284 EEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
            E  W+      F +  RQ PG  NA+   K    + +  Y+H TP   LF    R  +S
Sbjct: 355 TEEGWHQALAAGFPYRLRQKPGDHNALGRYKFYLPNNDAIYLHSTPRKALFEQGARAFSS 414

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GC+RV +  DL   LL D+  +    +  ++K  +T  + L T +PV  VY S+W  ++ 
Sbjct: 415 GCIRVEHADDLAELLLADS-RYQPDKVANILKESQTKWLPLTTPIPVFTVYWSSWIDENG 473

Query: 402 IIQFRDDIYGLDNV 415
             Q R+DIYG D V
Sbjct: 474 RQQLRNDIYGFDRV 487


>gi|254454682|ref|ZP_05068119.1| hypothetical protein OA238_5313 [Octadecabacter antarcticus 238]
 gi|198269088|gb|EDY93358.1| hypothetical protein OA238_5313 [Octadecabacter antarcticus 238]
          Length = 535

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 183/371 (49%), Gaps = 11/371 (2%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQR 113
           FLA       + +P  S E      + ++  + +L++GGW P +    L +G S V+V  
Sbjct: 159 FLASTPASYLATLPPNSPEYARLLREKMSL-ERLLAQGGWGPAVSSGSLAVGASGVAVVA 217

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           LR+RL+  G ++ S   +  +DA ++ AV+ FQ  HGL   G   + TL  +NVP   R+
Sbjct: 218 LRDRLVAMGYMERSA--TQIYDATIQEAVQRFQQTHGLAEDGEAGAGTLTEINVPAASRL 275

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPIL 231
           +Q+ V + R +  + +  G R+V VN+   S   ++N +V  ++  ++G    +RQTP  
Sbjct: 276 QQIIVAMERER-WMNRPRGERHVWVNLVDFSAAIMDNDRVTFQTRSVIGATGSNRQTPEF 334

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
              +  ++ NP W +PRSI+  + +  L+ +   +   +I + D  G+ +    V+++  
Sbjct: 335 SDVMEYMVINPSWYVPRSIVVNEYLPALQSNRNAVS--HIEITDSNGRAINRSNVNFSQF 392

Query: 292 EPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
               F +  RQ P + NA+   K  F ++ N Y+HDTP   LF   VR  + GC+R+ + 
Sbjct: 393 NSRTFPYSMRQPPSRGNALGLVKFIFPNQYNIYLHDTPAKSLFGREVRAFSHGCIRLNDP 452

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
            D    LL           +  + T + T V L   VPVH VY +A++     + FR D+
Sbjct: 453 FDFAYALLAAQEDDPEGVFQSHLDTGRETRVNLDEPVPVHLVYRTAFTHTTGQLNFRRDV 512

Query: 410 YGLDNVHVGII 420
           Y  D+     +
Sbjct: 513 YDRDSRIWDAL 523


>gi|260575117|ref|ZP_05843118.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sp. SW2]
 gi|259022739|gb|EEW26034.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sp. SW2]
          Length = 531

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 111/409 (27%), Positives = 193/409 (47%), Gaps = 14/409 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IA 76
           +L     L    +  S +D  I       V+DR  N +A       + +  ++       
Sbjct: 118 LLDYARDLQTGALVPSEIDPGIK--REVPVHDRHANLVAFETGNPVAFLRGLAPTATAYP 175

Query: 77  QTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           Q  KA    +  ++ GGW   +P   L  G    +V  LR+RLI  G L  +   +  +D
Sbjct: 176 QLMKAKLDLEAQIASGGWGAAVPSGALKPGQDGPAVVALRDRLIRMGYLHRTA--TAIYD 233

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A ++ AV+ FQ+ HGL   G+  + T+E +N+  + R + + V + R +  +    G R+
Sbjct: 234 ADMQKAVQAFQLAHGLTADGVAGTGTIEQINIGPEARWQSVVVAMERER-WMNIDRGHRH 292

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           + VN+   + + +++GKV   S  ++G+   DR++P     +  ++ NP W +PRSI  +
Sbjct: 293 IWVNLTDFTAKIIDDGKVTFTSRSVIGKNAADRRSPEFSDMMEFMVINPSWSVPRSITTR 352

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           + + +++++P      ++ +ID  G+ V    VD+      NF F  RQ P   NA+   
Sbjct: 353 EYLPMMQRNPN--AAGHLKLIDRAGRVVSRASVDFTRYTAANFPFAMRQAPSSGNALGLV 410

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F +  N Y+HDTP   LF N VR  + GC+R+ +  D    LL       +   E+ 
Sbjct: 411 KFMFPNPYNIYLHDTPSKSLFANEVRDFSHGCIRLGSPFDFAYALLARQTDDPKGLFEQH 470

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +     + + LA  VPVH VY +A+      + +R D+YG D +    +
Sbjct: 471 LNGGGESRLDLAAPVPVHLVYFTAFPGAKGQMNYRRDVYGRDALIFDAL 519


>gi|254462001|ref|ZP_05075417.1| peptidoglycan-binding domain 1 [Rhodobacterales bacterium HTCC2083]
 gi|206678590|gb|EDZ43077.1| peptidoglycan-binding domain 1 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 536

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 107/408 (26%), Positives = 189/408 (46%), Gaps = 10/408 (2%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
           + L     L    +  S +D  I           +     +        +        A+
Sbjct: 122 IFLQYSRDLQTGVLTPSKVDREIVRQVPLRDRVSYLTNFTKSSPKRFFQVLAPKAPEYAR 181

Query: 78  TEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             K     +  L++GGW  ++P + L  G +  +V  LR RL + G L  S   S  +DA
Sbjct: 182 LMKTKLMMERQLAKGGWGQKVPQKSLKPGQTGNAVVILRNRLQVMGYLKRS--SSQTYDA 239

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            ++SA++ FQ+  GL+P G+    T+  +N P++  ++ + V + R +  + +  G R++
Sbjct: 240 AMQSAMQQFQLSRGLNPDGIAGPGTMAEINRPIESHLQAIMVAMERER-WMNRPRGKRHI 298

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            VN+   S   ++NGK   RS  ++G+   DR++P     +  ++ NP W +PRSI  K+
Sbjct: 299 WVNLTDFSATIIDNGKESFRSRSVIGKNQRDRRSPEFSDVMEFLVVNPTWNVPRSIATKE 358

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            + LL+++P  +   ++ ++D +G+ V     ++       F F  +Q P   NA+   K
Sbjct: 359 YLPLLKKNPNAV--GHLRIVDSRGRTVSRSAANFGEYSAKTFPFSIKQPPSNSNALGLVK 416

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F +R+N Y+HDTP   LF+  VR  + GC+R+    +    LL    +  +   +  +
Sbjct: 417 FMFPNRHNIYLHDTPAKNLFSREVRAYSHGCIRLHQPFEFAYALLAKQTSDPKGFFQSKL 476

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            T   T V L   VPVH VY +A+   +    +R DIYG D      +
Sbjct: 477 STGTETQVNLNAPVPVHIVYRTAFVTANGTANYRRDIYGRDAKIFAAL 524


>gi|307825667|ref|ZP_07655884.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
 gi|307733244|gb|EFO04104.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
          Length = 574

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 125/439 (28%), Positives = 212/439 (48%), Gaps = 43/439 (9%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ------ 77
           L+L +  +  S+L   +++ ++  VN +  NF  ++      D+P++ K+++AQ      
Sbjct: 123 LALYDTALSISLL-RFLHDLHYGRVNPQGINFNLKLREKKLIDLPLLIKDSLAQNNLAQL 181

Query: 78  -------------TEKAIAFYQDILSRGGWPELPIR-----PLHLGNSSVSVQRLRERLI 119
                         ++A+A Y+ + +      +P +      LH G S   +  LR  L 
Sbjct: 182 PLSLEPQFKQYQKLKQALANYRQLAAI----AVPFKLDVKETLHPGESHPQIAELRRFLT 237

Query: 120 ISGDLDP-----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
             GDL       S   S  +   + + VK FQ RHGL   G +   ++ A+NVP++ R+ 
Sbjct: 238 TVGDLPDDKTVISAEKSSLYTDAIVTGVKAFQKRHGLTADGNIGKGSVAALNVPLNYRVT 297

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN----GKVGLRSTVIVGRV-DRQTP 229
           QL++ + R++ L E  +G   ++VNIPA  L A ++        +   V+VG     QTP
Sbjct: 298 QLELAMERLRWLPELNVGAS-IIVNIPAFQLWAFDSIDQPDANIVNMRVVVGNALKTQTP 356

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH---MIDEKGKEVFVEEV 286
           +L + ++ I F PYW +P SII+ +++  L Q+  YL   N+    +  +  K   + + 
Sbjct: 357 VLMAEMHFIDFMPYWNVPYSIIKNEILPKLIQNSNYLDKENMEMVSVFRDGEKPTALNQE 416

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
             N  +      RQ PG  NA+   K  F ++++ Y+HDTP   LF+   R  + GCVRV
Sbjct: 417 TMNLLKEGKLRIRQRPGGKNALGKVKFIFPNKDDVYLHDTPANALFSKSRRDFSHGCVRV 476

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
            N   L  + LK+   W+   I+  + T K   V L   +PV F Y +A+  +   ++F 
Sbjct: 477 ANPQKLAEFALKNQDNWNAETIQLAMNTPKMQRVILKKPIPVLFFYTTAFFDQYDNLEFY 536

Query: 407 DDIYGLDNVHVGIIPLPED 425
            DIYG D V +G +  P+D
Sbjct: 537 PDIYGHDAVLLGALSKPDD 555


>gi|317047572|ref|YP_004115220.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
 gi|316949189|gb|ADU68664.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
          Length = 602

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 124/481 (25%), Positives = 195/481 (40%), Gaps = 94/481 (19%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+            LY    Y +    ++             +IN+  +++     
Sbjct: 132 MLGYLQFVSNVPTQGETWLYSNVPYKMAMPTVA-------------VINQWQNAVNGGGS 178

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSV 111
             F+  ++               A    A+     +     WP+L     L  G  S  V
Sbjct: 179 RAFVLSLEPQ---------HPQYAPMHAALKTL--LNDNRPWPQLRDSGTLKPGQISNDV 227

Query: 112 QRLRERLIISGDLD---------------------------------------------- 125
             LRE L  +G L                                               
Sbjct: 228 PALREILQRTGMLSGHSATPTPADDAVPVAPVPVSQSAQPVAVSPSAASVNDLSAQAPQA 287

Query: 126 -------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
                  P +  +  +D  +   VK FQ   GL   G +   T E +NV   +R   L +
Sbjct: 288 PGNVAANPVQSANNVYDNALVEGVKRFQHWQGLADDGAIGPRTREWLNVSPQMRAALLAL 347

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           N+ R++ LL   M    ++VNIP  SL    NG   L S VIVGR DR+TP++ S +N +
Sbjct: 348 NIQRLR-LLPDDMH-NGIMVNIPNYSLTYYNNGATILSSRVIVGRPDRKTPLMRSALNNV 405

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPN 295
           + NP W +P S++++D++  ++QDP YL  +   ++       + +    +DWN     +
Sbjct: 406 VLNPPWNVPTSLVRQDIVPKVKQDPGYLYKHGYTLLSGWSADAQVIDPSSLDWNMVSAAS 465

Query: 296 FIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           F +  RQ PG +N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    +L 
Sbjct: 466 FPYRIRQAPGAMNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELA 525

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             LL+D   W+   I + +K   T  V +   +PV+  Y++AW   D   Q+R DIY  D
Sbjct: 526 DLLLQDA-GWNDSRISDTLKEGNTRYVPIRHRIPVNLYYLTAWVADDGQPQYRTDIYNYD 584

Query: 414 N 414
           N
Sbjct: 585 N 585


>gi|170750306|ref|YP_001756566.1| peptidoglycan binding domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656828|gb|ACB25883.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 595

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/359 (36%), Positives = 191/359 (53%), Gaps = 11/359 (3%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELP--IRPLHLGNSSVSVQRLRERLIISGDLD 125
           P ++  T   T +A   Y      GGW  LP  +  L  G    ++  LR  L ++GDL 
Sbjct: 159 PTLTSRTFLDTLRAAERYAAFAEAGGWERLPEDLARLKPGERHPAIPALRHHLTLTGDLP 218

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                +   D  + +A+  FQ RHGL  SG++   T+ A+NVP  +R RQL  +  R+  
Sbjct: 219 ADAPPNDRLDPPLVAAIAAFQARHGLPDSGVLGRLTINALNVPAAVRQRQLAASAARLMG 278

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
             +   G RYV+VNIP+A++EAVENG V  R   +VG  D+ TP + +RI  I FNP W 
Sbjct: 279 -SKFPFGERYVVVNIPSAAVEAVENGAVARRYVAVVGSPDKATPPVETRITDINFNPTWT 337

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P S+++ +++  +R++P YL  N+I ++   G EV    +DW   +  N+  RQDPG  
Sbjct: 338 VPASVVKNEIIPQMRRNPGYLAKNHIRILSPSG-EVDPTRIDWAGEKAVNYTLRQDPGFD 396

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT--- 362
           N++   +I+  +R   YMHDTP   LF   VRF + GCVRV  + +L  WLL+ T     
Sbjct: 397 NSLGQVRIDMPNRFAVYMHDTPAKSLFAASVRFHSHGCVRVGQVKELVGWLLQGTDGPNG 456

Query: 363 ----WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
               W    IE  +   +   +KLA  +PV FVY++ ++  D    FRDDIY LD    
Sbjct: 457 PGTSWGPIEIETGIADGERRDIKLAKPIPVTFVYLTGYATPDGKAHFRDDIYNLDTPAA 515


>gi|117920121|ref|YP_869313.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117612453|gb|ABK47907.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. ANA-3]
          Length = 560

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 113/432 (26%), Positives = 210/432 (48%), Gaps = 24/432 (5%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDI-------PII 70
            I+   + L+   ++ S+L +  N     +    FD  L +++  I +            
Sbjct: 127 GIITYAIHLLNGKVNPSMLGKTWNYDETHLD---FDTTLKQLEEHIKAHTVADAIAGLAP 183

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
             E   Q ++ +A Y+D+ +R  +  +P    +  G++S SVQ +  RL   G L  S  
Sbjct: 184 KIEPYHQLKQYLAQYKDLAARYPFSPIPYTEVIKPGSTSPSVQGIATRLTELGYLAASAP 243

Query: 130 LSV--------AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
                       +D+ +E+AV+ FQ  H L   G++ + T+ A+NVP    + Q+++NL 
Sbjct: 244 ADNSAAVNQPLTYDSTLEAAVRQFQTDHSLKADGVIGAGTMAALNVPYSQLVDQIRINLE 303

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R +  L   +   Y++VN+    L   ++  +  R+ +I+G+++ +TP+  S++  ++ N
Sbjct: 304 RAR-WLSANLPTNYLIVNLAGYELLLFKDNSLSWRTDIIIGKINAKTPLFKSKLKYVVVN 362

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FR 299
           P W +PRSI   +++  LR++P YL+  +  +++  G  V    +DW+S    NF   F 
Sbjct: 363 PTWTVPRSIST-EIINHLRKEPDYLQKKHFKVVEGSGTPVDASGIDWHSMTRKNFPYWFV 421

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           QDPG+ N++   K  F ++ + Y+HDTP   LF    R  + GC+RV++ + L   LL  
Sbjct: 422 QDPGEDNSLGLVKFIFPNQYSIYLHDTPAKSLFEQTDRAFSHGCIRVKDPLVLADKLLSA 481

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
              WS   +   +   KT  + L   + +  +Y +    KD  I+F +D+Y  D V +  
Sbjct: 482 NANWSSSTLSSKLSEGKTENLFLDEPLDILIMYWTVTL-KDGKIKFYNDVYKRDPVLIEA 540

Query: 420 IPLPEDHPIDSD 431
           +  P    + +D
Sbjct: 541 LNRPTYEGVLAD 552


>gi|22126641|ref|NP_670064.1| hypothetical protein y2763 [Yersinia pestis KIM 10]
 gi|45441013|ref|NP_992552.1| hypothetical protein YP_1186 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51595771|ref|YP_069962.1| hypothetical protein YPTB1431 [Yersinia pseudotuberculosis IP
           32953]
 gi|108806698|ref|YP_650614.1| hypothetical protein YPA_0701 [Yersinia pestis Antiqua]
 gi|108812731|ref|YP_648498.1| hypothetical protein YPN_2570 [Yersinia pestis Nepal516]
 gi|149366664|ref|ZP_01888698.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|167470672|ref|ZP_02335376.1| hypothetical protein YpesF_22997 [Yersinia pestis FV-1]
 gi|170024879|ref|YP_001721384.1| hypothetical protein YPK_2654 [Yersinia pseudotuberculosis YPIII]
 gi|186894850|ref|YP_001871962.1| hypothetical protein YPTS_1533 [Yersinia pseudotuberculosis PB1/+]
 gi|218928555|ref|YP_002346430.1| hypothetical protein YPO1407 [Yersinia pestis CO92]
 gi|229841379|ref|ZP_04461538.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843484|ref|ZP_04463630.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229895858|ref|ZP_04511028.1| predicted carboxypeptidase [Yersinia pestis Pestoides A]
 gi|229903136|ref|ZP_04518249.1| predicted carboxypeptidase [Yersinia pestis Nepal516]
 gi|284988613|ref|YP_001401528.2| hypothetical protein YpsIP31758_2563 [Yersinia pseudotuberculosis
           IP 31758]
 gi|21959653|gb|AAM86315.1|AE013879_5 putative amidase [Yersinia pestis KIM 10]
 gi|45435872|gb|AAS61429.1| putative exported protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589053|emb|CAH20671.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
 gi|108776379|gb|ABG18898.1| hypothetical protein YPN_2570 [Yersinia pestis Nepal516]
 gi|108778611|gb|ABG12669.1| hypothetical protein YPA_0701 [Yersinia pestis Antiqua]
 gi|115347166|emb|CAL20059.1| putative exported protein [Yersinia pestis CO92]
 gi|149291038|gb|EDM41113.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|169751413|gb|ACA68931.1| Peptidoglycan-binding domain 1 protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186697876|gb|ACC88505.1| Peptidoglycan-binding domain 1 protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229678906|gb|EEO75009.1| predicted carboxypeptidase [Yersinia pestis Nepal516]
 gi|229689831|gb|EEO81892.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697745|gb|EEO87792.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700781|gb|EEO88810.1| predicted carboxypeptidase [Yersinia pestis Pestoides A]
 gi|320015731|gb|ADV99302.1| putative carboxypeptidase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 618

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 123/470 (26%), Positives = 197/470 (41%), Gaps = 60/470 (12%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHS---IVN 49
           M+GYL          +  LY    Y +     +++        ++E    SY +     +
Sbjct: 138 MLGYLHFISGVGANGSVWLYSNVPYKMAMPPAAVLN--AWQKAVNEGSTASYLASLAPQH 195

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKA-----IAFYQDILSRGGW--PELPIR-P 101
            ++D     + + +    P     T            I   ++IL R G   P  P++ P
Sbjct: 196 PQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQLSDDIPALREILDRTGMLHPTTPVKAP 255

Query: 102 LHLGNSSVSVQRLRERLII-----------------------SGDLDPSKG--------L 130
             +   + +V  + + L +                       S D  P+           
Sbjct: 256 EVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVSPSAVSVPESDDAAPAPMPPVSVVTLT 315

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
              +   +  AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L    
Sbjct: 316 DNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGHV 375

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIP  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S+
Sbjct: 376 --DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSL 433

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPGKI 305
           +++D++   R D  Y + N   ++     +   +    +DW+   P NF +  RQ PG  
Sbjct: 434 VRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGAN 493

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 494 NSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWND 552

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             +   VK   TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 553 ARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 602


>gi|117619072|ref|YP_855763.1| cell wall degradation protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560479|gb|ABK37427.1| cell wall degradation protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 433

 Score =  404 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 126/395 (31%), Positives = 180/395 (45%), Gaps = 14/395 (3%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
            + LV +    ++   +     H    D     + ++   +                + +
Sbjct: 44  AMDLVSREQMQTLKLNLNKPLAHEPAGDNLLEQVRQLRPQVA---------EYDAVREEV 94

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
                +     WP L +  L  G  S  + ++R  L   GD  P +     +DA    AV
Sbjct: 95  RKLLALPMAKKWPTLTMPTLRAGEVSPELGQIRSILNELGDTAP-RHDDATYDAETLQAV 153

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           K FQ RHGL   G++   T   +N   ++R   L  NL R + L++Q  G RYVLVNIP 
Sbjct: 154 KQFQRRHGLTADGIIGRQTRSWLNTGPEVRASLLLRNLWR-RDLVDQLSGARYVLVNIPD 212

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L  VE+G     S VIVG+  R TPIL S I  I+ NP W +PRSI+ KD++  L +D
Sbjct: 213 YRLSVVESGNEVFTSRVIVGKEQRATPILASEIRSIVLNPAWHVPRSILSKDILPKLGRD 272

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P YL      +ID +G  V   E  W       F +  RQ PG  NA+   K    +   
Sbjct: 273 PAYLNREQFEVIDGEGNPVQFTEEGWQQALASGFPYRLRQKPGDHNALGRYKFYLPNNEA 332

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+H TP   LF    R  +SGC+RV +  DL   LL D+  +    +  ++K  +T  +
Sbjct: 333 IYLHSTPRKALFEQGARAFSSGCIRVEHADDLAELLLADS-RYQPDKVASILKETQTKWL 391

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            L T +PV  VY S+W  +D   Q R+DIYG D V
Sbjct: 392 PLTTPIPVFTVYWSSWIDEDGRQQLRNDIYGFDRV 426


>gi|145298228|ref|YP_001141069.1| hypothetical protein ASA_1213 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851000|gb|ABO89321.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 494

 Score =  404 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 122/395 (30%), Positives = 181/395 (45%), Gaps = 14/395 (3%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
            + LV +    ++   +     H  V D   + + ++   +                + +
Sbjct: 105 AMDLVAREQMQTLKLNLNQPLAHEPVGDNLLDQVKQLRPQVA---------EYESVREEV 155

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
                +     WP L +  L  G +S  + ++R  L   GD    +     +D   + A+
Sbjct: 156 RKLLAMPMAKQWPTLTMPTLRAGEASPELGQIRTILNELGD-GAPRHDDATYDVDTQQAI 214

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           K FQ RHGL   G++   T   +N    +R   L  NL R + L++   G RYVLVNIP 
Sbjct: 215 KQFQRRHGLTADGIIGRQTRTWLNTGPQVRASLLLRNLWR-RDLVDHLSGARYVLVNIPD 273

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L  VE+G     S VIVG+  R TPIL S I  I+ NP W +PRSI+ KD++  L +D
Sbjct: 274 YRLSVVESGNEVFTSRVIVGKEQRATPILASEIRSIVLNPPWHVPRSILSKDILPKLGRD 333

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           P YL      +ID +G  V   E  W       F +  RQ PG  NA+   K    + + 
Sbjct: 334 PAYLNREQFEVIDGEGNPVQFTEEGWYQALAAGFPYRLRQKPGDHNALGRYKFYLPNNDA 393

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+H TP   LF    R  +SGC+RV +  DL   LL D+  +    +  ++K  +T  +
Sbjct: 394 IYLHSTPRKALFEQGARAFSSGCIRVEHADDLAELLLADS-RYQPDKVASILKNTQTKWL 452

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            L T +PV  VY S+W  ++   Q R+DIYG D V
Sbjct: 453 PLTTPIPVFTVYWSSWIDEEGRQQLRNDIYGFDRV 487


>gi|238792383|ref|ZP_04636017.1| Peptidoglycan-binding domain 1 protein [Yersinia intermedia ATCC
           29909]
 gi|238728309|gb|EEQ19829.1| Peptidoglycan-binding domain 1 protein [Yersinia intermedia ATCC
           29909]
          Length = 603

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 125/489 (25%), Positives = 196/489 (40%), Gaps = 68/489 (13%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHS---IVN 49
           M+GYL          +  LY    Y +     +++ +      + E     Y +     +
Sbjct: 116 MLGYLHFISGVGANGSVWLYSNVPYKMAMPPATILNR--WQQAVREGTTAPYLASLAPQH 173

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKA-----IAFYQDILSRGG-WPELPIRPLH 103
            ++D     + + +    P                  I   + IL R G    +  +P  
Sbjct: 174 PQYDKMHQALKLMLADRQPWPQMSNGPSLRPGQLSDDIPALRKILDRTGMLHPVASQPAK 233

Query: 104 ----LGNSSVSVQ--------------RLRERLII---------------SGDLDPSKG- 129
               +   + SV                L   L++               +GD+      
Sbjct: 234 APEVIPVDNPSVAVVNDDLSVDEEKSRALAHSLVVSPSAAPVADASVAGATGDVAAPSSA 293

Query: 130 ------LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
                     +   +  AVK FQ  HGL   G++   T E +NV    R   L +N+ R+
Sbjct: 294 PLTVTITDNIYTPELVEAVKRFQQWHGLSDDGVIGVRTREWLNVSPQTRATLLALNIQRL 353

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + L  +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP 
Sbjct: 354 RILPGRV--DNGIMVNIPNYSLNYYKNGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPP 411

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF-- 298
           W +P S++++D++   R D  Y + +   ++     E   V    +DW+   P NF +  
Sbjct: 412 WNVPTSLVRQDIVPKARYDAGYFQRHGYTVLSGWSNEAEVVDPSMIDWSMISPNNFPYRL 471

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+
Sbjct: 472 RQAPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQ 531

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHV 417
           D   W+   +   +K   TT V +   VPV   Y++AW   D   QFR DIY  D  V  
Sbjct: 532 DA-GWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDIYNYDKTVRS 590

Query: 418 GIIPLPEDH 426
           G    P+  
Sbjct: 591 GAQISPQAE 599


>gi|84503420|ref|ZP_01001480.1| peptidoglycan binding protein, putative [Oceanicola batsensis
           HTCC2597]
 gi|84388207|gb|EAQ01159.1| peptidoglycan binding protein, putative [Oceanicola batsensis
           HTCC2597]
          Length = 539

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 102/410 (24%), Positives = 190/410 (46%), Gaps = 10/410 (2%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
           L L   + +    +  S +D  I           +   +   D           +    +
Sbjct: 125 LFLRYAVDVQTGVLKPSDVDSGIVRKVPLRDRRGYLEGITSADPAAFVASLPPQRLEYTR 184

Query: 78  TEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             +     + +++ GG+   +  + L  G++  +V  LR RL+  G L   + + V +D 
Sbjct: 185 LMREKLRLERLIASGGFGATVQAQSLEPGDTGEAVVALRNRLMTMGYLP--RRVGVTYDR 242

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +ESAV  FQ  HGL   G+  ++T+  +NVPV+ R++ + V + R +  + + +G R+V
Sbjct: 243 DMESAVLRFQADHGLSEDGVAGTATIAEINVPVEERLKSVIVAMERER-WINRDLGDRHV 301

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           LVN+       +ENGK+  ++  ++G+     +TP     +  ++ NP W +PRSI   +
Sbjct: 302 LVNLTDFHARIMENGKIYFKTRSVIGKNLSTHRTPEFSDVMEHMIVNPTWNVPRSIAVSE 361

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            +   +++P    ++++ +ID +G+ V    V++ +    NF F  +Q P   NA+   K
Sbjct: 362 YLPAFKRNPY--SNSHLKLIDARGRVVDRGSVNFAAYSKRNFPFDLKQPPSSRNALGLVK 419

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F + +N Y+HDTP   LF+  VR  + GC+R+    +    LL              +
Sbjct: 420 FMFPNVHNIYLHDTPAKSLFSRDVRAFSHGCIRLNEPFEFAHALLAWQSDDPEGLFRSTL 479

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            T + T + LA+ +PVH +Y +A S     + +R D+YG D      +  
Sbjct: 480 NTGRETKIDLASPLPVHLIYRTAMSQPKGQMSYRRDVYGRDGRIWEALAR 529


>gi|323138298|ref|ZP_08073369.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322396381|gb|EFX98911.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 387

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 124/358 (34%), Positives = 200/358 (55%), Gaps = 5/358 (1%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGD 123
           D   P++  ET   T KA   Y  I+  GGWP++ +  L  G+   +V  LR RL    D
Sbjct: 32  DDPAPVLQPETFFTTSKASERYAQIVDLGGWPKVGV-SLRPGSKGPAVSTLRRRLAAEDD 90

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
              +     ++D  +  AVK FQ R GL  +G+V  +TL A++VP  +R RQL  +  R+
Sbjct: 91  -AVTDTNKQSWDPALTEAVKRFQFRMGLKQTGVVAGATLRALDVPATVRFRQLASSAQRL 149

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
              ++   G RY++VNIP+ +++AV+N +V  R   IVG  +  +P + +++  +  NP 
Sbjct: 150 AG-VDFPFGPRYIVVNIPSTAVDAVDNDRVVRRYAAIVGDPEHHSPEVQAKVVAVNINPT 208

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P SII+ ++   + +DP YL  + I +++ +G+EV    ++W S    N+  RQD G
Sbjct: 209 WTVPTSIIKNEIAPKMLKDPSYLTRSRIRVLNGRGEEVDPRSINWASERAVNYTLRQDSG 268

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL--KDTP 361
             N++ S +I   + ++ YMHDTP   LF +  RF + GCVRV+ ++DL  WLL   + P
Sbjct: 269 AHNSLGSIRISMPNPHSVYMHDTPSRNLFASDYRFLSHGCVRVQGVVDLAAWLLDGSNGP 328

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
             S+  I   + + +   V+L+  VPV +VY++ W+  D I+ FRDD+Y LD V    
Sbjct: 329 QLSKEQINAKIASGEREEVRLSHPVPVVWVYMTGWASADGIVHFRDDVYHLDEVGGAA 386


>gi|212709809|ref|ZP_03317937.1| hypothetical protein PROVALCAL_00857 [Providencia alcalifaciens DSM
           30120]
 gi|212687620|gb|EEB47148.1| hypothetical protein PROVALCAL_00857 [Providencia alcalifaciens DSM
           30120]
          Length = 575

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 123/445 (27%), Positives = 189/445 (42%), Gaps = 57/445 (12%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+            LY    Y I+         P         I     +    R 
Sbjct: 140 MLGYLQYLSSVESSGQYWLYTSRPYKIIA--------PTTPQ-----IKPWLDAASEHRL 186

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQ 112
             ++           P+       +  K +A  +D L          + L  G +S  V 
Sbjct: 187 GEWVKAQAPKHAMYQPMR-----KEMLKQLALPEDTLEIT-----STKTLKPGQASDDVI 236

Query: 113 RLRERLIISGDLDPSKGLSVA------------------FDAYVESAVKLFQMRHGLDPS 154
            LRE L+  G L+ S                        +   +  AVK FQ+++GL+  
Sbjct: 237 TLREILVRDGLLEASAVSETVDASAPPEEINKVTANARVYSDDLVEAVKKFQLQYGLEAD 296

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G++   T   +N+    +   + +N+ R++ + E       +LVNIPA +L+   N  + 
Sbjct: 297 GVIGKGTRVWLNMQPKQKAGLMALNIQRLRIVPESS--GTGILVNIPAYTLDFYLNNDII 354

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           L S VIVGR DR+TPI+ S +N ++ NP W +P S+ +KD+    + DP Y       + 
Sbjct: 355 LDSKVIVGRADRKTPIMSSALNNVVINPPWSVPTSLARKDIAPKGKMDPSYFSRKGYTVY 414

Query: 275 DEKGK---EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
              G+   E+    +DW +  P NF +  RQ PG  N++   K    S +  Y+HDTP  
Sbjct: 415 SGWGQDAYEIDPYTIDWENITPANFPYHIRQAPGSSNSLGRYKFNMPSSDAIYLHDTPNH 474

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LFN   R  +SGCVRV    +L   LL D   W++  I+  +K   T  V +   +PV+
Sbjct: 475 SLFNKNARAISSGCVRVNKASELATILLGDA-GWAQTRIDGALKEGSTRYVNIPDRIPVY 533

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDN 414
             Y +AW  KD   Q+R DIY  D 
Sbjct: 534 LYYQTAWVDKDQQPQYRADIYQYDG 558


>gi|145599560|ref|YP_001163636.1| hypothetical protein YPDSF_2288 [Yersinia pestis Pestoides F]
 gi|145211256|gb|ABP40663.1| hypothetical protein YPDSF_2288 [Yersinia pestis Pestoides F]
          Length = 618

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 123/470 (26%), Positives = 197/470 (41%), Gaps = 60/470 (12%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHS---IVN 49
           M+GYL          +  LY    Y +     +++        ++E    SY +     +
Sbjct: 138 MLGYLHFISGVGANGSVWLYSNVPYKMAMPPAAVLN--AWQKAVNEGSTASYLASLAPQH 195

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKA-----IAFYQDILSRGGW--PELPIR-P 101
            ++D     + + +    P     T            I   ++IL R G   P  P++ P
Sbjct: 196 PQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQLSDDIPALREILDRTGMLHPTTPVKAP 255

Query: 102 LHLGNSSVSVQRLRERLII-----------------------SGDLDPSKG--------L 130
             +   + +V  + + L +                       S D  P+           
Sbjct: 256 EVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVSPSAVSVPESDDAAPAPMPPVSVVTLT 315

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
              +   +  AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L    
Sbjct: 316 DNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGHV 375

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIP  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S+
Sbjct: 376 --DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSL 433

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPGKI 305
           +++D++   R D  Y + N   ++     +   +    +DW+   P NF +  RQ PG  
Sbjct: 434 VRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGAN 493

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 494 NSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWND 552

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             +   VK   TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 553 ALVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 602


>gi|269961715|ref|ZP_06176076.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833580|gb|EEZ87678.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 530

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 105/419 (25%), Positives = 183/419 (43%), Gaps = 38/419 (9%)

Query: 6   KINKILYCFFVYLILPM----GLSLVEKPIHASVLDEIINESYHSI-VNDRFDNFLARVD 60
           +    L+     +  P      LSL+   I    LDE +NE    + +++ F+   A + 
Sbjct: 138 EGINWLFANKGNVSFPAPSIETLSLLSNEITVGKLDEFLNELRSPLQMDESFNTAYASLS 197

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                + P+  ++      + +A                    +G+       +  R+ I
Sbjct: 198 TYAKFEFPLYQQD------QRLAR-------------------VGDELFDKASMIARMQI 232

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            G D+      +  +D  +E AV  FQ  HGL   G++  +T+  +N     R+  L +N
Sbjct: 233 VGVDVGHLDTETTLYDENLELAVMEFQRIHGLKQDGIIGPNTIRWINFSPQQRLHSLALN 292

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +   +++     V VN+P   +    +G+    S V+VG+  R+TPI+   ++ ++
Sbjct: 293 AERSRIWAKER--DNVVFVNVPGYEVTYWHDGQPLFESKVVVGKASRKTPIMTGTLDSVI 350

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFI 297
            NP W +P  I+ KD++  ++++P YL  +NI +I        +    ++W +  P  F 
Sbjct: 351 LNPTWNVPWKIMVKDIIPKVKRNPMYLMQHNIQIIRSWTSREIIDPTTINWATVNPRTFP 410

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q  G  NA+   K    +    Y+HDTP   LFN   R  +SGCVRV +   L   
Sbjct: 411 YRMRQSSGSHNALGLYKFNMPNPQAIYLHDTPSKNLFNQDRRAFSSGCVRVEHADQLAEL 470

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           L K      R   +     R  T V L+  + VH +Y +AW  ++  + +RDDIY  D+
Sbjct: 471 LFKTQGLEERLAKKRQNGRRSNTSVPLSERIQVHIIYQTAWL-EEGTLYYRDDIYQYDD 528


>gi|308186271|ref|YP_003930402.1| hypothetical protein Pvag_0751 [Pantoea vagans C9-1]
 gi|308056781|gb|ADO08953.1| Uncharacterized protein ycbB [Pantoea vagans C9-1]
          Length = 603

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 124/484 (25%), Positives = 195/484 (40%), Gaps = 95/484 (19%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+            LY    Y +    ++             ++N+  +++     
Sbjct: 132 MLGYLQFVSNVPTQGETWLYSNVPYRLTQPSVA-------------VVNQWQNAVNAGSA 178

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSV 111
           D F+A +                     A+     +  +  WP+L     L  G  S  V
Sbjct: 179 DTFIASLQPQ---------HPQYQLMHVALKAL--LSDKQPWPQLKSSETLRPGQVSDDV 227

Query: 112 QRLRERLIISG-------------DLDPSKGLS--------------------------- 131
             LRE L  SG             D  P+  +                            
Sbjct: 228 PALREILQRSGMLTAQVNAPAPDDDAVPAAPVPVSHSDQPVAVSPSAAPVTNLLTPSPQS 287

Query: 132 --------------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                           +D  + + VK FQ   GLD  G + + T + +NV   +R   L 
Sbjct: 288 PGNIQTSTLEGNTANVYDETLVAGVKRFQQWQGLDGDGAIGTRTRQWLNVSPQMRASLLA 347

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +N+ R++ LL   M    ++VNI   SL    NG   L S VIVGR DR+TP++ S +N 
Sbjct: 348 LNIQRLR-LLPDDMH-NGIMVNIANYSLIYYNNGNKILSSRVIVGRPDRKTPLMRSALNN 405

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPP 294
           ++ NP W +P ++++KD++  ++QDP YL  +   ++     +   +    +DW      
Sbjct: 406 VVLNPPWNVPTTLVRKDIIPKVKQDPTYLYKHGYTLLSGWSADAEVIDPSMIDWRMVSAA 465

Query: 295 NFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
           +F +R  Q PG  NA+   K    S +  Y+HDTP   LF   +R  +SGCVRV    +L
Sbjct: 466 SFPYRMIQAPGVANALGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASEL 525

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LL+D   W+   I   +K   T  V +   +PV+  Y++AW   D   QFR DIY  
Sbjct: 526 AGLLLQDA-GWNDSRISSTLKEGDTRYVPIRHRIPVNLYYLTAWVADDGKPQFRTDIYNY 584

Query: 413 DNVH 416
           D+  
Sbjct: 585 DDTA 588


>gi|261344276|ref|ZP_05971920.1| putative peptidoglycan binding domain protein [Providencia
           rustigianii DSM 4541]
 gi|282567879|gb|EFB73414.1| putative peptidoglycan binding domain protein [Providencia
           rustigianii DSM 4541]
          Length = 575

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 26/340 (7%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPS------------------KGLSVAFDAYVE 139
             + L  G +S  V  LRE L+  G LD S                     +  ++  + 
Sbjct: 222 STKALKPGQASDDVITLREILVRDGLLDASVIGEAIDASAPPEEIAKVTANARVYNDELV 281

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            AVK FQ+++GL+  G++   T   +N+    +   + +N+ R++ + E       +LVN
Sbjct: 282 EAVKKFQLQYGLEADGVIGRGTRVWLNMQPKQKAGLMALNIQRLRIVPESS--GTGILVN 339

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IPA +L+   N ++ L S VIVGR DR+TPI+ S +N ++ NP W +P S+ +KD+    
Sbjct: 340 IPAYTLDFYLNNEIILDSKVIVGRADRKTPIMSSALNNVVINPPWSVPTSLARKDIAPKG 399

Query: 260 RQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIE 314
           + DP Y       +    G+   EV    +DW +  P NF +  RQ PG  N++   K  
Sbjct: 400 KVDPSYFSRKGYTVYSGWGQDAYEVDPYSIDWENMSPANFPYRIRQAPGPTNSLGRYKFN 459

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             S +  Y+HDTP   LFN   R  +SGCVRV    +L   LL D   W++  I+  +K 
Sbjct: 460 MPSSDAIYLHDTPNHSLFNKNARAISSGCVRVNKASELATILLGDA-GWAQTRIDGALKD 518

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             T  V +   +PV+  Y +AW  KD   Q+R DIY  D 
Sbjct: 519 GSTRYVNIPDRIPVYLYYQTAWVDKDQQPQYRADIYQYDG 558


>gi|158422063|ref|YP_001523355.1| hypothetical protein AZC_0439 [Azorhizobium caulinodans ORS 571]
 gi|158328952|dbj|BAF86437.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 649

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 98/339 (28%), Positives = 165/339 (48%), Gaps = 14/339 (4%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +P  P L  G+    V  LR RL     L  +      +DA +  AV  FQ   GL+  
Sbjct: 310 RVPGGPTLRPGDMDARVPALRARLG----LKSATASDRLYDADLARAVAAFQGASGLNAD 365

Query: 155 GMVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           G+V  STLE +N       R   +  N+ R +  L + +G  +V+VNIP   +  V++GK
Sbjct: 366 GVVGPSTLEVLNRVENPAERRADIIANMERWR-WLPRDLGSVHVMVNIPEFVVRVVDDGK 424

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
              ++ V+VG+ + QTP+L   +  ++ NPYW IP SI +K+M+  L++DP +L    + 
Sbjct: 425 TIHQTRVVVGKPENQTPLLTHDMEYVVLNPYWNIPPSIARKEMLPNLQRDPYFLARQGME 484

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           ++ + G+ V    V+W       + FRQ PG+ NA+   K  F + ++ Y+HDTP   LF
Sbjct: 485 VV-KNGRVVDPGTVNWAQGTGG-YSFRQPPGERNALGRIKFMFPNDHSVYLHDTPSKALF 542

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLK---DTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            N  R  + GC+RV++ +     +         W+   I +++       + L   +PVH
Sbjct: 543 ANDRRAYSHGCIRVQDPLKFAEVIFNIGMPGQGWTDEKIGKML-GGAERYLTLKQRIPVH 601

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPI 428
            VY + +      +  R+D+YG +      + L  +  +
Sbjct: 602 LVYFTTFVDDSGRLVSREDVYGTNAKVKEALGLDGEQKV 640


>gi|298293068|ref|YP_003695007.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296929579|gb|ADH90388.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 678

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 105/370 (28%), Positives = 168/370 (45%), Gaps = 15/370 (4%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLR 115
                  DS  P    +     +  +A            ++P  P L  G+S   V  LR
Sbjct: 304 PNPRAAFDSFAPQY--DEYKLLKVELAKLMAEGRGVTQVQVPAGPMLRPGDSDPRVPLLR 361

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
            RL I G           +D+++  AV+ FQ   GL P G+V   TL A+N     ++  
Sbjct: 362 ARLGIGG-----APEDTEYDSFLADAVRDFQKLSGLKPDGVVGRGTLAALNGAGGDQMPD 416

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           +  N+ R +  +  ++   YV+VNIP   +  V N +    + V+VG+ D QTP++   +
Sbjct: 417 IIANMERWR-WVPHQVAPVYVMVNIPEFMVRVVVNEQTVHETRVVVGKPDTQTPLMSENM 475

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
              +FNP W +P SII+ +M+  L  DP  L+   I ++   G+ V    +DW+      
Sbjct: 476 QYAVFNPSWNVPPSIIRNEMLPKLMADPYALERQGIDVV-RNGRIVDPGAIDWSR-GATG 533

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           + FRQ+PG+ NA+   K  F +++  Y+HDTP   LF    R  + GCVRV   +     
Sbjct: 534 YSFRQEPGERNALGRMKFMFPNKHAVYLHDTPSRSLFARERRAFSHGCVRVHEPLAFAEA 593

Query: 356 LLK---DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
           L         WS+  I ++V       V L    PVH VY + +   +  +  R+D+YG+
Sbjct: 594 LFALGLPNEGWSQPRIAKLV-GGNEKSVTLKRRFPVHLVYFNTFVDGNGRLVSREDLYGI 652

Query: 413 DNVHVGIIPL 422
           +     I+ L
Sbjct: 653 NGATKAILGL 662


>gi|156974988|ref|YP_001445895.1| hypothetical protein VIBHAR_02710 [Vibrio harveyi ATCC BAA-1116]
 gi|156526582|gb|ABU71668.1| hypothetical protein VIBHAR_02710 [Vibrio harveyi ATCC BAA-1116]
          Length = 530

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 103/418 (24%), Positives = 183/418 (43%), Gaps = 38/418 (9%)

Query: 6   KINKILYCFFVYLILPM----GLSLVEKPIHASVLDEIINESYHSI-VNDRFDNFLARVD 60
           +    L+   V++  P      LSL+   I    LD+ + +    + +++ F+   + + 
Sbjct: 138 EGINWLFANKVHVKFPAPSIETLSLLSNEITVGKLDQFLTDLRSPLQMDESFNTAFSSLS 197

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                + P+  ++      + +A                    +G+       L  R+ I
Sbjct: 198 TYAKFEFPLYQQD------QRLAR-------------------VGDELFDKSSLIARMQI 232

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            G ++      +  +D  +E AV  FQ  HGL   G++  +TL  +N     R+  L +N
Sbjct: 233 VGVEVGHLDTETTLYDENLELAVMEFQRIHGLKQDGIIGPNTLRWINFSPQQRLHSLALN 292

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +   +++     V VN+P   +    +G+    S V+VG+  R+TPI+   ++ ++
Sbjct: 293 AERSRIWSKER--DNVVFVNVPGYEVTYWHDGQPLFESKVVVGKASRKTPIMTGTMDSVI 350

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFI 297
            NP W +P  I+ KD++  ++++P YL ++NI +I        +    ++W +  P  F 
Sbjct: 351 LNPTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFP 410

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q  G  NA+   K    +    Y+HDTP   LFN   R  +SGCVRV +   L   
Sbjct: 411 YRMRQSSGSHNALGLYKFNMPNPQAIYLHDTPSKNLFNQDRRAFSSGCVRVEHADQLAEL 470

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L K      R   +     R  T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 471 LFKTQGLEERLAKKRQSGRRSNTSVPLTERIQVHIIYQTAWL-EEGTLYYRDDIYQYD 527


>gi|238785818|ref|ZP_04629788.1| Peptidoglycan-binding domain 1 protein [Yersinia bercovieri ATCC
           43970]
 gi|238713271|gb|EEQ05313.1| Peptidoglycan-binding domain 1 protein [Yersinia bercovieri ATCC
           43970]
          Length = 606

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 103/306 (33%), Positives = 153/306 (50%), Gaps = 9/306 (2%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           +      +   + +AVK FQ+ HGL   G++ + T E +NV    R   L +N+ R++ L
Sbjct: 300 ATLTDNVYTPELVAAVKRFQLWHGLSDDGVIGARTREWLNVSPQTRATLLALNIQRLRIL 359

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             Q      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +
Sbjct: 360 PGQV--DNGIMVNIPNYSLNYYKNGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNV 417

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQD 301
           P S++++D++   R D  Y + +   ++     E   V    +DW+   P NF +  RQ 
Sbjct: 418 PTSLVRQDIVPKARYDAGYFQRHGYTVLSGWSNEAEVVDPSMIDWSMISPNNFPYRLRQA 477

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D  
Sbjct: 478 PGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA- 536

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGII 420
            W+   +   +K   TT V +   VPV   Y++AW   D   QFR DIY  D  V  G  
Sbjct: 537 GWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDIYNYDKTVRSGAQ 596

Query: 421 PLPEDH 426
             P+  
Sbjct: 597 ISPQAE 602


>gi|238753519|ref|ZP_04614882.1| Peptidoglycan-binding domain 1 protein [Yersinia ruckeri ATCC
           29473]
 gi|238708472|gb|EEQ00827.1| Peptidoglycan-binding domain 1 protein [Yersinia ruckeri ATCC
           29473]
          Length = 620

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 120/474 (25%), Positives = 199/474 (41%), Gaps = 64/474 (13%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESY---HSIVN 49
           M+GYL          N  LY    Y +     +++ +      + E    +Y    +  +
Sbjct: 136 MLGYLHFVSGVGTNGNVWLYSNVPYKMAMPPTAILNR--WQQAVREGNTAAYMTALAPQH 193

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKA-----IAFYQDILSRGGW----PELPIR 100
            +++     +   +  + P       A          I   ++IL R G     P  P++
Sbjct: 194 PQYEKMHQALKSMLADNRPWPQFTGAATLRPGQLSDDIPALREILDRSGLLNAAPAAPVK 253

Query: 101 PLH-LGNSSVSVQRLRERLIISGDLDPSKGLSVA-------------------------- 133
               +   +  V  + + L +  +   ++  S+                           
Sbjct: 254 SPEVIPMDNPVVAVVNDDLSVDEEKTRAQAHSLVVSPAAAPISEITTSPQTLTTAHSGNK 313

Query: 134 -------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                  +   + +AVK FQ   GL   G++   T E +NV   +R   L +N+ R++ L
Sbjct: 314 LSVTDNQYGEELVAAVKRFQQWQGLTDDGVIGPRTREWLNVSPQMRASLLALNIQRLRIL 373

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             Q      ++VNIP  SL    NG   L S VIVGR  R+TP++ S +N ++ NP W +
Sbjct: 374 PGQV--TTGIMVNIPNYSLSYYLNGTEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNV 431

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQD 301
           P S+I++D+M   R D  Y + +   ++   G +   +    +DW+   P +F +  RQ+
Sbjct: 432 PISLIRQDIMPKARNDASYFQRHGYTVLSGWGNDAEAINPSMIDWSLISPNHFPYRLRQE 491

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D  
Sbjct: 492 PGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLASMLLQDA- 550

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            W+   +   +K   TT V +   +PV   Y++AW  +D   QFR DIY  D  
Sbjct: 551 GWNNERVSSTLKQGNTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYDKT 604


>gi|162419158|ref|YP_001606446.1| hypothetical protein YpAngola_A1973 [Yersinia pestis Angola]
 gi|166211229|ref|ZP_02237264.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167424284|ref|ZP_02316037.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|162351973|gb|ABX85921.1| conserved hypothetical protein [Yersinia pestis Angola]
 gi|166207000|gb|EDR51480.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167057133|gb|EDR66896.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
          Length = 596

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 123/470 (26%), Positives = 197/470 (41%), Gaps = 60/470 (12%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHS---IVN 49
           M+GYL          +  LY    Y +     +++        ++E    SY +     +
Sbjct: 116 MLGYLHFISGVGANGSVWLYSNVPYKMAMPPAAVLN--AWQKAVNEGSTASYLASLAPQH 173

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKA-----IAFYQDILSRGGW--PELPIR-P 101
            ++D     + + +    P     T            I   ++IL R G   P  P++ P
Sbjct: 174 PQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQLSDDIPALREILDRTGMLHPTTPVKAP 233

Query: 102 LHLGNSSVSVQRLRERLII-----------------------SGDLDPSKG--------L 130
             +   + +V  + + L +                       S D  P+           
Sbjct: 234 EVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVSPSAVSVPESDDAAPAPMPPVSVVTLT 293

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
              +   +  AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L    
Sbjct: 294 DNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGHV 353

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIP  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S+
Sbjct: 354 --DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSL 411

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPGKI 305
           +++D++   R D  Y + N   ++     +   +    +DW+   P NF +  RQ PG  
Sbjct: 412 VRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGAN 471

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 472 NSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWND 530

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             +   VK   TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 531 ARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 580


>gi|114332479|ref|YP_748701.1| peptidoglycan binding domain-containing protein [Nitrosomonas
           eutropha C91]
 gi|114309493|gb|ABI60736.1| Peptidoglycan-binding domain 1 protein [Nitrosomonas eutropha C91]
          Length = 561

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 112/416 (26%), Positives = 201/416 (48%), Gaps = 20/416 (4%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL---ARVDMGIDSDIPIISKET 74
            +L +   L    + AS+ D   +          F        +++       P I    
Sbjct: 147 SLLALAHDLHSGRLTASLADPDWHIPQQQFDPVTFLQQALTSGKLEQAFADLPPDI--PQ 204

Query: 75  IAQTEKAIAFYQDILSRGG-WPELPIRP--LHLGNSSVSVQRLRERLII------SGDLD 125
               ++ +  ++ +++    W  +P     +       S+ ++R+R+          +  
Sbjct: 205 YRSLKQLLNKFRTLVAADTIWTRIPEETSLIRPHTRHTSIPQVRQRIQEAYHIFEKPEYG 264

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                S  +D  +E AVK FQ +HGL+  G++  +T  AMN+     ++QL++ L R++ 
Sbjct: 265 IVVSDSEFYDDQLEIAVKAFQRQHGLNADGIIGKNTRRAMNITPGEHVQQLRITLERLR- 323

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
            L +K+G RY+LVNI   +L AV+     L   ++VGR  R TP  +S+I  ++ NPYW 
Sbjct: 324 WLPRKLGDRYILVNIAGFNLVAVQENVRVLDMKIVVGRDYRSTPSFNSKITHLVLNPYWN 383

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWNSPEPP-NFIFRQDP 302
           +P SI +KD++   R +P Y     I +  +     E+  + +DW+S      +I RQDP
Sbjct: 384 VPASIARKDLLPKQRYNPDYFASEGIRVFSDYKYESELNPDFIDWHSTSRSLPYILRQDP 443

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G+ NA+ + K  F +  + Y+HDTP   LF   +R  +SGC+R+   + L  ++L    +
Sbjct: 444 GRRNALGTIKFMFPNPFSIYLHDTPSKYLFQKDIRTFSSGCIRLEKPLQLAEFVLG--QS 501

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           + +  I E + + KT  V L  ++PV+ +Y++AWS +   + F  D+YG D   + 
Sbjct: 502 FEQADIAEKISSGKTQTVHLPEKIPVYLLYLTAWSDEQGEVYFSSDVYGRDKRALA 557


>gi|30250492|ref|NP_842562.1| putative periplasmic protein [Nitrosomonas europaea ATCC 19718]
 gi|30139333|emb|CAD86485.1| putative periplasmic protein [Nitrosomonas europaea ATCC 19718]
          Length = 578

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 114/427 (26%), Positives = 207/427 (48%), Gaps = 20/427 (4%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNF-LARVDMGIDSDIPIIS----K 72
            +L +   L    + A++ D         +    F    +A VD     +  + S     
Sbjct: 149 SLLALVHDLSNGRLTATLADPDWYVPQRRLDPVNFLQQSIASVDSAEQLEQVLASLPPNM 208

Query: 73  ETIAQTEKAIAFYQDILSRGG-WPELP--IRPLHLGNSSVSVQRLRERL------IISGD 123
                 ++ +   + +++ G  W  +P  I  +H      ++  +R+R+          +
Sbjct: 209 PQYHTLKRLLVRLRILVAAGTVWTRIPDDIPSIHPRTRHAAIPLIRQRIREAYSVFEKPE 268

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
            D +   S  +D  +E+A+K FQ ++GL+  G+V  +T  AMN+     I+QL++ L R+
Sbjct: 269 YDIASDDSELYDDQLETAIKAFQYQYGLNTDGVVGKNTRRAMNMTAVEHIQQLRITLERL 328

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +  L ++   RY+LVNI   +L A+ N    L   ++VGR  R TP  +SRI+ ++ NPY
Sbjct: 329 R-WLPREFSNRYILVNIAGFNLAAIRNNVRVLNMRIVVGRDYRSTPSFNSRISHLVLNPY 387

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEPP-NFIFRQ 300
           W +P SI  KD++   + +P Y     I +  +     E+  + +DW++      ++ RQ
Sbjct: 388 WNVPASIASKDLLPKQKHNPDYFASEGIRVFSDYHYELELDPDAIDWHAFSRSFPYVLRQ 447

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           DPGK NA+ + K  F +  + Y+HDTP   LF   +R  +SGC+R+   + L  ++L   
Sbjct: 448 DPGKRNALGTIKFMFPNPFSIYLHDTPSKSLFQRDIRTFSSGCIRLEKPMQLAEFVLG-- 505

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           P++ + +I E + + KT  V L   +PV+ +Y++AW+     + F  D+YG D   +   
Sbjct: 506 PSFEKANILEKIDSGKTQTVHLPEPIPVYLLYLTAWNDGQGEVHFSADVYGRDKRALAYA 565

Query: 421 PLPEDHP 427
              +  P
Sbjct: 566 RWLQPEP 572


>gi|304397085|ref|ZP_07378964.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
 gi|304355234|gb|EFM19602.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
          Length = 603

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 124/484 (25%), Positives = 196/484 (40%), Gaps = 95/484 (19%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+            LY    Y +    ++             ++N+  +++     
Sbjct: 132 MLGYLQFVSNVPTQGETWLYSNVPYRLTQPSVA-------------VVNQWQNAVNAGSD 178

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSV 111
           + F+A +        P            A+     +  +  WP+L     L  G  S  V
Sbjct: 179 NAFIASLQPQHPQYQP---------MHAALITL--LSDKQPWPQLKSSETLRPGQVSDDV 227

Query: 112 QRLRERLIISGD-----------------------------------------LDPSK-- 128
             LRE L  SG                                          L PS   
Sbjct: 228 PALREILQRSGMLTAQVNAPAPNDDAVPVAASPVTHSDQPVAVSPSAAPVSNLLTPSPQS 287

Query: 129 -----------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                        +  +D  + +AVK FQ   GLD  G + + T + +NV   +R   L 
Sbjct: 288 PGNVQSQTLEGNTANIYDETLVAAVKRFQQWQGLDGDGAIGARTRQWLNVSPQMRASLLA 347

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +N+ R++ LL   M    ++VNI   SL     G   L S VIVGR DR+TP++ S +N 
Sbjct: 348 LNIQRLR-LLPDDMH-NGIMVNIANYSLIYYNKGNKILSSRVIVGRPDRKTPLMRSALNN 405

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPP 294
           ++ NP W +P ++++KD++  ++ DP YL  +   ++     +   +    +DW      
Sbjct: 406 VVLNPPWNVPTTLVRKDIIPKVKLDPTYLYKHGYTLLSGWSADAEVIDPSMIDWRMVTAS 465

Query: 295 NFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
           +F +R  Q PG+ NA+   K    S +  Y+HDTP   LF   +R  +SGCVRV    +L
Sbjct: 466 SFPYRLIQAPGEANALGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASEL 525

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LL+D   W+   I   +K   T  V +   +PV+  Y++AW   D   QFR DIY  
Sbjct: 526 AGLLLQDA-GWNDARISSTLKEGDTRYVPIRHRIPVNLYYLTAWVADDGKPQFRTDIYNY 584

Query: 413 DNVH 416
           D+  
Sbjct: 585 DDTA 588


>gi|291326407|ref|ZP_06124362.2| putative peptidoglycan binding domain protein [Providencia rettgeri
           DSM 1131]
 gi|291314414|gb|EFE54867.1| putative peptidoglycan binding domain protein [Providencia rettgeri
           DSM 1131]
          Length = 583

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 113/357 (31%), Positives = 167/357 (46%), Gaps = 42/357 (11%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLD------------------------------- 125
           +  + L LG SS  V  LR+ L   G L+                               
Sbjct: 213 VGTKALKLGQSSDDVVMLRQILQREGLLEGGNVTEEVAPPETMAQVAELAVEQTVEPTEP 272

Query: 126 ---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
              P+  +S  +D  +  AVK FQ+++GL+  G+V   T   +N+    +   + +N+ R
Sbjct: 273 SDAPASTVSKVYDQELVDAVKKFQLQYGLEADGVVGKGTRVWLNMQPKQKAGLMALNIQR 332

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++ +         +LVNIP  SL+   N +V L S VIVGR DR+TPI+ S +N ++ NP
Sbjct: 333 LRIIPASS--GTGILVNIPGYSLDFYLNDEVILDSKVIVGRADRKTPIMSSALNNVVINP 390

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFIF- 298
            W +P S+ +KD+    +QDP Y       +    G    E+    +DW++  P NF + 
Sbjct: 391 PWSVPTSMARKDIAPKGKQDPSYFSRKGYTVYSGWGADSYEINPYAIDWDNITPANFPYR 450

Query: 299 -RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ PG  N++   K    S +  Y+HDTP   LFN   R  +SGCVRV    +L   LL
Sbjct: 451 IRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHSLFNRNARAISSGCVRVNKASELASILL 510

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            D   W +  I+  +K   T  V +   +PV   Y +AW  KD   Q+R DIY  DN
Sbjct: 511 GDA-GWEQKRIDGALKEGSTRYVNIPDRIPVFLYYQTAWVDKDQQPQYRADIYQYDN 566


>gi|238763355|ref|ZP_04624319.1| Peptidoglycan-binding domain 1 protein [Yersinia kristensenii ATCC
           33638]
 gi|238698454|gb|EEP91207.1| Peptidoglycan-binding domain 1 protein [Yersinia kristensenii ATCC
           33638]
          Length = 624

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 97/289 (33%), Positives = 147/289 (50%), Gaps = 8/289 (2%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +   +  AVK FQ  HGL   G++ + T E +NV    R   L +N+ R++ L  +
Sbjct: 321 TDNVYTPELMEAVKRFQQWHGLSEDGVIGARTREWLNVSPQTRATLLALNIQRLRILPGR 380

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P S
Sbjct: 381 V--DNGIMVNIPNYSLNYYKNGSEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTS 438

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPGK 304
           ++++D++   R D  Y + +   ++     +   V    +DW+   P NF +  RQ PG 
Sbjct: 439 LVRQDIVPKARYDSSYFQRHGYTVLSGWSNDAQVVDPSMIDWSMISPNNFPYRLRQAPGA 498

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+
Sbjct: 499 SNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWN 557

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +   +K   TT V +   +PV   Y++AW  +D   QFR DIY  D
Sbjct: 558 DARVSSTLKQGDTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYD 606



 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDL 124
            +  ++ +     +  +A  Q +  R  WP++   P L  G  S  +  LRE L  +G L
Sbjct: 187 YLASLAPQHPQYEKMHLALKQMLADRRPWPQMANGPSLRPGQLSDDIPALREILDRTGML 246

Query: 125 DPSKGLSV 132
            P     V
Sbjct: 247 HPVASAPV 254


>gi|255263285|ref|ZP_05342627.1| peptidoglycan-binding domain 1 protein [Thalassiobium sp. R2A62]
 gi|255105620|gb|EET48294.1| peptidoglycan-binding domain 1 protein [Thalassiobium sp. R2A62]
          Length = 533

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 173/384 (45%), Gaps = 11/384 (2%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
            Y          F           +P  + E      + +   + +L++GG+       L
Sbjct: 147 PYRGRA-QTLAAFAQSTPAAFLRSLPPAAPEYSRLMREKL-RLEQLLAQGGFGARVSGTL 204

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G S   V  LR RLI  G L+ +   +  +DA +++AV+ FQ  HGL+  G     T+
Sbjct: 205 APGTSGQQVVNLRNRLIAMGFLEGNA--TQTYDANIQAAVQRFQTAHGLNADGSAGQGTV 262

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             +N   + R++ + V + R +  + +  G R+V VN+   +   ++N  V  ++  ++G
Sbjct: 263 TELNKSAESRLQAVIVAMERER-WINRPRGTRHVWVNLTDFTASIIDNDAVTFQTRSVIG 321

Query: 223 RVD--RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
             D  R++P     +  ++ NP W +PRSI  K+ +  L+ +P  +   ++ + D +G+ 
Sbjct: 322 ANDSNRRSPEFSDVMEFMVINPSWYVPRSIATKEYLPRLQSNPNAVS--HLEITDSRGRV 379

Query: 281 VFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           V    V+++      F F  RQ P + NA+   K  F ++ N Y+HDTP   LF   VR 
Sbjct: 380 VNRSSVNFSQYSARTFPFNMRQPPSRGNALGLVKFMFPNQYNIYLHDTPAKNLFGREVRA 439

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GC+R+ +  D    LL           +  ++T     V L   VPVH VY +A++ 
Sbjct: 440 YSHGCIRLNDPFDFAYALLAKQTADPEGFFQAKLRTAAEARVNLNQPVPVHIVYRTAFTD 499

Query: 399 KDSIIQFRDDIYGLDNVHVGIIPL 422
               + FR DIYG D      +  
Sbjct: 500 VRGTLNFRRDIYGRDGKIWNALSR 523


>gi|119383985|ref|YP_915041.1| peptidoglycan binding domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119373752|gb|ABL69345.1| Peptidoglycan-binding domain 1 protein [Paracoccus denitrificans
           PD1222]
          Length = 535

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 98/383 (25%), Positives = 162/383 (42%), Gaps = 6/383 (1%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
           E       D    F A  D                   +A+A    +++ G  P +    
Sbjct: 143 EVQRPRTGDLLRAFAAAADPVAMLAALPPQDARYEALRQALARQSQLVAPGDAPRVAEGL 202

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
              G S  +V  LR RL   G      G  + +D  +  AV  +Q   GL   G+    T
Sbjct: 203 WREGTSDPAVAALRVRLASVGFAAAPMGSPLTYDGALAQAVAAYQKAAGLPADGVAGPRT 262

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           +  +N         + V L R++ +    +  R+V VN+P  +    ENG+    + V++
Sbjct: 263 VARLNRGTGPEAEAILVALERMRWMRGHDLNARHVWVNLPEFNARIYENGREVFETRVVI 322

Query: 222 GRVDRQ--TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           G+ +R+  TP     +  ++ NP W +PRSI  K+ +  L+ +   +   ++ ++D  G 
Sbjct: 323 GKANREFETPEFSETMKYMVVNPRWNVPRSITVKEYLPRLQANRHAV--GHLDVVDGAGN 380

Query: 280 EVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +  + +D+       F +R  Q P   NA+   K  F +  N Y+HDTP   LFN   R
Sbjct: 381 VIARDRIDFRKYSAKTFPYRMRQKPSDDNALGQVKFMFPNPWNIYLHDTPTKHLFNQSSR 440

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             + GC+RV   +DL   LLK           + +K+ + T + L   VPVH VY +A+ 
Sbjct: 441 AYSHGCIRVGRPVDLAHELLKGQVESPEAVFSKALKSGRETYLNLRPPVPVHLVYFTAFP 500

Query: 398 PKDSIIQFRDDIYGLDNVHVGII 420
            +   I+   DIYG D +    +
Sbjct: 501 DESGQIRRFPDIYGRDALVHAAL 523


>gi|165924622|ref|ZP_02220454.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938929|ref|ZP_02227482.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009934|ref|ZP_02230832.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|167399976|ref|ZP_02305494.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419803|ref|ZP_02311556.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|270486929|ref|ZP_06204003.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294503394|ref|YP_003567456.1| hypothetical protein YPZ3_1284 [Yersinia pestis Z176003]
 gi|152960577|gb|ABS48038.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           31758]
 gi|165913076|gb|EDR31700.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165923682|gb|EDR40814.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991330|gb|EDR43631.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166962544|gb|EDR58565.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167050684|gb|EDR62092.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|262365029|gb|ACY61586.1| hypothetical protein YPD8_0898 [Yersinia pestis D182038]
 gi|270335433|gb|EFA46210.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294353853|gb|ADE64194.1| hypothetical protein YPZ3_1284 [Yersinia pestis Z176003]
          Length = 569

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 123/470 (26%), Positives = 197/470 (41%), Gaps = 60/470 (12%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHS---IVN 49
           M+GYL          +  LY    Y +     +++        ++E    SY +     +
Sbjct: 89  MLGYLHFISGVGANGSVWLYSNVPYKMAMPPAAVLN--AWQKAVNEGSTASYLASLAPQH 146

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKA-----IAFYQDILSRGGW--PELPIR-P 101
            ++D     + + +    P     T            I   ++IL R G   P  P++ P
Sbjct: 147 PQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQLSDDIPALREILDRTGMLHPTTPVKAP 206

Query: 102 LHLGNSSVSVQRLRERLII-----------------------SGDLDPSKG--------L 130
             +   + +V  + + L +                       S D  P+           
Sbjct: 207 EVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVSPSAVSVPESDDAAPAPMPPVSVVTLT 266

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
              +   +  AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L    
Sbjct: 267 DNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGHV 326

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIP  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S+
Sbjct: 327 --DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSL 384

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPGKI 305
           +++D++   R D  Y + N   ++     +   +    +DW+   P NF +  RQ PG  
Sbjct: 385 VRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGAN 444

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+ 
Sbjct: 445 NSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWND 503

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             +   VK   TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 504 ARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 553


>gi|153835596|ref|ZP_01988263.1| cell wall degradation protein [Vibrio harveyi HY01]
 gi|148867813|gb|EDL67053.1| cell wall degradation protein [Vibrio harveyi HY01]
          Length = 515

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 103/418 (24%), Positives = 183/418 (43%), Gaps = 38/418 (9%)

Query: 6   KINKILYCFFVYLILPM----GLSLVEKPIHASVLDEIINESYHSI-VNDRFDNFLARVD 60
           +    L+   V++  P      LSL+   I    LD+ + +    + +++ F+   + + 
Sbjct: 123 EGINWLFANKVHVKFPAPSIETLSLLSNEITVGKLDQFLTDLRSPLQMDESFNTAFSSLS 182

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                + P+  ++      + +A                    +G+       L  R+ I
Sbjct: 183 TYAKFEFPLYQQD------QRLAR-------------------VGDELFDKSSLIARMQI 217

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            G ++      +  +D  +E AV  FQ  HGL   G++  +TL  +N     R+  L +N
Sbjct: 218 VGVEVGHLDTETTLYDENLELAVMEFQRIHGLKQDGIIGPNTLRWINFSPQQRLHSLALN 277

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +   +++     V VN+P   +    +G+    S V+VG+  R+TPI+   ++ ++
Sbjct: 278 AERSRIWSKER--DNVVFVNVPGYEVTYWHDGQPLFESKVVVGKASRKTPIMTGTMDSVI 335

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFI 297
            NP W +P  I+ KD++  ++++P YL ++NI +I        +    ++W +  P  F 
Sbjct: 336 LNPTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFP 395

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q  G  NA+   K    +    Y+HDTP   LFN   R  +SGCVRV +   L   
Sbjct: 396 YRMRQSSGSHNALGLYKFNMPNPQAIYLHDTPSKNLFNQDRRAFSSGCVRVEHADQLAEL 455

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L K      R   +     R  T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 456 LFKTQGLEERLAKKRQSGRRSNTSVPLTERIQVHIIYQTAWL-EEGTLYYRDDIYQYD 512


>gi|253990246|ref|YP_003041602.1| hypothetical protein PAU_02769 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781696|emb|CAQ84859.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 568

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 115/429 (26%), Positives = 185/429 (43%), Gaps = 42/429 (9%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+            LY    Y I+                          +V D++
Sbjct: 152 MLGYLQFVSDVGQQGQNWLYRTTPYKIVLP----------------------SPVVIDQW 189

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
              +A  ++                  K +   + +     WP+L  +  L  G SS  V
Sbjct: 190 QQAIAGSNIVAYVTALAPQHPQYENMRKEMM--KQLADSKPWPQLSDKGVLRPGQSSSDV 247

Query: 112 QRLRERLIISGDLDP-SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
             LRE LI  G LD  +      +   + + V+ FQ   GL P G++   T + +N    
Sbjct: 248 TALREVLIRIGMLDELTTKSDNTYSPELVATVRNFQQWQGLAPDGVIGKRTRDWLNTSPQ 307

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            R   + +N+ R++ +         ++VNIP  SL+   N +  L S VIVGR  R+TPI
Sbjct: 308 DRAGLMALNIQRLRIIPGHV--STGIMVNIPDYSLQYYLNEQEVLNSKVIVGRPSRKTPI 365

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVD 287
           +++ +N ++ NP W +P S+ +KD+      DP Y +     +          +    +D
Sbjct: 366 MNNVLNNVVINPPWSVPTSLARKDIAPRGVNDPGYFQRRGYVIFSSWRADASVIDPYTID 425

Query: 288 WNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           WN   P NF +R  Q PG  N++   K    + +  Y+HDTP   LF+  +R  +SGCVR
Sbjct: 426 WNVVTPANFPYRIWQAPGPTNSLGRYKFNMPNSDAIYLHDTPNHGLFDKDIRAISSGCVR 485

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V    +L   LL D   W++  +   +K   T  V +   +PV+  Y++AW  +  + Q+
Sbjct: 486 VNKASELASMLLGDA-GWNQNRVSNTLKQGNTAYVNIPQRIPVYLYYLTAWVDELGVAQY 544

Query: 406 RDDIYGLDN 414
           R DIY  DN
Sbjct: 545 RTDIYDYDN 553


>gi|121606474|ref|YP_983803.1| peptidoglycan-binding domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120595443|gb|ABM38882.1| Peptidoglycan-binding domain 1 protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 525

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 117/403 (29%), Positives = 187/403 (46%), Gaps = 25/403 (6%)

Query: 40  INESYHSIVNDRFDNFLA--------RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
           I+ ++     + FD            R+        P +     AQ  +A+A Y++ ++ 
Sbjct: 113 IHHNFSPPQREAFDAAAYLQAALAARRLTDAASEAAPRL--PIYAQLREALARYRERVNH 170

Query: 92  GGW----PELP---IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
             W    P LP      L  G S   +  L ERL   GD+ P   L   ++  +  A K 
Sbjct: 171 PAWRQPLPRLPGGKAGKLAPGQSYAGLALLAERLTALGDMAPGLPLPARYEGPLVDAAKA 230

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ RHGL   G++  +TL  + V    R+RQ+++ L R++       G R ++VNIP   
Sbjct: 231 FQQRHGLAADGVIGKTTLAQLQVMPAARVRQIELALERLR-WTPLLQGPRMIVVNIPEFV 289

Query: 205 LEAVE--NGK--VGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           L A E  +G+  V     ++VG+  D +TP+    +  I F+PYW +P SI + +++  L
Sbjct: 290 LRAYEVQDGQIHVQQEMKIVVGKALDTRTPLFDEDMRFIEFSPYWNVPPSIARAEIVPRL 349

Query: 260 RQDPQYLKDNNIHMIDEKGK-EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
           R+DP YL   N+  +   G+ +  V      +        RQ PG  NA+   K  F + 
Sbjct: 350 RRDPGYLARENMEFVSAGGRVDKTVSAGLLEAVLAGQSRIRQRPGPKNALGDIKFVFPNS 409

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +N Y+H TP   LF    R  + GC+RV + + L  ++LK+ P W+   I+  +   ++ 
Sbjct: 410 DNIYLHHTPATQLFERARRDFSHGCIRVEHPVALAKFVLKNMPEWTPERIQNAMSRGESA 469

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            ++LA  VPV   Y +    KD    F DDIYGLD +    + 
Sbjct: 470 TLRLAEPVPVLIAYGTTLV-KDGRTFFFDDIYGLDRLLDAALR 511


>gi|123441868|ref|YP_001005851.1| hypothetical protein YE1557 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088829|emb|CAL11635.1| putative exported protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 623

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 119/473 (25%), Positives = 194/473 (41%), Gaps = 65/473 (13%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHS----IV 48
           M+GYL          +  LY    Y +     +++ +      + E     Y +      
Sbjct: 138 MLGYLHFISGVGANGSVWLYSNVPYKMAMPPATILNR--WQQAVHEGTTAPYLASLAPPQ 195

Query: 49  NDRFDNFLARVDMGIDSDIPIISKETIAQTEKA-----IAFYQDILSRGGW--PELPI-- 99
           + +++     +   +    P                  I   ++IL R G   P +P   
Sbjct: 196 HPQYEKMHQALKEMLADRRPWPQMANGPSLRPGQLSDDIPALREILDRTGMLHPVVPAPV 255

Query: 100 -RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--------------------------- 131
             P  +   + +V  + + L +  +   ++  S                           
Sbjct: 256 QTPEVIPVDNPAVAVVNDDLSVDEEKSRAQAHSLVVSPSAAPVADTPVTSGVVAPSSAPV 315

Query: 132 ------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                   +   +  AVK FQ  HGL   G++ + T E +NV    R   L +N+ R++ 
Sbjct: 316 TATVTDNVYTPELMEAVKRFQRWHGLSDDGVIGARTREWLNVSPQTRATLLALNIQRLRI 375

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L  +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W 
Sbjct: 376 LPGRV--DNGIMVNIPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWN 433

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQ 300
           +P S++++D++   R D  Y + +   ++     +   V    +DW+   P NF +  RQ
Sbjct: 434 VPTSLVRQDIVPKARYDSSYFQRHGYTVLSGWSNDAEVVDPSMIDWSMISPNNFPYRLRQ 493

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D 
Sbjct: 494 APGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA 553

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   +   +K   TT V +   VPV   Y++AW   D   QFR DIY  D
Sbjct: 554 -GWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDIYNYD 605


>gi|238789300|ref|ZP_04633087.1| Peptidoglycan-binding domain 1 protein [Yersinia frederiksenii ATCC
           33641]
 gi|238722632|gb|EEQ14285.1| Peptidoglycan-binding domain 1 protein [Yersinia frederiksenii ATCC
           33641]
          Length = 625

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/292 (33%), Positives = 148/292 (50%), Gaps = 8/292 (2%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           +      +   +  AVK FQ  HGL   G++   T E +NV    R   L +N+ R++ L
Sbjct: 319 AAVTDNVYTPELMEAVKRFQQWHGLSDDGVIGIRTREWLNVTPQTRATLLALNIQRLRIL 378

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +
Sbjct: 379 PGRV--DNGIMVNIPNYSLNYYKNGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNV 436

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQD 301
           P S+I++D++   R D  Y + +   ++     +   V    ++WN   P NF +  RQ+
Sbjct: 437 PTSLIRQDIVPKARYDSSYFQRHGYTVLSGWSNDAEVVDPSMINWNMISPNNFPYRLRQE 496

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D  
Sbjct: 497 PGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA- 555

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            W+   +   +K   TT V +   +PV   Y++AW  +D   QFR DIY  D
Sbjct: 556 GWNDARVSSTLKQGNTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYD 607



 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 34/150 (22%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL          +  LY    Y +     ++V        + E     Y + +  + 
Sbjct: 138 MLGYLHFISGVGANGSVWLYSNVPYKMAMPPATIVNS--WQQAVHEGTTAPYLASLAPQ- 194

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
                                   +  +A+   Q +  R  WP++   P L  G  S  +
Sbjct: 195 -------------------HPQYEKMHQALK--QMLADRRPWPQMANGPSLRPGQLSDDI 233

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             LRE L  +G L P   +S   D+ V  A
Sbjct: 234 PALREILDRTGMLHPVASVSAK-DSEVIPA 262


>gi|238749753|ref|ZP_04611258.1| Peptidoglycan-binding domain 1 protein [Yersinia rohdei ATCC 43380]
 gi|238712408|gb|EEQ04621.1| Peptidoglycan-binding domain 1 protein [Yersinia rohdei ATCC 43380]
          Length = 622

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 99/294 (33%), Positives = 152/294 (51%), Gaps = 8/294 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             +      +   +  AVK FQ+ HGL   G++ + T E +NV    R   L +N+ R++
Sbjct: 314 STATVTDNVYTPELVEAVKRFQLWHGLSDDGIIGARTREWLNVSPQTRATLLALNIQRLR 373

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L  +      ++VNIP  SL   +NG+  L S VIVGR  R+TP++ S +N ++ NP W
Sbjct: 374 ILPGRV--DNGIMVNIPNYSLNYYKNGEQVLSSRVIVGRPSRKTPLMSSALNNVVVNPPW 431

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--R 299
            +P S+I++D++   R D  Y + +   ++     +   V  E +DW+   P +F +  R
Sbjct: 432 NVPTSLIRQDILPKARYDSSYFQRHGYTVLSGWNNDAEVVDPEMIDWSMISPNHFPYRLR 491

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q+PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D
Sbjct: 492 QEPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQD 551

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              W+   +   +K   TT V +   VPV   Y++AW  +D   QFR DIY  D
Sbjct: 552 -VGWNDARVSSTLKQGSTTYVNIRERVPVQLYYLTAWVAEDGKPQFRTDIYNYD 604



 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 44/141 (31%), Gaps = 33/141 (23%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL          +  LY    Y +     +++ +      + E     Y + +  + 
Sbjct: 138 MLGYLHFISGVGANGSVWLYSNVPYKMAMPPATILNR--WQQAVHEGTTAPYLASLAPQ- 194

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
                                   +  +A+     +  R  WP +   P L  G  S  +
Sbjct: 195 -------------------HPQYEKMHQALKHM--LADRRPWPLMANGPSLRPGQLSDDI 233

Query: 112 QRLRERLIISGDLDPSKGLSV 132
             LRE L  +G L P  G  V
Sbjct: 234 PALREILDRTGMLHPVDGAPV 254


>gi|332162190|ref|YP_004298767.1| hypothetical protein YE105_C2568 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318606244|emb|CBY27742.1| L,D-transpeptidase YcbB [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325666420|gb|ADZ43064.1| hypothetical protein YE105_C2568 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 623

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/292 (33%), Positives = 147/292 (50%), Gaps = 8/292 (2%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           +      +   +  AVK FQ  HGL   G++ + T E +NV    R   L +N+ R++ L
Sbjct: 317 ATVTDNVYTPELMEAVKRFQRWHGLSDDGVIGARTREWLNVSPQTRATLLALNIQRLRIL 376

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +
Sbjct: 377 PGRV--DNGIMVNIPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNV 434

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQD 301
           P S++++D++   R D  Y + +   ++     +   V    +DW+   P NF +  RQ 
Sbjct: 435 PTSLVRQDIVPKARYDSSYFQRHGYTVLSGWSNDAEVVDPSMIDWSMISPNNFPYRLRQA 494

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D  
Sbjct: 495 PGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA- 553

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            W+   +   +K   TT V +   VPV   Y++AW   D   QFR DIY  D
Sbjct: 554 GWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDIYNYD 605


>gi|328474745|gb|EGF45550.1| putative amidase [Vibrio parahaemolyticus 10329]
          Length = 513

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 179/418 (42%), Gaps = 39/418 (9%)

Query: 6   KINKILYCFFVYLILPM----GLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVD 60
           +    L+    ++  P      LS++   I    LD+ +      +  D  F+   A + 
Sbjct: 122 EGVNWLFANKAHVSFPAPSVDTLSVLSNEITVGKLDQFLASLRSPLQKDASFNTVFASLS 181

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                  P               FY+               L +G+   +   L ER+ I
Sbjct: 182 EFSQYQYP---------------FYEQ-----------KGLLRIGDPIENKSTLVERMAI 215

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            G D+         +D  +E AVK FQ  HGL+  G++  +T+  +N     R+  L +N
Sbjct: 216 VGVDVSYIDSEIPQYDENLELAVKEFQRIHGLNQDGVIGPNTIRWINFSPQQRLHLLALN 275

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +   +++     V VN+P   +    +G+    S V+VGR  R+TPI+   ++ ++
Sbjct: 276 AERSRIWAKER--DNVVFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMTGTLDSVI 333

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFI 297
            NP W +P  I+ KD++  ++++P YL ++NI +I        +    ++W +  P  F 
Sbjct: 334 LNPTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFP 393

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q  G  NA+   K    +    Y+HDTP   LF    R  +SGCVRV N   L   
Sbjct: 394 YRMRQASGSHNALGLYKFNMPNPQAIYLHDTPSKNLFQQDRRAFSSGCVRVENADQLAEL 453

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L K      R   +       TT V L   +PVH +Y +AW  ++  + +RDDIY  D
Sbjct: 454 LFKTQGLEERLEKKRESARSSTTSVPLGERIPVHIIYQTAWL-EEGTLYYRDDIYKYD 510


>gi|238795867|ref|ZP_04639380.1| Peptidoglycan-binding domain 1 protein [Yersinia mollaretii ATCC
           43969]
 gi|238720330|gb|EEQ12133.1| Peptidoglycan-binding domain 1 protein [Yersinia mollaretii ATCC
           43969]
          Length = 574

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 102/308 (33%), Positives = 152/308 (49%), Gaps = 9/308 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             +      +   +  AVK FQ+ HGL   G++ + T E +N+    R   L +N+ R++
Sbjct: 266 STTTLTDNIYTPELVEAVKRFQLWHGLSDDGVIGARTREWLNISPQTRATLLALNIQRLR 325

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L  +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W
Sbjct: 326 ILPGKV--DNGIMVNIPNYSLNYYKNGTEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPW 383

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--R 299
            +P S++++D++   R D  Y + +   ++     E   V    +DW+   P NF +  R
Sbjct: 384 NVPTSLVRQDIVPKARYDAGYFQRHGYTVLSGWSNEAEVVDPSMIDWSMISPNNFPYRLR 443

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D
Sbjct: 444 QAPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQD 503

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVG 418
              W+   +   VK   TT V +   VPV   Y++AW   D   QFR DIY  D  V  G
Sbjct: 504 A-GWNDARVSSTVKQGDTTYVNIRQRVPVQLYYLTAWVADDGRPQFRTDIYNYDKTVRSG 562

Query: 419 IIPLPEDH 426
               P+  
Sbjct: 563 AQISPQAE 570



 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 49/159 (30%), Gaps = 39/159 (24%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL          +  LY    Y        +   P  A      +N    ++     
Sbjct: 87  MLGYLHFISGVGANGSVWLYSNVPY-------KMAMPPAMA------LNRWKQAVQEGST 133

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
             +LA +                 +  KA+   Q +  R  WP+L   P L  G  S  +
Sbjct: 134 ATYLASLAPQ---------HPQYDKMHKALK--QMLADRRPWPQLSNGPSLRPGQLSDDI 182

Query: 112 QRLRERLIISGDLDPSKGLSVA------FDAYVESAVKL 144
             LRE L  +G L P     V        D    +AV  
Sbjct: 183 PALREILDRTGMLYPVVATPVKAPEVIPVDNPTVAAVND 221


>gi|304320160|ref|YP_003853803.1| hypothetical protein PB2503_02927 [Parvularcula bermudensis
           HTCC2503]
 gi|303299063|gb|ADM08662.1| hypothetical protein PB2503_02927 [Parvularcula bermudensis
           HTCC2503]
          Length = 572

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 117/404 (28%), Positives = 197/404 (48%), Gaps = 22/404 (5%)

Query: 22  MGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
           M  S  ++P+H+ ++  +             D    +++  I   IP  S     + ++ 
Sbjct: 164 MASSATDRPVHSQLVKSV------------RDAGQGKIERSISPFIP--SNPQYERLQET 209

Query: 82  IAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVE 139
           +  Y+ I   GGW  L + P+   G+    +  LR RL   G LD      S   D  + 
Sbjct: 210 LKTYRQIEEDGGWEALDVGPIVKPGDRHAVISPLRTRLAKEGFLDRQHDNGSPLLDRPLR 269

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           SA+   Q +HG+D  G+    T  A+N PV+ +I +L  +L R ++L    +G +YV  N
Sbjct: 270 SALIAAQAQHGIDEDGVFGPETARALNEPVESKIARLADSLYRWREL--GDLGDKYVWAN 327

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP+   E  +N +  +    I+G+ DR TP    +++ I+ NP W +P SI+Q+D +  L
Sbjct: 328 IPSFRAEGWKNRRKEISMRAIMGQPDRPTPTFSDKVDYIVANPKWYVPSSIMQRDKLPKL 387

Query: 260 RQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSPE-PPNFIFRQDPGKINAMASTKIEFYS 317
           ++DP Y       +ID+  G+ V   EVDW + +    +   Q  GK NA+   KI F +
Sbjct: 388 QRDPGYAARGEYTVIDKTTGEAVSPYEVDWFADDVTARYRLVQGAGKGNALGRIKIIFPN 447

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
           + + Y+HDTP   LF++  R  +SGCVR+ +  ++  W+ +         IE  ++ ++T
Sbjct: 448 QYSVYLHDTPTKSLFDHATRAFSSGCVRLEHPQEMAEWIARTNGQEKVDQIEMALRDKET 507

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY--GLDNVHVGI 419
             V+L+ E+PVH  Y++    +     F  DIY  G D   V +
Sbjct: 508 ERVELSAELPVHITYMTVTVDEAGTPTFWRDIYNKGQDEQLVAM 551


>gi|94967237|ref|YP_589285.1| peptidoglycan binding domain-containing protein [Candidatus
           Koribacter versatilis Ellin345]
 gi|94549287|gb|ABF39211.1| Peptidoglycan-binding domain 1 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 625

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 103/382 (26%), Positives = 175/382 (45%), Gaps = 13/382 (3%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL--SRGGWPELPIRPLHLGNSSVSVQRL 114
             V+  + +  P  +      T+  +  Y ++     G    +P + L  G     + RL
Sbjct: 247 QNVEAELAAVQPQFAG--YKATQAWLQRYIELARQDNGEQLPVPTKALDPGKPYAGIPRL 304

Query: 115 RERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
              L + GDL           + A +  AVK +Q RHGL   G + + T++ +N P+  R
Sbjct: 305 TSLLHLLGDLPADAVVPAGDVYQAPLVDAVKRYQSRHGLTADGRLGAQTVKELNTPLSTR 364

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRV-DRQTPI 230
           + QL++ L R +  L Q+     V+VNIP   L A + N KV L   V+VG+    +TP+
Sbjct: 365 VEQLRLTLERWR-WLPQEFPQPPVVVNIPEFRLRAYDANHKVVLSMNVVVGKALRHETPV 423

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD--- 287
               +  ++F PYW +P SI + +++  +++D  Y+   N  +  + G+ V    +    
Sbjct: 424 FDDEMKYVVFRPYWNVPPSIQRSEIVPAIQRDRDYISKKNYEVTTQAGQVVTSGTISDEV 483

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                      RQ PG  NA+   K+ F ++ N Y+H TP   LF+   R  + GC+RV 
Sbjct: 484 LQQLRAGKLAVRQKPGPTNALGLVKLIFPNQYNVYLHSTPSQQLFSQARRDFSHGCIRVE 543

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTR-KTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
              +L  W L+D P W+   +   ++       V L+  VPV  +Y +A + +D  + F 
Sbjct: 544 KPAELSAWALQDKPEWTVERVRAAMQKGPDNVQVNLSKPVPVLILYGTAVAEEDGSVHFF 603

Query: 407 DDIYGLDNVHVGIIPLPEDHPI 428
           DD+YG D      +     +P+
Sbjct: 604 DDLYGYDADLEKALARGYPYPL 625


>gi|300022492|ref|YP_003755103.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524313|gb|ADJ22782.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 452

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 134/394 (34%), Positives = 203/394 (51%), Gaps = 7/394 (1%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
              ++ D+I             +     +        P  S   I     AI  YQ I+ 
Sbjct: 39  AQMTLWDQIQGSLSGGSAEPAPERKKEPLQDLRPDSTPWRSDAMINAISAAIERYQSIVD 98

Query: 91  RGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKG--LSVAFDAYVESAVKLFQM 147
            GGWP +P   +   G     V  LR+RL ISGD+        S  FD+ +E  VK FQ 
Sbjct: 99  SGGWPVVPTGRMMRSGEDDPRVPILRKRLRISGDMPAKGSYYDSETFDSELEEGVKRFQR 158

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           RHG+  +G ++ S    +N     R+ QL++NL R++ L+   +  RYVLVN+PA  LEA
Sbjct: 159 RHGIRITGRIEQSVYPVLNTTAAERLAQLKLNLQRVQALM-HGIEDRYVLVNVPAFQLEA 217

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           V+  +V LR  VIVGR  RQTP + + I  + F PYW +P S+   D++  L+Q+P YL 
Sbjct: 218 VDKYEVQLRHRVIVGRPQRQTPDVRAMIKALNFFPYWRVPDSVATLDLVPRLKQEPGYLA 277

Query: 268 DNNIHMIDE-KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
           D  I + +   G E+    VDW++P+  ++ F+QDPG  NA+   +I+  +    YMHDT
Sbjct: 278 DEGIRVYNGVNGPELNPATVDWSAPQVASYKFKQDPGDKNALGLLRIDMSNEFGVYMHDT 337

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-YHIEEVVKTRKTTPVKLATE 385
           P   LF    R  ++GCVRV+N+ DL  W+  + P W +   + + +   +   +KL   
Sbjct: 338 PMKNLFGQQSRPFSAGCVRVQNVFDLGDWIAHNEPGWEQPGRVRDTLAAGQPMELKLMHP 397

Query: 386 VPVHFVYISAWSPK-DSIIQFRDDIYGLDNVHVG 418
           +PV+F Y +AW+   +  ++FR DIYG D   + 
Sbjct: 398 IPVYFAYFTAWAEPSNGRVEFRPDIYGRDGAALQ 431


>gi|149911942|ref|ZP_01900540.1| hypothetical protein PE36_11037 [Moritella sp. PE36]
 gi|149804989|gb|EDM65018.1| hypothetical protein PE36_11037 [Moritella sp. PE36]
          Length = 409

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 125/397 (31%), Positives = 208/397 (52%), Gaps = 19/397 (4%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVND---RFDNFLARVDMGIDSDIPIISKETIAQTEK 80
           +S++ K  H +      N  +++ VN    + DN L ++D    SD P+ SK+ +  + +
Sbjct: 18  VSMLGKTTHMTNSMNTTNNKHYAYVNHSNIQPDNLLPKMDA--VSDAPV-SKKVLQFSSR 74

Query: 81  AIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           A ++   +  +  W ++ + R LH+G+SS +V  +  RLI+ GD + S   S  +   + 
Sbjct: 75  A-SYLNWLSVQYSWEDIALSRLLHIGDSSAAVHEIHSRLILLGDSEESLRFSDVYTVEIA 133

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +AV+ FQ RHGL    ++   TL+ +N+    R   L+ N+      +   +  RY+LVN
Sbjct: 134 AAVRNFQRRHGLKADAIIGPDTLKWLNINPQRRAELLRQNMEEKIHFMA-NLSDRYLLVN 192

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IPA  L   +NG++ LRS VIVG+  + TPIL S I+ ++ NP W +PRSI++ D++  +
Sbjct: 193 IPAYELLLSDNGEIALRSRVIVGKPKKPTPILTSEISSMVINPSWRVPRSILEDDLLPKV 252

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYS 317
           + + ++    N  + + + + +     +W       F +R  Q PG  NA+   K  F +
Sbjct: 253 KMNGEFFSQRNFKVFNYQNQTIEKSPQEWQKLAYGQFPYRLEQMPGTQNALGRYKFYFPN 312

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEEVVK 373
             + Y+HDT  P LF+N  R  +SGC+R+  + +L  W    L+ + P WSR  I     
Sbjct: 313 DFSVYLHDTSNPQLFSNANRALSSGCIRIEKVDELANWIANSLVDNKPLWSRLKINR--- 369

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
              T    L   +PVH VY +AW   + + QFRDDIY
Sbjct: 370 -ETTKWFPLNDVLPVHLVYWTAWIDDNGLSQFRDDIY 405


>gi|311747884|ref|ZP_07721669.1| putative peptidoglycan binding protein [Algoriphagus sp. PR1]
 gi|126575878|gb|EAZ80188.1| putative peptidoglycan binding protein [Algoriphagus sp. PR1]
          Length = 548

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 99/329 (30%), Positives = 173/329 (52%), Gaps = 3/329 (0%)

Query: 94  WPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGL 151
           W ++ I + +H+G+S+  + RLRERLI    L+         +D+ +   +K FQ  HGL
Sbjct: 219 WKKVKISKSIHVGDSNSDIPRLRERLIYWELLEEYAVQDEKVYDSIMMDGIKDFQGTHGL 278

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           D  G++   T +A N     R+ + +VN+ R++ L +      ++LVN+    L+ ++N 
Sbjct: 279 DIDGVIGPQTAQAFNDSPKDRLNKARVNMERLRWLPDTVKNAEFILVNLANFQLDYLKNL 338

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
              +   VIVGR   ++PI  + ++ I+F+PYW IP SI   +++  +R++P Y+   N+
Sbjct: 339 DTLISERVIVGRKYHESPIFMAEMSYIVFSPYWNIPYSITHSEIIPSVRKNPNYIAAKNM 398

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            ++   GK +    ++WNS +   ++ RQ PG  N++   K  F +++N Y+HDT    L
Sbjct: 399 EVVTSSGKVLDPSTINWNS-KSFPYMVRQKPGPGNSLGLVKFMFPNKHNVYIHDTNARSL 457

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F    R  + GC+R++N  D    LL   P W+   I+E +       V+L   +PV  V
Sbjct: 458 FALDDRARSHGCIRIQNPQDFAKELLSYDPYWTSEKIDEAMHQTHEKVVQLDRHIPVVLV 517

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           Y++ W+       FR+DIY  D   +  +
Sbjct: 518 YLTFWADSKGEAHFREDIYERDEEVLVAL 546


>gi|255035938|ref|YP_003086559.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
 gi|254948694|gb|ACT93394.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
          Length = 540

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 116/407 (28%), Positives = 187/407 (45%), Gaps = 33/407 (8%)

Query: 14  FFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF-DNFLARVDMGIDSDIPIISK 72
           FF Y  L       +K I+   L+  I      +  + F D+ L      + +  P+   
Sbjct: 145 FFRYTDLAYS---GDKRINTQELNWFI--PRRKLNPEVFLDSLLKNKGQNVAAYEPV--N 197

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
                 ++ +  Y  I   G    +   +    G+    +  L+ RL + GDL P    +
Sbjct: 198 RHYNLLKQKVLEYYTITKNGEPAAVDTDKKFREGDRDTLITALKTRLHLLGDL-PEPDST 256

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FD  + +AVK FQ R G   +G+   +  + +NVPV  RIRQ+ +N+ RI+  +    
Sbjct: 257 PVFDTTLTAAVKHFQQRVGQKQTGVTGPAFFKELNVPVTARIRQMLINMERIR-WMPAAP 315

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
              Y+LVNIP  +L A E+GK+     V+VG     T I    +N+++F+PYW +P SI+
Sbjct: 316 PTDYILVNIPEFTLHAYEDGKLSFDMVVVVGSEANSTVIFSGTLNQVVFSPYWNVPTSIL 375

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
           +K+++  ++++P YL  +N+                WN         RQ PGK N++   
Sbjct: 376 KKEVLPGIKKNPNYLARHNME---------------WNGGS-----VRQKPGKSNSLGLV 415

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F +  + Y HDTP   LF    R  + GC+R+     +  WLL+   TW+   I   
Sbjct: 416 KFLFPNSYSIYFHDTPSKSLFKESQRAFSHGCIRLAEPKKMAEWLLRRDSTWTSEKITAA 475

Query: 372 VKTRKTTPVKL--ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           + + K   V+L    EVPV   Y ++W  +   +QFR D+YG D   
Sbjct: 476 MNSGKEKYVRLRGKNEVPVFIGYFTSWVDQHGNLQFRKDVYGHDRRM 522


>gi|163803521|ref|ZP_02197391.1| GTP cyclohydrolase II [Vibrio sp. AND4]
 gi|159172697|gb|EDP57548.1| GTP cyclohydrolase II [Vibrio sp. AND4]
          Length = 521

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 108/418 (25%), Positives = 179/418 (42%), Gaps = 38/418 (9%)

Query: 6   KINKILYCFFVYLILP----MGLSLVEKPIHASVLDEIINESYHSI-VNDRFDNFLARVD 60
           +    L+    ++ LP      LSL+   I    LD+ +      + + D F+   A + 
Sbjct: 129 EGLNWLFASKAHVKLPGPSIETLSLLSNEITVGKLDQFLAGLRSPLQMEDSFNTAFASLS 188

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                  P                YQ             R   +G++      L  R+ I
Sbjct: 189 TYAKFKFP---------------RYQQ----------DKRLARVGDALFDKASLIARMQI 223

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            G ++      S  +D  +E AV  FQ  HGL   G++  +TL  +N     R+  L +N
Sbjct: 224 VGVEVGHLDTESRLYDDNLELAVMEFQRIHGLKQDGVIGPNTLRWVNFSPQQRLHSLALN 283

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +   +++     V VN+P   +    +G+    S V+VG+  R+TPI+   ++ ++
Sbjct: 284 AERSRIWSKKR--DNVVFVNVPGYEVTYWHDGRPLFESKVVVGKASRKTPIMTGTMDSVI 341

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFI 297
            NP W +P  I+ KD++  ++++P YL ++NI +I        +    ++W +  P  F 
Sbjct: 342 LNPTWNVPWKIMVKDIIPKVKRNPMYLIEHNIQIIRSWSSREVIDPTTINWATVNPKTFP 401

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q  G  NA+   K    +    Y+HDTP   LFN   R  +SGCVRV +   L   
Sbjct: 402 YRMRQSSGSHNALGLYKFNMPNPQAIYLHDTPSKNLFNEDRRAFSSGCVRVEHADQLAEL 461

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L K     +R   +     R  T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 462 LFKTQGLEARLERKRQSGRRSNTSVPLTERIQVHIIYQTAWL-EEGTLYYRDDIYQYD 518


>gi|126729661|ref|ZP_01745474.1| peptidoglycan binding protein, putative [Sagittula stellata E-37]
 gi|126709780|gb|EBA08833.1| peptidoglycan binding protein, putative [Sagittula stellata E-37]
          Length = 540

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 110/419 (26%), Positives = 201/419 (47%), Gaps = 20/419 (4%)

Query: 11  LYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDM-GIDSDIPI 69
           L   F+     +   +++ P        +I++    +     +  L+R+     D+    
Sbjct: 120 LSKLFISFANDLQTGVLDDP------GAVISDIKREVPRRAPEELLSRLTTERPDAVFRS 173

Query: 70  ISKET--IAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           +   T   ++  +A    +  +  GGW P +    L  G S  +V  LR RL+    L P
Sbjct: 174 LVPPTAEYSRLMRAKLMLEHRIRHGGWGPVVQASSLEPGESGQAVVALRNRLVAMNYLKP 233

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           S  L+  +D  + +AV+  Q  HGL+  G+  +STL A+N   + R++ + V + R + L
Sbjct: 234 S--LTTRYDEDMTAAVRAVQEDHGLNVDGVAGASTLRAINAAPEERLKSIMVAMERERWL 291

Query: 187 -LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPY 243
              +  G R+VLVN+     + +++ KV   +  ++G+     +TP     +  ++ NPY
Sbjct: 292 NSPEGRGKRHVLVNLVDFHAQIIDDDKVTFETRSVIGQNQSTHRTPEFSDTMEHMVINPY 351

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQD 301
           W +PRSII  + + LLR +P      ++ +ID +G+ V   +  +      +F +  RQ 
Sbjct: 352 WYVPRSIIVNEYLPLLRSNPG--AAGHLEIIDGRGRVVSRGQ-SFAQYSGRSFPYSMRQR 408

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  NA+ + K  F ++ N Y+HDTP   LF+  VR  + GCVR+ +  D    LL    
Sbjct: 409 PGPRNALGTVKFMFPNKYNIYLHDTPSQSLFSREVRTFSHGCVRLNDPHDFAYALLSRQE 468

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
                  + ++++ + T V LA  +PVH +Y +A++     + +R+D+YG D +    +
Sbjct: 469 RDPVNFFQSILRSGQNTKVPLAEPIPVHLIYRTAFTQAKGNVNYRNDVYGRDEILWRAL 527


>gi|28898690|ref|NP_798295.1| putative amidase [Vibrio parahaemolyticus RIMD 2210633]
 gi|28806908|dbj|BAC60179.1| putative amidase [Vibrio parahaemolyticus RIMD 2210633]
          Length = 529

 Score =  398 bits (1023), Expect = e-108,   Method: Composition-based stats.
 Identities = 105/418 (25%), Positives = 180/418 (43%), Gaps = 39/418 (9%)

Query: 6   KINKILYCFFVYLILPM----GLSLVEKPIHASVLDEIINESYHSI-VNDRFDNFLARVD 60
           +    L+    ++  P      LS++   I    LD+ +      + ++  F+   A + 
Sbjct: 138 EGVNWLFANKAHVSFPAPSVDTLSVLSNEITVGKLDQFLASLRSPLQMDASFNTVFASLS 197

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                  P   ++ ++                           +G+   +   L ER+ I
Sbjct: 198 EFSQYQYPFYEQKGLS--------------------------RVGDPIENKSTLVERMAI 231

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            G D+         +D  +E AVK FQ  HGL+  G++  +T+  +N     R+  L +N
Sbjct: 232 VGVDVSYIDSEIPQYDENLELAVKEFQRIHGLNQDGVIGPNTIRWINFSPQQRLHLLALN 291

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +   +++     V VN+P   +    +G+    S V+VGR  R+TPI+   ++ ++
Sbjct: 292 AERSRIWAKER--DNVVFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMTGTLDSVI 349

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFI 297
            NP W +P  I+ KD++  ++++P YL ++NI +I        +    ++W +  P  F 
Sbjct: 350 LNPTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFP 409

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q  G  NA+   K    +    Y+HDTP   LF    R  +SGCVRV N   L   
Sbjct: 410 YRMRQASGSHNALGLYKFNMPNPQAIYLHDTPSKNLFQQDRRAFSSGCVRVENADQLAEL 469

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L K      R   +       TT V L   +PVH +Y +AW  ++  + +RDDIY  D
Sbjct: 470 LFKTQGLEERLEKKRESARSSTTSVPLGERIPVHIIYQTAWL-EEGTLYYRDDIYKYD 526


>gi|262393898|ref|YP_003285752.1| L,D-transpeptidase YcbB [Vibrio sp. Ex25]
 gi|262337492|gb|ACY51287.1| L,D-transpeptidase YcbB [Vibrio sp. Ex25]
          Length = 513

 Score =  398 bits (1023), Expect = e-108,   Method: Composition-based stats.
 Identities = 105/418 (25%), Positives = 180/418 (43%), Gaps = 39/418 (9%)

Query: 6   KINKILYCFFVYLILPM----GLSLVEKPIHASVLDEIINESYHSIVNDR-FDNFLARVD 60
           +    L+    ++ILP      LS++   I    L + +      +  D  F +  + + 
Sbjct: 122 EGINWLFANKAHVILPAPSIDTLSVLSNEITVGKLSQFLASLRSPLQTDEAFYSAYSSLS 181

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                  PI  +  +A                           +G+   +   L ER+ +
Sbjct: 182 EHAKYQYPIYEQTGLA--------------------------RVGDQLENKPLLIERMEV 215

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            G D+      +  +D  +E AVK FQ  HGL   G++  +T+  +N     R+  L +N
Sbjct: 216 VGVDVSYLDITTQQYDEELELAVKEFQRIHGLKEDGVIGPNTIRWINFSPQERLHLLALN 275

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +   + +     V VN+P   +    +G+    S V+VGR  R+TPI+   ++ ++
Sbjct: 276 SERSRIWSKDR--DNVVFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMSGTLDSVI 333

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEPPNFI 297
            NP W +P +I+ KD++  ++++P YL ++NI +I      + +    ++W +  P  F 
Sbjct: 334 LNPTWNVPWTIMVKDIIPKVKRNPMYLINHNIQIIRSWTSNEIIDPTTINWATVNPRTFP 393

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q  G  NA+   K    +    Y+HDTP   LF    R  +SGCVRV +   L   
Sbjct: 394 YRMRQASGLHNALGLYKFNMPNPQAIYLHDTPSKNLFERDRRAFSSGCVRVEHADQLAEL 453

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L K      R   +     R  T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 454 LFKTQGLEERLAKKRESTRRSNTSVPLGERIQVHIIYQTAWL-EEGTLYYRDDIYKYD 510


>gi|238757635|ref|ZP_04618819.1| Peptidoglycan-binding domain 1 protein [Yersinia aldovae ATCC
           35236]
 gi|238704140|gb|EEP96673.1| Peptidoglycan-binding domain 1 protein [Yersinia aldovae ATCC
           35236]
          Length = 603

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 96/297 (32%), Positives = 147/297 (49%), Gaps = 8/297 (2%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           +  +      +   + +AVK FQ   GL   G++   T E +NV    R   L +N+ R+
Sbjct: 294 ITTTPITDNVYTPELVAAVKRFQQWQGLTDDGVIGVRTREWLNVSPQTRATLLALNIQRL 353

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + L         ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP 
Sbjct: 354 RILPGHV--DNGIMVNIPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMSSALNNVVVNPP 411

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF-- 298
           W +P S++++D++   R D  Y + +   ++     +   V    +DW+   P NF +  
Sbjct: 412 WNVPTSLVRQDIVPKARYDSGYFQRHGYTVLSGWSNDAQVVDPSMIDWSMISPNNFPYRL 471

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+
Sbjct: 472 RQAPGSSNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQ 531

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           D   W+   +   +K   TT V +   +PV   Y++AW  +D   QFR DIY  D  
Sbjct: 532 DA-GWNDARVSSTLKQGDTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYDKT 587


>gi|260363711|ref|ZP_05776495.1| putative amidase [Vibrio parahaemolyticus K5030]
 gi|260879722|ref|ZP_05892077.1| putative amidase [Vibrio parahaemolyticus AN-5034]
 gi|260898804|ref|ZP_05907245.1| putative amidase [Vibrio parahaemolyticus Peru-466]
 gi|260901617|ref|ZP_05910012.1| putative amidase [Vibrio parahaemolyticus AQ4037]
 gi|308086665|gb|EFO36360.1| putative amidase [Vibrio parahaemolyticus Peru-466]
 gi|308093310|gb|EFO43005.1| putative amidase [Vibrio parahaemolyticus AN-5034]
 gi|308108675|gb|EFO46215.1| putative amidase [Vibrio parahaemolyticus AQ4037]
 gi|308113388|gb|EFO50928.1| putative amidase [Vibrio parahaemolyticus K5030]
          Length = 513

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 105/418 (25%), Positives = 180/418 (43%), Gaps = 39/418 (9%)

Query: 6   KINKILYCFFVYLILPM----GLSLVEKPIHASVLDEIINESYHSI-VNDRFDNFLARVD 60
           +    L+    ++  P      LS++   I    LD+ +      + ++  F+   A + 
Sbjct: 122 EGVNWLFANKAHVSFPAPSVDTLSVLSNEITVGKLDQFLASLRSPLQMDASFNTVFASLS 181

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                  P   ++ ++                           +G+   +   L ER+ I
Sbjct: 182 EFSQYQYPFYEQKGLS--------------------------RVGDPIENKSTLVERMAI 215

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            G D+         +D  +E AVK FQ  HGL+  G++  +T+  +N     R+  L +N
Sbjct: 216 VGVDVSYIDSEIPQYDENLELAVKEFQRIHGLNQDGVIGPNTIRWINFSPQQRLHLLALN 275

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +   +++     V VN+P   +    +G+    S V+VGR  R+TPI+   ++ ++
Sbjct: 276 AERSRIWAKER--DNVVFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMTGTLDSVI 333

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFI 297
            NP W +P  I+ KD++  ++++P YL ++NI +I        +    ++W +  P  F 
Sbjct: 334 LNPTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFP 393

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q  G  NA+   K    +    Y+HDTP   LF    R  +SGCVRV N   L   
Sbjct: 394 YRMRQASGSHNALGLYKFNMPNPQAIYLHDTPSKNLFQQDRRAFSSGCVRVENADQLAEL 453

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L K      R   +       TT V L   +PVH +Y +AW  ++  + +RDDIY  D
Sbjct: 454 LFKTQGLEERLEKKRESARSSTTSVPLGERIPVHIIYQTAWL-EEGTLYYRDDIYKYD 510


>gi|153839457|ref|ZP_01992124.1| putative amidase [Vibrio parahaemolyticus AQ3810]
 gi|149747014|gb|EDM58002.1| putative amidase [Vibrio parahaemolyticus AQ3810]
          Length = 509

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 105/418 (25%), Positives = 180/418 (43%), Gaps = 39/418 (9%)

Query: 6   KINKILYCFFVYLILPM----GLSLVEKPIHASVLDEIINESYHSI-VNDRFDNFLARVD 60
           +    L+    ++  P      LS++   I    LD+ +      + ++  F+   A + 
Sbjct: 118 EGVNWLFANKAHVSFPAPSVDTLSVLSNEITVGKLDQFLASLRSPLQMDASFNTVFASLS 177

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                  P   ++ ++                           +G+   +   L ER+ I
Sbjct: 178 EFSQYQYPFYEQKGLS--------------------------RVGDPIENKSTLVERMAI 211

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            G D+         +D  +E AVK FQ  HGL+  G++  +T+  +N     R+  L +N
Sbjct: 212 VGVDVSYIDSEIPQYDENLELAVKEFQRIHGLNQDGVIGPNTIRWINFSPQQRLHLLALN 271

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +   +++     V VN+P   +    +G+    S V+VGR  R+TPI+   ++ ++
Sbjct: 272 AERSRIWAKER--DNVVFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMTGTLDSVI 329

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFI 297
            NP W +P  I+ KD++  ++++P YL ++NI +I        +    ++W +  P  F 
Sbjct: 330 LNPTWNVPWKIMVKDIIPKVKRNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFP 389

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q  G  NA+   K    +    Y+HDTP   LF    R  +SGCVRV N   L   
Sbjct: 390 YRMRQASGSHNALGLYKFNMPNPQAIYLHDTPSKNLFQQDRRAFSSGCVRVENADQLAEL 449

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L K      R   +       TT V L   +PVH +Y +AW  ++  + +RDDIY  D
Sbjct: 450 LFKTQGLEERLEKKRESARSSTTSVPLGERIPVHIIYQTAWL-EEGTLYYRDDIYKYD 506


>gi|270261208|ref|ZP_06189481.1| hypothetical protein SOD_a04330 [Serratia odorifera 4Rx13]
 gi|270044692|gb|EFA17783.1| hypothetical protein SOD_a04330 [Serratia odorifera 4Rx13]
          Length = 611

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 97/309 (31%), Positives = 151/309 (48%), Gaps = 9/309 (2%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P      A+   +   VK FQ   GL   G++ + T E +NV    R   L +N+ R++ 
Sbjct: 304 PVTVTDNAYTPDLVEGVKRFQKWQGLTADGVIGARTREWLNVSPQTRASLLALNIQRLRI 363

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L         ++VNIP  SL   +NG   L S VIVGR  R+TP+++S +N ++ NP W 
Sbjct: 364 LPGYV--DTGIMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMNSALNNVVVNPPWN 421

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQ 300
           +P +++++D++    +D  Y + +   ++     +   +    +DWN     NF +  RQ
Sbjct: 422 VPTTLVREDIVPKAMRDGSYFQKHGYTVLSGWSNDAEVINPAMIDWNMVSARNFPYRIRQ 481

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D 
Sbjct: 482 APGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLLQDA 541

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGI 419
             W+   +   +K   TT V +   +PV   Y++AW   D   QFR DIY  D+ V  G 
Sbjct: 542 -GWNNTRVSSTLKGGNTTYVNIRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDDTVRSGA 600

Query: 420 IPLPEDHPI 428
             L +   +
Sbjct: 601 QILAQAEKL 609



 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 33/141 (23%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N  LY    Y +                 + +IN+   ++   + 
Sbjct: 130 MLGYLQFVSAIGANGNSWLYSNIPYKLGL-------------PPNAVINQWQLAVRQGKT 176

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
             ++ ++                A+  +A+     +     WP++   P L     S  +
Sbjct: 177 LAYVTKLAPQ---------HPQYAKMHQALRDM--LADNRPWPQMANGPSLRPDQLSSDI 225

Query: 112 QRLRERLIISGDLDPSKGLSV 132
             LRE L  +G L  +   + 
Sbjct: 226 AALREILARNGMLTAASVQTQ 246


>gi|311747883|ref|ZP_07721668.1| peptidoglycan binding domain-containing protein [Algoriphagus sp.
           PR1]
 gi|126575877|gb|EAZ80187.1| peptidoglycan binding domain-containing protein [Algoriphagus sp.
           PR1]
          Length = 562

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 171/341 (50%), Gaps = 6/341 (1%)

Query: 94  WPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-FDAYVESAVKLFQMRHGL 151
           W ++   + L +G+ + SV +LRERL   G LD  +      FD+ +   +K +Q+ +G+
Sbjct: 221 WKQVSFEQSLKVGDRNQSVPKLRERLQFWGFLDTYETEDELLFDSTMWEGLKKYQIENGM 280

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            P G +   T   +N   +  I    VN+ R++ L E       VLVNI    L+ ++ G
Sbjct: 281 KPDGAIGDLTAGFLNDSPEKLIDIASVNMERMRWLPEINWDEELVLVNIANYQLDYLDKG 340

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
              L + VIVG+   ++P+  + ++ I+F+PYW IP SI Q +++  L+++  YL++ N+
Sbjct: 341 DTTLSAKVIVGKEYNESPVFSAPMSYIVFSPYWNIPSSITQDEILPSLKKNKAYLQEKNM 400

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            ++   G+ +   +V+W   +   F F  RQ PG  N++   K  F +  N Y+HDTP  
Sbjct: 401 EVVSNTGEVLDPNKVNWKEKDGEEFPFRIRQKPGGSNSLGLVKFMFPNDYNIYIHDTPAR 460

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  + GC+R++        LL+D   W+   I E +       VKL  EVPV 
Sbjct: 461 SLFQRESRALSHGCIRIQYPDQFAKSLLRD-KKWTTEKISEAMHQENEEVVKLNREVPVL 519

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP-LPEDHPID 429
            +Y++ W+       FR DIY  D   +  +   P+   I+
Sbjct: 520 LLYLTFWTDDKGQGHFRPDIYNRDAELLKALRSAPKAESIE 560


>gi|89068811|ref|ZP_01156194.1| hypothetical protein OG2516_03630 [Oceanicola granulosus HTCC2516]
 gi|89045581|gb|EAR51644.1| hypothetical protein OG2516_03630 [Oceanicola granulosus HTCC2516]
          Length = 550

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 110/350 (31%), Positives = 178/350 (50%), Gaps = 8/350 (2%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
             +     +  +A    Q  L+ GG+       L  G +   V  LR+RL   G L PS 
Sbjct: 187 APTSPEYQRLLRARMEMQRQLNAGGYGPTVSASLERGATGEQVVALRDRLTAMGFLAPS- 245

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
            +S+ FDA +E+AV+ FQ+  GL   G+V  +TL+A+NVP++ R+R + V + R + +  
Sbjct: 246 -VSMEFDAALEAAVRRFQVSVGLTADGVVGGATLDAINVPLEERLRMVLVAMERERWMNN 304

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVI 246
            + G R++ VN+   +   V+ G V  R+  ++G    DRQTP     ++ ++ NP W +
Sbjct: 305 LERGQRHIWVNLVDYTAAVVDEGHVTFRTKSVIGAGDADRQTPEFSDVMDHMVINPSWYV 364

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGK 304
           PRSI   + +  LR++   +   ++ +ID  G+ V    V+++      F +  RQ PG 
Sbjct: 365 PRSITVNEYLPSLRRNRNAVS--HLQVIDRNGRVVNRNSVNFSQYNARTFPYSMRQPPGS 422

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   K  F +R N Y+HDTP   LF+  VR  + GC+R+ +  +    LL       
Sbjct: 423 SNALGQVKFMFPNRYNIYLHDTPSQHLFSETVRTFSHGCIRLDDPYEFAHALLAAQEDDP 482

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
               +  + +   T V L T VPVH VY +A++  D ++ FR D YG D 
Sbjct: 483 VGFFQTRLDSGNETRVNLETPVPVHLVYRTAFTTADGVVNFRPDAYGRDG 532


>gi|146302694|ref|YP_001197285.1| hypothetical protein Fjoh_4967 [Flavobacterium johnsoniae UW101]
 gi|146157112|gb|ABQ07966.1| hypothetical lipoprotein [Flavobacterium johnsoniae UW101]
          Length = 523

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 181/374 (48%), Gaps = 28/374 (7%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI----RPLHLGNSS 108
           D+   +  +  D    + S     +   A+  Y++I   GGW  + I    + L LG+SS
Sbjct: 171 DSIFEKSTINDDKKSKMFS--QYYKLRDALKRYREIEKNGGWKTIEIDDAYKSLKLGDSS 228

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V ++RERL I+ D+      S   D+ +   +K +++ HG  P   +    +  +N+P
Sbjct: 229 PIVSQIRERLFITQDIK-EDNKSAVCDSTLIKGLKSYELHHGFAPKNTILPEHITDLNIP 287

Query: 169 VDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
           V  RI+ + VN+ R + +  + + G +Y+ VNIP   L  + + ++   S V+VG+   +
Sbjct: 288 VSDRIKTIIVNMERCRWIDPKLEKGQQYIEVNIPEFKLYLIRDRQIAFTSPVVVGKAMTK 347

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           T I    ++ I+F+PYW +P SII K++   + ++  YL   N+                
Sbjct: 348 TVIFSGTMSNIVFSPYWNVPPSIIAKEIKPGMAKNKNYLAQKNLE--------------- 392

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
           WN     N   RQ PGK N++   K  F + +N Y+HDTP   LF    R  + GCVRV 
Sbjct: 393 WN-----NGAVRQLPGKNNSLGLVKFLFPNSSNIYLHDTPSKSLFERESRAFSHGCVRVA 447

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
              +L + +LK+ P W+   I++ +   K +   +  + PV+  Y +AW  ++  + F  
Sbjct: 448 KPRELAIEILKEDPKWTEARIDKAMHAGKESWYTIKKKFPVYIGYFTAWVDREGNLNFYK 507

Query: 408 DIYGLDNVHVGIIP 421
           DIY  D   + ++ 
Sbjct: 508 DIYQRDESLLKLLT 521


>gi|326795030|ref|YP_004312850.1| ErfK/YbiS/YcfS/YnhG family protein [Marinomonas mediterranea MMB-1]
 gi|326545794|gb|ADZ91014.1| ErfK/YbiS/YcfS/YnhG family protein [Marinomonas mediterranea MMB-1]
          Length = 562

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 95/400 (23%), Positives = 190/400 (47%), Gaps = 14/400 (3%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISK--ETIAQTEKAIAFYQDILSRGGWPELP 98
           N    +   D  +         + + +P+++         +K + +YQ++  +    ++ 
Sbjct: 166 NWQLDAPSEDWKNILWLSSATDMVNSLPLLAPRHPHYQILQKWLVYYQELADKEPDIKVN 225

Query: 99  IR-PLHLGNSSVSVQRLRERLIISGDL--DPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +  PL LG+    V +LR RLI  GD+     K     FD  ++ A+  FQ RH L   G
Sbjct: 226 VGVPLTLGDEGPRVAQLRARLIQLGDIRFSTRKVNEDQFDERLKDALINFQRRHHLTADG 285

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
              S T++ +N+P+  R++Q+  NL R +  L  ++    + V++    +    NG+   
Sbjct: 286 AAGSKTIQTLNIPLKERVKQINYNLERWR-WLPSRLEADRIWVDLTDYKVHTHLNGETQ- 343

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
              V++G+  R+TP+ + ++  ++ NP W +P  I +++++  ++++P YL  +   +  
Sbjct: 344 SMRVVIGKPARKTPVFYGKMTYMVTNPTWRVPHRIARENLLPKIKENPDYLAKHGYKVFA 403

Query: 276 EKG---KEVFVEEVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
                 K++    ++W + +     + F Q+    NA+   K  F ++N+ Y+HDTP   
Sbjct: 404 NWSASAKQLDPTTINWKAIDQSKLSYRFEQNADDGNALGLYKFMFPNKNDIYLHDTPAKH 463

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LF  V R  +SGCVR+ +  +    LL+   + S   + E + + +T  + L   +PV+ 
Sbjct: 464 LFKEVDRAYSSGCVRLEHPDEFAELLLE--GSDSEDKMNEAMNSGETKVITLPQYLPVYL 521

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPIDS 430
           VY +     + + +FR+D+Y  D +    +      P DS
Sbjct: 522 VYFTVVPNDNGMPEFRNDVYKRDKLMEEAMGYAPFSPSDS 561


>gi|126666378|ref|ZP_01737357.1| hypothetical protein MELB17_12356 [Marinobacter sp. ELB17]
 gi|126629179|gb|EAZ99797.1| hypothetical protein MELB17_12356 [Marinobacter sp. ELB17]
          Length = 566

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 182/381 (47%), Gaps = 20/381 (5%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP--LHLGNSSVSVQR 113
             R +       P  +     +    +A+Y++I   GGW +LP RP  L  G+    V  
Sbjct: 161 AQRFEQAFSLARPYPAP--YQRLRAGLAYYRNIQLEGGWQQLPQRPQSLRPGDVDADVPL 218

Query: 114 LRERLIISGDLDPSKGLSVA-----------FDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           LR+RL + G L     +S             +D  +  AV+LFQ  H L+  G+V   T 
Sbjct: 219 LRQRLAMIGGLGLQNAMSAVQPEEQTATLLEYDEAMVGAVRLFQRHHLLEADGIVGQQTR 278

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            A NV VD RI Q++ NL R + LL  +    ++LV+I    +          RS ++VG
Sbjct: 279 NAFNVSVDERINQIRANLERARWLLHGE-ASAFILVDIAGYRISYFRPNGEIWRSRIVVG 337

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +  R TP L S I  +  NP W +P +I ++D +  +R D  YL   N+ ++D +G+ + 
Sbjct: 338 QPYRSTPSLRSEITHLTVNPTWTVPPTIYREDSLPKIRDDIGYLYRQNMSVLDLRGQRLD 397

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            +++DW    P + + RQ PG +NA+    + F + +  Y+HDTP   LF    R  +SG
Sbjct: 398 PQQIDWW--NPGSIMLRQGPGPMNALGQLVLRFPNNHLVYLHDTPAQALFGRQQRAFSSG 455

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           C+RV+ I +L   L  DT   +   ++ ++ T  T  +KL   +PV   Y +    +D  
Sbjct: 456 CIRVQGITELAQLLFDDT--DTAADVKALIATGDTRNIKLRRTMPVILHYWTVHPGEDGE 513

Query: 403 IQFRDDIYGLDNVHVGIIPLP 423
           + FR DIY  D      +  P
Sbjct: 514 LVFRPDIYQQDARLQKALDQP 534


>gi|121592583|ref|YP_984479.1| peptidoglycan-binding domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604663|gb|ABM40403.1| Peptidoglycan-binding domain 1 protein [Acidovorax sp. JS42]
          Length = 533

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 121/423 (28%), Positives = 183/423 (43%), Gaps = 20/423 (4%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDR--FDNFLARVDMGIDSDIPIISKETIAQTEKAIA 83
           L    I  + L+E  + S     + R      LA   +    D  I            +A
Sbjct: 100 LHGGRIDPARLNERYDHSRRPQPDLRAALQTALADGQIQQARDAAIPRVPMYPALRALLA 159

Query: 84  FYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDP-------SKGLSV 132
            Y+ + +   W    P LP R L  G     +  L ERL+  GDL P       +     
Sbjct: 160 QYRAMGAHPAWAQPLPALPGRKLTPGQPWEGLGVLAERLVALGDLPPQPTGEPPAASAPA 219

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +   +  AV  FQ RHGL+  G++ ++TL A+NVP   R  Q+ + + R++       G
Sbjct: 220 QYAPALVEAVTAFQRRHGLEADGVLGATTLAALNVPPAARAEQIALQMERLR-WTPVLQG 278

Query: 193 LRYVLVNIPAASLEAVE--NGKVGLR--STVIVGRV-DRQTPILHSRINRIMFNPYWVIP 247
            R + VN+P   L A E   G++ LR    VIVG+  D +TP+    +  I F+PYW IP
Sbjct: 279 PRMIAVNVPEYRLRAYEYAGGRITLRLSMAVIVGKALDTRTPLFDEDMQSIEFSPYWNIP 338

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + +++  LR+DP YL    +  +   G           +        RQ PG +NA
Sbjct: 339 PSIARGEIVPRLRRDPGYLARQGMEFVSAAGVSTDATPEMLGAVLAGQARIRQRPGPLNA 398

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    + +N Y+H T  P LF    R  + GCVRV   + L  ++L+D PTW+   
Sbjct: 399 LGDIKFVLPNNDNIYLHHTSAPTLFGRSRRDLSHGCVRVEEPVALAQFVLQDDPTWTVER 458

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
           I   +   K   V+L   VPV   +I+    +D    F  D+YG D     ++      P
Sbjct: 459 IRAAMAQPKPVFVRLPHPVPVIITHITVVV-QDGRPHFYGDLYGHDRKLASLLRQHSAKP 517

Query: 428 IDS 430
            D+
Sbjct: 518 YDA 520


>gi|322832248|ref|YP_004212275.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
 gi|321167449|gb|ADW73148.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
          Length = 616

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 94/307 (30%), Positives = 149/307 (48%), Gaps = 9/307 (2%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P       +   +  AVK FQ   GL+  G++   T + +N    LR   L +N+ R++ 
Sbjct: 309 PVAVADNQYTPDLVEAVKRFQKWQGLEADGIIGGRTRQWLNASPQLRATLLALNIQRLRI 368

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L         ++VNIP   L    NG   L S VIVGR  R+TP++ S +N ++ NP W 
Sbjct: 369 LPGNV--NTGIMVNIPNYQLTYYLNGNEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWN 426

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQ 300
           +P +++++D++     +P Y + +   ++     +   +    +DW    P +F +  RQ
Sbjct: 427 VPTTLVREDIVPKAMNNPGYFQQHGYQVLSGWSNDAEVIDPSMIDWAMISPNHFPYRIRQ 486

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF+  +R  +SGCVRV    +L   LL+D 
Sbjct: 487 APGVSNSLGRYKFNMPSSDAIYLHDTPNHNLFSKDIRALSSGCVRVNKASELANMLLQDA 546

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGI 419
             W+   I   ++   TT V +   +PV   Y++AW   D   QFR DIY  D+ V  G 
Sbjct: 547 -GWNDTRISSALQGGNTTYVAIRHHIPVKLFYLTAWVADDGKPQFRTDIYNYDSTVRSGA 605

Query: 420 IPLPEDH 426
             LP+  
Sbjct: 606 QILPQAE 612



 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 43/142 (30%), Gaps = 33/142 (23%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         +K LY    Y +    L              +IN+   ++     
Sbjct: 130 MLGYLQFTSSVEANGDKWLYSATPYKMTTPSL-------------TVINQWQLAVRQGNT 176

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
            ++L+ +                 +   A+     +     WP +     L     S  V
Sbjct: 177 SHYLSTLAPQ---------HPYYTKMHDALKIM--LTDNRPWPVMTGSASLRPDQISDDV 225

Query: 112 QRLRERLIISGDLDPSKGLSVA 133
             LRE L  +G +  S   +  
Sbjct: 226 PALREILTRTGMMVASPEENKV 247


>gi|152995955|ref|YP_001340790.1| peptidoglycan-binding domain-containing protein [Marinomonas sp.
           MWYL1]
 gi|150836879|gb|ABR70855.1| Peptidoglycan-binding domain 1 protein [Marinomonas sp. MWYL1]
          Length = 556

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 103/422 (24%), Positives = 193/422 (45%), Gaps = 16/422 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK--ETIA 76
           +      L        ++D   N    +  N+  D         + + +P+++       
Sbjct: 140 LTSYAHDLSNGRYEPQLIDP--NWQLDAPNNNWKDLLYLNSATDMVNSLPLLAPRSPQYQ 197

Query: 77  QTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDL--DPSKGLSVA 133
             +K + +YQD+ ++     +    PL  G+    V +LR RL+  GD+     K     
Sbjct: 198 VLQKWLVYYQDLAAKEKDIFVSAGVPLSAGDEGPRVAQLRARLVQLGDIRFSTRKVNEEQ 257

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FD  ++ A+  FQ RH +   G   S T++ +NVP+  R +Q+  NL R +  L  ++  
Sbjct: 258 FDIRLKEALIRFQQRHHITADGAAGSKTIQMLNVPLKTRAKQIAYNLERWR-WLPSELEA 316

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             + V++   +++   NG++      ++G+ DR+TP+    +  ++ NP W +P  I ++
Sbjct: 317 NRIWVDLTNYTVDMYLNGELT-SMKAVIGKPDRKTPVFKGLMTYMVTNPTWRVPHRIARE 375

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPN--FIFRQDPGKINAM 308
           +++  L+ DP YL  +   +        KE+   +++W +       F F Q P + NA+
Sbjct: 376 NLLPKLQADPNYLVKHGYKVYSSWSIGAKELDSTKINWKAINEDKLAFRFEQKPDEGNAL 435

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F ++N  Y+HDTP   LF    R  +SGCVR+ N  +    + K +  ++   +
Sbjct: 436 GQFKFMFPNKNEIYLHDTPAKHLFREEDRAFSSGCVRLENPTEFAKEITKGSKQFND--M 493

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPI 428
              +KT   T + L T +PV+ VY +     + +++FR+DIY  D +    +      P 
Sbjct: 494 NNSLKTGSNTVITLPTYIPVYLVYFTVVPNANGMLEFRNDIYERDALMEEAMGYSAFGPR 553

Query: 429 DS 430
           DS
Sbjct: 554 DS 555


>gi|171056700|ref|YP_001789049.1| peptidoglycan-binding domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170774145|gb|ACB32284.1| Peptidoglycan-binding domain 1 protein [Leptothrix cholodnii SP-6]
          Length = 516

 Score =  394 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/375 (27%), Positives = 169/375 (45%), Gaps = 14/375 (3%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQ 112
            R+   +    P +      Q  +A+A Y+ +     W    P L  R L    +   + 
Sbjct: 141 QRLPQAVREAAPRL--PLYEQLRQALAQYRALGEHPAWAQKLPPLRGRKLEPLQAWDGLP 198

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            L  RL + GDL     + V  +  + +AV+ FQ RHGL   G+V  +TL A+ V    R
Sbjct: 199 LLAGRLQVLGDLPADVPVPVRHEGALVAAVQAFQRRHGLGDDGVVGRATLAALAVTPAQR 258

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE--NGK--VGLRSTVIVGRV-DRQ 227
            RQ+ + L R++     ++G R ++VN+P   L A E  + +  V L   VIVG+  D  
Sbjct: 259 ARQIALTLERLR-WTPLQLGPRMIVVNVPEFVLRAYETRDDRIDVRLEMKVIVGKALDTP 317

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK-EVFVEEV 286
           TP+    +  I F+PYW +PRSI   +++  L+ +P Y        +   G+      + 
Sbjct: 318 TPLFTEEMRFIEFSPYWNVPRSIAGAELVPRLQSEPAYFTRQGFEFVGRDGRVSAGFGDE 377

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
             ++        RQ PG  NA+   K  F + +  Y+H TP P LF    R  + GC+RV
Sbjct: 378 QLDAVLRGELRIRQRPGPNNALGDIKFVFPNNDAIYLHHTPSPGLFERDRRDFSHGCIRV 437

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
           +  + L  ++L+D P W    I E +   ++  ++L   VPV   Y +    +     F 
Sbjct: 438 QEPVALAKFVLQDQPGWDEARIVEAMARGQSRTLRLDRPVPVLIAYGTVLV-RQGRPHFL 496

Query: 407 DDIYGLDNVHVGIIP 421
            D+YG D +    + 
Sbjct: 497 ADVYGNDQLLDEALR 511


>gi|312971055|ref|ZP_07785234.1| cell wall degradation protein [Escherichia coli 1827-70]
 gi|310336816|gb|EFQ01983.1| cell wall degradation protein [Escherichia coli 1827-70]
 gi|323165398|gb|EFZ51185.1| cell wall degradation protein [Shigella sonnei 53G]
          Length = 317

 Score =  394 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 99/293 (33%), Positives = 151/293 (51%), Gaps = 7/293 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
            P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++
Sbjct: 10  KPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLR 69

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L  +      ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 70  LLPTEL--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 127

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--Q 300
            +P ++ +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q
Sbjct: 128 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 187

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 188 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 247

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 248 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 299


>gi|304415070|ref|ZP_07395810.1| peptidoglycan binding domain-containing hypothetical protein
           [Candidatus Regiella insecticola LSR1]
 gi|304283074|gb|EFL91497.1| peptidoglycan binding domain-containing hypothetical protein
           [Candidatus Regiella insecticola LSR1]
          Length = 421

 Score =  394 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 107/424 (25%), Positives = 180/424 (42%), Gaps = 33/424 (7%)

Query: 12  YCFFVYLILPMGLSLV--EKPIHASVLDE-IINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           Y  FV  +   G + +  + P    +     +N    ++       ++A +         
Sbjct: 4   YLHFVANVAAQGETWLYDDSPYKMGIPPTVFLNRWQQTLQQGNIAEYMASLTPQ------ 57

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISG----- 122
                      + +           WP+LP    L  G   V++  L + L  +      
Sbjct: 58  ---HPQYKNMRQVLKKLLS-EQHQPWPQLPNGSNLIPGKRDVNLPILHKILSHANTWLTA 113

Query: 123 -----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                DL P   +   ++  + +AVK FQ   GL P G++ + T + +N+    R   L 
Sbjct: 114 TTPVTDLPP-PSVDTLYNPALVAAVKRFQQAQGLTPDGIIGTGTRKWLNLSPQKRATLLA 172

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +N+ R++ L         ++VNI   SL   + G   L S VIVGR  R+TP + S ++ 
Sbjct: 173 LNMQRLRILPADM--KTGIMVNIADYSLHYYQEGNEILSSAVIVGRPSRKTPFMSSALSN 230

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPP 294
           ++ NP W +P S+++ D++  ++ D  YLK +   ++         +    ++W+     
Sbjct: 231 VVINPQWKVPTSMVKNDILPKVKYDATYLKQHGYTILTNWNNNAKIIDPSTINWHLISAN 290

Query: 295 NFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
           NF +  RQ PG  N++   K    S ++ Y+HDTP   LF       +SGCVRV     L
Sbjct: 291 NFPYRLRQAPGTNNSLGRYKFNMPSSDSIYLHDTPNHRLFQKETLALSSGCVRVHKAAIL 350

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLKD   W    +   +K   TT V +   +PV   Y+++W  K+  +QFR DIY  
Sbjct: 351 AKMLLKDA-GWDDTRLSNTLKQGNTTYVNIRQHLPVLLYYLTSWVDKEGKVQFRTDIYNY 409

Query: 413 DNVH 416
           D   
Sbjct: 410 DTAA 413


>gi|157369969|ref|YP_001477958.1| hypothetical protein Spro_1726 [Serratia proteamaculans 568]
 gi|157321733|gb|ABV40830.1| Peptidoglycan-binding domain 1 protein [Serratia proteamaculans
           568]
          Length = 613

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 96/310 (30%), Positives = 150/310 (48%), Gaps = 9/310 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
            P       +   +   VK FQ   GL   G++   T E +NV   +R   L +N+ R++
Sbjct: 305 SPVTVTDNRYTPDLVEGVKRFQKWQGLSADGVIGVRTREWLNVTPQIRASLLALNIQRLR 364

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L         ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W
Sbjct: 365 ILPGHV--DTGIMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPW 422

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--R 299
            +P +++++D++    +D  Y + +   ++     +   +    +DW+   P NF +  R
Sbjct: 423 NVPTTLVREDIVPKAMRDGSYFQKHGYTVLSGWSNDAEVINPAMIDWSMISPRNFPYRIR 482

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D
Sbjct: 483 QAPGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLLQD 542

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVG 418
              W+   +   +K   TT V +   +PV   Y++AW   D   QFR DIY  D+ V  G
Sbjct: 543 A-GWNNTRVSSTLKQGNTTFVNIRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDDTVRSG 601

Query: 419 IIPLPEDHPI 428
              L +   +
Sbjct: 602 AQILAQAEKL 611



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 35/147 (23%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N  LY    Y +                 + +IN+   ++   + 
Sbjct: 130 MLGYLQFVSSIGANGNNWLYSNIPYKLGL-------------PPNTVINQWQLALRQGKT 176

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG-GWPELPIRP-LHLGNSSVS 110
             ++  +                A+  +A+   +D+L+ G  WP++   P L     S  
Sbjct: 177 LAYVNTLAPQ---------HPQYAKMHQAL---RDMLADGRPWPQMANGPSLRPDQLSSD 224

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAY 137
           +  LRE L  +G L PS       D  
Sbjct: 225 IPALREILARNGMLTPSTAPVEVQDPP 251


>gi|304310214|ref|YP_003809812.1| hypothetical protein HDN1F_05650 [gamma proteobacterium HdN1]
 gi|301795947|emb|CBL44148.1| conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 560

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 103/360 (28%), Positives = 174/360 (48%), Gaps = 8/360 (2%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
               + A+A Y+++ +      LP   + L  G++   +  L + L   GD   +   + 
Sbjct: 197 YDHLKNALAHYRELAAHRKGISLPSLPKSLKPGDTWSGIPALADGLRYLGDFTGAPPKNN 256

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +   + + VK FQ  HGL   G++  ST  A++VP  +R+RQ+++++ R++ L EQ   
Sbjct: 257 RYTHDLVAGVKHFQGGHGLGVDGIIGQSTWSALSVPFSVRVRQIELSMERMRWLSEQMAD 316

Query: 193 LRYVLVNIPAASLEAVENGKVG--LRSTVIVGR-VDRQTPILHSRINRIMFNPYWVIPRS 249
            R ++VNIP   L A         L   V+VG+ V   TPIL + +  ++FNPYW +P S
Sbjct: 317 ERAIVVNIPQFQLWAFPGKTQASSLSMNVVVGKSVGNSTPILLNDVKSVVFNPYWNVPSS 376

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF--VEEVDWNSPEPPNFIFRQDPGKINA 307
           I +K+M+  LR++P+YL   N+ M+   G+ +          +     +  RQ PG  NA
Sbjct: 377 ITRKEMLPKLRENPEYLVSQNLEMV-GNGEVIATAPTPEQIEAISKGIYRLRQRPGPGNA 435

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K EF + +  YMHDTP    F+   R  + GC+R+ +   +  +LL   P W +  
Sbjct: 436 LGRVKFEFPNSDAIYMHDTPNRGAFSRSRRDFSHGCIRLSDPEKMADFLLTGQPGWDKKR 495

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
           + E +K+ +   V L   VPV   Y +A           +DIYG D+     +   ++  
Sbjct: 496 VSEAMKSDERRTVTLRNPVPVLIFYTTAMVDSTGRTVLLEDIYGYDSQLERALIASDERK 555


>gi|217970214|ref|YP_002355448.1| ErfK/YbiS/YcfS/YnhG family protein [Thauera sp. MZ1T]
 gi|217507541|gb|ACK54552.1| ErfK/YbiS/YcfS/YnhG family protein [Thauera sp. MZ1T]
          Length = 549

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 108/374 (28%), Positives = 176/374 (47%), Gaps = 6/374 (1%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRL 114
              +   +D+  P +           +   Q  L+ G WP++   P L  G SS  V  L
Sbjct: 178 APDLAAAVDAYAPDL--PLYRALRAELLAQQGRLAVGDWPKVAAGPTLKPGASSSRVASL 235

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           R RL  +G+          +D  +  AVK FQ  HGL   G++ + TLEA+N     R+ 
Sbjct: 236 RARLAAAGERVSEARDKSHYDEALVEAVKRFQAAHGLQADGVLGAQTLEALNASPAQRVA 295

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           Q++ NL R++ +     G R +LV+I     + V +G+    S VIVG+  R+TP L   
Sbjct: 296 QIRANLERLRWVASDLQGDR-LLVDIVGYHADLVLDGQPVWSSRVIVGKPKRRTPSLLDS 354

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           +  ++ NP WV+P +I+++D++    ++P YL +  + ++D  G+ V    +DW+     
Sbjct: 355 VTHLVLNPKWVVPPTILREDVIPGAARNPSYLANRRLRVVDRSGQTVDPATIDWSGARQS 414

Query: 295 NFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            F +R  Q  G   ++   K    +    Y+HDT    LF    R  +SGCVRV    +L
Sbjct: 415 GFPYRVEQQSGADGSLGRIKFSLSNPYVIYLHDTNARSLFKRAERALSSGCVRVEKPEEL 474

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
            V LL D+  WS   ++  + + +T  V +  +V V   Y +A   +   +  R+DIYG 
Sbjct: 475 AVLLLADSGRWSAQALQAALDSGRTRTVDVGRDVKVLLHYATAALDEAGRVLLRNDIYGY 534

Query: 413 DNVHVGIIPLPEDH 426
           D   V  +  P   
Sbjct: 535 DAAIVAALDAPAPA 548


>gi|319955785|ref|YP_004167048.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
           16511]
 gi|319418189|gb|ADV45299.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
           16511]
          Length = 575

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 177/352 (50%), Gaps = 10/352 (2%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKG-LSV 132
            A+ +KA+  Y +I  RGGW  LP  + +  G S  ++  +R+ L I GDL  S    S 
Sbjct: 198 YAKLKKALERYLEIADRGGWKPLPAFKAIKPGQSHPAIPLIRQHLRIEGDLPASASLDSD 257

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +D  ++ A++ +++RHGL  + ++D+ T   +N  V  +I  L++NL RIK +  Q+  
Sbjct: 258 IYDETLQKAMRRYKLRHGLPGTPVIDAQTRRWLNTSVQYKIAMLRLNLDRIKWIWRQEAP 317

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +R + +NIPA  L   E   +     V+ G+ D  TP+ H+ +  I+ NPYW IP SI++
Sbjct: 318 VR-IELNIPAFRLYVYEGQHLVDTMRVVTGKPDHPTPVFHNTMKYIVVNPYWKIPESIVR 376

Query: 253 KDMMALLRQDPQYLKDNNIHM---IDEKGKEVFVEEVDWNSPEPPN----FIFRQDPGKI 305
            +M+  L +DP Y +     +    DE    +    ++W+     N    + F Q PG  
Sbjct: 377 SEMLKHLVKDPYYYERRGKVLHAGWDEDSPRIDPGTINWSQYVGNNKTIPYRFMQVPGTR 436

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NA+   K  F ++ + Y+HDTP   LF    R  + GC+R++   +L   L         
Sbjct: 437 NALGKIKFLFPNKYSVYIHDTPSKKLFFRSTRAFSHGCMRIQKPRELLKVLALYNSNIDV 496

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
             I E + TR+   + L  E+PV  VY++A+      + FR DIY  D   +
Sbjct: 497 EGIMEQLGTREKETISLLHEIPVDIVYLTAFVDDYGNLNFRKDIYHYDKYQM 548


>gi|91227204|ref|ZP_01261663.1| putative amidase [Vibrio alginolyticus 12G01]
 gi|91188732|gb|EAS75020.1| putative amidase [Vibrio alginolyticus 12G01]
          Length = 513

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 184/418 (44%), Gaps = 39/418 (9%)

Query: 6   KINKILYCFFVYLILPM----GLSLVEKPIHASVLDEIINESYHSIV-NDRFDNFLARVD 60
           +    L+    ++ LP      LS++   I    L + +      +  +D F +  + + 
Sbjct: 122 EGINWLFTDKAHVTLPAPSIDTLSVLSNEITVGKLGQFLASLRSPLQTDDAFYSAYSSLS 181

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                  P       A  +  +A   DIL          RPL           L ER+ I
Sbjct: 182 EHSQYQYP-------AYQQTGLARVGDILEN--------RPL-----------LIERMEI 215

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            G D+     ++  +D  +E A+K FQ  HGL   G++  +T+  +N     R+  L +N
Sbjct: 216 VGVDVSYLDLVTEEYDEQLELAIKEFQRIHGLKEDGVIGPNTIRWINFSPQERLHLLALN 275

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +   +++     V VN+P   +    +G+    S V+VGR  R+TPI+   ++ ++
Sbjct: 276 SERSRIWSKER--DNVVFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMSVALDSVI 333

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEPPNFI 297
            NP W +P +I+ KD++  ++++P YL ++NI +I      + +    ++W +  P  F 
Sbjct: 334 LNPTWNVPWTIMVKDIIPKVKRNPMYLINHNIQIIRSWTSNEIIDPTTINWATVNPRTFP 393

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q  G  NA+   K    +    Y+HDTP   LF    R  +SGCVRV +   L   
Sbjct: 394 YRMRQASGLQNALGLYKFNMPNPQAIYLHDTPSKNLFEQDRRAFSSGCVRVEHADQLAEL 453

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L K      R   +     R  T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 454 LFKTQGLEERLAKKRESSRRSNTSVPLGERIQVHIIYQTAWL-EEGTLYYRDDIYKYD 510


>gi|113866566|ref|YP_725055.1| hypothetical protein H16_A0537 [Ralstonia eutropha H16]
 gi|113525342|emb|CAJ91687.1| Uncharacterized protein conserved in bacteria [Ralstonia eutropha
           H16]
          Length = 530

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 116/389 (29%), Positives = 182/389 (46%), Gaps = 18/389 (4%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW----PELPIRPLHLGNSSVSV 111
             R+   I    P           +A+A Y++I  +  W    P LP   L  G      
Sbjct: 140 QQRLPDAIRQAAPTF--PLYGTLREALARYREIAKQPAWGQPLPPLPASKLTPGQPWAGA 197

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             L  RL+  GDL     +   ++  +   VK FQ RHGL+  G++ ++TL  +N+P+  
Sbjct: 198 AALAARLVALGDLPAGTQVPARYEGTLVDGVKAFQSRHGLEADGVIGAATLAQLNLPIAS 257

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE--NGK--VGLRSTVIVGRV-DR 226
           R+RQ+++ + R++       G R ++VN+P   L A E  +GK  + L   VIVG+  D 
Sbjct: 258 RVRQIELTMERLRWTP--LDGPRMIVVNVPEFMLRAYEIRDGKLDIKLEMKVIVGKALDT 315

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEE 285
           +TP+    +  I F+PYW IP SI +++ +  LR+DP Y     +  +   GK V  + E
Sbjct: 316 RTPLFEEDMRYIEFSPYWNIPPSIARRETVPHLRRDPAYFNRQGLEFVTGDGKAVTTLSE 375

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
            +  +        RQ PG +NA+   K  F +  N Y+H TP P LF    R  + GC+R
Sbjct: 376 ENLEAVLNGRMRIRQRPGPLNALGDIKFVFPNNENIYLHHTPSPQLFKRGRRDFSHGCIR 435

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V   + L  ++L D P W+   I E +   K+  V+L   +PV   Y +  +  D  + F
Sbjct: 436 VEAPVALAQFVLHDMPDWNETRIREAMTRGKSNTVRLQQPLPVVLAYGTVIARADGRVSF 495

Query: 406 RDDIYGLDNVHVGIIP----LPEDHPIDS 430
             DIYG D +    +      P+   I S
Sbjct: 496 LPDIYGHDKLLEKALRQRNGRPQQPAIAS 524


>gi|83593271|ref|YP_427023.1| ErfK/YbiS/YcfS/YnhG [Rhodospirillum rubrum ATCC 11170]
 gi|83576185|gb|ABC22736.1| ErfK/YbiS/YcfS/YnhG [Rhodospirillum rubrum ATCC 11170]
          Length = 599

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 108/395 (27%), Positives = 167/395 (42%), Gaps = 15/395 (3%)

Query: 49  NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE--LPIRPLHLGN 106
            D   N  A  D G+                + +  YQ +   GGWP        +  G+
Sbjct: 202 EDLLANAGAAPDFGLFLATLAPPTPQYDLLRQGLVRYQALARDGGWPTDLADGASIKPGD 261

Query: 107 SSVSVQRLRERLIISGDLDPSKG------LSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
               +  +R RL   G +  S         +   D ++  AV++FQ  HGL   G++   
Sbjct: 262 RDPRLPEMRRRLAAEGLVVGSDPTFIGPPDAELLDDFLVEAVRIFQAAHGLSADGVIGRG 321

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           TL  MN     RI Q++V L R + LL + +G  ++LVN+P   L   E     L   V 
Sbjct: 322 TLVDMNTTPAQRITQIRVALERWR-LLPRALGQTHLLVNVPQYQLYLNEGRTTVLSMRVA 380

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM----IDE 276
           VGR D +TP+    +  + FNPYW +P SI Q +++    ++  YL      +    ++ 
Sbjct: 381 VGRQDFETPLFSDTLRYMEFNPYWNVPISIAQAEVIPKQIENSAYLAKKGFTVLPRGVEG 440

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
               V  E VDW +    ++  RQDPG  N + + K  F +    Y+HDT    +F+   
Sbjct: 441 WDDGVGHESVDWKADAARSYRLRQDPGPANPLGTVKFMFPNEYAVYLHDTNSRGVFDRSA 500

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  + GCVRV+    L  ++L +  T                 V+L   +P+H VYI+AW
Sbjct: 501 RAVSHGCVRVQEPALLANYIL-ERFTDRIGKTAADFSGPTPKVVRLNRPLPIHLVYITAW 559

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPIDSD 431
             +   + F  DIY  D      +      P D+D
Sbjct: 560 GGEGGKVAFVRDIYAKDRAIRQALHDTAASP-DAD 593


>gi|327393347|dbj|BAK10769.1| cell wall degradation amidase protein YcbB [Pantoea ananatis
           AJ13355]
          Length = 610

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             + G    ++  + +AVK FQ   GLD  G +   T E +NV    R   L +N+ R++
Sbjct: 302 PAAPGSVNVYNDELVAAVKRFQQWQGLDADGAIGLRTREWLNVSPQQRAALLALNIQRLR 361

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            LL   M    ++VNIP  SL    NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 362 -LLPDDMH-NGIMVNIPNYSLNYYNNGTKVLSSRVIVGRPDRKTPLMRSALNNVVLNPPW 419

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--R 299
            +P +++++D++  ++QDP YL  +   ++     +   +    +DW+     +F +  R
Sbjct: 420 NVPTNLVRQDIIPKVKQDPTYLYKHGYTLLSGWSADSEVIDPSMIDWSMVSASSFPYRIR 479

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG+ N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D
Sbjct: 480 QAPGQTNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGILLQD 539

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
              W+   I + +K   T  V +   +PV+  Y++AW   D   QFR DIY  DN     
Sbjct: 540 -VGWNDARISDTLKQGDTRYVPIRHRIPVNLYYLTAWVADDGKTQFRTDIYNYDNTARSA 598



 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 47/150 (31%), Gaps = 33/150 (22%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+            LY    Y +    +S             +IN   +++     
Sbjct: 139 MLGYLQFVSSVPAQGETWLYSTTPYKLAVPSVS-------------VINAWQNAVNAGSS 185

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+  +         +          KA+     +  +  WP++  R  L  G  S  V
Sbjct: 186 AAFVNSL---------VPQHPQYPLMHKALKSL--LEDKQPWPQIKNRDTLRPGQVSDDV 234

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             LRE L  SG L          +  V +A
Sbjct: 235 PALREILRRSGMLSAQVTAPAPNEDAVPTA 264


>gi|291616920|ref|YP_003519662.1| YcbB [Pantoea ananatis LMG 20103]
 gi|291151950|gb|ADD76534.1| YcbB [Pantoea ananatis LMG 20103]
          Length = 620

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             + G    ++  + +AVK FQ   GLD  G +   T E +NV    R   L +N+ R++
Sbjct: 312 PAAPGSVNVYNDELVAAVKRFQQWQGLDADGAIGLRTREWLNVSPQQRAALLALNIQRLR 371

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            LL   M    ++VNIP  SL    NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 372 -LLPDDMH-NGIMVNIPNYSLNYYNNGTKVLSSRVIVGRPDRKTPLMRSALNNVVLNPPW 429

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--R 299
            +P +++++D++  ++QDP YL  +   ++     +   +    +DW+     +F +  R
Sbjct: 430 NVPTNLVRQDIIPKVKQDPTYLYKHGYTLLSGWSADSEVIDPSMIDWSMVSASSFPYRIR 489

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG+ N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D
Sbjct: 490 QAPGQTNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGILLQD 549

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
              W+   I + +K   T  V +   +PV+  Y++AW   D   QFR DIY  DN     
Sbjct: 550 -VGWNDARISDTLKQGDTRYVPIRHRIPVNLYYLTAWVADDGKTQFRTDIYNYDNTARSA 608



 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 48/151 (31%), Gaps = 33/151 (21%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+            LY    Y +    +S             +IN   +++     
Sbjct: 149 MLGYLQFVSSVPAQGEIWLYSTTPYKLAVPSVS-------------VINAWQNAVNAGSS 195

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+  +         +          KA+     +  +  WP++  R  L  G  S  V
Sbjct: 196 AAFVNSL---------VPQHPQYPLMHKALKSL--LEDKQPWPQIKNRDTLRPGQVSDDV 244

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             LRE L  SG L          +  V +A+
Sbjct: 245 PALREILRRSGMLSAQVTAPAPNEDVVPTAL 275


>gi|56477065|ref|YP_158654.1| hypothetical protein ebA2890 [Aromatoleum aromaticum EbN1]
 gi|56313108|emb|CAI07753.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 543

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 182/406 (44%), Gaps = 25/406 (6%)

Query: 40  INESYHSIVNDRFDN--------FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
           ++ ++ +   D FD            R+   +    P++     A   +A+  Y+ +   
Sbjct: 123 VHANFVAPAADGFDPVTYLYAAVLERRLPDAVRRVAPVL--PLYANVREALRRYRILARD 180

Query: 92  GG----W----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
                 W    P  P R L  G +   +  L +RL+  GDL  +  + + ++  +   VK
Sbjct: 181 PSGIAPWLAALPRPPQRKLEPGQAYAGMPVLMQRLVALGDLPAATPVPLRYEGALVEGVK 240

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            FQ RHGL   G+V  +TLE ++V    R+RQ+++ L R++       G R ++VN+P  
Sbjct: 241 AFQRRHGLAEDGVVGKATLEQLDVSPVARVRQIELTLERLR-WTPLLQGPRMIVVNVPEF 299

Query: 204 SLEAVE--NGKV--GLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
            L A E  +G+V       VIVG   D +TP+    +  I F+PYW +P SI + + +  
Sbjct: 300 VLRAYEARDGRVEVKTAMKVIVGSALDTRTPLFDEDMRFIEFSPYWNVPPSIARAETIPK 359

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFV-EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
           LR+D  YL+      +   G+ +        ++        RQ PG  NA+   K  F +
Sbjct: 360 LRRDAAYLRQQGFEFVTGNGQVIPTFAPEYLDAVLRGEMRIRQRPGPSNALGDIKFIFPN 419

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
            +N ++H T  P LF    R  + GC+RV   + L  ++L+D P WS   I   +    +
Sbjct: 420 NDNIFLHHTSTPRLFGKDRRDFSHGCIRVEEPVVLAKFVLQDDPEWSEERIRAAMAGGVS 479

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
             ++L   +PV   Y +     D ++ F  DIYG D +    +  P
Sbjct: 480 KTLRLREPLPVVIAYSTVLVKSDGMVYFFRDIYGHDTLLDAALRQP 525


>gi|188534256|ref|YP_001908053.1| hypothetical protein ETA_21290 [Erwinia tasmaniensis Et1/99]
 gi|188029298|emb|CAO97175.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
          Length = 612

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 100/290 (34%), Positives = 149/290 (51%), Gaps = 8/290 (2%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
             +  +   +  A+K FQ   GL+  G +   T E +NV    R   L +N+ R++ LL 
Sbjct: 308 NAANTYTPQLVEALKRFQRWQGLEADGAIGQRTREWLNVSPQQRATLLALNIQRLR-LLP 366

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
             M    ++VNIP  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W +P 
Sbjct: 367 DDMH-NGIMVNIPNYSLAYYVNGREILASRVIVGRPDRKTPLMRSALNNVVLNPPWNVPT 425

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQDPG 303
           ++I+KD++  ++QDP YL  +   ++     E   V    +DW+     +F +  RQ PG
Sbjct: 426 TLIRKDIVPKVKQDPAYLYKHGYTLLSGWSSEAQVVDPSMIDWSMVSAASFPYRIRQAPG 485

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W
Sbjct: 486 PTNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLLRD-VGW 544

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           +   I   +K   T  V +   +PV+  Y++AW   D   QFR DIY  D
Sbjct: 545 NDTRISSTLKEGDTRFVSIRHRIPVNLYYLTAWVADDGQPQFRTDIYNYD 594


>gi|320540487|ref|ZP_08040137.1| putative murein L,D-transpeptidase [Serratia symbiotica str.
           Tucson]
 gi|320029418|gb|EFW11447.1| putative murein L,D-transpeptidase [Serratia symbiotica str.
           Tucson]
          Length = 541

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 121/498 (24%), Positives = 204/498 (40%), Gaps = 97/498 (19%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+         N  LY    Y +                 + +IN+   ++  DR 
Sbjct: 70  MLGYLQFVSAIGTHGNSWLYSNIPYKLGL-------------PPNAVINQWQLAVRQDRL 116

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
            +++  +             +        +      ++   WP++   P L+ G  S  +
Sbjct: 117 QSYVNSLVPQHPQYT-----KMYQALRDML------VNNRPWPQVSNGPNLYPGQLSNDI 165

Query: 112 QRLRE-------------------RLIISG-----------------------DLDPSKG 129
             LRE                   RL  +                        D+  + G
Sbjct: 166 PALREILMRIDMLTHSAPVAQARGRLARNEPDDGGLSVGEENNRESLVATSARDITLAAG 225

Query: 130 LS-------------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
            +               +   + + VK FQ   GL+  G++ + T E +NV    R+  L
Sbjct: 226 STVITQSAASVTVGETVYSPDLVAGVKRFQKWQGLNTDGVIGARTREWLNVSPQTRVALL 285

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
            +N+ R++ L         ++VNIP  S+   +NG+  L S VIVGR  R+TP+++S ++
Sbjct: 286 ALNIQRLRILPGYI--SSGIMVNIPNYSMTYYQNGREVLSSHVIVGRPSRKTPLMNSGLS 343

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEP 293
            ++ NP W +P S+++ D++    +D  Y + +   ++ +  K+   +    +DWNS   
Sbjct: 344 NVVLNPPWNVPTSLVRADIVPKAMRDGSYFQQHGYTLLSDWSKDAKVIDPAMIDWNSVSA 403

Query: 294 PNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
            NF +  RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    D
Sbjct: 404 RNFPYRVRQAPGASNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDMRALSSGCVRVNKADD 463

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL D   WS   +   ++   TT V +   +PV   Y++AW   D  +QFR DIY 
Sbjct: 464 LANMLLHDA-GWSNDRVASTLQEGNTTYVNIRQRIPVKLYYLTAWVSDDGQMQFRTDIYN 522

Query: 412 LD-NVHVGIIPLPEDHPI 428
            D  V  G+  L +   +
Sbjct: 523 YDHAVRSGVQILAQAEKL 540


>gi|310767192|gb|ADP12142.1| hypothetical protein EJP617_24610 [Erwinia sp. Ejp617]
          Length = 615

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 124/477 (25%), Positives = 207/477 (43%), Gaps = 68/477 (14%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEK---PIHASVLDEII-----NESY 44
           M+GYL        K    LY    Y +    ++++ +    + +  L+  +         
Sbjct: 131 MLGYLQFTSSAPSKGEAWLYSTVPYRLEAPSMTVINQWQQALASGNLNGFVRSLAPQHPQ 190

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIA--QTEKAIAFYQDILSRGGWPELPIRPL 102
           ++ ++    + LA           I+ K+T+   Q    ++  +DIL R G       P+
Sbjct: 191 YARMHQALKSLLADTRPWPR----IVDKQTLRPGQISNDVSALRDILQRNGMMSSANEPV 246

Query: 103 HL-----GNSSVSV----------QRLRERL----------IISGDLDPSKGLSVAFD-- 135
                  G     +            L+ R            +SGD+  S      F+  
Sbjct: 247 KPAAEVVGAVDAPLVHDDDNAQPDANLQTRADNNRVVSPSANLSGDVTDSAAAPNVFNGQ 306

Query: 136 -----------AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
                        +  A+K FQ   GL+  G + + T E +NV    R   L +N+ R++
Sbjct: 307 AALGSQANTYSPQLVEALKRFQRWQGLEADGAIGTRTREWLNVSPQQRATLLALNIQRLR 366

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L +       ++VNIP  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 367 LLPDDM--QNGIMVNIPNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLNPPW 424

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--R 299
            +P ++++KD++  +++DP YL  +   ++     E   V    ++W++    +F +  R
Sbjct: 425 NVPTTLVRKDIVPKVKRDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSTVSAASFPYRIR 484

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D
Sbjct: 485 QAPGATNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLLRD 544

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
              W+   I   +K   T  V +   +PV+  Y++AW  +D   Q+R DIY  DN  
Sbjct: 545 -VGWNDARISGTLKEGNTRFVPIRQRIPVNLYYLTAWVAEDGQPQYRTDIYNYDNTA 600


>gi|254472994|ref|ZP_05086392.1| peptidoglycan-binding domain 1 [Pseudovibrio sp. JE062]
 gi|211957715|gb|EEA92917.1| peptidoglycan-binding domain 1 [Pseudovibrio sp. JE062]
          Length = 550

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 108/416 (25%), Positives = 182/416 (43%), Gaps = 15/416 (3%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMGIDSDIPIISKE 73
             + IL          +    + E I          +   +                   
Sbjct: 142 LTHSILKYAEDAQAGRVSPYAISEDITLRPERPDPIEALTSVARSAAPAQVLAAFNPPHA 201

Query: 74  TIAQTEKAIAFYQDILSRGGWPE---LPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKG 129
                +K +A  ++    G   +   +P   L  +G+ S  V  LRERL +       + 
Sbjct: 202 EYKALKKQLAELREQTHNGDLEKQVVIPAGKLLKVGSKSSRVALLRERLSV----PTVES 257

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD-LRIRQLQVNLMRIKKLLE 188
               +   +  AV+ FQ  +GL P G V   TL A+N  V    I+ +  N+ R +  + 
Sbjct: 258 QMNVYTQDLAYAVEAFQAANGLHPDGAVGPRTLLALNGRVSGDPIKDVIANMERWR-WMP 316

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           + +G  ++ VNIP   +     G V   + V+VG+   +TP+   ++  ++ NPYW +P 
Sbjct: 317 RDLGETHLRVNIPEFMVRLNMEGFVLYETRVVVGKRSNKTPVFSDKMQHVVVNPYWNVPY 376

Query: 249 SIIQKDMMALLRQ-DP-QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           SI  K+++  LR  +P  YL+  N  ++   GK V    V+W++        RQ PG+ N
Sbjct: 377 SIASKELLPELRASNPQSYLQKGNYEIVYG-GKIVDPRRVNWDAVTFKQIRIRQRPGRGN 435

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+   K  F +++N Y+HDTP   LFN   R  + GCVRV+N  +    L+    T +  
Sbjct: 436 ALGKIKFMFPNKHNVYLHDTPSKSLFNRSERAFSHGCVRVQNPFEFSDALMATQDTITGN 495

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +I  +V  ++T  V L  ++PVH  Y +A+  +   +Q R DIYG +   +  + L
Sbjct: 496 YIRSLVGKKQTQ-VNLQKDIPVHISYFTAFVDEAGKLQRRPDIYGHNQAVIDALNL 550


>gi|300716096|ref|YP_003740899.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299061932|emb|CAX59048.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 616

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 100/292 (34%), Positives = 151/292 (51%), Gaps = 8/292 (2%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
               +  + A +  AVK FQ   GL+P G +   T E +NV   LR   L +N+ R++ L
Sbjct: 310 PADPTHIYSAELVEAVKRFQRWQGLEPDGAIGPRTREWLNVSPQLRASLLALNIQRLR-L 368

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           L   M    ++VNIP  SL    NG   L S VIVGR DR+TP++ S +N ++ NP W +
Sbjct: 369 LPDDMH-NGIMVNIPNYSLIYYLNGSQILASRVIVGRPDRKTPLMRSALNNVVLNPPWNV 427

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQD 301
           P +++++D++  ++QDP YL  +N  ++     +   +    +DW      +F +  RQ 
Sbjct: 428 PTTLVRQDIVPKVKQDPAYLYKHNYTLLSGWSNDAEVIDPSMIDWRMVSAASFPYRIRQA 487

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D  
Sbjct: 488 PGATNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANLLLQDA- 546

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            W+   I   +K   T  V +   +PV+  Y++AW   D   Q+R DIY  D
Sbjct: 547 GWNDTRISSTLKEGDTRYVPIRHRIPVNLYYLTAWVADDGKAQYRTDIYNYD 598



 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 45/147 (30%), Gaps = 33/147 (22%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K    LY    Y +    LS             +IN+   ++ +   
Sbjct: 130 MLGYLQFVSTVPAKGETWLYSNVPYKLEVPTLS-------------VINQWQRAVEHGGT 176

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
           + F+  +                    +A+     +     WP+L  +  L  G  S  V
Sbjct: 177 NAFVTSLAPQ---------HPQYVLMHQALKTL--LADNHPWPQLAAKQTLKPGQLSDDV 225

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYV 138
             LR  L  +G +  S       D  V
Sbjct: 226 PALRAILARTGMMTASAEGPKPTDEPV 252


>gi|269102898|ref|ZP_06155595.1| L,D-transpeptidase YcbB [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162796|gb|EEZ41292.1| L,D-transpeptidase YcbB [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 582

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 111/361 (30%), Positives = 173/361 (47%), Gaps = 15/361 (4%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            E      KA+     + S   WP       + LGN   + + L   L + GDL   +  
Sbjct: 216 NEQYTSNIKALEKLTQL-SHKRWPIFHVANKVSLGNPLPNAKNLITILEMLGDLPSYQAE 274

Query: 131 S------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
                        +  AVK FQ RHGL P G++  +TL  ++     R+R + +N +R+ 
Sbjct: 275 QMLTENLDYLSPTLIEAVKSFQQRHGLSPDGVIGPNTLYWLSKSPQERLRVVALNTLRLS 334

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
              +++     ++VNIPA  L A  N +  + S VIVGR  R TP++ S I  ++FNPYW
Sbjct: 335 LWPDEQ--PNQIVVNIPAYELTARLNNQSVMTSKVIVGRPSRNTPMMDSTITSVVFNPYW 392

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEPPNFIF--RQ 300
            +P SI++KD++  ++++P YL  N   ++        + V  ++W    P  F +  RQ
Sbjct: 393 NVPTSIMRKDILPKVKRNPSYLTRNRYEILSSWSNPARISVNAINWRGVNPKTFPYRLRQ 452

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  NA+   K    +    Y+HDT    LFN   R  +SGCVRV     L   LL+ +
Sbjct: 453 KPGNKNALGRFKFNIPNDYAIYLHDTSSKRLFNKSDRALSSGCVRVEYAKGLAQLLLEYS 512

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
               +  I+   +TR T  V L  ++PVH +Y +AW+  + +I +RDDIY  D +     
Sbjct: 513 GVSDKRFIQYSSRTR-TKTVVLKNKIPVHLIYQTAWAEGNGLIYYRDDIYHYDKMGGASQ 571

Query: 421 P 421
            
Sbjct: 572 N 572


>gi|149278087|ref|ZP_01884226.1| cell wall degradation protein [Pedobacter sp. BAL39]
 gi|149231285|gb|EDM36665.1| cell wall degradation protein [Pedobacter sp. BAL39]
          Length = 532

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 100/372 (26%), Positives = 188/372 (50%), Gaps = 22/372 (5%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH---LGNSS 108
            D+ ++      +   P+         +K +  Y  +   G + ++    L    +G+S+
Sbjct: 176 LDSLMSGKKTAAEDWEPV--NREYKWMKKRLTSYYQLQQEGKFEDISSGKLKVYRIGDSA 233

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           ++V+++R RLI  GD    K  S  FD+ + ++VK  Q ++G+  +G ++ + ++A+NVP
Sbjct: 234 LTVRQVRLRLIQFGD-STLKDSSSVFDSTLRASVKRAQGQYGMGQNGNINKALIKALNVP 292

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           ++ RI+Q+ +N+ R++  + Q    RY+L NIP   L   E+ K  L   ++VG+   +T
Sbjct: 293 LEQRIKQILINMERMR-WMPQMPDGRYLLANIPEYRLHVFEDHKTVLNMGIVVGKAANKT 351

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
            I  +++  I+F+PYW IP SI++ +++  ++++  YL   N+             +  +
Sbjct: 352 VIFSNKMRNIVFSPYWNIPASIVRAEVLPAMKRNRNYLASKNME------------QTGF 399

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           ++  P     RQ PG  N++   K  F +  + Y HDTP   LF    R  + GC+R+  
Sbjct: 400 SNGLPE---VRQKPGDNNSLGRVKFLFPNSYDIYFHDTPAKSLFAQEKRAFSHGCIRLSQ 456

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
              L  +LL     W++  I + +  +K   V L++ VPV   Y + W  +D ++ FRDD
Sbjct: 457 PAALAEYLLDGKSGWTKEKIAKAMSGKKEVWVALSSPVPVFITYFTCWVDEDGLLNFRDD 516

Query: 409 IYGLDNVHVGII 420
           +YG D      +
Sbjct: 517 VYGHDRKMAEQL 528


>gi|126174124|ref|YP_001050273.1| peptidoglycan binding domain-containing protein [Shewanella baltica
           OS155]
 gi|125997329|gb|ABN61404.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS155]
          Length = 521

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 109/355 (30%), Positives = 174/355 (49%), Gaps = 12/355 (3%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
             +  K +A    + +   W  L +   L +G S   V  + +RL + GDL      ++ 
Sbjct: 166 YQRVLKQVAHLVQLDATEPWETLVLDEKLTVGMSHPFVDTIAKRLWLLGDLAIEPTTNLV 225

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   +   VK FQ RHGL   G++   TL  +N     R   L  N +R +   E+K+  
Sbjct: 226 YSEELVVGVKRFQQRHGLKQDGVIGKQTLYWLNQSPKARAVLLAKNTIRQRVF-ERKLEP 284

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            Y+L+N+PA  +  V+NG   L S VIVG+  RQTP+L S+I+ ++ NP W +P SI+++
Sbjct: 285 SYLLINVPAFEMILVDNGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVPSSILRR 344

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           D++  +R++  YL +    + D  G+ V     +W      +F +   Q PG  NA+   
Sbjct: 345 DILPQIRRNGHYLNERQFDVYDYNGQLVQHMPEEWQDLASTSFPYQLVQRPGAKNALGKY 404

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYH 367
           K  F +  + Y+H T EP LFN   R  +SGC+R+  + +L  W    L+KD   W +  
Sbjct: 405 KFHFDNSFSVYLHGTSEPSLFNKDDRALSSGCIRIEKVTELAQWFKEHLVKDKRLWDKL- 463

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              V    +     L+ ++PVH VY +AW       Q+R DIY L+      +P 
Sbjct: 464 ---VPDVTEPQWFSLSQKLPVHLVYWTAWLDDSGQEQYRSDIYHLEAELTNAVPA 515


>gi|127512756|ref|YP_001093953.1| peptidoglycan binding domain-containing protein [Shewanella loihica
           PV-4]
 gi|126638051|gb|ABO23694.1| Peptidoglycan-binding domain 1 protein [Shewanella loihica PV-4]
          Length = 458

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 106/372 (28%), Positives = 174/372 (46%), Gaps = 6/372 (1%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRP 101
               I    F +        + +  P ++          + +   +     W P  P   
Sbjct: 77  QRQGIATGEFPSAPDDPYTSVIASEPQVAD--YLMLSNRVRYLLWLARHESWLPLEPQGW 134

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+S   +  +R RL   GD        + FD  +++A+  FQ RHGL P  ++  +T
Sbjct: 135 LKPGDSHRIIPEIRVRLQALGDYPQGDTSGLYFDETLKAAMIKFQTRHGLKPDAIIGPAT 194

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           L  +N     R + L VN +R  + L   +G RY+L+NIPA  +  V++ +V LRS VIV
Sbjct: 195 LSWLNRTPRERAQLLAVNFIRRAEYLA-DIGERYLLINIPAYEMWLVDDNQVALRSKVIV 253

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G+  RQTPI+   I  ++ NP W +PR ++  D++  +R+D  Y+   N  + D +G+ V
Sbjct: 254 GKPYRQTPIISGEIKNLVLNPSWRVPRRLLTHDLLPKVREDGSYISSRNFEVFDYQGERV 313

Query: 282 FVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
              + +W       F +R  Q PG  N +   K  F +  + Y+HDT +  LF    R  
Sbjct: 314 IKSDDEWRDIAKGKFPYRLVQKPGVGNTLGRYKFFFPNEYSVYLHDTSDKALFQRSDRAL 373

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGC+R+  +  L  W+        +  +   ++  KT        +P+H VY ++W   
Sbjct: 374 SSGCIRIEKVEQLANWMASHLVRDKQTWVRMQIERDKTQWFAFDAGLPIHLVYWTSWLDD 433

Query: 400 DSIIQFRDDIYG 411
           D++ QFRDDIY 
Sbjct: 434 DNVAQFRDDIYK 445


>gi|226946156|ref|YP_002801229.1| petidoglycan binding protein [Azotobacter vinelandii DJ]
 gi|226721083|gb|ACO80254.1| petidoglycan binding protein [Azotobacter vinelandii DJ]
          Length = 530

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 106/353 (30%), Positives = 165/353 (46%), Gaps = 7/353 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKG-- 129
           E       A A  +    R  W  +P   L   G +   V  L +RL   G L       
Sbjct: 180 EPYRALRHAYAELRRNAPR-AWRLVPDGSLLRPGMTDERVPLLEQRLAAEGYLSERASGR 238

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +   +  A+K FQ +H LD  G+V  +TL  +NV    R+ Q++VNL R +  L +
Sbjct: 239 DRQRYTPQLVEAMKRFQAKHFLDDDGVVGPATLTELNVTPAERLAQVRVNLERFR-WLAR 297

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
           +M    +LV++  A L    + +   ++   VGR  R TP+L S++  +  NP W +P +
Sbjct: 298 EMEPTLLLVDVAGAQLTFFHDHQPRWQTRTQVGRPTRPTPLLKSQVTHLTLNPTWTVPPT 357

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I+++D +  +R++  +L   N+ +ID +GKE+    VDW++P     + RQDPG  N + 
Sbjct: 358 ILREDKLPRIRRNIGFLASQNLRVIDRQGKELNPRNVDWHNPSG--IMLRQDPGPHNPLG 415

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              I F +    Y+HDTP   LF    R  +SGCVRV   + L   LL+      R   E
Sbjct: 416 RIAIRFPNPFAVYLHDTPSQHLFAKETRTLSSGCVRVERAMQLTDLLLEGASPAERQRFE 475

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           E++ + KT  + L   VP+   Y +        + FR DIY  D   V  +  
Sbjct: 476 EILASGKTRNLNLPRPVPILLAYWTVQVDDGGQLVFRPDIYAHDGKLVAALNA 528


>gi|259908907|ref|YP_002649263.1| hypothetical protein EpC_22600 [Erwinia pyrifoliae Ep1/96]
 gi|224964529|emb|CAX56039.1| Peptidoglycan-binding domain 1 protein [Erwinia pyrifoliae Ep1/96]
 gi|283478902|emb|CAY74818.1| Uncharacterized protein ycbB [Erwinia pyrifoliae DSM 12163]
          Length = 615

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 124/477 (25%), Positives = 205/477 (42%), Gaps = 68/477 (14%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEK---PIHASVLDEII-----NESY 44
           M+GYL        K    LY    Y +    ++++ +    + +  L+  +         
Sbjct: 131 MLGYLQFTSSAPSKGEAWLYSTVPYRLEAPSMTVINQWQQALASGNLNGFVRSLAPQHPQ 190

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIA--QTEKAIAFYQDILSRGGWPELPIRPL 102
           ++ ++    + LA           I+ K+T+   Q    ++  +DIL R G       P+
Sbjct: 191 YARMHQALKSLLADTRPWPR----IVDKQTLRPGQISNDVSALRDILQRNGMMSSANEPV 246

Query: 103 HL-----GNSSVSV----------QRLRERL----------IISGDLDPSKGLSVAFD-- 135
                  G     +            L  R            +SGD+  S      F+  
Sbjct: 247 KPAAEVVGAVDAPLVHDDDNAQPDANLLTRADNNRVVSPSANLSGDVTDSAAAPNVFNGQ 306

Query: 136 -----------AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
                        +  A+K FQ   GL+  G +   T E +NV    R   L +N+ R++
Sbjct: 307 AALGSQANTYSPQLVEALKRFQRWQGLEADGAIGMRTREWLNVSPQQRATLLALNIQRLR 366

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L +       ++VNIP  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 367 LLPDDM--QNGIMVNIPNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLNPPW 424

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--R 299
            +P ++++KD++  +++DP YL  +   ++     E   V    ++W++    +F +  R
Sbjct: 425 NVPTTLVRKDIVPKVKRDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSTVSAASFPYRIR 484

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D
Sbjct: 485 QAPGATNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLLRD 544

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
              W+   I   +K   T  V +   +PV+  Y++AW  +D   Q+R DIY  DN  
Sbjct: 545 -VGWNDARISGTLKEGNTRFVPIRQRIPVNLYYLTAWVAEDGQPQYRTDIYNYDNTA 600


>gi|294140649|ref|YP_003556627.1| putative peptidoglycan binding domain-containing protein
           [Shewanella violacea DSS12]
 gi|293327118|dbj|BAJ01849.1| putative peptidoglycan binding domain protein [Shewanella violacea
           DSS12]
          Length = 475

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 178/342 (52%), Gaps = 4/342 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +    T   I +   +  R  W EL     L LG+S   V  +  RL + GDL     ++
Sbjct: 121 KDYLTTSNKIRYLLWLEQRDDWSELASNTWLKLGDSHSLVPEISSRLKVLGDLRQYDPIN 180

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FDA V + VK FQ+RHGL   G++   TL  +N+    R   L +N +     L   +
Sbjct: 181 TLFDANVNNGVKRFQLRHGLTLDGIIGPETLSWINMKPVKRAELLAINFINKTGYLA-SV 239

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
             R++++NIPA  LE ++NG+V L+S VIVG+  RQTP L SRI+ ++ NP W +PRS++
Sbjct: 240 EPRFLIINIPAFELELIDNGQVALQSRVIVGKPYRQTPQLSSRISNLVINPSWRVPRSLL 299

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMA 309
            +D++  +R+D  Y++  N  + D  G+ V     +W      +F +R  Q PG+ N + 
Sbjct: 300 TRDLLPKVREDGGYIQARNFDVFDNNGEIVSKTSQEWQDLAHGHFPYRLVQIPGEGNTLG 359

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F + ++ Y+HDT +  LF    R  +SGC+R+ N+  L  W+  +     +  ++
Sbjct: 360 RYKFYFENEHSVYLHDTVDKELFEESNRALSSGCIRIENVEGLANWMASNLVRDKQTWVD 419

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
              +  KT    L   +P++ VY +AW  +    QFR+DIY 
Sbjct: 420 MQPERHKTQWFSLEQSLPIYLVYWTAWVDQWGNAQFRNDIYH 461


>gi|269967085|ref|ZP_06181153.1| putative amidase [Vibrio alginolyticus 40B]
 gi|269828344|gb|EEZ82610.1| putative amidase [Vibrio alginolyticus 40B]
          Length = 477

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 184/418 (44%), Gaps = 39/418 (9%)

Query: 6   KINKILYCFFVYLILPM----GLSLVEKPIHASVLDEIINESYHSIV-NDRFDNFLARVD 60
           +    L+    ++ LP      LS++   I    L + +      +  +D F +  + + 
Sbjct: 86  EGINWLFTDKAHVTLPAPSIDTLSVLSNEITVGKLGQFLASLRSPLQTDDAFYSAYSSLS 145

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                  P       A  +  +A   DIL          RPL           L ER+ I
Sbjct: 146 EHSQYQYP-------AYQQTGLARVGDILEN--------RPL-----------LIERMEI 179

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            G D+     ++  +D  +E A+K FQ  HGL   G++  +T+  +N     R+  L +N
Sbjct: 180 VGVDVSYLDLVTEEYDEQLELAIKEFQRIHGLKEDGVIGPNTIRWINFSPQERLHLLALN 239

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +   +++     V VN+P   +    +G+    S V+VGR  R+TPI+   ++ ++
Sbjct: 240 SERSRIWSKER--DNVVFVNVPGYEVTYWHDGQPLFESKVVVGRASRKTPIMSVALDSVI 297

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEPPNFI 297
            NP W +P +I+ KD++  ++++P YL ++NI +I      + +    ++W +  P  F 
Sbjct: 298 LNPTWNVPWTIMVKDIIPKVKRNPMYLINHNIQIIRSWTSNEIIDPTTINWATVNPRTFP 357

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q  G  NA+   K    +    Y+HDTP   LF    R  +SGCVRV +   L   
Sbjct: 358 YRMRQASGLQNALGLYKFNMPNPQAIYLHDTPSKNLFEQDRRAFSSGCVRVEHADQLAEL 417

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L K      R   +     R  T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 418 LFKTQGLEERLAKKRESSRRSNTSVPLGERIQVHIIYQTAWL-EEGTLYYRDDIYKYD 474


>gi|254473448|ref|ZP_05086845.1| peptidoglycan-binding domain 1 protein [Pseudovibrio sp. JE062]
 gi|211957564|gb|EEA92767.1| peptidoglycan-binding domain 1 protein [Pseudovibrio sp. JE062]
          Length = 625

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 107/404 (26%), Positives = 176/404 (43%), Gaps = 15/404 (3%)

Query: 35  VLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW 94
           VL  +        +ND          +    D       +    +  +A Y   L+    
Sbjct: 216 VLKNVFISPQVPKLNDMLTQMEETRSLAQFFDGLEPEAPSYDILKDQLARYNAALTSDYP 275

Query: 95  PELPIRP-LHLGNSSVSVQRLRERLIISGDLD---------PSKGLSVAFDAYVESAVKL 144
             +   P + LG++   V +L +RL   G             ++     ++  +   VK 
Sbjct: 276 VYIEDGPSIRLGDTGGRVAQLEKRLQAEGYAPYYSDYTGTSETEVPPTFYNDDMVELVKD 335

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ RHGL   G+V   T  A+N  ++ R  Q+ VNL R++       G RYV VN+    
Sbjct: 336 FQKRHGLTVDGVVGKKTRAALNASLEDRRNQILVNLERMRWDDPLPSG-RYVKVNVAEQM 394

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           +  +E   V   +  +VG+    TP+          NP W +P SI   + +  LR++  
Sbjct: 395 VRVMEGTDVLYETRSVVGKPRNATPLFSDTFEYAEINPTWGVPWSIATNEYLPKLRKNAS 454

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTY 322
            L    I++  + GK V    ++W++     F +  RQ  G+ NA+ + K  F +++N Y
Sbjct: 455 ALSGTGINVY-KNGKRVDPTAINWSNVSKRKFGYQLRQKAGRKNALGAVKYMFPNKHNIY 513

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDTP   LFN   R  + GC+RV++       LL  +   SR  +E++    KT  +KL
Sbjct: 514 LHDTPSKRLFNKDQRAFSHGCIRVQDPFTFGEVLLSGS-GHSRAKMEKLRARGKTVRLKL 572

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
              VPVH  Y +A++  D  +QFR+DIY  D   +  +   +D 
Sbjct: 573 TETVPVHLRYYTAFAGVDGELQFREDIYKQDKAILEALLTSQDA 616


>gi|312171965|emb|CBX80222.1| Uncharacterized protein ycbB [Erwinia amylovora ATCC BAA-2158]
          Length = 615

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 126/477 (26%), Positives = 198/477 (41%), Gaps = 74/477 (15%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEK---PIHASVLDEIINE-----SY 44
           M+GYL        K    LY    Y +     +++ +    +    LD  +         
Sbjct: 131 MLGYLQFTSSVPAKGEAWLYSTVPYRLEAPSTTVINQWQQALAQGNLDSFVRSLAPRHPQ 190

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIA--QTEKAIAFYQDILSRGGWPELPIRPL 102
           +  ++    + LA           I+ K+T+   Q    +   +DIL R G       P 
Sbjct: 191 YVRMHQALKSLLADTRPWPQ----IVDKQTLRPGQISNDVPALRDILQRNGMMSAANEPA 246

Query: 103 HL----------------------------GNSSVSVQRLRERLIISGDLDPSKGL---- 130
                                         G +S  V    +   ISGD   +       
Sbjct: 247 RPPVEVVGAVNAPLVHDDDNAQPDTGLGGQGENSAVVSPSAK---ISGDASNAAAEPNVF 303

Query: 131 ---------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
                    +  +   +  A+K FQ   GL+  G +   T + +NV    R   L +N+ 
Sbjct: 304 TGQAALGSPTNTYTPQLVEALKRFQRWQGLEADGAIGLRTRQWLNVSPPQRATLLALNIQ 363

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++ LL   M    ++VNIP  SL    NG+  L S VIVGR DR+TP++ S +N ++ N
Sbjct: 364 RLR-LLPDDMH-NGIMVNIPNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLN 421

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF 298
           P W +P ++++KD++  ++QDP YL  +   ++     E   V    ++W+     +F +
Sbjct: 422 PPWNVPTTLVRKDIVPKVKQDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSMVSAASFPY 481

Query: 299 --RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   L
Sbjct: 482 RIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLL 541

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L D   W    I   +K   T  V +   +PV+  Y++AW  +D + QFR DIY  D
Sbjct: 542 LHD-VGWDDARISGTLKEGNTRFVPIRHRIPVNLYYLTAWVAEDGLPQFRTDIYNYD 597


>gi|292487843|ref|YP_003530718.1| hypothetical protein EAMY_1360 [Erwinia amylovora CFBP1430]
 gi|292899070|ref|YP_003538439.1| peptidoglycan binding protein [Erwinia amylovora ATCC 49946]
 gi|291198918|emb|CBJ46028.1| putative peptidoglycan binding protein [Erwinia amylovora ATCC
           49946]
 gi|291553265|emb|CBA20310.1| Uncharacterized protein ycbB [Erwinia amylovora CFBP1430]
          Length = 615

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 126/477 (26%), Positives = 198/477 (41%), Gaps = 74/477 (15%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEK---PIHASVLDEIINE-----SY 44
           M+GYL        K    LY    Y +     +++ +    +    LD  +         
Sbjct: 131 MLGYLQFTSSVPAKGEAWLYSTVPYRLEAPSTTVINQWQQALAQGNLDSFVRSLAPRHPQ 190

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIA--QTEKAIAFYQDILSRGGWPELPIRPL 102
           +  ++    + LA           I+ K+T+   Q    +   +DIL R G       P 
Sbjct: 191 YVRMHQALKSLLADTRPWPQ----IVDKQTLRPGQISNDVPALRDILQRNGMMSAANEPA 246

Query: 103 HL----------------------------GNSSVSVQRLRERLIISGDLDPSKGL---- 130
                                         G +S  V    +   ISGD   +       
Sbjct: 247 RPPVEVVGAVNAPLVHDDDNAQPDTGLGGQGENSAVVSPSAK---ISGDASNAAAEPNVF 303

Query: 131 ---------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
                    +  +   +  A+K FQ   GL+  G +   T + +NV    R   L +N+ 
Sbjct: 304 TGQAALGSPTNTYTPQLVEALKRFQRWQGLEADGAIGLRTRQWLNVSPPQRATLLALNIQ 363

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++ LL   M    ++VNIP  SL    NG+  L S VIVGR DR+TP++ S +N ++ N
Sbjct: 364 RLR-LLPDDMH-NGIMVNIPNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLN 421

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF 298
           P W +P ++++KD++  ++QDP YL  +   ++     E   V    ++W+     +F +
Sbjct: 422 PPWNVPTTLVRKDIVPKVKQDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSMVSAASFPY 481

Query: 299 --RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   L
Sbjct: 482 RIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLL 541

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           L D   W    I   +K   T  V +   +PV+  Y++AW  +D + QFR DIY  D
Sbjct: 542 LHD-VGWDDARISGTLKEGNTRFVPIRHRIPVNLYYLTAWVAEDGLPQFRTDIYNYD 597


>gi|293396754|ref|ZP_06641030.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291421018|gb|EFE94271.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 572

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 96/309 (31%), Positives = 151/309 (48%), Gaps = 9/309 (2%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
            +      + + +   VK FQ   GL   G++   T E +NV   +R   L +N+ R++ 
Sbjct: 265 AASMADNLYSSELVEGVKRFQKWQGLSTDGIIGVRTREWLNVSPQMRASLLALNIQRLRI 324

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L  +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W 
Sbjct: 325 LPGRV--SNGIMVNIPNYSLVYYQNGNEVLSSRVIVGRPSRKTPMMSSALNNVVVNPPWN 382

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQ 300
           +P +++++D++    +D  Y + +   ++     +   +    +DWN     NF +  RQ
Sbjct: 383 VPTTLVREDIVPKAMRDANYFRKHGYTVLSGWSNDAEVIDPSMIDWNMVSARNFPYRIRQ 442

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D 
Sbjct: 443 APGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLLQDA 502

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGI 419
             W+   +   +K   TT V +   +PV   Y++AW   D   QFR DIY  DN V  G 
Sbjct: 503 -GWNNSRVSSTLKQGNTTYVNVRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDNTVRSGA 561

Query: 420 IPLPEDHPI 428
             L +   +
Sbjct: 562 QILAQAEKL 570


>gi|257095730|ref|YP_003169371.1| peptidoglycan-binding domain 1 protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048254|gb|ACV37442.1| Peptidoglycan-binding domain 1 protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 542

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 107/388 (27%), Positives = 174/388 (44%), Gaps = 21/388 (5%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW----PELP 98
            + ++ +D+  +   R                  +  +A+A Y+ +     W    P LP
Sbjct: 143 LHSAMADDQMPDLARRAAPRSAD---------YERLRQALAAYRAVAGHPAWQQELPPLP 193

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G +   V RL  RLI+  DL         ++  +   +K FQ RHGL P G++ 
Sbjct: 194 SGKLAPGQAYSGVSRLTARLIVLADLPVGTLPPPRYEGSLVDGIKSFQERHGLTPDGVIG 253

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE----NGKVG 214
             T E + V    R+ QL++ L R++    Q+ G R ++VN+P   L   +        G
Sbjct: 254 KETFEQLKVSPGARVGQLELALERLRWTPLQRQG-RIIVVNVPEFMLHTYQMNDKGSDPG 312

Query: 215 LRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
               VIVG     +TP+  + +  + F+PYW +P SI + + +  LR DP Y +     +
Sbjct: 313 PVMRVIVGNARKTRTPLFDAEMRFVEFSPYWNVPPSISRGETLPRLRSDPGYFERQGFEL 372

Query: 274 IDEKGKEV-FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           +   G+ +  + E   ++        RQ PG  NA+   K  F + +N Y+H TP   LF
Sbjct: 373 VTSDGRVLGSLPEGGLDALAQGRMRIRQKPGARNALGDIKFVFPNTDNIYLHHTPTAQLF 432

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
               R  + GC+RV    DL  ++L   P W+R  I + +K  K+  ++L  E+PV   Y
Sbjct: 433 KRDRRDFSHGCIRVEAPADLAEFVLAGEPEWTRQRIIQAMKRGKSATLRLKEEIPVVIAY 492

Query: 393 ISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            +A   +D  + F  DIYGLD      +
Sbjct: 493 RTATV-RDGRVHFFPDIYGLDRALRDAL 519


>gi|256823023|ref|YP_003146986.1| ErfK/YbiS/YcfS/YnhG family protein [Kangiella koreensis DSM 16069]
 gi|256796562|gb|ACV27218.1| ErfK/YbiS/YcfS/YnhG family protein [Kangiella koreensis DSM 16069]
          Length = 570

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 121/362 (33%), Positives = 188/362 (51%), Gaps = 10/362 (2%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
             S +   +  K +A  +       WP + ++P +    +   ++ +  RL+  GDL   
Sbjct: 205 APSSQEYIELRKYLAELRSRTVSP-WPAIDLQPSIKPQMADPRLEAIAVRLMFWGDLPAD 263

Query: 128 ----KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
                   + ++  +  AV+ FQ+RHGL   G++   T+ A+N+    RI QL VNL +I
Sbjct: 264 WAYLAPFPMRYEDGLIRAVEHFQLRHGLVADGVLGKKTIAALNITPQQRIEQLVVNLEQI 323

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +   E K   R + VNIP+  L A+ENG+V LR  VIVG++ R+TPI   +I  ++ NP 
Sbjct: 324 R-WHELKPASRLIKVNIPSFELLALENGEVRLRMPVIVGQLKRKTPIFEEKIQYLVLNPT 382

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QD 301
           WV+P  +  KD + L++Q+PQYL DN   +  +  K      +DW      NF +R  Q 
Sbjct: 383 WVVPWELATKDKLPLIQQNPQYLLDNQFSVYLQDFKIEDPTRIDWAQVTRANFPYRLVQA 442

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  NA+   K  F +    Y+HDTP+  LFNN +R  +SGC+R++  +DL  W+L+ T 
Sbjct: 443 PGSGNALGQVKFMFPNPYEVYLHDTPDKSLFNNELRAFSSGCIRIQRPLDLLWWILR-TN 501

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            +S   IE  +  + T  + L + VP+   Y +A+   D  IQFR DIY  D      + 
Sbjct: 502 GFSDIDIENQLNKKHTNTISLTSPVPIRLEYRTAYWGLDQTIQFRADIYQRDTKLYQALQ 561

Query: 422 LP 423
            P
Sbjct: 562 QP 563


>gi|312887097|ref|ZP_07746701.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311300409|gb|EFQ77474.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 550

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 182/374 (48%), Gaps = 21/374 (5%)

Query: 49  NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP--LHLGN 106
           +   D+ L        ++ P+            +  Y+ + +   W  +  +   L  G+
Sbjct: 186 DQYLDSLLKAPAKSFSANEPVY--RQYELLRHFLKIYRSLDAADEWKPVDTKSVNLKPGD 243

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +S +++ ++ RL+   D       + ++DA +  AVK FQ R+GLD SG ++  T+ AMN
Sbjct: 244 TSAAIKEIKIRLLRLQDF-QGDTFNESYDADLIIAVKQFQYRNGLDTSGRLNKETIMAMN 302

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
           VP+ +RI+Q+ VN+ R +  L   +   ++ VNIP  +L       +     V+VG+   
Sbjct: 303 VPLKIRIKQILVNMERAR-WLPVSLNADFLAVNIPEFTLHVYHADSLLWSCPVVVGQKVH 361

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           QT I +  I  ++F+PYW IP+SI++ +++  L++ P YL  + + +             
Sbjct: 362 QTSIFYGEIKYVVFSPYWNIPQSIVRAEVVPGLKKSPDYLLRHQMEI------------- 408

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                +    I RQ PG  N++   K  F +  N Y+HDTP+  LF    R  + GC+R+
Sbjct: 409 --TGYKEGLPIVRQKPGPENSLGLVKFLFPNSYNIYLHDTPKKSLFGETTRDFSHGCIRI 466

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
                L  +LLK+   WS   I+  + + K   V L  +VPV   Y +A++ +  ++ FR
Sbjct: 467 MEPAKLAAFLLKNHNKWSGIKIKRAMNSGKEQYVSLEHKVPVFITYFTAFTDRRGLLNFR 526

Query: 407 DDIYGLDNVHVGII 420
            DIY LD+    +I
Sbjct: 527 KDIYSLDDRLARMI 540


>gi|237807403|ref|YP_002891843.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
 gi|237499664|gb|ACQ92257.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
          Length = 514

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 120/386 (31%), Positives = 183/386 (47%), Gaps = 9/386 (2%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI 99
            N S  +     +D  L R D     +      E      + +        +  WP LP 
Sbjct: 119 FNPSTSATGRHAYDELLQRTDPDSAINKLRPQTENYLTNRRVLLSLLSESRKAPWPALPA 178

Query: 100 RPLHLGNSSVSVQRLRERLIISGDL-----DPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             +  G+S  ++  +R  L+ SGDL      P +     +D     AV+ FQ RHGLD  
Sbjct: 179 LKVRPGDSHDALPVIRNILLRSGDLQANTLTPQQMQLTTYDVQTVQAVEHFQQRHGLDAD 238

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G++   TL  + +P  +R   L  +++R   L +     RYVLVNIP   L  ++  +  
Sbjct: 239 GVIGRRTLNWLRLPPQVRAVILARSILR-SDLPQNMSSRRYVLVNIPEFRLRVLDKKQEI 297

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
             S VIVG++ RQTPIL S I+ I+ NP W +P SI+QKD++  L +D  +L      ++
Sbjct: 298 FSSRVIVGQIKRQTPILSSEISSIVVNPAWHVPASILQKDLVPKLAKDKHFLDKGQFELV 357

Query: 275 DEKGKEVFVEEVDWNSPEPP-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
           D +G  V    + W+  E    +  RQ PG  NA+   K    + +  Y+H T  P  F 
Sbjct: 358 DSQGITVDPAAMVWDGTEENFPYQLRQKPGDHNALGRYKFYLPNNDAIYLHSTSSPGYFK 417

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
             +R  +SGCVRV    D    LLKD+  W+   +++++K   T  + +   VPV+ VY 
Sbjct: 418 RDLRALSSGCVRVEEADDFARLLLKDSK-WNINKLDQMLKEDTTKWLSMTDPVPVYTVYW 476

Query: 394 SAWSPKDSIIQFRDDIYGL-DNVHVG 418
            +W  K   +QFRDDIY   D+  + 
Sbjct: 477 RSWVDKQGQLQFRDDIYQFEDDARMA 502


>gi|160875046|ref|YP_001554362.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS195]
 gi|160860568|gb|ABX49102.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS195]
 gi|315267278|gb|ADT94131.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS678]
          Length = 521

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 107/361 (29%), Positives = 175/361 (48%), Gaps = 12/361 (3%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPS 127
           I +     +  K +     + +   W  L +   L +G S   +  + +RL + GDL   
Sbjct: 160 IPTDAQYQRVLKQVTHLVQLDATEPWETLVLDEKLTVGMSHPLLDTIAKRLWLLGDLAIE 219

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
              ++ +   +   VK FQ RHGL   G++   TL  +N     R   L  N +R +   
Sbjct: 220 PMTNLVYSEELVVGVKRFQHRHGLKQDGVIGKQTLYWLNQSPKARAVLLAKNTIRQRVF- 278

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           E+K+   Y+L+N+PA  +  V+NG   L S VIVG+  RQTP+L S+I+ ++ NP W +P
Sbjct: 279 ERKLEPSYLLINVPAFEMILVDNGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVP 338

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKI 305
            SI+++D++  +R++  YL +    + D  G+ V     +W      +F +   Q PG  
Sbjct: 339 SSILRRDILPQIRRNGHYLNERQFDVYDYNGQLVQHMPEEWQGLASTSFPYQLVQRPGAK 398

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTP 361
           NA+   K  F +  + Y+H T EP LFN   R  +SGC+R+  + +L  W    L+KD  
Sbjct: 399 NALGKYKFHFDNSFSVYLHGTSEPSLFNKDDRALSSGCIRIEKVTELAQWFKEHLVKDKR 458

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            W +   +      +     L+ ++PVH VY +AW       Q+R DIY L+      +P
Sbjct: 459 LWDKLAPDVT----EPQWFSLSQKLPVHLVYWTAWLDDSGQEQYRSDIYHLEAELTNAVP 514

Query: 422 L 422
            
Sbjct: 515 A 515


>gi|329298736|ref|ZP_08256072.1| murein L,D-transpeptidase [Plautia stali symbiont]
          Length = 590

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 95/293 (32%), Positives = 150/293 (51%), Gaps = 8/293 (2%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
               +  +D+ +   VK FQ    L   G +   T E +NV   +R   L +N+ R++ L
Sbjct: 284 PSASNNVYDSTLVEGVKRFQHWQELADDGAIGPRTREWLNVSPQMRAALLALNIQRLR-L 342

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           L   M    ++VNIP  SL    NG   L S VIVGR DR+TP++ S +N ++ NP W +
Sbjct: 343 LPDDMH-NGIMVNIPNYSLTYYNNGNTILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNV 401

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF--RQD 301
           P +++++D++  ++QDP YL  +   ++     +   +    +DW+     +F +  RQ 
Sbjct: 402 PTTLVRQDIVPKVKQDPSYLYKHGYTLLSGWSADAEVIDPSVIDWHMVSAASFPYRIRQA 461

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D  
Sbjct: 462 PGASNSLGRYKFNMPSSDAIYLHDTPNHGLFQRDIRALSSGCVRVNKASELADLLLQDA- 520

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            W+   I + +K   T  V +   +PV+  Y++AW   D   Q+R DIY  DN
Sbjct: 521 GWNDSRISDTLKQGDTRYVPIRHRIPVNLYYLTAWVADDGQPQYRTDIYNYDN 573



 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 45/142 (31%), Gaps = 33/142 (23%)

Query: 1   MVGYLK--------INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL+            LY    Y +    LS              IN+  +++     
Sbjct: 109 MLGYLQFVANVPTQGETWLYSNVPYKLTMPSLSA-------------INQWQNAVNGGGS 155

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSV 111
             F+  +        P+ S        KA+     +     WP+L     L  G  S  V
Sbjct: 156 RAFVVSLQPQHPQYAPMHSAL------KAL-----LTDNRPWPQLRDKGTLRPGQISDDV 204

Query: 112 QRLRERLIISGDLDPSKGLSVA 133
             LRE L  +G L  +   +  
Sbjct: 205 PALREILQRTGMLTGTHSATPT 226


>gi|222109387|ref|YP_002551651.1| erfk/ybis/ycfs/ynhg family protein [Acidovorax ebreus TPSY]
 gi|221728831|gb|ACM31651.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax ebreus TPSY]
          Length = 533

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 120/423 (28%), Positives = 181/423 (42%), Gaps = 20/423 (4%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDR--FDNFLARVDMGIDSDIPIISKETIAQTEKAIA 83
           L    I  + L+E  + S     + R      LA   +    D  I            +A
Sbjct: 100 LHGGRIDPARLNERYDHSRRPQPDLRAALQTALADGQIQQARDAAIPRVPMYPALRALLA 159

Query: 84  FYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDP-------SKGLSV 132
            Y+ + +   W    P LP R L  G     +  L ERL+  GDL P       +     
Sbjct: 160 HYRALGAHPAWAQPLPALPGRKLTPGQPWEGLGVLAERLVALGDLPPQPTGEPPAASAPA 219

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +   +  A   FQ RHGL+  G++ ++TL A+NVP   R  Q+ + + R++       G
Sbjct: 220 QYTPVLVEAATAFQRRHGLEADGVLGATTLAALNVPPAARAEQIALQMERLR-WTPVLQG 278

Query: 193 LRYVLVNIPAASLEAVE--NGKVGLR--STVIVGRV-DRQTPILHSRINRIMFNPYWVIP 247
            R + VN+P   L A E   G++ LR    VIVG+  D +TP+    +  I F+PYW IP
Sbjct: 279 PRMIAVNVPEYRLRAYEYAGGRITLRLSMAVIVGKALDTRTPLFDEDMQSIEFSPYWNIP 338

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + + +  LR+DP YL    +  +   G           +        RQ PG +NA
Sbjct: 339 PSIARGETVPRLRRDPGYLARQGMEFVSAAGVSTDTTPEMLGAVVAGQARIRQRPGPLNA 398

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    + +N Y+H T  P LF    R  + GCVRV   + L  ++L+D PTW+   
Sbjct: 399 LGDIKFVLPNNDNIYLHHTSAPTLFGRSRRDLSHGCVRVGEPVALAQFVLQDDPTWTVER 458

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
           I   +   K   V+L   VPV   +I+    +D    F  D+YG D     ++      P
Sbjct: 459 IRAAMAQPKPVFVRLPHPVPVIITHITVVV-QDGRPHFYGDLYGHDRKLASLLRQHSAKP 517

Query: 428 IDS 430
            D+
Sbjct: 518 YDA 520


>gi|295688991|ref|YP_003592684.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter segnis ATCC 21756]
 gi|295430894|gb|ADG10066.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter segnis ATCC 21756]
          Length = 468

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 105/364 (28%), Positives = 169/364 (46%), Gaps = 20/364 (5%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRE 116
           R+   + S  P  +          +  Y+ + ++GGW  +P  P L  G     V+ LR 
Sbjct: 121 RLAAWLASLPPPYTG--YQTLMTGLTTYRGLAAKGGWRVVPAGPSLTEGLVDPRVKALRA 178

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           RL +  D   +   S  +DA +  AV+  Q R GL+P G+V   TL A+NVPV+ R+ Q+
Sbjct: 179 RLAVE-DPTVALTGSDVYDAALVQAVQRAQKRFGLNPDGVVGPGTLNALNVPVERRVDQI 237

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
           + N+ R +  L Q +    + VNI AA +   +     L    + GR   +TP+L S I+
Sbjct: 238 EANMERWR-WLPQTLPADRIQVNIAAAVMSVFQQDTPTLTMRAVTGRPGDETPMLSSMIH 296

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
            I+ NP W +P+SI  K++    + +P YL  N+  +I                      
Sbjct: 297 SIVLNPPWNVPQSIATKELWPKEKANPGYLARNDFIVIPTGD---------------GGS 341

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             +Q  G   A+   K +F +    Y+HDTP    F++  R  + GCVR++  I+L   +
Sbjct: 342 RLQQKAGPKAALGQVKFDFNNPYGVYLHDTPSRSKFDSFSRLASHGCVRLQKPIELIKLM 401

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           +   P W+   I+  + +  T   KL  ++ V  +Y +A+   D  + FRDD YG D   
Sbjct: 402 MAGDPVWTPEKIDATLASGDTVRAKLPQQMAVFLLYWTAYVTPDGQVNFRDDPYGWDKEL 461

Query: 417 VGII 420
           V  I
Sbjct: 462 VQRI 465


>gi|332525152|ref|ZP_08401329.1| peptidoglycan-binding domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332108438|gb|EGJ09662.1| peptidoglycan-binding domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 547

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 112/407 (27%), Positives = 182/407 (44%), Gaps = 22/407 (5%)

Query: 43  SYHSIVNDR--FDNFLA--RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW---- 94
                 + R   D  LA   + + +    P++     A+  +A+A Y+ +     W    
Sbjct: 145 PERPPFDARAVLDAGLAAGSLALAVRRAEPVL--PQYAELRQALARYRTLEHDPAWAAPL 202

Query: 95  PELP----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P LP     R L  G +   +  L  RL+  GDL         +   +   V+ FQ RHG
Sbjct: 203 PPLPQVGRTRKLEPGAAWPGLPALAARLVALGDLPAGPHAGTVYAEPLVGGVRRFQQRHG 262

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE- 209
           +   G++ ++T   + V    R  QL + L R++         R V+VNIP   L A E 
Sbjct: 263 VSADGVIGAATFSRLEVKPAARAEQLVLALERLR-WTPLLESRRMVVVNIPEFVLRAYEV 321

Query: 210 -NGK--VGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
            +G+  V  R  V+VG+  D++TP++ +++  I F+PYW +P SI++ + +  LR+DP Y
Sbjct: 322 QDGRITVVQRMRVVVGQALDKRTPLIDAQMRAIEFSPYWNVPPSIVRAETLPKLRRDPDY 381

Query: 266 LKDNNIHMIDEKGKE-VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           L       +   G     V     ++     +  RQ PG  NA+   K  F +    Y+H
Sbjct: 382 LAREGFEFVAGDGSVHGEVSAEALDALAAGRWRIRQRPGPRNALGDIKFVFPNAEQIYLH 441

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
            TP   LF    R  + GCVR+ + + L +++L+D P W    I E +   ++  ++LAT
Sbjct: 442 HTPSTALFARDRRDFSHGCVRIEDPLALAMFVLRDQPDWPEARIREAMDAGESRTLRLAT 501

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPIDSD 431
            V V   Y +A   KD  + F DDIY  D      +       + +D
Sbjct: 502 PVRVLIAYGTALV-KDGQVYFFDDIYRQDPRLQAALRERAAPAVRAD 547


>gi|157961780|ref|YP_001501814.1| peptidoglycan-binding domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157846780|gb|ABV87279.1| Peptidoglycan-binding domain 1 protein [Shewanella pealeana ATCC
           700345]
          Length = 451

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 100/341 (29%), Positives = 167/341 (48%), Gaps = 4/341 (1%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
               +  I   Q +  +  W  +    L   G S+  +  +  RL + GD   +   S  
Sbjct: 108 YLHLQNRIRHLQWLAEQDWWQVIESERLIRPGESNPIIPDVVRRLWLLGDASSAATGSNE 167

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
            +  +  A+K FQ+RHGL    ++   TL+ +NVP + R   L  N ++  + + Q+   
Sbjct: 168 LNLPIVDALKRFQLRHGLKADAIIGPETLKWLNVPPEQRASILAKNFIQRAEFMAQR-DD 226

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R++++NIPA  +E  ++G++ L S VIVG+  R TPIL S I+ ++ NP W +P+ I+  
Sbjct: 227 RFLVINIPAFEMELFDHGELELASRVIVGKPYRPTPILSSSISNVVINPSWRVPKKIMYN 286

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMAST 311
           D++  +R+D  Y+   N  + D     V      W+      F FR  Q PG  N +   
Sbjct: 287 DLLPQVRKDGNYISQRNFDVFDRNNNLVMRTAEQWSDLAKGPFPFRFVQRPGTNNTLGRY 346

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F +  + Y+HDT +P LF    R  +SGC+R+ N+  L  W+  +     +  ++  
Sbjct: 347 KFYFPNDFSVYLHDTSDPKLFQRSNRALSSGCIRIENVQGLANWMAANLVKDKQTWVDRH 406

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              ++T    L + + VH VY +AW    +  Q+RDDIY L
Sbjct: 407 ADRKRTQWFALKSSLNVHLVYWTAWIDGSNQAQYRDDIYQL 447


>gi|300022478|ref|YP_003755089.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524299|gb|ADJ22768.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 423

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 138/374 (36%), Positives = 212/374 (56%), Gaps = 14/374 (3%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP--------LHLG 105
           +F+   +         +SK  IA T+ AI  Y +I+++GGWP+LP  P        L  G
Sbjct: 45  DFVREWEANPPKGYATLSKANIAATKTAIQRYTNIVAQGGWPQLPEPPNKTPRDSLLQYG 104

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +  +V  LR+RL  SGDL      S  FD+ V+ A+K FQ  +GL P+G+ D  T+ A+
Sbjct: 105 TTDAAVALLRQRLATSGDLTGGNISSTYFDSDVDKALKRFQASNGLTPTGIADKRTIVAL 164

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           NVP D R++QL+ N+ R+++   +  G +YV+VNIPAA +EAV+NG++  R   +VG+ D
Sbjct: 165 NVPADARLKQLKANVSRLEEFTAKA-GKKYVVVNIPAAQVEAVQNGQIVARYAAVVGKAD 223

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR----QDPQYLKDNNIHMIDEKGKEV 281
           R TP+LH+ I  + FNP W +P ++I +D++   R    +    L   +I      GK+V
Sbjct: 224 RPTPLLHTPITDLSFNPVWRLPPTVISEDLIPRGREMQSKGQNVLLKFHIDAY-SNGKKV 282

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
              +++W++ +P  + + Q PGK N +   KI F S ++ YMHDTP   +F    R  +S
Sbjct: 283 DPAKINWSTVKPGTYTYSQQPGKENPLGFLKINFDSAHSVYMHDTPSDRIFGRNYRSASS 342

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GC+RV NI +L  WLL +   W    I  +    +   ++L   V + FVYISAW+  D 
Sbjct: 343 GCIRVHNIENLAAWLLAEQRGWDSERIASMKANGERLDLRLKKPVQLLFVYISAWATPDG 402

Query: 402 IIQFRDDIYGLDNV 415
           I+QFR D+Y  D +
Sbjct: 403 IVQFRRDLYQKDGI 416


>gi|332532859|ref|ZP_08408732.1| hypothetical protein PH505_aj00520 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037705|gb|EGI74156.1| hypothetical protein PH505_aj00520 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 441

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 115/357 (32%), Positives = 178/357 (49%), Gaps = 10/357 (2%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
            S + I +TEKAI +YQ+I+++GG+  L     L LG+++  V  L +RL    DL  + 
Sbjct: 70  YSAQLIERTEKAINWYQEIVNKGGFTHLYNDELLELGSNNKQVSLLAQRLYQERDLKTNV 129

Query: 129 GLSV--AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                  FD  +E AVK FQ RHGL   G V   T  ++NVP   ++ +L++N  RI   
Sbjct: 130 CDEAICTFDKDIEQAVKQFQSRHGLKVDGRVGKRTFASLNVPAQQKLDKLKLNFYRITNF 189

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                  +YV VNIP  SL  V+ G V L++ VIVG+   +TP     I + + NP W I
Sbjct: 190 AGAS-DEQYVYVNIPEYSLRFVKAGDVKLKNNVIVGKPSWETPAFSDEIEKFVVNPEWRI 248

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSPEPPNF--IFRQD 301
           P SI  K++   + +DP YL  NNI +        + V    +DW+S +P  F     + 
Sbjct: 249 PTSIATKEIAPKVAEDPDYLVKNNIEIRKNSYLDSQTVNPSNIDWDSIKPYQFDHFLVKR 308

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK-DT 360
            G+ N +   K  F +    Y+HDTP    F+   R  + GC+R+     L   ++K + 
Sbjct: 309 AGEENPLGEVKYLFPNAEAIYVHDTPAKHRFSQANRALSHGCIRIEKPFSLAREIIKYEG 368

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
              +  +++  +    T    L   +P+H VY +AW  ++ ++ FRDDIY  D   +
Sbjct: 369 EAQTLNNMDTALAQNSTQTFYLDEPLPIHLVYWTAWVDENKLVNFRDDIYQRDKKAL 425


>gi|260753690|ref|YP_003226583.1| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258553053|gb|ACV75999.1| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 502

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 109/409 (26%), Positives = 188/409 (45%), Gaps = 21/409 (5%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDE--IINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
            +   L    ++    + A+  D+   +    +    D  +   +       +++P    
Sbjct: 98  LISASLDYARAIHSGRLSANDFDKNWGMKPDPYDPWPDFKNAVNSNTLGDWAANLPPP-Y 156

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
              A  +  + +Y+ I  +GGWP +P    L +G+ +  V+ LR RL I  D +     S
Sbjct: 157 SGYAGLKNGLIYYRAIAEKGGWPVVPTGADLTVGSDNPRVKTLRRRLAIE-DKELPDNGS 215

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FDA +++AVK  Q R+GL+P+G+V   TL+A+N PV  RI Q+  N+ R +  L + +
Sbjct: 216 SHFDAALKAAVKRAQQRYGLNPTGVVSGQTLQALNQPVKSRIHQIMANMERWR-WLPRNL 274

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               + VN+ AA L   E  +  +    + GR   +TP+L S I  ++ NP W +P SI 
Sbjct: 275 PENRIQVNVAAAVLTLFEKNQPVMSMKSVTGRPGNETPMLRSTIYSLVINPPWNVPDSIA 334

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
           +K++    +  P YL+     +I E G+                   +Q PG  N++   
Sbjct: 335 KKELWPKEKAHPGYLQAAGFKIIGESGQGQ---------------RLQQKPGPRNSLGQL 379

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K +F +  + Y+HDTP    F+   R E+ GC+R+ + + L   LL   P W+   +   
Sbjct: 380 KFDFPNSYSVYLHDTPGRGAFSRYGRLESHGCIRLEHPVALGERLLAADPAWTGDRLRSE 439

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +   +T  V+L   V V   Y +A+   ++ + FR D Y  D +    I
Sbjct: 440 IDKNETERVRLKQPVAVFLFYWTAFGNGENALSFRSDPYKWDELLAQKI 488


>gi|212635582|ref|YP_002312107.1| hypothetical protein swp_2794 [Shewanella piezotolerans WP3]
 gi|212557066|gb|ACJ29520.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 464

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 182/352 (51%), Gaps = 4/352 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +   Q +  I+  + +     W  + I  L   G S  S+  + +RL++ GD   S   +
Sbjct: 106 DNYLQLQNRISHLRWLAEHQQWTPIYIEGLIRPGMSHKSLLAIADRLMLLGDGVASAQSA 165

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
            + D  + + V+ FQ RHGL+P G++   TL+ +NV    R R L  + ++  + + Q+ 
Sbjct: 166 ESLDDRLVNGVRRFQRRHGLNPDGIIGPETLKWINVDPMERARILAKSFVQKAEFMSQR- 224

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
             +++++NIPA  +E +  GKV L S VIVG+  RQTP+L S I+ ++ NP W +P+ I+
Sbjct: 225 AEQFLVINIPAYEMELISQGKVELESRVIVGKPYRQTPLLSSAISNVVINPSWRVPKKIL 284

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMA 309
             D++  +R D  Y++     + D +G +V      W       F FR  Q PG  N + 
Sbjct: 285 FNDLLPQVRIDGNYIEQREFDVFDREGNQVVRSAQQWRDLAAGPFPFRFVQRPGVNNTLG 344

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +  + Y+HDT +P LFN   R  +SGC+R+ N+  L  W+  +     +  ++
Sbjct: 345 RYKFYFPNDYSVYLHDTSDPKLFNKSYRALSSGCIRIENVEGLANWMAANLVKDKQTWVD 404

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
             +   KT    L + + VH VY +AW  KD++ QFR+DIY   +++    P
Sbjct: 405 RHIDRNKTQWFALNSTLNVHLVYWTAWIDKDNLAQFRNDIYQKQSINDASDP 456


>gi|119471875|ref|ZP_01614183.1| hypothetical protein ATW7_04554 [Alteromonadales bacterium TW-7]
 gi|119445248|gb|EAW26538.1| hypothetical protein ATW7_04554 [Alteromonadales bacterium TW-7]
          Length = 453

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 126/426 (29%), Positives = 199/426 (46%), Gaps = 20/426 (4%)

Query: 3   GYLKINK--ILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60
           G+ K NK  +    FV L       L+       VL  + + S  +  + R+        
Sbjct: 21  GFTKTNKATLKGALFVSLASMFASPLLANDDLDGVL--LASSSLTTYSSQRY------TQ 72

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLI 119
                     S + I +TEKAI +YQ+I++RGG+  LP   L  LG++S +V  L  RL 
Sbjct: 73  TKDSYYFDQYSAQLIKRTEKAINWYQEIVNRGGFISLPASELLELGSNSKAVSLLAMRLF 132

Query: 120 ISGDLDPS--KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
              DL  +        FD ++E AVK FQ RHGL+  G V  +T   +N+  + ++ +L+
Sbjct: 133 QEQDLRTNVCSKAPCIFDKHIERAVKQFQHRHGLNVDGRVGKNTFAKLNISAEQKLNKLK 192

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +N  RI          +YV VNIP   L  V+ G V L++ VIVG+   +TP     I +
Sbjct: 193 LNFYRITNF-AGSSDEQYVYVNIPEYQLRYVKVGDVKLQNNVIVGKPSWETPAFSDEIEK 251

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSPEPP 294
            + NP W IP SI  +++   + +DP YL  NNI +        + V    +DW+S +P 
Sbjct: 252 FVVNPEWRIPISIATREIAPKVAEDPDYLVKNNIEIRKNSYIDSQTVNPNNIDWDSIKPY 311

Query: 295 NF--IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            F     +  G+ N +   K  F +    Y+HDTP    F+   R  + GC+R+ +   L
Sbjct: 312 QFDHFLVKRAGEKNPLGEVKYLFPNPEAIYVHDTPAKQRFSQTRRALSHGCIRIEDPFSL 371

Query: 353 DVWLLKDTP-TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
              ++K     ++   + +      T    L   +P+H VY +AW  ++ ++ FRDDIY 
Sbjct: 372 AQEIIKHQGEEYALEQVNDARSENSTQTFYLDEPLPIHLVYWTAWVDENKLVNFRDDIYK 431

Query: 412 LDNVHV 417
            D   +
Sbjct: 432 RDQKAL 437


>gi|254230281|ref|ZP_04923670.1| putative peptidoglycan binding domain protein [Vibrio sp. Ex25]
 gi|151937178|gb|EDN56047.1| putative peptidoglycan binding domain protein [Vibrio sp. Ex25]
          Length = 345

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 92/316 (29%), Positives = 153/316 (48%), Gaps = 8/316 (2%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G+   +   L ER+ + G D+      +  +D  +E AVK FQ  HGL   G++  +T
Sbjct: 30  RVGDQLENKPLLIERMEVVGVDVSYLDITTQQYDEELELAVKEFQRIHGLKEDGVIGPNT 89

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           +  +N     R+  L +N  R +   + +     V VN+P   +    +G+    S V+V
Sbjct: 90  IRWINFSPQERLHLLALNSERSRIWSKDR--DNVVFVNVPGYEVTYWHDGQPLFESKVVV 147

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GK 279
           GR  R+TPI+   ++ ++ NP W +P +I+ KD++  ++++P YL ++NI +I      +
Sbjct: 148 GRASRKTPIMSGTLDSVILNPTWNVPWTIMVKDIIPKVKRNPMYLINHNIQIIRSWTSNE 207

Query: 280 EVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +    ++W +  P  F +R  Q  G  NA+   K    +    Y+HDTP   LF    R
Sbjct: 208 IIDPTTINWATVNPRTFPYRMRQASGLHNALGLYKFNMPNPQAIYLHDTPSKNLFERDRR 267

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGCVRV +   L   L K      R   +     R  T V L   + VH +Y +AW 
Sbjct: 268 AFSSGCVRVEHADQLAELLFKTQGLEERLAKKRESTRRSNTSVPLGERIQVHIIYQTAWL 327

Query: 398 PKDSIIQFRDDIYGLD 413
            ++  + +RDDIY  D
Sbjct: 328 -EEGTLYYRDDIYKYD 342


>gi|312887255|ref|ZP_07746859.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311300567|gb|EFQ77632.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 544

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 98/371 (26%), Positives = 174/371 (46%), Gaps = 21/371 (5%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP--ELPIRPLHLGNSSV 109
            D+ +        +  P+            +  Y  +  R  W    L  +    G+++ 
Sbjct: 186 LDSLIKMPSKQAAAAEPVY--RQYELLRSYLRKYYLLNERDKWSNITLTGKVFKPGDTAA 243

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            +  +++RL +  D      L  A++A +++A+  FQ R+GL  +G+++  T+  MNVP+
Sbjct: 244 VIATVKKRLYLLEDFK-GDTLDRAYNADLDTAILQFQSRNGLLANGLLNKETVAEMNVPL 302

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             RI+Q+ VN+ R +  L   +   Y+ VNIP   L       +     V+VG+   QT 
Sbjct: 303 KKRIQQILVNMERCR-WLPISLNSDYLAVNIPEFKLHVFHADSLLWSCNVVVGQTMHQTT 361

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           + +  +  ++F+PYW +P SI+QK+++  +++   YL  + + +    G    +  +   
Sbjct: 362 VFYGDVKYVVFSPYWNVPPSIVQKEVVPEMKRHRDYLSTHRMQI---TGYADGLPTI--- 415

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                    RQ PG  N++   K  F +  N Y+HDTP   LF    R  + GC+RV+N 
Sbjct: 416 ---------RQLPGPENSLGLVKFLFPNSYNIYLHDTPSKSLFGESARAFSHGCIRVQNP 466

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
             L  +LLKD   W    I+  +   K   V L  +VPV   Y +A++  ++ + FR DI
Sbjct: 467 TKLANFLLKDQKNWDAQKIDVAMHAGKEQYVTLQNKVPVFIAYFTAFTDGNNKLNFRKDI 526

Query: 410 YGLDNVHVGII 420
           Y LD+    ++
Sbjct: 527 YNLDDHLASML 537


>gi|87120480|ref|ZP_01076374.1| hypothetical protein MED121_22022 [Marinomonas sp. MED121]
 gi|86164123|gb|EAQ65394.1| hypothetical protein MED121_22022 [Marinomonas sp. MED121]
          Length = 561

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 98/384 (25%), Positives = 178/384 (46%), Gaps = 17/384 (4%)

Query: 58  RVDMGIDSDIPIISK--ETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRL 114
                + + +P ++         +K + +YQDI ++     +    PL LG+    + +L
Sbjct: 182 NTASDMVNYLPQLAPRHPDYQILQKWLVYYQDISAKQKDIRVTAGVPLSLGDQGPRIAQL 241

Query: 115 RERLIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           R RL+  GD+  S        FD  ++ A+  FQ RH L   G   S T+E +N+P+ LR
Sbjct: 242 RARLVQLGDIRFSTRTIQEDKFDKKLKQALINFQRRHDLTADGHAGSQTIEMLNIPISLR 301

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            +Q+  NL R +  L  ++    + V++    +  + N +      V++G+ +R+TP+  
Sbjct: 302 AKQIAYNLERWR-WLPTELEAERIWVDLTDYKVHTILNDQHS-TMKVVIGKKERKTPVFK 359

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWN 289
             +  ++ NP W +P  I Q+ ++     +P YL +    +        KE+    +DW 
Sbjct: 360 GEMTYMVTNPTWRVPHRIAQESLLPKAHANPNYLIEQGYKVYSSWTIGAKELDPSLIDWR 419

Query: 290 SPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
              P N  + F Q P + NA+   K  F +RN  Y+HDTP   LF    R  +SGC+R+ 
Sbjct: 420 KVTPENLKYRFEQTPDEGNALGLYKFMFPNRNEIYLHDTPAKHLFKESNRAFSSGCIRLE 479

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
                   L+  +       ++  +++++T  V L  ++PV+ VY +    ++ +  FR 
Sbjct: 480 KPQLFANNLVAGSKQ--VEALQNAIQSKETKVVSLPKQLPVYIVYFTVVPDRNGMPGFRK 537

Query: 408 DIYGLDNVH---VGIIPLPEDHPI 428
           DIY  D +    +G  P P +  +
Sbjct: 538 DIYERDILMEEAMGYFPSPANAAL 561


>gi|256830357|ref|YP_003159085.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256579533|gb|ACU90669.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM
           4028]
          Length = 543

 Score =  384 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 101/405 (24%), Positives = 177/405 (43%), Gaps = 25/405 (6%)

Query: 40  INESYHSIVNDRFDNFL--------ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
           I E++     DRFD            R+   +    P +      +  +A+A Y+ +   
Sbjct: 136 IQENFTPPAPDRFDPLAHLQRAVREKRLREAVREAAPQV--PLYGRLREALAQYRQLSED 193

Query: 92  G----GW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
                 W    P LP   L +G S   +  +  RLI  GDL     ++  ++ ++   + 
Sbjct: 194 PVFSQLWQSSLPPLPNGKLEIGESYAGMPLVVLRLIALGDLPRETVMTERYEGHIVKGIM 253

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            FQ+RHGL+P G++   T   + V    R+RQ+++++ R++         R + VNIP  
Sbjct: 254 DFQVRHGLEPDGVIGRKTYAQLGVTPSARVRQIELSMERLR-WTPLLHAPRMIAVNIPEH 312

Query: 204 SLEAVE--NG--KVGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
            LEA E  NG  +V     VI+G   + +TP+   R+  I F+PYW +P SI + +++  
Sbjct: 313 VLEAYEVQNGTVQVQTTMRVIIGSALNMRTPLFDGRMRSIEFSPYWNVPLSIARSEVVPK 372

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
           + +DP Y        +   G+ +  +   D  +        RQ PG  NA+   K  F +
Sbjct: 373 ILRDPSYFVRQGFEFVAADGQIITTLSMDDLEAVRSGQMRIRQRPGPRNALGDIKFIFPN 432

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
           +++ ++H TP   LF    R  + GC+RV + + L  ++L+    W    I E +    +
Sbjct: 433 KDSIFLHHTPTTHLFEKQRRDLSHGCIRVEDPVGLAKFVLQHDQVWGEERIREAMSAGVS 492

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + ++L     V   Y +        + F  DIYG D +    +  
Sbjct: 493 STLRLREPPQVVLAYNTVQVKNGGRVHFFQDIYGQDKLLDQALRR 537


>gi|304411335|ref|ZP_07392949.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
 gi|307305343|ref|ZP_07585091.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
 gi|304350190|gb|EFM14594.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
 gi|306911646|gb|EFN42071.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
          Length = 521

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 173/355 (48%), Gaps = 12/355 (3%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
             +  K +     + +   W  L +   L +G S   +  + +RL + GDL      +  
Sbjct: 166 YQRVLKQVTHLVQLDATEPWETLVLDEKLTVGMSHPLLDTIAKRLWLLGDLAIEPKTNFV 225

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   +   VK FQ RHGL   G++   TL  +N     R   L  N +R +   E+K+  
Sbjct: 226 YSEELVVGVKRFQQRHGLKQDGVIGKQTLYWLNQSPKARAVLLAKNTIRQRVF-ERKLEP 284

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            Y+L+N+PA  +  V+NG   L S VIVG+  RQTP+L S+I+ ++ NP W +P SI+++
Sbjct: 285 SYLLINVPAFEMILVDNGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVPSSILRR 344

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           D++  +R++  YL +    + D  G+ V     +W      +F +   Q PG  NA+   
Sbjct: 345 DILPQIRRNGHYLNERQFDVYDYNGQLVQHMPEEWQDLASTSFPYQLVQRPGAKNALGKY 404

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYH 367
           K  F +  + Y+H T EP LFN   R  +SGC+R+  + +L  W    L+KD   W +  
Sbjct: 405 KFHFDNSFSVYLHGTSEPSLFNKDDRALSSGCIRIEKVTELAQWFKEHLVKDKRLWDKLA 464

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            +      +     L+ ++PVH VY++AW       Q+R DIY L+      +P 
Sbjct: 465 PDVT----EPQWFSLSQKLPVHLVYLTAWLDDSGQEQYRSDIYHLEAELTNAVPA 515


>gi|254490473|ref|ZP_05103659.1| Putative peptidoglycan binding domain protein [Methylophaga
           thiooxidans DMS010]
 gi|224464217|gb|EEF80480.1| Putative peptidoglycan binding domain protein [Methylophaga
           thiooxydans DMS010]
          Length = 501

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 111/361 (30%), Positives = 180/361 (49%), Gaps = 20/361 (5%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGL- 130
               Q    ++ Y+    RGGW  +P  PL   G+S   V  LR RLI     +PS  L 
Sbjct: 148 PQYHQLTHFLSQYRGYQLRGGWQTVPTMPLLRPGDSHQHVPSLRARLITE---NPSLNLI 204

Query: 131 ----SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
               +  +D  +   VK FQ RHGL   G+V S T  A+N  VD  I +++VNL R +  
Sbjct: 205 EVEQTTIYDRQLVETVKQFQARHGLKIDGIVGSETRAALNQSVDDLITKIRVNLERFR-W 263

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           L   +G RY+LVN+ +  L AVE+G++ L   VIVG+  R TP  +S +  ++ NPYW +
Sbjct: 264 LPDDLGKRYLLVNLGSHQLSAVEDGQIKLNMKVIVGKSQRATPSFNSAMTHLVINPYWNV 323

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP----PNFIFR 299
           P  + ++D++   + +P Y   N  ++     +    V    ++W+          +  +
Sbjct: 324 PHKLARRDLLPKQQANPDYFFLNEFNLFLRNAEVHTPVDPYRINWDEVSALSSEFPYRLQ 383

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG++NA+   K  F +  N Y+HDTP+  LF+   R  +SGC+RV + + L  + L +
Sbjct: 384 QRPGELNALGRLKFMFPNPWNIYLHDTPDKALFSENQRNFSSGCIRVEDPLALGQFSLNE 443

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
               S   ++  + + +    KL T +PV+ VY + W  +   ++F  D YG D+     
Sbjct: 444 NNAQS--WLQSQIDSGQNRGRKLETPLPVYAVYFTIWPDQ-GEVRFSPDPYGRDSTIAKR 500

Query: 420 I 420
           +
Sbjct: 501 L 501


>gi|120434782|ref|YP_860468.1| peptidoglycan binding domain-containing protein [Gramella forsetii
           KT0803]
 gi|117576932|emb|CAL65401.1| protein containing peptidoglycan binding-like domain [Gramella
           forsetii KT0803]
          Length = 543

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 115/413 (27%), Positives = 199/413 (48%), Gaps = 10/413 (2%)

Query: 8   NKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL---ARVDMGID 64
           N +L        L +   L    +  + + EI     ++I  ++          +   +D
Sbjct: 125 NDLLELLLTDSYLRLAKDLATGKLDPTKIHEIWGTPLNTIDAEKVLEKAISEGNIHKSLD 184

Query: 65  SDIPIISKETIAQTEKAIAFYQ-DILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISG 122
           S  P        Q + A+  ++ + +  G   ++    L   G++S  +  + +RL   G
Sbjct: 185 SLKP--DHLVYHQLKSALNKFKKNGIEEGPTTKISTGKLIRPGDNSDRMPSIAKRLSELG 242

Query: 123 DLDP-SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
             +  S   +  ++  ++ AVK FQ+ H L    ++ S+T+  +N+    R  Q+ VNL 
Sbjct: 243 YFNGISDSTNTIYNEDIQKAVKEFQLDHDLQEDALLGSTTISNLNLTRRDRYHQILVNLE 302

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R +    + +G  Y++VNIP   L  ++         ++VG   R+TPI    I  I++N
Sbjct: 303 RWR-WYPKNLGKHYIIVNIPDYELSVIKEEDTIRTHKIMVGTEVRKTPIFSDEIGYIIYN 361

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W IP +I + D++   ++D  Y +  NI + D +G +V    VDWNS +   + +RQ 
Sbjct: 362 PTWTIPPTIKKNDVIPGAKKDIGYFQKKNIKIYDSEGTDVDPASVDWNSSKARGYTYRQP 421

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
            G  N +   KI + +    Y+HDTP   LF    R ++SGCVRV++ + L  +LL D  
Sbjct: 422 AGPTNPLGIVKIIYPNEYLIYLHDTPSRSLFEKNARAQSSGCVRVQDALGLAKYLLSDQD 481

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           ++    IEE++K+ KTT + +  +V VH  Y + +  KD  I+F DDIY LD 
Sbjct: 482 SYDDEKIEEILKSGKTTQITVKQKVKVHHFYWTVYQKKD-AIKFIDDIYNLDQ 533


>gi|153000449|ref|YP_001366130.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS185]
 gi|151365067|gb|ABS08067.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS185]
          Length = 521

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 106/361 (29%), Positives = 174/361 (48%), Gaps = 12/361 (3%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPS 127
           I +     +  K +     + +   W  L +   L +G S   +  + +RL + GDL   
Sbjct: 160 IPTDAQYQRVLKQVTHLVQLDATEPWETLVLDEKLTVGMSHPLLDTIAKRLWLLGDLAIE 219

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
              ++ +   +   VK FQ RHGL   G++   TL  +N     R   L  N +R +   
Sbjct: 220 PMTNLVYSEELVVGVKRFQHRHGLKQDGVIGKQTLYWLNQSPKARAVLLAKNTIRQRVF- 278

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           E K+   Y+L+N+PA  +  V+NG   L S VIVG+  RQTP+L S+I+ ++ NP W +P
Sbjct: 279 ESKLEPSYLLINVPAFEMILVDNGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVP 338

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKI 305
            SI+++D++  +R++  YL +    + D  G+ V     +W      +F +   Q PG  
Sbjct: 339 SSILRRDILPQIRRNGHYLNERQFDVYDYNGQLVQHMPEEWQGLASTSFPYQLVQRPGAK 398

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTP 361
           NA+   K  F +  + Y+H T EP LF+   R  +SGC+R+  + +L  W    L+KD  
Sbjct: 399 NALGKYKFHFDNSFSVYLHGTSEPSLFSKDDRALSSGCIRIEKVTELAQWFKEHLVKDKR 458

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            W +   +      +     L+ ++PVH VY +AW       Q+R DIY L+      +P
Sbjct: 459 LWDKLAPDVT----EPQWFSLSQKLPVHLVYWTAWLDDSEQEQYRSDIYHLEAELTNAVP 514

Query: 422 L 422
            
Sbjct: 515 A 515


>gi|116620897|ref|YP_823053.1| peptidoglycan binding domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116224059|gb|ABJ82768.1| Peptidoglycan-binding domain 1 protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 401

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 105/360 (29%), Positives = 175/360 (48%), Gaps = 12/360 (3%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDL-- 124
           P +  +   +T +A+  Y+ + +      +P+   +  G++      L  RL + GDL  
Sbjct: 34  PSVPPDEYERTLRALDQYRALAAAPDEVFVPVTGTVKPGDAYSDAPLLIRRLSLLGDLAA 93

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           D     S  ++  +  AVK FQ RHGL P G ++++TL  +NVP+  R+RQL+++  R +
Sbjct: 94  DAVPSDSDVYEGELVEAVKRFQSRHGLKPDGRIEATTLGQLNVPLCARVRQLELSAERWR 153

Query: 185 KLLEQKMGLRYVLVNIPAASLEAV----ENGKVGLRSTVIVGR-VDRQTPILHSRINRIM 239
           +          VL N+P   L A           L   V+VG+  D ++PIL S++  ++
Sbjct: 154 RHPYDPTRPAIVL-NLPEFRLRAYGGTDAGSDPELEMKVVVGKAPDHKSPILLSQLQAVI 212

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNF 296
           F PYW +P SI + +++ L+R+DP ++  N   ++  +G+   E  + E           
Sbjct: 213 FRPYWKVPVSIQRNELLPLIRKDPAWVSANRFELVTPQGEVAEEEKLSEETLEDISTGKL 272

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             RQ PG  N++   K  F +    YMHDT    LF    R  + GC+RV    DL  W+
Sbjct: 273 QLRQKPGPKNSLGLVKFLFPNEYGVYMHDTAAHSLFARERRDLSHGCIRVEKPEDLAAWV 332

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           L++   W R  IEE ++  +   VK+   + +  +Y +A   K+  + F  DIYG D V 
Sbjct: 333 LREQSDWPRERIEEAMQGTEPVSVKVKRPIQIVMMYSTASVMKNGEVHFFRDIYGEDAVL 392


>gi|120598924|ref|YP_963498.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|120559017|gb|ABM24944.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. W3-18-1]
          Length = 484

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 107/354 (30%), Positives = 171/354 (48%), Gaps = 12/354 (3%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
                K I+    + S+  W  L +   L +G +   V  + +RL + GD+     +   
Sbjct: 129 YQAVLKKISQLIQLESQFSWETLMLENKLTVGQTHPIVNTIAKRLWLLGDMPKEVDVEQV 188

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   +   +K FQ+RHGL   G++   TL  +N     R   L  N +R +    +K+  
Sbjct: 189 YTDELMLGIKRFQLRHGLQTDGVIGKQTLYWLNQSPRQRAVLLARNELRQRIF-SRKLTP 247

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           RY+L+N+PA  ++ VE  +  L S VIVG+  RQTPIL S+I+ I+ NP W +P SI+++
Sbjct: 248 RYLLINVPAFEMKLVEQEQTVLTSKVIVGKSSRQTPILDSQISSIVLNPSWRVPSSILRR 307

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           D++  +R+D  YL+D    + D  G+ +F    +W       F +   Q PG  NA+   
Sbjct: 308 DILPHIRKDGYYLQDREFDVYDYSGQLIFHTTEEWQELASSRFPYQLVQRPGPKNALGKY 367

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYH 367
           K  F +  + Y+H T EP LF    R  +SGC+R+  + +L  W    L+KD   W R  
Sbjct: 368 KFHFDNSFSVYLHGTSEPALFKRENRALSSGCIRIEKVNELAQWFKRNLVKDKGLWDRL- 426

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
                         L+ ++PVH VY +AW        +R+DIY L+      + 
Sbjct: 427 ---APNVTDPQWFALSEKLPVHLVYWTAWLDDKGQDHYRNDIYHLEAEFTNAVT 477


>gi|146292990|ref|YP_001183414.1| peptidoglycan binding domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|145564680|gb|ABP75615.1| Peptidoglycan-binding domain 1 protein [Shewanella putrefaciens
           CN-32]
          Length = 484

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 107/354 (30%), Positives = 171/354 (48%), Gaps = 12/354 (3%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
                K I+    + S+  W  L +   L +G +   V  + +RL + GD+     +   
Sbjct: 129 YQAVLKKISQLIQLESQFSWETLMLENKLTVGQTHPIVNTIAKRLWLLGDMPKEVDVEQV 188

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   +   +K FQ+RHGL   G++   TL  +N     R   L  N +R +    +K+  
Sbjct: 189 YTDELMLGIKRFQLRHGLQTDGVIGKQTLYWLNQSPRQRAVLLARNELRQRIF-SRKLTP 247

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           RY+L+N+PA  ++ VE  +  L S VIVG+  RQTPIL S+I+ I+ NP W +P SI+++
Sbjct: 248 RYLLINVPAFEMKLVEQEQTVLTSKVIVGKSSRQTPILDSQISSIVLNPSWRVPSSILRR 307

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           D++  +R+D  YL+D    + D  G+ +F    +W       F +   Q PG  NA+   
Sbjct: 308 DILPHIRKDGYYLQDREFDVYDYSGQLIFHTPEEWQELASSRFPYQLVQRPGPKNALGKY 367

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYH 367
           K  F +  + Y+H T EP LF    R  +SGC+R+  + +L  W    L+KD   W R  
Sbjct: 368 KFHFDNSFSVYLHGTSEPALFKRENRALSSGCIRIEKVNELAQWFKRNLVKDKGLWDRL- 426

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
                         L+ ++PVH VY +AW        +R+DIY L+      + 
Sbjct: 427 ---APNVTDPQWFALSEKLPVHLVYWTAWLDDKGQDHYRNDIYHLEAEFTNAVT 477


>gi|319426480|gb|ADV54554.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens 200]
          Length = 484

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 107/354 (30%), Positives = 171/354 (48%), Gaps = 12/354 (3%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
                K I+    + S+  W  L +   L +G +   V  + +RL + GD+     +   
Sbjct: 129 YQAVLKKISQLIQLESQFSWETLMLENKLTVGQTHPIVNTIAKRLWLLGDMPKEVDVEQV 188

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   +   +K FQ+RHGL   G++   TL  +N     R   L  N +R +    +K+  
Sbjct: 189 YTDELMLGIKRFQLRHGLQTDGVIGKQTLYWLNQSPRQRAVLLARNELRQRIF-SRKLTP 247

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           RY+L+N+PA  ++ VE  +  L S VIVG+  RQTPIL S+I+ I+ NP W +P SI+++
Sbjct: 248 RYLLINVPAFEMKLVEQEQTVLTSKVIVGKSSRQTPILDSQISSIVLNPSWRVPSSILRR 307

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           D++  +R+D  YL+D    + D  G+ +F    +W       F +   Q PG  NA+   
Sbjct: 308 DILPHIRKDGYYLQDREFDVYDYSGQLIFHTPEEWQELASSRFPYQLVQRPGPKNALGKY 367

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYH 367
           K  F +  + Y+H T EP LF    R  +SGC+R+  + +L  W    L+KD   W R  
Sbjct: 368 KFHFDNSFSVYLHGTSEPALFKRENRALSSGCIRIEKVNELAQWFKRNLVKDKGLWDRL- 426

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
                         L+ ++PVH VY +AW        +R+DIY L+      + 
Sbjct: 427 ---APNVTDPQWFALSEKLPVHLVYWTAWLDDKGQDHYRNDIYHLEAEFTNAVT 477


>gi|256422945|ref|YP_003123598.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256037853|gb|ACU61397.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 534

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 174/371 (46%), Gaps = 22/371 (5%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSVS 110
             L +    +      +  ++ A   K++  Y DI  +  W  + I   +    G+S+  
Sbjct: 177 EVLKKASAVLADKETNMRGQSYAALHKSLQRYVDIAEKNSWDTIRIEKKKRYKKGDSTAV 236

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           +  +++RL  +G+    K  S  F+  +E+AV  F+  HG  P G++  + L  MN+P  
Sbjct: 237 IAWVKKRLQATGEYS-DKDTSTVFNDALETAVTAFEATHGHTPKGVITDTLLREMNMPAI 295

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
             ++++ +NL R+          R +LVNIP   L      K      V+VG+  + T +
Sbjct: 296 KLVQRILINLERM-HWAPANPEGRLILVNIPEFGLHVWNGSKKEFDMPVVVGKEGKSTTM 354

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI-DEKGKEVFVEEVDWN 289
              ++++I+F+PYW +P SI++++++  L ++  Y+   N+ +  +  G  +        
Sbjct: 355 FSGKLDQIVFSPYWNLPNSIVKEEILPALARNKNYISSKNMEITGERNGLPI-------- 406

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                    RQ PGK N +   K  F +  N Y HDT +  LF+   R  + GC+R+ + 
Sbjct: 407 --------VRQKPGKDNPLGQVKFLFPNSFNIYFHDTNQKYLFDRDQRAFSHGCIRLGDP 458

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
           + +  +LL D   WS   I+  + + K   V++   VPV   Y +AW  +   +QFR+DI
Sbjct: 459 VKMANYLLADNQNWSAERIDSAMNSGKEKYVRVKDPVPVLITYYTAWVDEAGKLQFREDI 518

Query: 410 YGLDNVHVGII 420
           Y  D    G +
Sbjct: 519 YDHDTYMAGKL 529


>gi|241762099|ref|ZP_04760182.1| Peptidoglycan-binding domain 1 protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373349|gb|EER62949.1| Peptidoglycan-binding domain 1 protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 502

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 111/409 (27%), Positives = 188/409 (45%), Gaps = 21/409 (5%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDE--IINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
            +   L    ++    + AS  D+   +    +    D F N +    +G  +       
Sbjct: 98  LISASLDYARAIHSGRLSASDFDKNWGMKPDPYDPWPD-FKNAVNNNTLGDWAANLPPPY 156

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
              A  +  + +Y+ I  +GGWP +P    L +G+ +  V+ LR R+ I  D +     S
Sbjct: 157 SGYAGLKNGLIYYRAIAEKGGWPVVPTGADLTVGSDNPRVKTLRRRIAIE-DKELPDNGS 215

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FDA +++AVK  Q R+GL+P+G+V   TL+A+N PV  RI Q+  N+ R +  L + +
Sbjct: 216 SHFDAALKAAVKRAQQRYGLNPTGVVSGQTLQALNQPVKSRIHQIMANMERWR-WLPRNL 274

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               + VN+ AA L   E  +  +    + GR   +TP+L S I  ++ NP W +P SI 
Sbjct: 275 PENRIQVNVAAAVLTLFEKNQPVMSMKSVTGRPGNETPMLRSTIYSLVINPPWNVPDSIA 334

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
           +K++    +  P YL+     +I E G+                   +Q PG  N++   
Sbjct: 335 KKELWPKEKAHPGYLQAAGFKIIGESGQGQ---------------RLQQKPGPRNSLGQL 379

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K +F +  + Y+HDTP    F+   R E+ GC+R+ + + L   LL   P W+   +   
Sbjct: 380 KFDFPNSYSVYLHDTPGRGAFSRYGRLESHGCIRLEHPVALGERLLAADPAWTGDRLRSE 439

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +   +T  V+L   V V   Y +A+   ++ + FR D Y  D +    I
Sbjct: 440 IDKNETERVRLKQPVAVFLFYWTAFGNGENALSFRSDPYKWDELLAQKI 488


>gi|258546017|ref|ZP_05706251.1| peptidoglycan binding protein [Cardiobacterium hominis ATCC 15826]
 gi|258518746|gb|EEV87605.1| peptidoglycan binding protein [Cardiobacterium hominis ATCC 15826]
          Length = 599

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 13/329 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             LP   L  G +  +V  LRE+L        + G S  FD  +  AV  +Q  HGL   
Sbjct: 272 QPLPKVTLKQGMNHEAVAILREKLGA----PATDGDSTYFDGALAEAVTAYQQSHGLKAD 327

Query: 155 GMVDSSTLEAMNVPVD-----LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           G+V   T   +N           + +L +N+ R++  + Q MG  YVLVNIP+  ++   
Sbjct: 328 GIVSGKTRNLLNGNKASSGGNASVDRLMINMERLR-WMPQDMGESYVLVNIPSYYVKMYR 386

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
             +    S  +VG+ DRQTP    ++  I+ +P W +P +I++KD +  LR +P     +
Sbjct: 387 GSEEIYASKAVVGQRDRQTPAFTDKLRHIVMSPTWTVPPTIMKKDKINKLRSNPGAFDGS 446

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
              ++   G+ V    VDW++P    +  RQ PG  NA+   K  F +++  Y+HDTP  
Sbjct: 447 FEAVV--GGRVVRPSAVDWSAPGATGYRLRQKPGARNALGRVKFLFPNKHAIYLHDTPSK 504

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVR++   +    LL++T  WS   I++ +   K   V    + P++
Sbjct: 505 SLFGRNDRALSSGCVRLQKPEEFANILLQNT-NWSAERIKKAMNQEKEQWVNTPEQTPIY 563

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            VY + WS  D  IQ  +DIYG D   + 
Sbjct: 564 LVYWTTWSDPDGKIQTANDIYGKDGALLQ 592


>gi|332187614|ref|ZP_08389350.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
 gi|332012362|gb|EGI54431.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
          Length = 510

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 115/406 (28%), Positives = 175/406 (43%), Gaps = 27/406 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDM----GIDSDIPIIS 71
              I  + L      +H   LD         I    +D      D      I   I  + 
Sbjct: 107 PAAIARIALDY-AHAVHVGRLDTADFSKDWGIRPQSYDPLPGFADAVRQDRIADWIAALP 165

Query: 72  KET--IAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSK 128
                       +A Y+ +   GGW  LP    +  G+S   V +LR+RL +        
Sbjct: 166 PPYAGYDTLVTGLARYRAMAEAGGWTALPANASIPYGSSGPLVAQLRKRLAMED--PAVS 223

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
                FD  + +AV+  Q R+GL+P G V S T+ A+NVPV  RIRQ+  N+ R +  L 
Sbjct: 224 QTGATFDEPLLAAVRRAQRRYGLNPVGTVGSQTIAALNVPVSQRIRQIMANMERWR-WLP 282

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           Q++  + V VNI AA L   E     L    + GR   +TP+L S I+ ++ NP W +P 
Sbjct: 283 QQLEAKRVQVNIAAAVLTVFEGDNPVLSMKAVTGRPGNETPMLVSSIHSVVLNPPWNVPS 342

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI  K++    R +P YLK N   +ID       +                Q   + +A+
Sbjct: 343 SIANKELWPKERANPGYLKRNGFRVIDNGDGSKRL----------------QQSSEKSAL 386

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K +F +    Y+HDTP    F+   R  + GCVR+    +L   +LK TP W    +
Sbjct: 387 GRFKFDFPNDFAVYLHDTPAQSGFSKFDRLASHGCVRLEKPAELAGLVLKTTPEWQPAAV 446

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +  + + KT    +   V V+ +Y +A++  D  + FR+D YG D 
Sbjct: 447 DATLASGKTVRASMDEPVAVYLLYWTAFANSDGQVSFREDPYGWDA 492


>gi|217973562|ref|YP_002358313.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
 gi|217498697|gb|ACK46890.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
          Length = 525

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 106/361 (29%), Positives = 173/361 (47%), Gaps = 12/361 (3%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPS 127
           I +     +  K +A    + +   W  L +   L +G S   +  + +RL   GDL   
Sbjct: 164 IPTDLQYQRVLKQVAHLVQLDATDPWETLVLDEKLTVGMSHPLLDTIAKRLWRLGDLAIE 223

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
              +  +   +   VK FQ +HGL   G++   TL  +N         L  N +R +   
Sbjct: 224 PMTNFVYSEELVVGVKRFQQKHGLKQDGVIGKQTLYWLNQSPKASAVLLAKNTIRQRVF- 282

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           E+K+   Y+L+N+PA  +  V+NG   L S VIVG+  RQTP+L S+I+ ++ NP W +P
Sbjct: 283 ERKLEPSYLLINVPAFEMFLVDNGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVP 342

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKI 305
            SI+++D++  +R++  YL +    + D  G+ V     +W      +F +   Q PG  
Sbjct: 343 SSILRRDILPQIRRNGHYLNERQFDVYDYNGQLVQHMPEEWQDLASTSFPYQLVQRPGAK 402

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTP 361
           NA+   K  F +  + Y+H T EP LFN   R  +SGC+R+  + +L  W    L+KD  
Sbjct: 403 NALGKYKFHFDNSFSVYLHGTSEPSLFNKDDRALSSGCIRIEKVTELAQWFKEHLVKDKR 462

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            W +   +      +     L+ ++PVH VY +AW       Q+R DIY L+      +P
Sbjct: 463 LWDKLAPDVT----EPQWFSLSQKLPVHLVYWTAWLDDSGQEQYRSDIYHLEAELTNTVP 518

Query: 422 L 422
            
Sbjct: 519 A 519


>gi|330445733|ref|ZP_08309385.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489924|dbj|GAA03882.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 579

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 120/423 (28%), Positives = 193/423 (45%), Gaps = 40/423 (9%)

Query: 6   KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS 65
           K N  L+      I P+              D  I E  H+    R   F++R+    D 
Sbjct: 169 KGNLWLFGETPPTIFPLPS------------DTFIEELLHNHEQQRLRYFISRLKPHDDE 216

Query: 66  DIPIISK-ETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGD 123
            I +++  + + + +              WP    + +   G    ++  +   L   GD
Sbjct: 217 YIELVAALDELNEIKDM-----------RWPVFLFKGIIRPGQYVNNMDGVVTVLETLGD 265

Query: 124 LDPSKGLSVA------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           + PS+   +           V  A+K FQ RHGL   G++   T + + + +  RIR L 
Sbjct: 266 MTPSEARKIRTQKRKRLSGSVVIAIKRFQERHGLKSDGVIGPQTQQWLALSLKQRIRLLA 325

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +N  R++           V+VNIP+  +    NG+  L S VIVGR  RQTP++ S I  
Sbjct: 326 LNAQRLRLW--SVTPKTGVVVNIPSYYMNLWLNGEKVLGSKVIVGRPSRQTPMMGSDIQS 383

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWNSPEPPN 295
           ++FNPYW +P SI++KD+M  +R++  YL  NN  +I   G  +++ +  + ++   P  
Sbjct: 384 VVFNPYWNVPNSIMKKDIMPKVRRNRSYLSRNNYEVIKGWGSAQKISINSIPYHLLSPNR 443

Query: 296 FIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           F +  RQ PGK NA+   K  F +    Y+HDT    LFN   R  +SGC+RV     L 
Sbjct: 444 FPYRLRQKPGKRNALGLFKFNFPNSQAIYLHDTSSRSLFNKHERALSSGCIRVEQAKSLA 503

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKL--ATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
             LL+ + + S      + ++RKT  + L     VPV  +Y +AW  +  ++ +R DIY 
Sbjct: 504 KVLLEYSGS-SEQRFNNLSRSRKTRTIVLGDGKSVPVDLIYQTAWVDELGLVNYRSDIYK 562

Query: 412 LDN 414
            D 
Sbjct: 563 YDR 565


>gi|283856545|ref|YP_163499.2| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|283775552|gb|AAV90388.2| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 483

 Score =  381 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 111/409 (27%), Positives = 188/409 (45%), Gaps = 21/409 (5%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDE--IINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
            +   L    ++    + AS  D+   +    +    D F N +    +G  +       
Sbjct: 79  LISASLDYARAIHSGRLSASDFDKNWGMKPDPYDPWPD-FKNAVNNNTLGDWAANLPPPY 137

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
              A  +  + +Y+ I  +GGWP +P    L +G+ +  V+ LR R+ I  D +     S
Sbjct: 138 SGYAGLKNGLIYYRAIAEKGGWPVVPTGADLTVGSDNPRVKTLRRRIAIE-DKELPDNGS 196

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FDA +++AVK  Q R+GL+P+G+V   TL+A+N PV  RI Q+  N+ R +  L + +
Sbjct: 197 SHFDAALKAAVKRAQQRYGLNPTGVVSGQTLQALNQPVKSRIHQIMANMERWR-WLPRNL 255

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               + VN+ AA L   E  +  +    + GR   +TP+L S I  ++ NP W +P SI 
Sbjct: 256 PENRIQVNVAAAVLTLFEKNQPVMSMKSVTGRPGNETPMLRSTIYSLVINPPWNVPDSIA 315

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
           +K++    +  P YL+     +I E G+                   +Q PG  N++   
Sbjct: 316 KKELWPKEKAHPGYLQAAGFKIIGESGQGQ---------------RLQQKPGPRNSLGQL 360

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K +F +  + Y+HDTP    F+   R E+ GC+R+ + + L   LL   P W+   +   
Sbjct: 361 KFDFPNSYSVYLHDTPGRGAFSRYGRLESHGCIRLEHPVALGERLLAADPAWTGDRLRSE 420

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +   +T  V+L   V V   Y +A+   ++ + FR D Y  D +    I
Sbjct: 421 IDKNETERVRLKQPVAVFLFYWTAFGNGENALSFRSDPYKWDELLAQKI 469


>gi|83858763|ref|ZP_00952285.1| hypothetical protein OA2633_04651 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853586|gb|EAP91438.1| hypothetical protein OA2633_04651 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 595

 Score =  381 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 114/409 (27%), Positives = 192/409 (46%), Gaps = 41/409 (10%)

Query: 52  FDNFLARVDMGI-DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI--RPLHLGNSS 108
            D  L R   G+ D +   ++        KA   Y   +  GG+ ++P     L LG+SS
Sbjct: 175 LDQMLPRAGAGVLDYEQLSVTHPEYEDLIKARRTYDGYIKSGGFTQVPEPEGLLELGDSS 234

Query: 109 VSVQRLRERLIISGD--------------------------LDPSKGLSVA--------F 134
             V+ LR RL   G                            D +  +S A        F
Sbjct: 235 PVVETLRVRLREEGYRIERPRRPSLMAESQPPLTQVSFITAPDAAAPVSAADWRREMQSF 294

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
              +E+A++ FQ  +GL+  G++  +T+ A+NV  + ++ ++  NL R ++     +G R
Sbjct: 295 SPELEAALRDFQAHNGLEVDGVLGPATIAALNVSAEDKLARIDANLERWRRASP-DLGER 353

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           YV VNIPA +  AV +G   L    IVG   RQTP++  +I  I+ NP+W +P SI+ +D
Sbjct: 354 YVEVNIPAYTARAVRDGDTELEMRSIVGLPARQTPLMSEQIEHIVANPHWYVPESILVRD 413

Query: 255 MMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSPE-PPNFIFRQDPGKINAMASTK 312
            ++ +R+D  YL+D    ++D   G+ +  E +DW++          QDPG  NA+   K
Sbjct: 414 KLSHIREDEAYLEDRGYKVVDRDTGEPLSAETIDWSADGIADQVRLIQDPGDNNALGELK 473

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS-RYHIEEV 371
           I F ++++ Y+H TP   LF    R  +SGC+R+ +   +  W+++     +    I + 
Sbjct: 474 IMFPNQHSVYLHGTPSRHLFERDQRAFSSGCIRLEDPQAMAAWVVEAVTDQNAEAMIAQA 533

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           V + +   + L   +PVH VY +     D  + F  D+Y  D   + +I
Sbjct: 534 VASGENQHIALDAPLPVHVVYRTVEVEDDGDVIFHHDVYDRDPALIALI 582


>gi|167624266|ref|YP_001674560.1| peptidoglycan-binding domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354288|gb|ABZ76901.1| Peptidoglycan-binding domain 1 protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 464

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 105/372 (28%), Positives = 176/372 (47%), Gaps = 11/372 (2%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL- 102
            +S  N   D F+  + +  + +          Q +  I     +  +G W  + I  L 
Sbjct: 84  RNSSTNHLGDPFIRAMALEPELNG-------YLQIQNRIRHLHWLAQQGWWQPIIIDELI 136

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                  S+  + +RL + GD + S   S   D  + SA+K FQ RHGL P  ++   T+
Sbjct: 137 RPSKKHPSIPTIAKRLWLLGDAERSATTSTLLDEKLSSALKRFQRRHGLQPDAIIGPETM 196

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           + +NV    R R L  N +   + + Q+ G +++++NIPA  +     G+V L S VIVG
Sbjct: 197 KWLNVQPIERARMLANNFVLKAEFMAQR-GDQFLVINIPAFEMALFSKGRVELESRVIVG 255

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +  R TP+L   I+ ++ NP W +P+ I+  D++  +R+D  Y+ + N  + D     V 
Sbjct: 256 KPYRPTPLLSGAISNVVINPSWRVPKKILYNDLLPHVRKDGNYIAEGNFDVFDRSNNLVV 315

Query: 283 VEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                W+      F +R  Q PG  N +   K  F +  + ++HDT  P LF    R  +
Sbjct: 316 RTAQQWSDLARGPFPYRFVQRPGYNNTLGRYKFYFPNDFSIFLHDTSNPKLFERSNRALS 375

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
           SGC+RV N+  L  W+  +     +  ++   +  +T    L + + VH VY +AW  + 
Sbjct: 376 SGCIRVENVEGLANWMAANLVKDKQTWVDRHAERTRTQWFALNSTLNVHLVYWTAWIDEH 435

Query: 401 SIIQFRDDIYGL 412
           +  QFR+DIY L
Sbjct: 436 NQAQFRNDIYQL 447


>gi|229591001|ref|YP_002873120.1| hypothetical protein PFLU3558 [Pseudomonas fluorescens SBW25]
 gi|229362867|emb|CAY49777.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 532

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 111/368 (30%), Positives = 175/368 (47%), Gaps = 11/368 (2%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQ 112
             L  +    D   P  S +       A A  +       W  +   PL   G     V 
Sbjct: 171 AGLQDMAQAFDQARP--SADLYRSLRNAYATVRQ-QPLPHWDPVGSGPLLRPGMEDPRVP 227

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            L  RLI  G L  +      +   +  AVK FQ+ H L   G++ + T+  +N+   +R
Sbjct: 228 ELARRLISGGYL-ATASSGKQYHDELVKAVKAFQLSHSLQADGVIGAGTVAELNISPAIR 286

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
             QL++NL R +  L Q +    VLVN+ AA L   ++G    ++ + VGR +RQTP+L 
Sbjct: 287 REQLRINLERFR-WLAQDLEPEGVLVNVAAAQLSVYQSGIPVWQTRLQVGRAERQTPLLK 345

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           SRI R+  NP W IP +I+++D +  +R +P+YL+  N+ ++D +G  +  E++DW    
Sbjct: 346 SRITRLTLNPTWTIPPTIMREDKLPAIRLNPEYLRQQNLQVLDAEGHPLAPEQIDWA--R 403

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
           P N + RQ+ G  N +    + F +  + Y+HDTP   LF    R  +SGCVRV   + L
Sbjct: 404 PGNILLRQEAGPRNPLGKIVMRFPNPYSVYLHDTPSQPLFTKGPRAFSSGCVRVEQPLLL 463

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              L+       R   +E++ T  T   +LAT VPV   Y +    +   + +  DIY  
Sbjct: 464 RDLLVSPA---ERARTDELLATGVTHEFRLATPVPVLLGYWTVEVDRQGGLVYAPDIYAR 520

Query: 413 DNVHVGII 420
           D V +  +
Sbjct: 521 DLVLMKAM 528


>gi|16125758|ref|NP_420322.1| peptidoglycan binding domain-containing protein [Caulobacter
           crescentus CB15]
 gi|221234516|ref|YP_002516952.1| cell wall degradation protein [Caulobacter crescentus NA1000]
 gi|13422888|gb|AAK23490.1| peptidoglycan binding domain protein [Caulobacter crescentus CB15]
 gi|220963688|gb|ACL95044.1| cell wall degradation protein [Caulobacter crescentus NA1000]
          Length = 502

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 109/364 (29%), Positives = 177/364 (48%), Gaps = 20/364 (5%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRE 116
           R+   +++  P  +          +A Y+DI ++GGW  +   P L  G +   V  L  
Sbjct: 155 RLAEWLETLPPPYTG--YQALRTGLATYRDIAAKGGWLPIAAGPELKEGVTGARVVALEA 212

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           RL    D   +   +  FDA +  AV+  Q R GL+P+G+VD +TL A+N+PV+ RI Q+
Sbjct: 213 RLAAE-DPTVAVDAAPVFDAALTQAVQRAQKRFGLNPNGIVDRATLAALNIPVERRIDQI 271

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
             N+ R +  L Q +    + VN+ AA L    +    L    + GR   +TP+L S I+
Sbjct: 272 VANMERWR-WLPQTLPAERIQVNVAAAILSVFHHDTPTLTMRAVTGRPGDETPMLSSMIH 330

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
            I+ NP W +P+SI  K++    R  P YL  N+  +I  +G                  
Sbjct: 331 SIVLNPPWNVPQSIASKEIWPKERASPGYLARNDFIVIPIEGGGT--------------- 375

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             +Q  G + A+   K +F +    Y+HDTP    F++  R  + GCVR++  I+L   +
Sbjct: 376 RLQQKAGPLAALGKVKFDFNNPYGVYLHDTPSRSRFDSFSRLASHGCVRLQKPIELVNEV 435

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           ++D PTW+   + E + + +T   KL  ++ V+ +Y +A+   D  + FR D YG D   
Sbjct: 436 MRDDPTWTPEKVNETLASGETVRAKLPQQIAVYLLYWTAYVTPDGQVNFRQDPYGWDRDL 495

Query: 417 VGII 420
           V  I
Sbjct: 496 VQRI 499


>gi|330722118|gb|EGH00028.1| L2CD-transpeptidase YcbB [gamma proteobacterium IMCC2047]
          Length = 439

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 117/423 (27%), Positives = 202/423 (47%), Gaps = 22/423 (5%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP 68
           K  Y  FV L+L     LV KP+   V+ EI +E   S V     + L   D+      P
Sbjct: 2   KCRYAVFVALLL-----LVFKPVW--VMAEITDELLLSRVTA--PDLLPFQDIQPQLLQP 52

Query: 69  --IISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLD 125
               SK++      A+  Y++I + G W      PL   G+    V +L+  L   GDL 
Sbjct: 53  YQAASKQSFESLADAVLTYENIQNNGRWRTFSAGPLLRQGDRHPQVSQLKAHLQWLGDLP 112

Query: 126 PSKGLSV---AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           P   LS+    FD  +  A+  FQ RH +   G++   T   +NVP   RI QL +N+ R
Sbjct: 113 PQDILSLGSRLFDRALHQALLRFQARHSVKADGVLGPKTRALLNVPPWQRIDQLVLNMYR 172

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            ++   +     Y+ +N+P  +L   + G+V L    +VG+  RQTP   + + +++ NP
Sbjct: 173 QQQ--NEINDDVYLHINLPEYNLRFYQFGEVLLEMRAVVGKRTRQTPEFSAAVTKLIINP 230

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSP--EPPNFI 297
            W +P+SI  +D++  L  DP++L+  N+ ++        EV   +VD++        + 
Sbjct: 231 DWNVPKSIAYRDILPKLHNDPEFLRKRNLRVVSGWQLPRVEVPEHQVDFDRMYQGAEYYR 290

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           F + PG+ N +   K +  S N+ Y+HDT +  LF+   R  +SGC+R+ +   L   L+
Sbjct: 291 FWEPPGETNTLGRMKFQLDSDNSIYLHDTQQKNLFDAESRAFSSGCIRLESPRALADTLM 350

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           +    W+   ++ +        +++   + VH  Y +AW  K  ++ F +D+Y  D+V  
Sbjct: 351 RVANQWTPEVLDPLFDGPDMIKLRVGKNILVHVTYWTAWLDKRGVLHFANDMYERDSVDF 410

Query: 418 GII 420
            ++
Sbjct: 411 AVM 413


>gi|94501826|ref|ZP_01308338.1| hypothetical protein RED65_14387 [Oceanobacter sp. RED65]
 gi|94426047|gb|EAT11043.1| hypothetical protein RED65_14387 [Oceanobacter sp. RED65]
          Length = 628

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 109/395 (27%), Positives = 179/395 (45%), Gaps = 41/395 (10%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPS 127
           + S     +  + +  YQDI   G W  L I  PL  G+    + RL+  L   GD   S
Sbjct: 239 VPSHPGYERLGQELERYQDIAESGLWYPLEIENPLKAGDHHAQIPRLKWMLNAYGDYQKS 298

Query: 128 K-------------------------GLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSS 160
                                          +  D     A+K +Q R+GL P+G +D  
Sbjct: 299 AMDWLVSQTPNSELDPLALERQYRKQPEHQVYRIDENTVRALKHYQKRNGLLPTGRLDQQ 358

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           TL  +N P     +++ +N+ R +  L +++G  Y+LVN+    L     GK  L   VI
Sbjct: 359 TLAQLNEPPYFIAQRIALNMKRWR-YLPKELGEDYILVNMADFRLNYFAKGKRQLNMKVI 417

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           +G+   +TP+L   I+ ++  P W +P  I  +D++   ++DP YL+ +N  + +     
Sbjct: 418 IGKEHLRTPVLAETISSVILAPEWNVPHRIAIRDIIPQAKRDPDYLRKHNFKVYEGWSMP 477

Query: 279 -KEVFVEEVDWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
            KEV +E +D+N  +     +   Q PG  N++ + K  F +  + Y+HDT    LF   
Sbjct: 478 PKEVPLENLDFNGFQSRTNTYRLVQAPGDDNSLGNVKFVFPNDKSIYLHDTNHKELFARD 537

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
           +R  +SGC+RV   + L   LL     W    I  V++ R T PV+L   VPV+ +Y + 
Sbjct: 538 MRALSSGCIRVEQPMALAKALLGRQ-NWDEQLISNVIERRYTRPVRLKDPVPVYLMYWTT 596

Query: 396 WSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPIDS 430
           W  ++  +Q R D+Y  D +        + H +DS
Sbjct: 597 WVNEEGTLQVRRDVYNRDQI------NNQSHKLDS 625


>gi|77459598|ref|YP_349105.1| hypothetical protein Pfl01_3376 [Pseudomonas fluorescens Pf0-1]
 gi|77383601|gb|ABA75114.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
          Length = 537

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 110/400 (27%), Positives = 182/400 (45%), Gaps = 20/400 (5%)

Query: 37  DEIINESYHSIV------NDRFDNFLARVDMGIDSDIPI---ISKETIAQTEKAIAFY-- 85
             ++   +  +        DR    LA    G+  ++P    +++  +AQ +     Y  
Sbjct: 144 GRLLQSHFEPLWHSDETPRDRQAELLAIAVPGVH-NVPAAFDLARPQLAQYQNLRHLYAA 202

Query: 86  QDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVK 143
           Q + +   W  +   PL         V  L  RL   G L+   G    A+   +  AVK
Sbjct: 203 QRLKALPQWTSVGNGPLLRPDMEDKRVPELARRLYSEGYLNSVAGTPDNAYHGVLVEAVK 262

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            FQ  H L   G+V   T+  +N+    R  QL+VNL R +  + Q M    +LVN+ AA
Sbjct: 263 SFQANHSLQADGVVGPGTIAELNISPLTRREQLRVNLERFR-WMAQDMEPDGLLVNVAAA 321

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            L   + G    ++   VGR +RQTP+L SR+ R+  NP W +P +I ++D +  +R+D 
Sbjct: 322 ELTLYQGGLPVWQTRTQVGRAERQTPLLKSRVTRLTLNPTWTVPPTIWKEDKLPEIRKDQ 381

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
            +L   N+ ++D  G+ +   ++DW+   P N + RQD G  N +    I F +  + Y+
Sbjct: 382 TFLSRQNLQVLDANGQPLAAADIDWD--NPGNILLRQDAGPRNPLGQMVIRFPNPFSVYL 439

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF+   R  +SGCVRV + + L   LL       +   + ++ T  T   +L+
Sbjct: 440 HDTPSKALFDKGPRAFSSGCVRVEHPMKLRDLLLSPA---EKARTDTLLATGVTHEFRLS 496

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
             VP+   Y +A       + +  DIY  D+  +  +   
Sbjct: 497 NPVPILMTYWTAQVDGQGRVLYAPDIYSRDSALLAGLDRA 536


>gi|238898896|ref|YP_002924578.1| hypothetical protein HDEF_1835 [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229466656|gb|ACQ68430.1| conserved hypothetical protein, YkuD and peptidoglycan binding
           domains [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 530

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 104/360 (28%), Positives = 173/360 (48%), Gaps = 11/360 (3%)

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISG-- 122
            +  ++ +     +      + +     WP+L  R  L  G SS  +  +++ L   G  
Sbjct: 174 YVNSLAPQHPQYRKMQTELLKLLSDNSPWPKLTERVYLREGYSSKDISNVKKILYRLGIG 233

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           ++  +   S  +   +  A+K FQ   GL   G++   T   +NV   +  R L +N+ R
Sbjct: 234 NMSLTDVDSQVYSHDLVMAIKQFQKNRGLPADGIIGIRTRNWLNVSPKILARLLALNMQR 293

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++           +LVNIP  SL   E GK+ L S VIVGR DR+TP++ S IN+I+ NP
Sbjct: 294 LRFTPADI--QTGILVNIPDYSLNYYEEGKIRLFSKVIVGRPDRKTPVMQSAINQIVINP 351

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF- 298
            W +P S+ ++D++  + ++  YL+++N  ++    +    +  E +DW +    NF + 
Sbjct: 352 DWNVPHSLAREDILPQVIKNIDYLQEHNYRILSSWSQNAEVIDPESIDWENISIENFPYY 411

Query: 299 -RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ  G  N +   K    +R + ++HDTP   +F    R  +SGCVRV+   +L   LL
Sbjct: 412 LRQTLGPNNPLGHYKFNMPNRYSIFLHDTPNKAMFQRYRRAGSSGCVRVQKASELARLLL 471

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           K T   +   I   +K  K+T       +PV   Y++AW  +D   QFR DIY  D   +
Sbjct: 472 KKT-GLTDADILNFLKENKSTYRNTRKRIPVWLYYLTAWVSEDGATQFRTDIYHYDQSVL 530


>gi|167645745|ref|YP_001683408.1| peptidoglycan-binding domain-containing protein [Caulobacter sp.
           K31]
 gi|167348175|gb|ABZ70910.1| Peptidoglycan-binding domain 1 protein [Caulobacter sp. K31]
          Length = 500

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 111/365 (30%), Positives = 164/365 (44%), Gaps = 21/365 (5%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNS-SVSVQRLR 115
           R+   +DS  P  +        K +  Y+DI +RGGW  L    PL LG +    +  L+
Sbjct: 147 RLGPWLDSLPPPYTG--YQTLRKGLTTYRDIAARGGWKPLAGGAPLKLGATGDPRIAALK 204

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
            RL    D       +  FD  ++ A+   Q R GL+P G +  +TL A+NVPV+ RI Q
Sbjct: 205 VRLAAE-DATVVVDKAQVFDEVLQQALMRAQKRFGLNPDGGLGPATLAALNVPVERRIDQ 263

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           +  N+ R +  L +++    + VNI AA +    +    L    + GR   +TP+L S I
Sbjct: 264 ILANMERWR-WLPRELPADRIQVNIAAAVMSVFHDDAPNLTMRAVTGRPGDETPMLQSTI 322

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
           + I+ NP W +P SI  K++    R  P YL  N+  +I                     
Sbjct: 323 HSIVLNPPWNVPSSIATKELWPKERAHPGYLARNDFIVIPTG---------------EGT 367

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
              +Q  G   A+   K +F +    Y+HDTP    F +  R  + GCVR+   I L   
Sbjct: 368 SRLQQKAGPKAALGLVKFDFDNPYGVYLHDTPSRSKFESYSRLASHGCVRLEKPIPLAKQ 427

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           LL  +P W    +E  +   KT    LA  + V  +Y +A+   D  + FRDD YG D V
Sbjct: 428 LLASSPDWQPDVVEATIAAGKTVRAPLAQPIAVFLLYWTAYMTPDGQMNFRDDPYGWDKV 487

Query: 416 HVGII 420
            V  I
Sbjct: 488 LVQRI 492


>gi|90579750|ref|ZP_01235559.1| hypothetical amidase [Vibrio angustum S14]
 gi|90439324|gb|EAS64506.1| hypothetical amidase [Vibrio angustum S14]
          Length = 587

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 115/418 (27%), Positives = 196/418 (46%), Gaps = 21/418 (5%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
            F  Y+     +  + KPI+ S          ++   D +   LA+++    S I     
Sbjct: 168 AFQNYIATHRDVLFLSKPINMSKSMT-----KYADGVDVYPMTLAKLEQLRPSYI----- 217

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL-- 130
                T  AIA YQD+ +         +    G +  +   L + L   GD+D +     
Sbjct: 218 -AFKPTMDAIAKYQDLPAHTLTSSNFKQVYRKGATLPNGHELIKVLYTLGDMDQADYDRL 276

Query: 131 ----SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
               ++     V  ++K FQ RHGL   G++ ++T++ + +P D   R+L +N +R+  L
Sbjct: 277 SVVHNITNTGAVFESLKAFQKRHGLASDGIIGAATVQQLVMPYDDIARRLALNTLRVATL 336

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            +   G  ++ VNIP   LE  + G V   S VIVGR  R T +  S I  ++ NPYW +
Sbjct: 337 NKHAEGRPHIWVNIPNYKLEVFDKGNVVFESKVIVGRDSRPTNLFSSAITTMVVNPYWNV 396

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFI--FRQDP 302
           P +I Q D++  ++ +  YLK +N+ +++       +    +DW +  P  F   F+Q P
Sbjct: 397 PITIKQHDVIPKVKHNIDYLKQHNMQILNSWRDRTVISPSSIDWATVNPKTFPHEFQQGP 456

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    +    ++HDTP   LF+   R  +SGCVRV    DL  ++++    
Sbjct: 457 GPRNSLGRVKFLMPNDYAIFLHDTPSRGLFSKTKRDLSSGCVRVERAYDLANYVIEYQNR 516

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            +    ++++  +K   V L+  + V FVY++AW   D  +Q R+DIYG D+     I
Sbjct: 517 GNIPEFKQMLDAQKQKTVSLSKRIDVDFVYLTAWVDNDGKVQMREDIYGYDSPSANKI 574


>gi|70729780|ref|YP_259519.1| hypothetical protein PFL_2412 [Pseudomonas fluorescens Pf-5]
 gi|68344079|gb|AAY91685.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
          Length = 523

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 111/369 (30%), Positives = 174/369 (47%), Gaps = 11/369 (2%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQ 112
             +A +    +   P ++        +A A  +       W  +   PL         V 
Sbjct: 160 PGIAHIATAFEQARPSLA--QYRNLRQAYAHERQ-QPLPQWQAVAGGPLLRPDMQDKRVP 216

Query: 113 RLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
            L  RL   G L  P      A+   + SAVK FQ+ H L   G+V + TL+ MN+    
Sbjct: 217 ELALRLYHGGYLQSPVVNPDNAYSGELVSAVKNFQLGHSLQADGVVGAGTLKEMNISPAE 276

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R  QL++NL R++  L Q      VLVN+ AA L   ++  V  ++   VGR +RQTP+L
Sbjct: 277 RREQLRINLERLR-WLAQDYEPNLVLVNVAAAQLTFYQHDAVVWQTRTQVGRAERQTPLL 335

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
            S++ R+  NP W +P +I+++D +  +R+D  +L   N+ ++D  G+ +  E++DW+  
Sbjct: 336 KSQVTRLTLNPTWTVPPTILKEDKLPEIRRDQGFLNRQNLQVLDANGQPLAAEDIDWD-- 393

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
            P N + RQ  G  N +    I F +  + Y+HDTP   LF+   R  +SGCVRV   + 
Sbjct: 394 RPGNILLRQGAGPRNPLGRIAIRFPNPFSVYLHDTPSQALFSKGPRAFSSGCVRVEQALQ 453

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L  WLL       R    E++ T  T   +LA  VP+   Y +  +     + +  DIYG
Sbjct: 454 LRDWLLSPA---ERLRTNELLATGLTHEFRLAKPVPILLSYWTVQADSHGQLLYAPDIYG 510

Query: 412 LDNVHVGII 420
            D V    +
Sbjct: 511 HDQVLSTAL 519


>gi|330445897|ref|ZP_08309549.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328490088|dbj|GAA04046.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 586

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 193/418 (46%), Gaps = 21/418 (5%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
            F  Y+     +  + KP+  S +        ++   D +   LA+++      I     
Sbjct: 167 AFQNYIATHRNVLFLSKPLRMSKVMTD-----YASGVDAYPMTLAKLEALRPGYI----- 216

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
                T  A+A YQ++ +         R    G++      L + L   GD+D +    +
Sbjct: 217 -AFKPTMDAVAKYQNLPAHTLKASDFTRVYRKGDTLPHGHELVKVLYTLGDMDQAHYDHL 275

Query: 133 AF------DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           +          V  ++K FQ RHGL   G+V  +T++ + +P +   R+L +N +R+  L
Sbjct: 276 SHQAKITNTGAVFESLKTFQKRHGLSSDGIVGPATVQQLVMPYNEIARRLALNTLRVATL 335

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            +      ++ VNIP   LE  + G V   S VIVGR  R T +  S I  ++ NPYW +
Sbjct: 336 NKHSEDRPHIWVNIPNYKLEVYDKGNVVFESKVIVGRDSRPTNLFSSAITTMVVNPYWNV 395

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFI--FRQDP 302
           P +I Q D++  ++++  YLK +N+ +++       +    ++W++  P  F   F+Q P
Sbjct: 396 PITIKQHDVIPKVKRNIGYLKQHNMQILNSWRDRTVINPTSINWSTVNPKTFPHEFQQGP 455

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    +    ++HDTP   LF+   R  +SGCVRV    DL  +++     
Sbjct: 456 GPHNSLGRVKFLMPNDYAIFLHDTPARGLFSKTKRDLSSGCVRVERAYDLANYVIDYQNR 515

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            +     +++   K   V L+  + V FVY++AW  ++  +Q R+DIYG D+     I
Sbjct: 516 GNIPAFTKMLNAEKQKTVSLSKRIDVDFVYLTAWVDQNGKVQMREDIYGYDSPSANKI 573


>gi|320109078|ref|YP_004184668.1| ErfK/YbiS/YcfS/YnhG family protein [Terriglobus saanensis SP1PR4]
 gi|319927599|gb|ADV84674.1| ErfK/YbiS/YcfS/YnhG family protein [Terriglobus saanensis SP1PR4]
          Length = 569

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 101/382 (26%), Positives = 172/382 (45%), Gaps = 13/382 (3%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSVSV 111
            +   D+    +           T+ AI  Y  +L +     +P+   + +  G      
Sbjct: 180 LIDSTDVDDALNDAEPQSPEYRATKAAIVHYVGLLPQDHTSPVPMVTGKSIEPGKPWAGS 239

Query: 112 QRLRERLIISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           Q L  RL + GDLD  P    +  +D  +  A+K FQ RHG++  G +   T+ A+N P+
Sbjct: 240 QALSGRLALFGDLDNVPDTVSASTYDPQLTDALKKFQHRHGIEEDGKIGKDTVNALNTPL 299

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGR--VDR 226
            +RI QL   L R +  L  +     ++VN+P  +L A  +G        V+VG+   + 
Sbjct: 300 GVRINQLTDTLERWR-WLSDEYQNAAIMVNLPEYTLRAFSDGHHEEFSMRVVVGQSVKEH 358

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP++   +  ++F P+W +P SI++ ++   +R    YL  +N   +D KG  V     
Sbjct: 359 RTPVITDHMKYLVFRPFWNVPPSIMKAEIAPHMRASSGYLASHNFETVDNKGNPVSASA- 417

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                     I R+ PG  N++   K  F +  N Y+H TP   LF+   R  + GCVR+
Sbjct: 418 --EQVARAGVIVREKPGPKNSLGLVKFLFPNTFNVYLHSTPATELFSRSKRDFSHGCVRL 475

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRK-TTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           +    L  W+L+D   W+   I E ++  +    V L+  +P+   Y +A+  +D  + F
Sbjct: 476 QEPEKLAAWVLRDNSKWNDDSIHEAMENGQDNKTVLLSHPIPIVIFYATAYPGEDGDMHF 535

Query: 406 RDDIYGLDNVHVGIIPLPEDHP 427
             DIYG D      +     +P
Sbjct: 536 FTDIYGYDKELEDALHHGPPYP 557


>gi|119774749|ref|YP_927489.1| peptidoglycan binding domain-containing protein [Shewanella
           amazonensis SB2B]
 gi|119767249|gb|ABL99819.1| peptidoglycan-binding domain 1 [Shewanella amazonensis SB2B]
          Length = 472

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 111/377 (29%), Positives = 183/377 (48%), Gaps = 14/377 (3%)

Query: 38  EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL 97
           E +  ++H       ++ L  ++            +    T   +     +  +   P +
Sbjct: 96  ETVESAHHQNATQDLNSRLIALEP----------NDRFLNTMNRLRHLLWLAEQPWQPIV 145

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGM 156
               L  G+S   V  + +RL + GD++   G +   +D  V   VK FQ RHGL    +
Sbjct: 146 LNGLLRPGDSHTEVVAIAKRLWLLGDMETEPGYALSRYDDEVAQGVKAFQHRHGLKQDAV 205

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           +   TL  +N+  D R  +L  + + ++    Q +   YVLVNIPA  LE V++G+  + 
Sbjct: 206 IGPKTLYWLNLAPDTRAARLARDYL-LQSRERQTLPSTYVLVNIPAFDLELVDDGEALMH 264

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
           S VIVG+  R+TP + S I+ ++ NP W +PR +++ D++  +R+D  YL      +   
Sbjct: 265 SRVIVGKPSRKTPFIQSEISAVVVNPSWRVPRRLMRLDVLPKVRKDGSYLSRKGFIVWSR 324

Query: 277 KGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           +G+EV   +  + S     F +   Q PG  NA+   K+ F + +N Y+HDTP+  LF+ 
Sbjct: 325 EGEEVKETDDFFQSAAAGKFPYLLEQRPGPDNALGRFKLHFANEDNVYLHDTPDKHLFDE 384

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
            +R  +SGCVRV  I +L  WL        R   + +   + T    L   +PVHFVY +
Sbjct: 385 PMRALSSGCVRVEKINELSAWLANGRLADPRRWQQTLQTPQTTRWFTLKERLPVHFVYWT 444

Query: 395 AWSPKDSIIQFRDDIYG 411
           +W   +   QFR+DIYG
Sbjct: 445 SWVDAEGKAQFREDIYG 461


>gi|117920334|ref|YP_869526.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117612666|gb|ABK48120.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. ANA-3]
          Length = 558

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 125/480 (26%), Positives = 206/480 (42%), Gaps = 78/480 (16%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVND----------RFDNFLARVDMGIDS 65
           +   L + L+ V  P+ ++   ++I   + ++ N+          + DN+   +D   + 
Sbjct: 80  LGQTLLLSLADVS-PVFSANYQQLIQWQHRALNNEEQLKLRQMQLQLDNYWQYLDAQAEC 138

Query: 66  DIPIISKETIAQTEK------AIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERL 118
             P +S   I +          +     +     W  L +   L  G  S  +  + +RL
Sbjct: 139 TAPCLSAALIPKDTYFRAVVLKLKQLMALAESSSWETLILEDKLSPGQESPLIAPIAQRL 198

Query: 119 IISGDLDP-------------------------------------------------SKG 129
            + G L                                                   +  
Sbjct: 199 FLLGFLAEMPSTASESVADEAALPVSELGSEPTIEPDIISPDATTHAGTVARTEQASTDN 258

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            S+ +D  +  A+K FQ +HGL   G++   TL  +N     R + L  N +R ++L  +
Sbjct: 259 NSMPYDDELVRAIKNFQTQHGLQADGVIGKQTLYWLNQSPYARAKLLAKNTLR-QQLFTR 317

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +   Y+++NIPA  L+ VE GKV L S VIVG+  R TP+L S I+ ++ NP W +PR+
Sbjct: 318 TLPASYLVINIPAFELQFVEAGKVILNSKVIVGKASRPTPLLSSHISSVVLNPQWRVPRT 377

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINA 307
           I+++D+M  +RQD  YL+D    + D  G  V     +W      +F +R  Q PG  NA
Sbjct: 378 IVRRDIMPHIRQDGHYLQDRGFDVYDYDGARVEHSPQEWQELASSHFPYRLVQRPGAKNA 437

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTW 363
           +   K  F +  + Y+H T EP LF    R  +SGC+RV  + +L  W    L+KDT  W
Sbjct: 438 LGRYKFHFDNSFSVYLHGTSEPSLFKKTDRALSSGCIRVEKVEELARWFQTHLVKDTRLW 497

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
            +        T ++    L+  +PV+ VY +AW      IQ+R+DIY L+      +P  
Sbjct: 498 DKL----TPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRNDIYHLEVEFTQAVPAA 553


>gi|90579549|ref|ZP_01235358.1| hypothetical protein VAS14_01266 [Vibrio angustum S14]
 gi|90439123|gb|EAS64305.1| hypothetical protein VAS14_01266 [Vibrio angustum S14]
          Length = 579

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 115/423 (27%), Positives = 193/423 (45%), Gaps = 40/423 (9%)

Query: 6   KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS 65
           K N  L+      ILP+              D  + +   S    R   F+AR+      
Sbjct: 169 KGNLWLFGDIPPTILPLPS------------DGFLEKLLRSHEQQRLRYFIARLKPLDTE 216

Query: 66  DIPIISKETIAQTEKAIAFYQ-DILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGD 123
              +++           A Y+ +++    WP  L    +  G    +++ +   L   GD
Sbjct: 217 YTELVT-----------ALYKLNLIKDTRWPVFLFKGNIQPGQYVKNIEGVVTVLETLGD 265

Query: 124 LDPSKGLSVA------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           +   +  +            V  A+K FQ RHGL   G++   T + + + +  RIR L 
Sbjct: 266 MTALEAENARSQKIQNLSGSVLIAIKRFQERHGLKSDGVIGPQTQQWLALNIKERIRLLA 325

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +N  R++           ++VNIP+  +     G+  L S VIVGR  RQTP+++S I  
Sbjct: 326 LNAQRMRLW--SVKPDTGIVVNIPSYYMNLWLEGEKVLGSKVIVGRPSRQTPMIYSDIQS 383

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEPPN 295
           ++FNPYW +P SI++KD+M  +R++  YL ++N  +I     G+++ +  + ++   P  
Sbjct: 384 VVFNPYWNVPNSIMKKDIMPKVRRNRNYLANHNYEVIKGWDNGQKIAINSIPYHLLSPNR 443

Query: 296 FIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           F +  RQ PGK NA+   K  F +    Y+HDT    LF    R  +SGC+RV     L 
Sbjct: 444 FPYRLRQKPGKRNALGLYKFNFPNNQAIYLHDTASRSLFKKHERALSSGCIRVEQAKSLA 503

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKL--ATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
             LL+ + + S    + + ++RKT  + L  +  VPV  +Y +AW     ++ +R DIY 
Sbjct: 504 KVLLEYSGS-SVQRFDNLSRSRKTRTIVLGDSKSVPVDLIYQTAWVDDLGLVHYRSDIYE 562

Query: 412 LDN 414
            D 
Sbjct: 563 YDR 565


>gi|4378168|gb|AAD19413.1| unknown [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 473

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 110/409 (26%), Positives = 188/409 (45%), Gaps = 21/409 (5%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDE--IINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
            +   L    ++    + AS  D+   +    +    D F N +    +G  +       
Sbjct: 69  LISASLDYARAIHSGRLSASDFDKNWGMKPEPYDPWPD-FKNAVNNNTLGDWAANLPPPY 127

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
              A  +  + +Y+ I  +GGWP +P    L +G+ +  V+ LR R+ I  D +     S
Sbjct: 128 SGYAGLKNGLIYYRAIAEKGGWPVVPTGADLTVGSDNPRVKTLRRRIAIE-DKELPDNGS 186

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FDA +++AVK  Q R+GL+P+G+V   TL+A+N PV  RI Q+  N+ R +  L + +
Sbjct: 187 SHFDAALKAAVKRAQQRYGLNPTGVVSGQTLQALNQPVKSRIHQIMANMERWR-WLPRNL 245

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               + VN+ AA L   E  +  +    + GR   +TP+L S I  ++ NP W +P SI 
Sbjct: 246 PENRIQVNVAAAVLTLFEKNQPVMSMKSVTGRPGNETPMLRSTIYSLVINPPWNVPDSIA 305

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
           +K++    +  P YL+     +I E G+                   +Q PG  N++   
Sbjct: 306 KKELWPKEKAHPGYLQAAGFKIIGESGQGQ---------------RLQQKPGPRNSLGQL 350

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K +F +  + Y+HDTP    F+   R E+ GC+R+ + + L   LL   P W+   +   
Sbjct: 351 KFDFPNSYSVYLHDTPGRGAFSRYGRLESHGCIRLEHPVALGERLLAADPAWTGDRLRSE 410

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +   +T  V+L   V V   Y +A+   ++ + FR + Y  D +    I
Sbjct: 411 IDKNETERVRLKQPVAVFLFYWTAFGNGENALSFRSEPYKWDELLAQKI 459


>gi|254437318|ref|ZP_05050812.1| Putative peptidoglycan binding domain protein [Octadecabacter
           antarcticus 307]
 gi|198252764|gb|EDY77078.1| Putative peptidoglycan binding domain protein [Octadecabacter
           antarcticus 307]
          Length = 541

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 178/371 (47%), Gaps = 11/371 (2%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQR 113
           FL        + +P  S E      + +   + +L+ GGW P +    L  G S   V  
Sbjct: 165 FLGSTPASYLATLPPSSSEYARLLREKMTL-ERLLANGGWGPSVSSSSLAAGASGAGVVA 223

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           LR+RL+  G ++ S   +  +D  +++AV+ FQ  HGL   G   ++TL  +NVP   R+
Sbjct: 224 LRDRLVAMGHMERSA--TQTYDVTIQAAVQRFQQAHGLTADGDAGAATLAEINVPAASRL 281

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPIL 231
           +Q+ V + R +  + +  G R+V VN+   S   ++N  V  ++  ++G     RQTP  
Sbjct: 282 QQIIVAMERER-WMNRPRGERHVWVNLVDFSAAIMDNDSVTFQTRSVIGATGSGRQTPEF 340

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
              ++ ++ NP W +PRSII  + +  +++    +   +I + D  G+ V    V++++ 
Sbjct: 341 SDVMDHMVINPSWFVPRSIIVGEYLPAMQRSRDAIS--HILLTDGNGRTVNRGNVNFSNY 398

Query: 292 EPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
               F F  RQ P   NA+   K  F ++ N Y+HDTP   LF   +R  + GC+R+ + 
Sbjct: 399 TARTFPFSMRQPPSSRNALGLVKFMFPNQYNIYLHDTPAKSLFAREIRAYSHGCIRLNDP 458

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
            +    LL         + + ++ +   T V L   VPVH VY +A++     + FR DI
Sbjct: 459 FEFGHALLAAQEADPEGYFQRILNSGTETRVNLVDPVPVHIVYRTAFTHTTGQLNFRRDI 518

Query: 410 YGLDNVHVGII 420
           Y  D+     +
Sbjct: 519 YDRDSRIWNAL 529


>gi|262275620|ref|ZP_06053429.1| hypothetical protein VHA_002601 [Grimontia hollisae CIP 101886]
 gi|262219428|gb|EEY70744.1| hypothetical protein VHA_002601 [Grimontia hollisae CIP 101886]
          Length = 505

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 172/352 (48%), Gaps = 16/352 (4%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLS- 131
              +   AI   QD  S   W E     L  LG+       L   L   G L        
Sbjct: 144 QYRKMASAIVALQDNKSA-HWAEFTQGGLVRLGDRLEDPGSLITNLERQGALSAYDAQRL 202

Query: 132 -----VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                  ++A +  AVK FQ  HGL   G++ ++T   MN+    RI+ L +N+ R++  
Sbjct: 203 KRDQVNHYNATLVEAVKRFQENHGLKKDGVIGNNTRRWMNMSPSSRIQILALNMERLRLW 262

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             ++   + +LVNIP   +E   + K+ L S V+VGR  R+TP+  SR++ ++FNP W +
Sbjct: 263 PTER--EKIILVNIPNYEMEFWLDRKLILDSKVVVGRPSRRTPLFESRLDSVVFNPSWNV 320

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEPPNFIFR--QDP 302
           P  I+++D++  ++QD +YL  ++  ++     G  +  EE+DW +  P +F +R  Q P
Sbjct: 321 PVKIMREDILPKVQQDNEYLNKHSYTVLSSWVNGSVISAEEIDWETVSPNSFPYRLQQSP 380

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  NA+   K    + N  Y+HDTP   LFN   R  +SGC+RV+    L   LL     
Sbjct: 381 GSFNALGRYKFNTPNGNAIYLHDTPAKELFNKSRRAYSSGCIRVQKAEILAEILLN-KSG 439

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 E   +  +T  V L  ++ VH +Y +AW  ++  +QFR+D+Y  D 
Sbjct: 440 KRLGDYEYYQRIPETKWVSLRQKISVHTIYQTAWV-EEGKVQFREDVYRYDA 490


>gi|89074934|ref|ZP_01161384.1| hypothetical amidase [Photobacterium sp. SKA34]
 gi|89049331|gb|EAR54894.1| hypothetical amidase [Photobacterium sp. SKA34]
          Length = 587

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 195/418 (46%), Gaps = 21/418 (5%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
            F  Y+     +  + KPI  S          ++   D +   L++++      I     
Sbjct: 168 AFQNYIATHRDVLFLSKPIRMSKSMT-----KYANGVDAYPMTLSKLEQFRPGYI----- 217

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL-- 130
            +   T  AIA YQ++ +         +    G +  +   L + L   GD+D +     
Sbjct: 218 -SFLPTMDAIAKYQNLPAHTLVKSNFKQAYRKGATLPNGHELIKVLYTLGDMDQADYDRL 276

Query: 131 ----SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
               ++     V  ++K FQ RHGL   G++ ++T++ + +P     R+L +N +R+  L
Sbjct: 277 SVEPNITNTGAVFESLKTFQKRHGLANDGIIGAATVQQLVMPYGDIARRLALNKLRVATL 336

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            +   G  ++ VNIP   LE  + G V   S VIVGR +R T +  S I  ++ NPYW +
Sbjct: 337 NKHTEGRPHIWVNIPNYKLEVFDKGNVVFESKVIVGRDNRPTNLFSSAITTMVVNPYWNV 396

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFI--FRQDP 302
           P +I Q D++  ++ D  YLK +N+ +++       +    ++W +  P  F   F+Q P
Sbjct: 397 PITIKQHDVIPKVKHDIDYLKQHNMQILNSWRDRTVISPSSINWETVNPKTFPHEFQQGP 456

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    +    ++HDTP   LF+   R  +SGCVRV    DL  ++++    
Sbjct: 457 GPRNSLGRVKFLMPNDYAIFLHDTPSRGLFSKNKRDLSSGCVRVERAYDLANYVIEYQNR 516

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            +    ++++  +K   V L+  + V FVY++AW   D  +Q R+DIYG D+     I
Sbjct: 517 GNIPKFKQMLDAQKQKTVSLSKRIDVDFVYLTAWVDHDGNVQMREDIYGYDSPSANKI 574


>gi|197106129|ref|YP_002131506.1| peptidoglycan binding domain protein [Phenylobacterium zucineum
           HLK1]
 gi|196479549|gb|ACG79077.1| peptidoglycan binding domain protein [Phenylobacterium zucineum
           HLK1]
          Length = 510

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 109/366 (29%), Positives = 167/366 (45%), Gaps = 20/366 (5%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRE 116
           R+   +D   P  +        + +A Y++I + GGW  +P    + +G++   V  LR 
Sbjct: 154 RLKAWLDGLAPRYAG--YVALTRGLARYREIAAAGGWKTIPAGSSMAIGSTDPRVPALRA 211

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           RL    D   +   S  FD  ++ AV   Q R GL P G+V + TL  +N PV  RI Q+
Sbjct: 212 RLAAE-DPQLTDLTSPTFDPALQEAVVRAQKRFGLKPDGVVGNGTLAFLNQPVGQRILQI 270

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
             NL R +  L   M    V VN  AA +    + K  L    + G+   +TP+L S I+
Sbjct: 271 IANLERWR-WLPATMPATRVQVNSGAAIVTLFRDDKPVLSMKAVSGKPGDETPMLVSAIH 329

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
            ++ NP W +P  I  +++    R+DP Y   N+  ++  +G                  
Sbjct: 330 SVVINPPWNVPTRIANEELWPKQRRDPGYFARNDYVVLPTEG---------------GGS 374

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             +Q PG   A+   K +F +    Y+HDTP    F+   R  + GCVR+     L   L
Sbjct: 375 RVQQKPGPKAALGRFKFDFDNPFTVYLHDTPSKGTFDLYARQASHGCVRLEKAQLLAEAL 434

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           L   P W R  IE  + T KT  V L+ +VPV+ +Y +A++  D  + FR D Y  D + 
Sbjct: 435 LASDPKWGREGIEAQLATGKTLRVSLSEQVPVYILYWTAFAGADGQMHFRADPYNWDRLL 494

Query: 417 VGIIPL 422
           +  I L
Sbjct: 495 LTKIGL 500


>gi|89054636|ref|YP_510087.1| peptidoglycan binding domain-containing protein [Jannaschia sp.
           CCS1]
 gi|88864185|gb|ABD55062.1| Peptidoglycan-binding domain 1 [Jannaschia sp. CCS1]
          Length = 531

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 98/374 (26%), Positives = 178/374 (47%), Gaps = 15/374 (4%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVS 110
           F  F++       + +P    E   +  +A    + ++  GG+   +    L  G +  +
Sbjct: 156 FTEFVSANPYEYIATLPPQHPE-YTRLMRAKLHLERMIDEGGYGATVQAGSLTPGATGSA 214

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V +LR RL+  G LD S   +  +D  ++ AV  FQ+ +G++  G+    T+ A+N    
Sbjct: 215 VVQLRNRLMAMGYLDRSA--TATYDTRLQQAVMEFQVDNGINADGIAGGDTIRAVNRSAT 272

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR--QT 228
             + ++ + + R +  L    G R++ VN+P      +++G+V   +  ++G  DR  +T
Sbjct: 273 EHLSEVILAMERQR-WLNVDRGPRHIFVNLPDFHTRVIDDGEVTFITRSVIGSRDRDRRT 331

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P     +  ++ NP W +PRSI +  + +++     +L+      +   G+ V    VDW
Sbjct: 332 PEFSDEMEHMVINPSWYVPRSIARGYIPSIMAGGANHLQ------LMSNGRPVNRGAVDW 385

Query: 289 NSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           +     NF F  RQ PG  NA+   K  F ++ N Y+HD+P+  L  + VR  ++GCVR+
Sbjct: 386 SRVSAGNFPFDLRQPPGPRNALGLVKFMFPNQWNIYLHDSPDQHLMTHDVRAYSAGCVRL 445

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
            +  +L   LL             ++ + + T V L T +PVH VY ++W   +  + FR
Sbjct: 446 DDPFELAYHLLAAQEDDPVTFFNTILNSSRETQVNLQTPLPVHIVYWTSWVDTEGRLNFR 505

Query: 407 DDIYGLDNVHVGII 420
           +DIYG +      I
Sbjct: 506 NDIYGRNAELRQAI 519


>gi|119899290|ref|YP_934503.1| hypothetical protein azo3000 [Azoarcus sp. BH72]
 gi|119671703|emb|CAL95616.1| putative periplasmic protein [Azoarcus sp. BH72]
          Length = 543

 Score =  374 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 110/403 (27%), Positives = 179/403 (44%), Gaps = 25/403 (6%)

Query: 40  INESYHSIVNDRFDN--------FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
           ++ +Y     + FD            RV+    + +P +          A+A Y+ + + 
Sbjct: 126 VHAAYAGPAPEAFDADAYLRAALAEDRVEEAARAAVPPL--PLYGALRTALAHYRTLAAG 183

Query: 92  GG----W----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
                 W    P  P R L  G     +  L  RL + GDL     L   ++  +  AVK
Sbjct: 184 ADAQAAWSLPLPLPPRRKLEPGQPYAGLALLARRLTLLGDLVADVPLPPRYEGALVDAVK 243

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            FQ+RHGL   G+V   TL  + V    R+RQ+++ + R++         R ++VN+P  
Sbjct: 244 RFQLRHGLAADGVVGRGTLAELEVAPAARVRQIELTMERLR-WTPLLQAPRMIVVNVPEF 302

Query: 204 SLEAVE--NGK--VGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
            L A E  +G+  V  R  VIVG+  D +TP+    +  I F+PYW +P SI + +++  
Sbjct: 303 MLRAYEVRDGRIEVAARMKVIVGKALDTRTPLFAEDMRFIEFSPYWNVPPSIARAELVPR 362

Query: 259 LRQDPQYLKDNNIHMIDEKG-KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
           LR++P Y        +   G     +     ++        RQ PG  NA+   K  F +
Sbjct: 363 LRREPGYWNAQGFEFVAGDGTANPTLSTAGLDAVLRGTLRIRQRPGPHNALGDIKFVFPN 422

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
            +N Y+H TP P LF    R  + GC+RV   ++L  ++L+D P W    I E +    +
Sbjct: 423 NDNIYLHHTPTPQLFARDRRDFSHGCIRVEAPVELARFVLRDQPEWDEARIREAMSAGSS 482

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
             +++AT +PV   Y +A    +    F  DIYG D +    +
Sbjct: 483 KTIRVATPLPVLIAYGTAMVDAEGHAHFFRDIYGHDQLLHDTL 525


>gi|24373669|ref|NP_717712.1| hypothetical protein SO_2109 [Shewanella oneidensis MR-1]
 gi|24348019|gb|AAN55156.1|AE015652_5 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 502

 Score =  374 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 109/373 (29%), Positives = 186/373 (49%), Gaps = 24/373 (6%)

Query: 69  IISKETIAQTEKAIAFYQ--DILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD 125
           I ++++      ++  YQ   +     W  L +   L  G  S  +  +  RL+I G L 
Sbjct: 129 IFTQQSSYYHAVSLTLYQLMQLEDLTSWELLTLEEKLSPGQQSPLISPIARRLLILGFLP 188

Query: 126 PS----------KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                           + +   + +A+KLFQ +HGL   G++   TL  +N     R + 
Sbjct: 189 NELRMEPSVGVEANNGMLYGDELVTAIKLFQQQHGLLADGVIGKQTLFWLNQSPRARAKL 248

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L  N++R + +   ++  RY+LVNIPA  L+ +E+G+V LRS VIVG+  R TP+L S+I
Sbjct: 249 LARNVLR-QSIFTAQLPARYLLVNIPAFELKLIEDGQVALRSKVIVGKASRPTPLLASQI 307

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
           + ++ NP W +PR+II++D++  +RQD  YL +    +    G++      +W +    +
Sbjct: 308 SSVVMNPEWRVPRTIIKRDILPHIRQDGHYLTEREFDVYAYDGQQAEHSADEWQALASSH 367

Query: 296 FIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           F +   Q PG  NA+   K  F +  + Y+H T EP LF    R  +SGC+RV  + +L 
Sbjct: 368 FPYQLVQRPGPKNALGRYKFHFDNSFSVYLHGTSEPSLFKRTNRALSSGCIRVEKVEELA 427

Query: 354 VW----LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
           +W    L+KD   W + H +    T ++    L+ ++PV  VY + W      +Q+R+DI
Sbjct: 428 LWFKTHLVKDQRLWDKLHTD----TTQSQWFALSDKLPVFVVYWTVWLDDAGQVQYRNDI 483

Query: 410 YGLDNVHVGIIPL 422
           Y  ++     +  
Sbjct: 484 YQQESELSHAVSA 496


>gi|269102554|ref|ZP_06155251.1| hypothetical amidase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268162452|gb|EEZ40948.1| hypothetical amidase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 588

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 118/412 (28%), Positives = 189/412 (45%), Gaps = 21/412 (5%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
            F  Y+          KPI+ S        S +      F   LAR++    +++     
Sbjct: 168 AFEQYIKTHRNQLFTTKPINMSK-----EMSSYVSNEKAFPMTLARLEQQRPANV----- 217

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS----- 127
                T +AIA +Q +                G+     + +   L   GDLD +     
Sbjct: 218 -NFEATMQAIAKFQALEPNPLKASYLPAVYRKGDRIPHGKAVARVLYDLGDLDQANYDKL 276

Query: 128 -KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
               S++    +  A+K FQ R+GL   G++  ST + + +P     R+L +N+ R   +
Sbjct: 277 MAAKSISNTGVMNDAIKHFQKRYGLSADGIIGKSTAQQLAIPYGELARRLALNMQRANVI 336

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                   ++LVNIP   L+  ENGKV   S VIVGR  R T +  S IN ++ NPYW +
Sbjct: 337 APFAKDKAHILVNIPDYMLKVYENGKVVFDSKVIVGRESRPTNLFSSSINTMVVNPYWNV 396

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEPPNFI--FRQDP 302
           P +I QKD++   +++P YL  +NI +I+      E+ V  ++W++  P +F   F+Q P
Sbjct: 397 PITIKQKDVIPKAKRNPGYLAAHNIKVINSWRDRTEIPVSSINWSAVNPKSFPHEFQQGP 456

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    +    ++HDTP   LF+   R  +SGCVRV    DL  ++L     
Sbjct: 457 GPHNSLGMVKFLMPNDYAIFLHDTPARGLFSKTKRDLSSGCVRVARAHDLADFVLDYQNR 516

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            S    + + K +    V L+  + V FVY++ W  +D  +Q R+DIY  D 
Sbjct: 517 PSMRTFDSMRKDKGQDTVSLSRRIGVDFVYLTGWVNQDGQVQMREDIYNYDT 568


>gi|114047641|ref|YP_738191.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889083|gb|ABI43134.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-7]
          Length = 558

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 115/434 (26%), Positives = 183/434 (42%), Gaps = 67/434 (15%)

Query: 51  RFDNFLARVDMGIDSDIPIISKE------TIAQTEKAIAFYQDILSRGGWPELPIR-PLH 103
           + DN+   +D   +   P  S                +     +     W  L +   L 
Sbjct: 124 QLDNYWQYLDTQAECITPCRSAALMPTDAYFRAVVLKLKQLMALAESSSWETLILEDKLS 183

Query: 104 LGNSSVSVQRLRERLIISGDLD-------------------------------------- 125
            G  S  +  + +RL + G L                                       
Sbjct: 184 PGQESPLIAPIAQRLFLLGFLAEMPSTASESVVDKAALPVSELGSEPVIKSDIISPEATN 243

Query: 126 -----------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
                       +    + +D  +  A+K FQ +HGL   G++   TL  +N     R +
Sbjct: 244 QAETVARTEQAATDNNPMRYDDELVRAIKNFQTQHGLQADGVIGKQTLYWLNQSPYARAK 303

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
            L  N +R++    + +   Y+++NIPA  L+ VE GKV L S VIVG+  R TP+L S 
Sbjct: 304 LLAKNTLRLQIF-TRTLPASYLVINIPAFELQFVEAGKVILNSKVIVGKASRPTPLLSSH 362

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I+ ++ NP W +PR+I+++D++  +RQD  YL+D    + D  G  V     +W      
Sbjct: 363 ISSVVVNPQWRVPRTIVRRDILPHIRQDGHYLQDRGFDVYDYDGARVEHSPQEWQELASS 422

Query: 295 NFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
           +F +R  Q PG  NA+   K  F +  + Y+H T EP LF    R  +SGC+RV  + +L
Sbjct: 423 HFPYRLVQRPGAKNALGRYKFHFDNSFSVYLHGTSEPSLFKKTDRALSSGCIRVEKVEEL 482

Query: 353 DVW----LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
             W    L+KDT  W +        T ++    L+  +PV+ VY +AW      IQ+R+D
Sbjct: 483 ARWFQTHLVKDTRLWDKL----TPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRND 538

Query: 409 IYGLDNVHVGIIPL 422
           IY L+      +P 
Sbjct: 539 IYHLEAEFSQAVPA 552


>gi|260772914|ref|ZP_05881830.1| hypothetical protein VIB_001376 [Vibrio metschnikovii CIP 69.14]
 gi|260612053|gb|EEX37256.1| hypothetical protein VIB_001376 [Vibrio metschnikovii CIP 69.14]
          Length = 512

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 96/423 (22%), Positives = 185/423 (43%), Gaps = 22/423 (5%)

Query: 10  ILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPI 69
            +    +     +G     +      +D   N   + I+     +  +R+ + + +  P 
Sbjct: 98  WVKYDVLATDTVIGYLSYAQLAAQEGIDWFFNGKLNRILP--LPSASSRLALSVAAGTPA 155

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRPL---------HLGNSSVSVQRLRERLII 120
           ++   +    +  A++Q + + G    L   PL           G+       L +RL +
Sbjct: 156 MADLVLQHAPQDPAYHQLVYAYGFLSALKTTPLPVYRQAGLKRPGDKLDDRPTLIQRLAL 215

Query: 121 SG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
              D+   +     +D  +   +K FQ  HGL+  G++   TL+ +N+ V+ R+  + +N
Sbjct: 216 VNIDVTVIRDDVSWYDNSLIEPIKHFQQLHGLNADGVIGPQTLKWLNLSVEERLGLIALN 275

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R++           ++VN+P+  L+    G+   +S V+VGR+ R TP++ +R++ ++
Sbjct: 276 AERMRLWPTSNTS---IVVNVPSFELKYWHAGENVFQSKVVVGRISRPTPVMTTRLDSLI 332

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWNSPEPPNFI 297
            NP W IP  I+ +D++ + ++D +YL   N+ ++   G  + +    +DW +     F 
Sbjct: 333 VNPTWNIPYKIMVEDILPMAKRDLRYLDRQNLEILPRWGATQTLDPTSIDWENISLEAFP 392

Query: 298 F--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +  RQ  G  NA+   K    +R   ++HDTP   LF    R  +SGC+RV +       
Sbjct: 393 YRMRQRAGYHNALGLYKFNTPNRRAIFLHDTPSKYLFERDSRAFSSGCIRVEHADQFANM 452

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           LL      S+        +     + L   +PV  +Y +AW      + FR+DIY LD +
Sbjct: 453 LLTKQGLDSQQF--APQSSSVNQAIPLRQRIPVQIIYQTAWYDA-GQLHFREDIYRLDKL 509

Query: 416 HVG 418
              
Sbjct: 510 VTQ 512


>gi|146299527|ref|YP_001194118.1| peptidoglycan binding domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146153945|gb|ABQ04799.1| Peptidoglycan-binding domain 1 protein [Flavobacterium johnsoniae
           UW101]
          Length = 526

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 175/316 (55%), Gaps = 4/316 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ + L +++ ++  ++++L+   D+     L+  +D     AVK FQ RHGL   G++ 
Sbjct: 207 VKKITLKDTNNALINIKKKLLFWKDMSGKDSLTDKYDEKTFEAVKKFQARHGLADDGVIG 266

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             T+ A+N   + R +Q+  NL R +     ++   Y ++NIP  SL  VEN    L   
Sbjct: 267 IGTISALNYSKERRKQQIIANLERWR-WYPTELAENYFIINIPDYSLHVVENQDTTLVRN 325

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           ++VG   R+TPI+ S +  ++FNP W +P +I+++D++  ++++  YL   NI + D  G
Sbjct: 326 IVVGTSSRKTPIITSVLKTVVFNPTWTVPPTILKEDVVPAMKRNRNYLAKKNITIYDTSG 385

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           K V      WN  +P N+ + Q PG  N++   KI F + ++ Y+HDT     F    R 
Sbjct: 386 KVVEPSA--WNENKPNNYRYVQSPGYNNSLGLMKILFPNHHSVYLHDTNHRNYFVRNNRS 443

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVRV N ++L   +L D+  +S+  I+ ++ ++KT   K+  +  ++  Y +AWS 
Sbjct: 444 LSSGCVRVENPLELAEHILNDSIRFSKVKIDTIIASKKTMSFKITKKYALYQWYWTAWS- 502

Query: 399 KDSIIQFRDDIYGLDN 414
           K + + FR DIY LD+
Sbjct: 503 KKNQLIFRADIYNLDS 518


>gi|254291719|ref|ZP_04962506.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422403|gb|EDN14363.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 524

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 90/322 (27%), Positives = 166/322 (51%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL P G++   
Sbjct: 202 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKPIKQFQKMHGLQPDGVIGPQ 260

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 261 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFEAKVV 318

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++ +I      
Sbjct: 319 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDP 378

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + EP  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 379 EVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 438

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 439 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 492

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 493 Y-EEGVLHYRDDIYHYDALALG 513


>gi|153212308|ref|ZP_01948096.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124116686|gb|EAY35506.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 524

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 90/322 (27%), Positives = 166/322 (51%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL P G++   
Sbjct: 202 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKPIKQFQKMHGLQPDGVIGPQ 260

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 261 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFEAKVV 318

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++ +I      
Sbjct: 319 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDP 378

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + EP  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 379 EVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 438

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 439 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 492

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 493 Y-EEGVLHYRDDIYHYDALALG 513


>gi|15641281|ref|NP_230913.1| hypothetical protein VC1268 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|227081440|ref|YP_002809991.1| hypothetical protein VCM66_1223 [Vibrio cholerae M66-2]
 gi|229505145|ref|ZP_04394655.1| hypothetical protein VCF_000353 [Vibrio cholerae BX 330286]
 gi|229511183|ref|ZP_04400662.1| hypothetical protein VCE_002590 [Vibrio cholerae B33]
 gi|229518302|ref|ZP_04407746.1| hypothetical protein VCC_002326 [Vibrio cholerae RC9]
 gi|229608165|ref|YP_002878813.1| hypothetical protein VCD_003083 [Vibrio cholerae MJ-1236]
 gi|298498640|ref|ZP_07008447.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9655753|gb|AAF94427.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|227009328|gb|ACP05540.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|229345017|gb|EEO09991.1| hypothetical protein VCC_002326 [Vibrio cholerae RC9]
 gi|229351148|gb|EEO16089.1| hypothetical protein VCE_002590 [Vibrio cholerae B33]
 gi|229357368|gb|EEO22285.1| hypothetical protein VCF_000353 [Vibrio cholerae BX 330286]
 gi|229370820|gb|ACQ61243.1| hypothetical protein VCD_003083 [Vibrio cholerae MJ-1236]
 gi|297542973|gb|EFH79023.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 524

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 90/322 (27%), Positives = 165/322 (51%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL   G++   
Sbjct: 202 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQ 260

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    S V+
Sbjct: 261 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFESKVV 318

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++ +I      
Sbjct: 319 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDP 378

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + EP  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 379 EVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 438

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 439 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 492

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 493 Y-EEGVLHYRDDIYHYDALALG 513


>gi|254848392|ref|ZP_05237742.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255745664|ref|ZP_05419612.1| L,D-transpeptidase YcbB [Vibrio cholera CIRS 101]
 gi|262159059|ref|ZP_06030171.1| L,D-transpeptidase YcbB [Vibrio cholerae INDRE 91/1]
 gi|254844097|gb|EET22511.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255736739|gb|EET92136.1| L,D-transpeptidase YcbB [Vibrio cholera CIRS 101]
 gi|262029244|gb|EEY47896.1| L,D-transpeptidase YcbB [Vibrio cholerae INDRE 91/1]
          Length = 523

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 90/322 (27%), Positives = 165/322 (51%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL   G++   
Sbjct: 201 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQ 259

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    S V+
Sbjct: 260 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFESKVV 317

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++ +I      
Sbjct: 318 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDP 377

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + EP  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 378 EVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 437

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 438 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 491

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 492 Y-EEGVLHYRDDIYHYDALALG 512


>gi|121729970|ref|ZP_01682389.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147674156|ref|YP_001216833.1| hypothetical protein VC0395_A0887 [Vibrio cholerae O395]
 gi|121628291|gb|EAX60802.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|146316039|gb|ABQ20578.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227013185|gb|ACP09395.1| conserved hypothetical protein [Vibrio cholerae O395]
          Length = 524

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 89/322 (27%), Positives = 166/322 (51%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL P G++   
Sbjct: 202 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKPIKQFQKMHGLQPDGVIGPQ 260

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 261 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFEAKVV 318

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++ +I      
Sbjct: 319 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDP 378

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + +P  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 379 EVIDPALIDWETVDPATFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 438

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 439 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 492

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 493 Y-EEGVLHYRDDIYHYDALALG 513


>gi|153801328|ref|ZP_01955914.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229529651|ref|ZP_04419041.1| hypothetical protein VCG_002746 [Vibrio cholerae 12129(1)]
 gi|124123153|gb|EAY41896.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229333425|gb|EEN98911.1| hypothetical protein VCG_002746 [Vibrio cholerae 12129(1)]
          Length = 524

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 90/322 (27%), Positives = 166/322 (51%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL P G++   
Sbjct: 202 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKLIKQFQKMHGLQPDGVIGPQ 260

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 261 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFEAKVV 318

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++ +I      
Sbjct: 319 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDP 378

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + EP  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 379 EVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 438

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 439 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 492

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 493 Y-EEGVLHYRDDIYHYDALALG 513


>gi|312961568|ref|ZP_07776069.1| hypothetical protein PFWH6_3485 [Pseudomonas fluorescens WH6]
 gi|311284247|gb|EFQ62827.1| hypothetical protein PFWH6_3485 [Pseudomonas fluorescens WH6]
          Length = 533

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 109/368 (29%), Positives = 174/368 (47%), Gaps = 11/368 (2%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQR 113
            L  +    D   P  S +         +  +       W  +   PL   G     V  
Sbjct: 171 GLQDMAQAFDQARP--SADLYRSLRNVYSSMRQ-QPLPHWDPVGSGPLLRPGMEDPRVPE 227

Query: 114 LRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           L  RL   G L   + G    +   + SAVK FQ+ H L   G++ + T+  +N+   +R
Sbjct: 228 LARRLHSGGYLPAERQGNGKQYSPELVSAVKAFQLSHSLQSDGVIGAGTVAELNISPAMR 287

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
             QL++NL R +  L + +    VLVN+ AA L   ++G    ++ + VGR +RQTP+L 
Sbjct: 288 REQLRINLERFR-WLAKDLEPEGVLVNVAAAQLSVYQSGIPVWQTRLQVGRAERQTPLLK 346

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           SRI R+  NP W IP +I+++D +  +R +P+YL+  N+ ++D +G  +  E +DW    
Sbjct: 347 SRITRLTLNPTWTIPPTIMREDKLPAIRLNPEYLRQQNLQVLDAEGHALAPELIDWA--R 404

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
           P N + RQ+ G  N +    + F +  + Y+HDTP   LF    R  +SGCVRV   + L
Sbjct: 405 PGNILLRQEAGPRNPLGKIVMRFPNPYSVYLHDTPSQPLFTKGPRAFSSGCVRVEQPLLL 464

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              L+       R   +E++ T  T   +LAT VPV   Y +    +   + +  DIY  
Sbjct: 465 RDLLVSPA---ERARTDELLATGVTHEFRLATPVPVLLGYWTVEVDRQGGLVYAPDIYAR 521

Query: 413 DNVHVGII 420
           D V +  +
Sbjct: 522 DLVLMKAM 529


>gi|262169418|ref|ZP_06037110.1| L,D-transpeptidase YcbB [Vibrio cholerae RC27]
 gi|262022231|gb|EEY40940.1| L,D-transpeptidase YcbB [Vibrio cholerae RC27]
          Length = 523

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 89/322 (27%), Positives = 166/322 (51%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL P G++   
Sbjct: 201 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKPIKQFQKMHGLQPDGVIGPQ 259

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 260 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFEAKVV 317

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++ +I      
Sbjct: 318 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDP 377

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + +P  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 378 EVIDPALIDWETVDPATFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 437

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 438 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 491

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 492 Y-EEGVLHYRDDIYHYDALALG 512


>gi|153823871|ref|ZP_01976538.1| putative peptidoglycan binding domain protein [Vibrio cholerae B33]
 gi|126518613|gb|EAZ75836.1| putative peptidoglycan binding domain protein [Vibrio cholerae B33]
          Length = 519

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 90/322 (27%), Positives = 165/322 (51%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL   G++   
Sbjct: 201 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQ 259

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    S V+
Sbjct: 260 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFESKVV 317

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++ +I      
Sbjct: 318 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDP 377

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + EP  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 378 EVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 437

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 438 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 491

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 492 Y-EEGVLHYRDDIYHYDALALG 512


>gi|153827569|ref|ZP_01980236.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149738468|gb|EDM52864.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 524

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 90/322 (27%), Positives = 166/322 (51%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL P G++   
Sbjct: 202 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKLIKQFQKMHGLQPDGVIGPQ 260

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 261 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFEAKVV 318

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++ +I      
Sbjct: 319 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDP 378

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + EP  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 379 EVIDPALIDWETVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 438

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 439 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 492

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 493 Y-EEGVLHYRDDIYHYDALALG 513


>gi|114562617|ref|YP_750130.1| peptidoglycan binding domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114333910|gb|ABI71292.1| Peptidoglycan-binding domain 1 protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 473

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 108/397 (27%), Positives = 180/397 (45%), Gaps = 4/397 (1%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           IL MG +  +     ++   +    ++  V+  FD+      +   +     S +     
Sbjct: 58  ILQMGSAAEQLEYIDNIQQSVAAFWHNKQVSLPFDSMDNTTSLRDKNIALEPSVDDYLGV 117

Query: 79  EKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
              +     +     WP + +   L  G+   S++++ +RL + GD        + +   
Sbjct: 118 INDLRKLMWLSQTQDWPAITLEGLLRPGDRHPSIKQINQRLWLLGDAYEYLEDEIDYQPA 177

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  +VK FQ RHGL    ++   TL  +N     R   L  + +     L Q +   Y+L
Sbjct: 178 LVQSVKRFQSRHGLKTDAVIGPKTLFWLNQTPQQRASLLAKSFVEKTVYLSQ-LPQPYLL 236

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           +NIPA  +  V+  +V L S VIVG+  RQTP++  +I+ I+ NP W +PR +++KD++ 
Sbjct: 237 INIPAFQMVLVDQNQVVLASKVIVGKSYRQTPVMTGQISNIVINPTWTVPRQLLRKDILP 296

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEF 315
            +R +  Y  D +  + D +G  V      W       F +R  Q PG  NA+   K  F
Sbjct: 297 QVRSNGAYFADRHFDVFDYEGHRVDKTPQQWQQAATGKFPYRVVQRPGSGNALGRYKFHF 356

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +  + Y+HDTP P +F +V R  +SGCVR+  +  L  W         R          
Sbjct: 357 NNDQSVYLHDTPTPEMFAHVERDISSGCVRIEKVQQLADWFANHLVIDKRTWAHLQSNHT 416

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
           +T    L++ +PVH VY  AW  +  + Q+RDDIY L
Sbjct: 417 QTQWFALSSSLPVHMVYWRAWVDEQHVAQYRDDIYQL 453


>gi|113970169|ref|YP_733962.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-4]
 gi|113884853|gb|ABI38905.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-4]
          Length = 542

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 186/418 (44%), Gaps = 51/418 (12%)

Query: 51  RFDNFLARVDMGIDSDIPIISKE------TIAQTEKAIAFYQDILSRGGWPELPIR-PLH 103
           + DN+   +D   +   P  S                +     +     W  L +   L 
Sbjct: 124 QLDNYWRYLDTQAECITPCRSAALMPTDAYFRAVVLKLKQLMALAESSSWETLILEDKLS 183

Query: 104 LGNSSVSVQRLRERLIISGDLD---------------------------------PSKGL 130
            G  S  +  + +RL + G L                                   +   
Sbjct: 184 PGQESPLIALIVQRLFLLGFLADKPSPVSETAADPEALSPDVTTHPESKAYPAQGSADKN 243

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
            + ++  + +A+K+FQ +HGL   G++   TL  +N     R + L  N +R +++  + 
Sbjct: 244 PMLYNDELVAAIKVFQTQHGLQADGVIGKQTLYWLNQSPYARAQLLAKNTLR-QQIFTRT 302

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +   Y+++N+PA  L+ VE GKV L S VIVG+  R TP+L S I+ ++ NP W +PR+I
Sbjct: 303 LPASYLVINVPAFELQFVEAGKVILNSKVIVGKASRPTPLLSSHISSVVVNPQWRVPRTI 362

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAM 308
           +++D++  +RQD  YL+D    + D  G  V     +W      +F +R  Q PG  NA+
Sbjct: 363 VRRDILPHIRQDGHYLQDRGFDVYDYDGARVEHSPQEWQELASSHFPYRLVQRPGAKNAL 422

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWS 364
              K  F +  + Y+H T EP LF    R  +SGC+RV  + +L  W    L+KDT  W 
Sbjct: 423 GRYKFHFDNSFSVYLHGTSEPSLFKKTDRALSSGCIRVEKVEELARWFQTHLVKDTRLWD 482

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +        T ++    L+  +PV+ VY +AW      IQ+R+DIY L+      +P 
Sbjct: 483 KL----TPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRNDIYHLEAEFTQAVPA 536


>gi|170726506|ref|YP_001760532.1| peptidoglycan-binding domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169811853|gb|ACA86437.1| Peptidoglycan-binding domain 1 protein [Shewanella woodyi ATCC
           51908]
          Length = 461

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 180/381 (47%), Gaps = 6/381 (1%)

Query: 38  EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL 97
           E+ N      +  R +     +   + S  P  S          I +   +     W  L
Sbjct: 76  EVANFWRSVKIQSRGEGGSDDLYRNVISLEP--SSSDYLPISNRIRYLLWVEQTESWQPL 133

Query: 98  PIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            +   L  G+ + +V+ +  RL   GDL+     +    + +   V  FQ RHGL   G+
Sbjct: 134 VLDIWLKEGDINPAVKVISRRLNWLGDLNFLDPDNSVMTSELVRGVLNFQRRHGLKQDGV 193

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           +   TL  +N+    R   L  N +     L   +G R++LVNIPA  +  V+ G+V L 
Sbjct: 194 IGPETLRWINLTPKKRAALLAENFISKSSYLS-TIGPRFLLVNIPAFEMVLVDKGQVQLE 252

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
           S VIVG+  RQTP L S I+ ++ NP W +PR+++++D++  +R+D  Y+ ++N  + + 
Sbjct: 253 SRVIVGKPYRQTPRLSSYISNMVLNPSWRVPRTLLRRDLLPKVRKDGAYISEHNFDVFNS 312

Query: 277 KGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
            G E+     +W +     F +R  Q PGK N +   K  F +  N Y+HDT +  LF  
Sbjct: 313 AGDEIVKSPEEWQTLAGGRFPYRLVQKPGKDNTLGRYKFYFKNEYNVYLHDTYDKALFEE 372

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
             R  +SGC+RV  +  L  WL  +  +  +  ++   +  KT        + VH VY +
Sbjct: 373 SNRALSSGCIRVEKVESLANWLASNLVSDKQTWVDLQTERDKTQWFAFDNFLAVHLVYWT 432

Query: 395 AWSPKDSIIQFRDDIYGLDNV 415
           AW  +  + QFR+DIY  +++
Sbjct: 433 AWVDESGLAQFRNDIYHQNSM 453


>gi|197334392|ref|YP_002155958.1| cell wall degradation protein [Vibrio fischeri MJ11]
 gi|197315882|gb|ACH65329.1| cell wall degradation protein [Vibrio fischeri MJ11]
          Length = 512

 Score =  371 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 179/354 (50%), Gaps = 14/354 (3%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           S +   +  + ++ Y           +  R +   N    V  +  RL +SG+++  +  
Sbjct: 157 SSDQYEELYRRLSHYYQPYEDSESVFIKERLIRP-NQFTDVNAIIYRLQVSGEINHQEAE 215

Query: 131 ------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
                 +  +D+ +   +K FQ RHGL   G++   TL  +N+    R+R + +N+ R++
Sbjct: 216 MLLRQSNGHYDSSLVLIIKEFQKRHGLKQDGIIGPKTLHWLNMTAKERVRIMALNIQRLR 275

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
               +     +VLVNIP+  +   + G++   S VIVG+ +R+TPI  +R+N I+FNP W
Sbjct: 276 LW--ENKNSHFVLVNIPSYEMAYWQEGELVFTSKVIVGKPERRTPIFTTRLNAIVFNPEW 333

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEPPNFIF--RQ 300
            +P  I+++D++     +  +L+  N  +I      + + ++++DW       F +  +Q
Sbjct: 334 KVPTKIMREDILPKALSNKDFLQSQNFEIIPTWLSKEVISIDDIDWEQVNVETFPYKLKQ 393

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
             G  NA+   K    +RN  Y+HDTP   LF+   R  +SGC+RV    +    L+K++
Sbjct: 394 KSGNTNALGRYKFNTPNRNAIYLHDTPSRSLFSKQHRAYSSGCIRVEKASEFAQLLMKES 453

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             +S    ++  +  +T+ V L  ++ V+ +Y ++W  +D+ +QFR+DIY  D 
Sbjct: 454 -HFSTQDYKDYHELPETSKVTLDQKISVYTIYQTSWVGEDNQVQFRNDIYKYDE 506


>gi|229521381|ref|ZP_04410800.1| hypothetical protein VIF_001911 [Vibrio cholerae TM 11079-80]
 gi|229341479|gb|EEO06482.1| hypothetical protein VIF_001911 [Vibrio cholerae TM 11079-80]
          Length = 524

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 89/322 (27%), Positives = 165/322 (51%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL P G++   
Sbjct: 202 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKPIKQFQKMHGLQPDGVIGPQ 260

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 261 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFEAKVV 318

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++ + +I      
Sbjct: 319 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHRMEIIRGWSDP 378

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + +P  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 379 EVIDPALIDWETVDPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 438

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 439 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 492

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 493 Y-EEGVLHYRDDIYHYDALALG 513


>gi|91975886|ref|YP_568545.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris BisB5]
 gi|91682342|gb|ABE38644.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris BisB5]
          Length = 716

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 111/429 (25%), Positives = 175/429 (40%), Gaps = 43/429 (10%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLA---RVDMGIDSDIPIIS 71
               ++          +H S     I    H I        +         +DS  P   
Sbjct: 241 LTESMMDYARQAQSGRMHWSQAGSDIQYPEHPIDPAEVLANVTTAKDASAALDSYNPPHK 300

Query: 72  KETIAQTEKAIAFYQ--------DILSRGGWPELPIRPLHL--GNSSVSVQRLRERLIIS 121
                + +K +A  +         I        +P R            V +LR +L I+
Sbjct: 301 P--YRELKKKLAELRGESGMPVLKIAEGETLKFVPARKKQPAVTMDDPRVPQLRAKLGIT 358

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNL 180
            D D     S  +DA V  AV+ FQ    L P+G++D  T++ +N P   R I  + VN+
Sbjct: 359 EDAD-----SSTYDAKVAEAVRKFQRSADLKPTGVLDDRTVKVLNTPKRDRSIDTIIVNM 413

Query: 181 MRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-DRQTPILHSRI 235
            R + L  Q     +G  YV++NIP  +L+ ++NG     + V+ G+     TP+L   +
Sbjct: 414 ERWRWLPRQLGAASIGNAYVILNIPDYTLKVMQNGAQVWTTRVVTGKPGKHATPLLTETM 473

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
             I  NP W +P SII  + +  L QDP  L    + M   +   + +            
Sbjct: 474 KYITVNPTWNVPPSIINNEYLPALAQDPTVLDRMGLKMSRNRDGSIHIS----------- 522

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
               Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       
Sbjct: 523 ----QPPGEANALGRVRFNFPNKFLVYQHDTPDKNLFARDERAFSHGCMRVQNPDQYAAA 578

Query: 356 LLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           LL  T    RY  E++  +  R    +K  T +PV+  Y +A+   D  +Q R DIYG D
Sbjct: 579 LLNITMPNERYTPEKIRSMYGRSEIDLKFPTPIPVNITYQTAFVDDDGKLQIRKDIYGRD 638

Query: 414 NVHVGIIPL 422
           +  + I+  
Sbjct: 639 SAMLAILRN 647


>gi|89073969|ref|ZP_01160475.1| hypothetical protein SKA34_15405 [Photobacterium sp. SKA34]
 gi|89050297|gb|EAR55801.1| hypothetical protein SKA34_15405 [Photobacterium sp. SKA34]
          Length = 579

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 115/422 (27%), Positives = 188/422 (44%), Gaps = 38/422 (9%)

Query: 6   KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS 65
           K N  L+      ILP+              D  I E   S    R   F+AR+    + 
Sbjct: 169 KGNLWLFGDIPPTILPLPS------------DRFIEELLTSHEQQRLRFFIARLKPLDNE 216

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDL 124
              +++         A+    +I     WP    + +   G    +++ +   L   GD+
Sbjct: 217 YTELVT---------ALNKLNEIRDT-RWPVFLFKGIIQPGKYVKNIEGVVTVLETLGDM 266

Query: 125 DPSKGLS------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
              +  +            V  AVK FQ RHGL   G++ + T + + + +  RIR L +
Sbjct: 267 TTLEAENVRSQKIQYLSGSVLIAVKRFQERHGLKNDGVIGTQTQQWLALNIKERIRLLAL 326

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           N  R++           ++VNIP+  +     G+  L S VIVGR  R TP++ S I  +
Sbjct: 327 NAQRMRLW--SVKPDTGIVVNIPSFYMNLWLEGEKVLGSKVIVGRPSRHTPMIDSDIQSV 384

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEPPNF 296
           +FNPYW +P SI++KD+M  +R++  YL ++N  +I       ++ +  + ++   P  F
Sbjct: 385 VFNPYWNVPNSIMKKDIMPKVRRNRNYLANHNYEVIKGWDNAQKIAINSIPYHLLSPNRF 444

Query: 297 IF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
            +  RQ PGK NA+   K  F +    Y+HDT    LF    R  +SGC+RV     L  
Sbjct: 445 PYRLRQKPGKRNALGLYKFNFPNNQAIYLHDTASRSLFKKNERALSSGCIRVEQAKSLAR 504

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKL--ATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
            LL+ + + S    + + ++RKT  + L     VPV  +Y +AW     ++ +R DIY  
Sbjct: 505 VLLEYSGS-SEQRFDSLSRSRKTRTIVLGDNKSVPVDLIYQTAWVDDSGLVHYRSDIYQY 563

Query: 413 DN 414
           D 
Sbjct: 564 DR 565


>gi|153829587|ref|ZP_01982254.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|229515643|ref|ZP_04405102.1| hypothetical protein VCB_003301 [Vibrio cholerae TMA 21]
 gi|148874921|gb|EDL73056.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|229347412|gb|EEO12372.1| hypothetical protein VCB_003301 [Vibrio cholerae TMA 21]
          Length = 524

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 89/322 (27%), Positives = 164/322 (50%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +D  +E  +K FQ  HGL P G++   
Sbjct: 202 RPGDPLSHREALVQRLALV-NLDTTSILNNVAYYDTSLEKPIKQFQKMHGLQPDGVIGPQ 260

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 261 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFEAKVV 318

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++ + +I      
Sbjct: 319 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHRMEIIRGWSDP 378

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + EP  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 379 EVIDPALIDWETVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 438

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 439 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 492

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 493 Y-EEGVLHYRDDIYHYDALALG 513


>gi|85716085|ref|ZP_01047061.1| hypothetical protein NB311A_10915 [Nitrobacter sp. Nb-311A]
 gi|85697084|gb|EAQ34966.1| hypothetical protein NB311A_10915 [Nitrobacter sp. Nb-311A]
          Length = 783

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 102/425 (24%), Positives = 176/425 (41%), Gaps = 41/425 (9%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARV---DMGIDSDIPIIS 71
               ++          +H S +   +    H I  ++    +         +DS  P   
Sbjct: 312 LTASMMDYARQAQSGRMHWSQVTADVQYPEHPIDPEQVLTNVTTAKDSSAALDSYNPP-- 369

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRP---LHLG--NSSVSVQRLRERLIISGDLDP 126
            E   + ++ +A  +   S G   E+   P              V ++R RL ++     
Sbjct: 370 HELYRELKQKLAELRK-ASEGPLIEIANGPGLVFRKNAVMEDPRVPQIRARLGMT----- 423

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIKK 185
                  FDA V +AV+ FQ RH L P G++ ++T+ A+N P     I  + VN+ R + 
Sbjct: 424 QNPDDTRFDADVAAAVREFQARHHLKPDGILGNNTVRALNGPKKDHTIDTIIVNMERWRW 483

Query: 186 LL----EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMF 240
           L        +   Y ++NIP  SL+ +++G     + V+VG+     TP+L   +  I  
Sbjct: 484 LPRELGAPSLDDAYAILNIPDYSLKVMQHGAQIWSTRVVVGKPGLHATPLLTETMKYITV 543

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +P SII K+ +  L+QDP  L    + +  ++   + +                Q
Sbjct: 544 NPTWNVPPSIIYKEYLPALQQDPTVLSRMGLKLERDRNGGIHIS---------------Q 588

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK-- 358
            PG+ NA+   +  F ++   Y HDTP+  LF+   R  + GC+RV+N       LL   
Sbjct: 589 PPGERNALGRIRFNFPNKFLVYQHDTPDKHLFSKNKRAFSHGCMRVQNPDQYAATLLNIV 648

Query: 359 -DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
                ++   I   +  R    +   T VPVH  Y +A+  +   +Q R D+YG D   +
Sbjct: 649 LPQEHYTPEKI-RSMYGRNEFNINFPTPVPVHITYQTAFVDQAGKLQLRADVYGRDAKML 707

Query: 418 GIIPL 422
            ++  
Sbjct: 708 ALLRN 712


>gi|262402380|ref|ZP_06078941.1| hypothetical protein VOA_000347 [Vibrio sp. RC586]
 gi|262351162|gb|EEZ00295.1| hypothetical protein VOA_000347 [Vibrio sp. RC586]
          Length = 522

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 103/399 (25%), Positives = 185/399 (46%), Gaps = 28/399 (7%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFL-ARVDMGIDSDIPIISKETIAQTE-KAIAF 84
           + KP+ A   +E     + +I N   D  +        D    + + +++  TE + I  
Sbjct: 134 LNKPLAA-PSEEAQLALHMAIGNQTLDQLIDEYTPRDPDYQQLLHTYQSLLATESQDIPL 192

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVK 143
           Y+                 LG+       L  RL +   D+   +     +D  + + +K
Sbjct: 193 YEQ-----------TGLKRLGDPLTHRDALVHRLSLVNIDITEVRDDITFYDQALVNPIK 241

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            FQ  HGL P G+V   T++ +N  +  R+  L +N  R++     +     ++VN+P  
Sbjct: 242 QFQSMHGLKPDGVVGPETMKWLNKSMAERVSLLALNAERLRLWPAPQ--DTAIVVNVPGF 299

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
           +++  + G+    + V+VGRV R TP+++++++ ++ NP W +PR I+ +D++ ++++D 
Sbjct: 300 AMKYWDAGQEVFEAKVVVGRVTRPTPVMNTKLDSLIINPTWNVPRKIMVEDILPMVKRDH 359

Query: 264 QYLKDNNIHMIDEKG--KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRN 319
           +YL  + + +I      + V  + +DW S +P  F +  RQ  G  NA+   K    +  
Sbjct: 360 EYLAKHQMEIIRGWNDPEVVDPQLIDWASVDPETFPYRMRQQAGVQNALGMYKFNTPNSR 419

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             Y+HDTP   LFNN  R  +SGC+RV N       LL+          E      KT  
Sbjct: 420 AIYLHDTPSKHLFNNAARAFSSGCIRVENAQKFAQTLLEQQGIVLNELPE------KTKT 473

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           + L   +PVH +Y + W  +   +Q+RDDIY  D   + 
Sbjct: 474 IALKKRIPVHIIYQTVWY-EGGKLQYRDDIYRYDTSALS 511


>gi|229525867|ref|ZP_04415272.1| hypothetical protein VCA_003512 [Vibrio cholerae bv. albensis
           VL426]
 gi|229339448|gb|EEO04465.1| hypothetical protein VCA_003512 [Vibrio cholerae bv. albensis
           VL426]
          Length = 524

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 89/322 (27%), Positives = 164/322 (50%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL   G++   
Sbjct: 202 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQ 260

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 261 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFEAKVV 318

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++ + +I      
Sbjct: 319 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHRMEIIRGWSDP 378

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + EP  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 379 EVIDPALIDWETVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 438

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 439 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 492

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 493 Y-EEGVLHYRDDIYHYDALALG 513


>gi|297578860|ref|ZP_06940788.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297536454|gb|EFH75287.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 524

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 90/322 (27%), Positives = 165/322 (51%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL P G++   
Sbjct: 202 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKPIKQFQKMHGLQPDGVIGPQ 260

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 261 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFEAKVM 318

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++ + +I      
Sbjct: 319 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHRMEIIRGWSDP 378

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + EP  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 379 EVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 438

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 439 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 492

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 493 Y-EEGVLHYRDDIYHYDALALG 513


>gi|91792858|ref|YP_562509.1| peptidoglycan binding domain-containing protein [Shewanella
           denitrificans OS217]
 gi|91714860|gb|ABE54786.1| Peptidoglycan-binding domain 1 [Shewanella denitrificans OS217]
          Length = 498

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 108/363 (29%), Positives = 169/363 (46%), Gaps = 6/363 (1%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSV 111
           D F    D      I   S   +A     +     +     WP + P   L   +   S+
Sbjct: 128 DEFNPLSDRQKSLAIEPKSNMYLAVMNH-VRRMLWLDENADWPVIDPQGLLRRNDGHASI 186

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             +  RL + GD              +ES +K FQ RHGL   G++   TL  +N     
Sbjct: 187 PAIAARLSLLGDFH-GAHQGYVLTPALESGLKAFQRRHGLKDDGVIGPKTLSWLNQLPIE 245

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R R L VN +   +   Q +   Y+LVNIPA  +  V+ G++ L S VIVG+  RQTPI+
Sbjct: 246 RARLLAVNFVEQSRYQAQ-LDDSYLLVNIPAFEMVLVDKGQIVLHSRVIVGKSYRQTPIM 304

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
              I+ ++ NP W +PR ++++D++  +R+D +YL +    + + +G++  +   +W S 
Sbjct: 305 SGAISNLVINPTWTVPRRLLRQDVLPHVRKDGRYLAEKQFDVFNYQGQKQLLTAEEWQSL 364

Query: 292 EPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
               F ++  Q PG+ N++   K  F +  N Y+HDTP P LF N  R  +SGC+R+  +
Sbjct: 365 AYTRFPYKLVQRPGEHNSLGRYKFHFNNDKNIYLHDTPTPELFANAERALSSGCIRIEKV 424

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
            +L  W         R          KT    L   +PVH VY +AW  +  + Q+R DI
Sbjct: 425 AELANWFAVHRVNDKRTWRRLQSSKHKTQWFSLTHSLPVHLVYWTAWVDEHHLAQYRSDI 484

Query: 410 YGL 412
           Y  
Sbjct: 485 YHR 487


>gi|254226414|ref|ZP_04920001.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621036|gb|EAZ49383.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 524

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 88/322 (27%), Positives = 164/322 (50%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +D  +E  +K FQ  HGL P G++   
Sbjct: 202 RPGDPLSHREALVQRLALV-NLDTTSILNNVAYYDTSLEKPIKQFQKMHGLQPDGVIGPQ 260

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 261 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDVGREVFEAKVV 318

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++ + +I      
Sbjct: 319 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHRMEIIRGWSDP 378

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + +P  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 379 EVIDPALIDWETVDPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 438

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 439 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 492

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 493 Y-EEGVLHYRDDIYHYDALALG 513


>gi|326424107|ref|NP_761768.2| L,D-transpeptidase YcbB [Vibrio vulnificus CMCP6]
 gi|319999488|gb|AAO11295.2| L,D-transpeptidase YcbB [Vibrio vulnificus CMCP6]
          Length = 535

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 102/395 (25%), Positives = 173/395 (43%), Gaps = 36/395 (9%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           +   I A  L   +      +   + F N  +R+    D  +P+  +             
Sbjct: 166 LSADIQAGYLATFVRSLRSPLQRHQQFANRYSRLLKARDHAVPLFHQ------------- 212

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKL 144
                        +  L LG+       L +RL + G         +  +D  +E AVK 
Sbjct: 213 -------------VGLLKLGDKLPDRANLIKRLEVVGLETSHLKRDIKYYDTQLELAVKQ 259

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL   G+V   TL+ +N+    R+  + +N  R +   E++     VLVN+P   
Sbjct: 260 FQKMHGLTQDGVVGPITLKWLNMTPAQRLHSMALNSERSRLWPEER--DLLVLVNVPGYE 317

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           ++    G+    S V+VGR  R+TPI+  +++ ++ NP W +P++I+ KD++  ++ D  
Sbjct: 318 MKFWYKGEEIFESKVVVGRKSRKTPIMVGKMDGVVLNPVWNVPKTIMVKDILPKVKYDQS 377

Query: 265 YLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           +L   NI +++    +  V  + +DW      +F +  RQ  G  NA+   K    ++  
Sbjct: 378 FLTKQNIEIVEGWDSQTAVNPQTIDWTKVSLKSFPYKMRQLAGDKNALGLYKFNIPNKRA 437

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            ++HDTP   LF    R  +SGCVRV+N     + LLK T            +    T +
Sbjct: 438 IFLHDTPSKSLFQEDSRAFSSGCVRVQNADQFALQLLK-TQGLEEELSNLATRQEANTMI 496

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            L   +PVH +Y + W   +  + +RDDIY  D V
Sbjct: 497 PLKRRIPVHIIYQTVWFEGE-ELNYRDDIYQYDLV 530


>gi|327483956|gb|AEA78363.1| L,D-transpeptidase YcbB [Vibrio cholerae LMA3894-4]
          Length = 536

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 87/322 (27%), Positives = 163/322 (50%), Gaps = 16/322 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +D  +E  +K FQ  HGL   G++   
Sbjct: 201 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDTSLEKPIKQFQKMHGLQTDGVIGPQ 259

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+
Sbjct: 260 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFEAKVV 317

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++ + +I      
Sbjct: 318 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHRMEIIRGWSDP 377

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + +P  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 378 EVIDPALIDWETVDPETFPYRLRQLAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 437

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       LL +                 T  + L   +PVH +Y + W
Sbjct: 438 RAFSSGCIRVENAEKFAQTLLANQGITLDDFPVS------TQAIALKKRIPVHIIYQTVW 491

Query: 397 SPKDSIIQFRDDIYGLDNVHVG 418
             ++ ++ +RDDIY  D + +G
Sbjct: 492 Y-EEGVLHYRDDIYHYDALALG 512


>gi|320156749|ref|YP_004189128.1| L,D-transpeptidase YcbB [Vibrio vulnificus MO6-24/O]
 gi|319932061|gb|ADV86925.1| L,D-transpeptidase YcbB [Vibrio vulnificus MO6-24/O]
          Length = 518

 Score =  368 bits (945), Expect = e-99,   Method: Composition-based stats.
 Identities = 102/395 (25%), Positives = 173/395 (43%), Gaps = 36/395 (9%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           +   I A  L   +      +   + F N  +R+    D  +P+  +             
Sbjct: 149 LSADIQAGYLATFVRSLRSPLQRHQQFANRYSRLLKARDHAVPLFHQ------------- 195

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKL 144
                        +  L LG+       L +RL + G         +  +D  +E AVK 
Sbjct: 196 -------------VGLLKLGDKLPDRANLIKRLEVVGLETSHLKRDIKYYDTQLELAVKQ 242

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL   G+V   TL+ +N+    R+  + +N  R +   E++     VLVN+P   
Sbjct: 243 FQKMHGLTQDGVVGPITLKWLNMTPAQRLHSMALNSERSRLWPEER--DLLVLVNVPGYE 300

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           ++    G+    S V+VGR  R+TPI+  +++ ++ NP W +P++I+ KD++  ++ D  
Sbjct: 301 MKFWYKGEEIFESKVVVGRKSRKTPIMVGKMDGVVLNPVWNVPKTIMVKDILPKVKYDQS 360

Query: 265 YLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           +L   NI +++    +  V  + +DW      +F +  RQ  G  NA+   K    ++  
Sbjct: 361 FLTKQNIEIVEGWDSQTAVNPQTIDWTKVSLKSFPYKMRQLAGDKNALGLYKFNIPNKRA 420

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            ++HDTP   LF    R  +SGCVRV+N     + LLK T            +    T +
Sbjct: 421 IFLHDTPSKSLFQEDSRAFSSGCVRVQNADQFALQLLK-TQGLEEELSNLATRQEANTMI 479

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            L   +PVH +Y + W   +  + +RDDIY  D V
Sbjct: 480 PLKRRIPVHIIYQTVWFEGE-ELNYRDDIYQYDLV 513


>gi|89092899|ref|ZP_01165851.1| hypothetical protein MED92_10574 [Oceanospirillum sp. MED92]
 gi|89082924|gb|EAR62144.1| hypothetical protein MED92_10574 [Oceanospirillum sp. MED92]
          Length = 411

 Score =  368 bits (945), Expect = e-99,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 173/370 (46%), Gaps = 12/370 (3%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISG 122
           ++  P   ++ I   E+     + +     WP L   + L  G+ S  + +LR RL++ G
Sbjct: 45  ETPEPQGIEKQILALEEHKIRLEQLSLANQWPSLLKTKLLRFGDESTVIPKLRTRLMLLG 104

Query: 123 DLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           DLD     +     F   + +A+  FQ RHGL   G+   +T   +NV    R  Q+ VN
Sbjct: 105 DLDELVHCELDDPLFGIDLHNALIKFQKRHGLKADGIYGPATRRELNVSPSSRALQITVN 164

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           + R+K      +  RY+ VNIP   L   E+G   L    IVG+  R+TP+ ++ +NR++
Sbjct: 165 IDRLKSFNP--VSDRYIQVNIPEYRLRLFEHGAEILSMKTIVGKKKRKTPVFNTTVNRLV 222

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNS-PEPPN 295
            NP W +P+SI  KD++  L  DP+YLK  N+ ++   G    +   ++VD +   +  N
Sbjct: 223 INPSWHVPKSIAYKDIVPELESDPEYLKKMNLKLVTGWGNSKTILSQDQVDLDKLYKGEN 282

Query: 296 F-IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
           +  F + P     + S K       + Y+HDT    LF    R  +SGC+RV     L  
Sbjct: 283 YQRFWEPPSNNGTLGSVKFLTTGPYSVYLHDTSAKRLFEKETRAFSSGCIRVEKPRSLAN 342

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L++ T  W +  ++      +   + +   + +H  Y +A+  ++  + FR D+Y  D 
Sbjct: 343 ELMRMTHGWEKEKLDTYFNDTERKTINMPDTIDLHVTYWTAFIDENG-LNFRRDLYKKDR 401

Query: 415 VHVGIIPLPE 424
             +  +   E
Sbjct: 402 WEIAQLKQTE 411


>gi|37680299|ref|NP_934908.1| hypothetical protein VV2115 [Vibrio vulnificus YJ016]
 gi|37199046|dbj|BAC94879.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
           YJ016]
          Length = 535

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 103/395 (26%), Positives = 173/395 (43%), Gaps = 36/395 (9%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           +   I A  L   +      +   + F N  +R+    D  +P+  +             
Sbjct: 166 LSADIQAGYLATFVRSLRSPLQRHQQFANRYSRLLKARDHAVPLFHQ------------- 212

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKL 144
                        +  L LG+       L +RL + G         +  +D  +E AVK 
Sbjct: 213 -------------VGLLKLGDKLPDRANLIKRLEVVGLETSHLKRDIKYYDTQLELAVKQ 259

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL   G+V   TL+ +N+    R+  + +N  R +   E++     VLVN+P   
Sbjct: 260 FQKMHGLTQDGVVGPITLKWLNMTPAQRLHSMALNSERSRLWPEER--DLLVLVNVPGYE 317

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           ++    G+    S V+VGR  R+TPI+  +++ ++ NP W +P++I+ KD++  ++ D  
Sbjct: 318 MKFWYKGEEIFESKVVVGRKSRKTPIMVGKMDGVVLNPVWNVPKTIMVKDILPKVKYDQS 377

Query: 265 YLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNN 320
           +L   NI +I+    +  V  + +DW      +F +  RQ  G  NA+   K    ++  
Sbjct: 378 FLTKQNIEIIEGWDSQTAVNPQTIDWTKVSLKSFPYKMRQLAGDKNALGLYKFNIPNKRA 437

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            ++HDTP   LF    R  +SGCVRV+N     + LLK T            +    T +
Sbjct: 438 IFLHDTPSQSLFQEDSRAFSSGCVRVQNADQFALQLLK-TQGLEEELSNLATRQEANTMI 496

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            L   +PVH +Y + W   +  + +RDDIY  D V
Sbjct: 497 PLKRRIPVHIIYQTVWFEGE-ELNYRDDIYQYDLV 530


>gi|46202780|ref|ZP_00052619.2| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 465

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 112/363 (30%), Positives = 171/363 (47%), Gaps = 9/363 (2%)

Query: 16  VYLILPMGLSLVEKPI-HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
              +L  G  L    +  A  L     E+       RF   LA      +  I +IS + 
Sbjct: 101 SAALLRFGRDLSVGAVLPARNLGGFGAETRGEFDGARFLKALAEGKPLTEQ-IDVISPQY 159

Query: 75  --IAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
               +    +   + I + GGWP +P    L  G++   V  LR RLI SGDL       
Sbjct: 160 VGYMRLRDGLEKARAIAAAGGWPSIPDGAKLVPGDTDDRVPVLRRRLIASGDLGDGLAEG 219

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +DA +  AVK FQ+RHGL+P   +   TL  +NVP D R RQ+ VN+ R +  +    
Sbjct: 220 RTYDAPLAEAVKRFQLRHGLEPDATIGGKTLAHLNVPADARARQIAVNMERWR-WMPHSF 278

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G  ++ VNI A  +E VE+G V +   V+VG V   TP + + ++ ++ NP W +P SI 
Sbjct: 279 GRHHIAVNIAAQQMEVVEDGAVAMSMRVVVGDVKHPTPSMSTTMSSVVLNPAWRVPTSIA 338

Query: 252 QKDMMALLRQDPQYLKDNNIHMID--EKGKEVFVEEVDWNSP-EPPNFIFRQDPGKINAM 308
            K+++  LR+DP YL  + + ++D  E   E   + VDWN+  +   +  RQ PG  NA+
Sbjct: 339 NKEILPKLRKDPNYLTSSKLQIVDYPEGSPESAGDGVDWNAIGKKFPYRLRQPPGPDNAL 398

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K      ++ YMHDT    +     R  + GCVR+   ++L   +L      +   I
Sbjct: 399 GQLKFNLTDSDDIYMHDTNNRRVXGRSYRALSHGCVRLERPVELGDVMLGPRRKDNWRKI 458

Query: 369 EEV 371
           E +
Sbjct: 459 EAI 461


>gi|54309518|ref|YP_130538.1| hypothetical protein PBPRA2351 [Photobacterium profundum SS9]
 gi|46913954|emb|CAG20736.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 572

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 103/337 (30%), Positives = 160/337 (47%), Gaps = 14/337 (4%)

Query: 94  WPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA------FDAYVESAVKLFQ 146
           WP    + +  LG+       L   L   GD+       +           +   VK FQ
Sbjct: 227 WPGFYQQGIIRLGDRLKDPDSLITILERMGDITEYDADRMRTSQLRSLTIPLSLGVKTFQ 286

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
            RHGL   G++   T   + +    RIR L +N  R++    +   +  ++VNIP   L 
Sbjct: 287 KRHGLKVDGVIGPKTRYWLAITPKERIRVLALNAQRVRLWPAEYNSV--LIVNIPGYELN 344

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
              + K    S VIVGR  R+TP++ SR+N ++FNPYW +P+SI++KD++   R+D  YL
Sbjct: 345 LWLDNKHVFDSKVIVGRPSRRTPLISSRVNSVVFNPYWNVPKSIMRKDILPKARRDRSYL 404

Query: 267 KDNNIHMIDEKGK--EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTY 322
             +N  +I       ++ +  +  +      F +  RQ PG  NA+   K    + N+ Y
Sbjct: 405 YRHNYAVIRSWNSSEQIPIHTIHPSMLYAKTFPYRLRQKPGNKNALGLYKFIIPNDNSIY 464

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDTP   LFN   R  +SGCVRV N   L + LL  +   +     E+   ++T  + L
Sbjct: 465 LHDTPAKSLFNKDDRAFSSGCVRVENADVLALILLNYS-GVTDQRFYELSGRKQTKTIGL 523

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
             +V VH +Y +AW     ++ FRDD+Y  D V  G 
Sbjct: 524 RNKVKVHLIYQTAWVDDGGLVNFRDDVYLYDKVGGGS 560


>gi|90414498|ref|ZP_01222473.1| hypothetical protein P3TCK_00890 [Photobacterium profundum 3TCK]
 gi|90324406|gb|EAS40968.1| hypothetical protein P3TCK_00890 [Photobacterium profundum 3TCK]
          Length = 572

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 111/393 (28%), Positives = 174/393 (44%), Gaps = 28/393 (7%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG--WPEL 97
                 +I N+R   F+  +    D+              K I   Q + +     WP  
Sbjct: 183 TGRLLDAIDNNRMRYFVTSLKPVNDNY------------NKMILAMQALEASESEHWPGF 230

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLS------VAFDAYVESAVKLFQMRHG 150
             + +  LG    +   L   L   GD+                   +   VK FQ RHG
Sbjct: 231 YQQGIIRLGGRLNNPDSLITILERMGDITEYDADRMRASQLRTLTIPLSLGVKTFQKRHG 290

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G++   T   + +    RIR L +N  R++    +   +  ++VNIP   L    +
Sbjct: 291 LKVDGVIGPKTRYWLAITPKERIRVLALNAQRVRLWPAEHNSV--LIVNIPGYDLNLWLD 348

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
            K    S VIVGR  R+TP++ SR+N ++FNPYW +P+SI++KD++   R+D  YL  +N
Sbjct: 349 NKHVFDSKVIVGRPSRRTPLISSRVNSVVFNPYWNVPKSIMRKDILPKARRDRSYLYRHN 408

Query: 271 IHMIDEKGK--EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDT 326
             +I       ++ +  +  +      F +  RQ PG  NA+   K    + ++ Y+HDT
Sbjct: 409 YAVIRSWNSSEQIPIHTIHPSMLYAKTFPYRLRQKPGNKNALGLYKFNIPNDDSIYLHDT 468

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LFN   R  +SGCVRV N   L + LL  +   +     E+   +KT  + L  +V
Sbjct: 469 PAKSLFNKDDRAFSSGCVRVENADVLALILLNYS-GVTEQRFYELSGRKKTKTIGLRNKV 527

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
            VH +Y +AW     ++ FRDD+Y  D V  G 
Sbjct: 528 QVHLIYQTAWVDDGGLVNFRDDVYLYDKVGDGS 560


>gi|260776045|ref|ZP_05884940.1| hypothetical protein VIC_001429 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607268|gb|EEX33533.1| hypothetical protein VIC_001429 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 517

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 97/330 (29%), Positives = 167/330 (50%), Gaps = 11/330 (3%)

Query: 95  PELPIRPLH-LGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P+   R L  +G+   + + L  R+ ++  DL   +     +D  +E+AVK FQ  HGL 
Sbjct: 191 PKYTQRGLRQVGDKLKNREVLLVRMEMVDVDLSDVRRDVNWYDVTLETAVKQFQRLHGLT 250

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++   T+  +N+    R+  L +N  R +    ++     ++VN+P   ++   +G+
Sbjct: 251 DDGIIGPDTIRWLNISPSERLSILALNAERGRLWPIER--DTIIVVNVPGFEMKYWYSGQ 308

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
               S V+VGR  R TP++ ++++ ++ NP W +P  I+ +D++  +++DP+YL   NI 
Sbjct: 309 EVFESKVVVGRKGRPTPMMTTKLDSLILNPTWNVPWKIMVEDIIPKVKEDPEYLVRQNIT 368

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++ + G +  +  E++DW +  P  F +R  Q  G  NA+   K    +R   Y+HDTP 
Sbjct: 369 IVPKWGSKELINPEDIDWQNMRPSAFPYRMTQLSGNNNALGLYKFNTPNRRAIYLHDTPS 428

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF+   R  +SGC+RV +       LL+          EE +   K   + L   VPV
Sbjct: 429 KNLFDEASRAFSSGCIRVEHADQFATRLLESQGLDMSTLDEEELAANK--SIPLKQRVPV 486

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           H +Y +AWS +   I +RDDIY  D    G
Sbjct: 487 HIIYQTAWS-EGGKIHYRDDIYRWDRFSYG 515


>gi|327189298|gb|EGE56466.1| hypothetical protein RHECNPAF_642003 [Rhizobium etli CNPAF512]
          Length = 653

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 102/389 (26%), Positives = 168/389 (43%), Gaps = 26/389 (6%)

Query: 55  FLARVDMGIDSDIPIISKE--TIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSV 109
            LAR+     + +   S +       +  +A  +     G   ++ I   + L  G+SS 
Sbjct: 269 KLARMSPDAGAYLTSRSPDGPQFEALKAELAKLRA-ADGGNEEQIVISLDKLLRPGDSSP 327

Query: 110 SVQRLRERLIISG----------DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            V  + + L   G           L    G S  +   + + V+ FQ   GL   G++  
Sbjct: 328 EVANIVKALAKHGSETLKTNHAATLASYTGGSD-YSPEIVALVEDFQKERGLKADGVIGQ 386

Query: 160 STLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           +T+ AM        +I +L V + + +  L + +G RYV++N PA       +GK  L  
Sbjct: 387 ATVRAMTGGDTNASKIDKLVVAMEQAR-WLPEDLGSRYVMINQPAYMAYYHNDGKEQLSM 445

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V+VG  + QT      I  + FNP+W +P+SII  +M+  LR DP YL      + +  
Sbjct: 446 RVVVGGKNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVN 504

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           G  V    VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +R
Sbjct: 505 GHAVASSSVDWYG-STDNVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMR 563

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             + GCVR+ N   +   +L      +   + + + + +   V++  ++PV+  Y +AW 
Sbjct: 564 ALSHGCVRLSNPRAMAAAVLGT----TVDDVAKQIASGQNHAVRVPQKIPVYVSYFTAWP 619

Query: 398 PKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
            KD ++++ DD+YG D             
Sbjct: 620 NKDGVVEYFDDVYGRDAYVEKAFDATTKA 648


>gi|261211004|ref|ZP_05925294.1| hypothetical protein VCJ_001260 [Vibrio sp. RC341]
 gi|260839979|gb|EEX66579.1| hypothetical protein VCJ_001260 [Vibrio sp. RC341]
          Length = 522

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 92/321 (28%), Positives = 162/321 (50%), Gaps = 14/321 (4%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G+S      L  RL +   D+   +     +D  +  A+K FQ  HGL   G++   T
Sbjct: 200 REGDSLTHRDALLRRLSLVNLDITDVREDVAFYDQSLVKAIKQFQSMHGLKTDGVIGPET 259

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +N  V  R+  L +N  R++    Q      ++VN+P   ++  + G+    + V+V
Sbjct: 260 IKWLNKSVTERVTLLALNAERLRLW--QTPQDTVIVVNVPGFDMKYWDAGREVFEAKVVV 317

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--K 279
           GRV R TP+++++++ ++ NP W +PR I+ +D++ ++++D QYL ++ I +I      +
Sbjct: 318 GRVTRPTPVMNTKLDSLIINPTWNVPRKIMVEDILPMVKRDHQYLAEHQIEIIRGWSDPE 377

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            V  +E+DW + +P  F +  RQ  G  NA+   K    +    Y+HDTP   LFNN  R
Sbjct: 378 VVDPQEIDWATVDPETFPYRLRQQAGVQNALGMYKFNTPNSRAIYLHDTPSKHLFNNAAR 437

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+RV N       LL D        + +      T  + L   +PV  +Y + W 
Sbjct: 438 AFSSGCIRVENAQKFAQALL-DQQGIVLNDVPDT-----TKTIALKKRIPVQIIYQTVWY 491

Query: 398 PKDSIIQFRDDIYGLDNVHVG 418
            +  ++ +RDDIY  D++ +G
Sbjct: 492 -EGGVLNYRDDIYRYDSLALG 511


>gi|330809814|ref|YP_004354276.1| hypothetical protein PSEBR_a2969 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377922|gb|AEA69272.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 520

 Score =  366 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 170/371 (45%), Gaps = 11/371 (2%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQR 113
            L  V    +   P +  +         A  +       W  +P  PL         V  
Sbjct: 158 GLQNVASAFEQARPNL--DLYRNLRGLYARLRQ-QPLSDWQPVPGGPLLQPDKQDARVPA 214

Query: 114 LRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           L +RL   G L  P       +   +  A+K FQ++H L   G+V   T+  +N+   +R
Sbjct: 215 LAQRLFNEGYLSTPPLVTDEHYSPTLVEAMKSFQLQHSLQADGVVGPWTVTELNISPAMR 274

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
             QL++NL R++  L Q +    VLVN+ AA L     G+   ++   VGR  RQTP+L 
Sbjct: 275 REQLRINLERMR-WLAQDVENDSVLVNVAAAQLTVYRGGEPIWQTRTQVGRAQRQTPLLK 333

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           S + R+  NP W IP +I+++D +  +R+DP++L  +N+ ++D +G  +  E++DW    
Sbjct: 334 SHVTRLTLNPTWTIPPTIMREDKLPEIRRDPEFLARHNLRILDSEGLPLMAEDIDWE--H 391

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
           P N + RQDPG  N +    I F +  + Y+HDTP   LF+   R  +SGCVR+  ++ L
Sbjct: 392 PGNLMLRQDPGPKNPLGKMAIRFPNPFSVYLHDTPSQALFSKGPRAFSSGCVRIEQVMHL 451

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              L+       R   + ++ +  T   +LA  VP+   Y +A +       +  DIY  
Sbjct: 452 RDLLVSPA---ERARTDTLLASETTHEFRLARPVPILLGYWTAQADSQGQPLYIPDIYAR 508

Query: 413 DNVHVGIIPLP 423
           D          
Sbjct: 509 DATLSAAQGRA 519


>gi|261253179|ref|ZP_05945752.1| hypothetical protein VIA_003204 [Vibrio orientalis CIP 102891]
 gi|260936570|gb|EEX92559.1| hypothetical protein VIA_003204 [Vibrio orientalis CIP 102891]
          Length = 517

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 95/318 (29%), Positives = 168/318 (52%), Gaps = 10/318 (3%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G+   +   L +RL I   DL   +     FD  ++ AVK FQ  HGL P G++   T
Sbjct: 200 RVGDRLENRDVLIQRLSIVDVDLIDVRKDIRWFDQTLKVAVKQFQNLHGLKPDGIIGPET 259

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +N+P++ R+  L +N  RI+    Q+     ++VN+P+  +    +G+    S V+V
Sbjct: 260 IKWINLPIEKRLSTLAINAERIRYWPSQR--DTIIVVNVPSFQMTYWSSGEEVFESKVVV 317

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE- 280
           G+++R TP++  R++ ++ NP W +P  I+ +D++  ++ D  YL   NI +I + G + 
Sbjct: 318 GKIERPTPLMQIRLDSLILNPTWNVPWKIMVEDIIPKVQHDRAYLTKQNIKIIPKWGSDE 377

Query: 281 -VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +  E +DW++  P +F +R  Q+ G  NA+   K    +R   ++HDTP   LF+   R
Sbjct: 378 IINPETIDWDNLNPSSFPYRMTQESGNSNALGLYKFNTPNRRAIFLHDTPSKSLFSRQQR 437

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+RV N       L++      R  ++E         + L + VPVH +Y +AW 
Sbjct: 438 AFSSGCIRVENADVFAKRLIEAQGVSRRAKLDE--PPGPNQSIPLKSRVPVHIIYQTAWY 495

Query: 398 PKDSIIQFRDDIYGLDNV 415
            ++  + +R+DIY LD  
Sbjct: 496 -EEGSVHYREDIYRLDKA 512


>gi|75675184|ref|YP_317605.1| hypothetical protein Nwi_0991 [Nitrobacter winogradskyi Nb-255]
 gi|74420054|gb|ABA04253.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 811

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 98/425 (23%), Positives = 173/425 (40%), Gaps = 41/425 (9%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARV---DMGIDSDIPIIS 71
               ++          +H + +   I    H +  ++    +         +DS  P   
Sbjct: 339 LTASMMDYARQAQSGRMHWTQVSADIQYPEHPVDPEQVLTNVTTAKDSSAALDSYNPP-- 396

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRP---LHLGN--SSVSVQRLRERLIISGDLDP 126
            +     ++ +A  +   S G   E+   P              V ++R RL ++     
Sbjct: 397 HKLFQALKRKLAELRK-DSEGPVIEIAEGPGLVFRKNAVIEDPRVPQIRARLGVT----- 450

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIKK 185
                  FDA V +AV+ FQ RH L P G++ ++T+ A+N P     I  +  N+ R + 
Sbjct: 451 QNPDDTRFDADVAAAVREFQARHHLKPDGILGNNTIRALNGPKKDHTIDTIIANMERWRW 510

Query: 186 LL----EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMF 240
           L        +G  Y ++NIP  SL+ +++G     + V+VG+     TP+L   +  I  
Sbjct: 511 LPRELGAPSLGDAYAILNIPDYSLKVMQHGAPIWSTRVVVGKPGLHATPLLTETMKYITV 570

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +P SII K+ +  L+QDP  L    + +  ++   + +                Q
Sbjct: 571 NPTWNVPPSIIYKEYLPALQQDPTVLSRMGLKLERDRNGGIHIS---------------Q 615

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK-- 358
            PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL   
Sbjct: 616 PPGERNALGRIRFNFPNKFLVYQHDTPDKHLFAKEKRAFSHGCMRVQNPDQYAATLLNIV 675

Query: 359 -DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
                ++   +   +  R    +   T  PVH  Y +A+  +   +Q R D+YG D   +
Sbjct: 676 LPQEHYTPEKV-RSMYGRNEFNINFPTPFPVHITYQTAFVDQAGKLQLRGDVYGRDAKML 734

Query: 418 GIIPL 422
            ++  
Sbjct: 735 TLLRN 739


>gi|288941918|ref|YP_003444158.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
 gi|288897290|gb|ADC63126.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
          Length = 557

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 105/352 (29%), Positives = 168/352 (47%), Gaps = 18/352 (5%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL-SV 132
               ++A++ Y           LP    L LG+    V +LRERL + G  + +      
Sbjct: 184 YQDLKRALSHYAGARQLKALEPLPGGSVLSLGSRGERVAQLRERLRLLGYSERTPPDRPE 243

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL-RIRQLQVNLMRIKKLLEQKM 191
            FDA +  AV+ FQ  HGL   G V   TL  +N PVD  RI ++++NL R++  L + +
Sbjct: 244 TFDAALSEAVRAFQRGHGLGADGAVGPQTLAVINDPVDESRIERIRINLERMR-WLYEDL 302

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
              YV V++       V   ++   + VIVG+ D QTP+   R++ ++ NP W +P SI 
Sbjct: 303 PPDYVFVDVADYMAHLVRGREIAWSTRVIVGKEDSQTPMFRDRLDHLVLNPTWTMPVSI- 361

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
                   ++    + D  I +    G+ V       N+ +   +   Q PG  NA+   
Sbjct: 362 --------QKTFTKVSDKYILIDRRTGRRVSGG----NATDYKRYRVVQQPGPDNALGRV 409

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F +R+  YMHDTP   LF    R  + GCVRV+N +     LL+++ +W R  I+ V
Sbjct: 410 KFMFPNRHAVYMHDTPSKALFGRSARALSHGCVRVQNPMKFAELLLEES-SWDRARIDSV 468

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           ++  KT  V L+  +PV   Y++A +  +  ++ R D+YG D      +  P
Sbjct: 469 LEGAKTRYVNLSEPLPVLLYYLTARADAEGNLRVRRDVYGRDPAVAEALDQP 520


>gi|332141802|ref|YP_004427540.1| putative periplasmic protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551824|gb|AEA98542.1| putative periplasmic protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 462

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 107/380 (28%), Positives = 170/380 (44%), Gaps = 32/380 (8%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPEL----------------PIRPLHLGNSSVSVQRLRER 117
            + Q + A AFY  I  +GGW  L                   P++    + ++  L  R
Sbjct: 80  QLKQMKSAYAFYSSIAQQGGWKALNEDLLLKNGALRKAAADETPIYSEEQAQAITALISR 139

Query: 118 LII---------SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L           +  L         F+  VE+AVK FQ RHGL   G+V   TL A+NV 
Sbjct: 140 LGREYPSINTNCTHALTAVNSAPCVFNKDVENAVKDFQRRHGLLVDGVVGRKTLAALNVT 199

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
              + +QL +N+ R++ + E+K    YVLVNIP   L  + NGKV     V+VG+    T
Sbjct: 200 AKKKAQQLALNITRLE-MFEEKDSDAYVLVNIPEFRLRYISNGKVKATKDVVVGKPSWAT 258

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEE 285
           P     I + + NP W IP SI  K++   +  +P YL++NNI +  +     + V    
Sbjct: 259 PSFSDHIEKFVVNPEWRIPISIATKEIAPKVADNPNYLEENNIVIRKDSFVDDELVDPNT 318

Query: 286 VDWNSPEPPNF--IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
           +DW   +P  F     + P + N +   K  F +R+  Y+HDTP    F    R  + GC
Sbjct: 319 IDWEDMKPYQFDHFLVKLPNEKNPLGKVKYLFPNRHAVYVHDTPYQQWFKETNRAASHGC 378

Query: 344 VRVRNIIDLDVWLLKDTPTWS-RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           +R+ +   L   + ++    S   ++    +  ++    L   +P+H VY +AW+ ++  
Sbjct: 379 IRLEDPFSLAQLIAEEQGVDSLMDNVISARELSQSKTFHLEEPLPIHLVYWTAWADENGK 438

Query: 403 IQFRDDIYGLDNVHVGIIPL 422
             FR+DIY  D      +  
Sbjct: 439 ANFRNDIYQRDRRDAEALTQ 458


>gi|260768291|ref|ZP_05877225.1| hypothetical protein VFA_001342 [Vibrio furnissii CIP 102972]
 gi|260616321|gb|EEX41506.1| hypothetical protein VFA_001342 [Vibrio furnissii CIP 102972]
          Length = 517

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 96/358 (26%), Positives = 164/358 (45%), Gaps = 12/358 (3%)

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG 122
           ID   P        Q   A  +   I  +     +  R    G+     + L +RL +  
Sbjct: 162 IDEYTP--QDAAYRQLVNAYRYLSQIEPQMLSVYVQARLKRPGDKLEDRRTLIQRLSLVN 219

Query: 123 -DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
            D+         +D  +   VK FQ  HGL   G++   TL+ +N+ V  R+  L +N  
Sbjct: 220 IDVAGISDNVTWYDNSLVEPVKQFQKMHGLKIDGIIGPDTLKWLNMKVPERLALLALNAE 279

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++    Q      ++VN+P  +L+   +GK    S V+VGRV R TP++ ++++ ++ N
Sbjct: 280 RMRLWTTQD--DTVIVVNVPGYNLKYWYSGKPVFESKVVVGRVTRPTPVMSTKLDSLILN 337

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEPPNFIF- 298
           P W +P  I+ +D++ + ++D  YL  ++I +I+     + +    +DW +  P  F + 
Sbjct: 338 PTWNVPHKIMVEDILPMTKRDASYLSRHHIDIIESWKSDQTLDPALIDWQNVNPKTFPYR 397

Query: 299 -RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ  G  NA+   K    ++   Y+HDTP   LFN+  R  +SGC+RV +       LL
Sbjct: 398 MRQQAGNQNALGLYKFNTPNKRAIYLHDTPSKHLFNHPTRAFSSGCIRVEHADQFATTLL 457

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           +         I           + L   +PVH +Y + W  +   + +RDDIY LD +
Sbjct: 458 ETQGINDSELIPNPDAA--NRAIPLKKRIPVHIIYQTVWY-EGGEVHYRDDIYRLDRI 512


>gi|209549608|ref|YP_002281525.1| peptidoglycan-binding protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535364|gb|ACI55299.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 636

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 101/388 (26%), Positives = 169/388 (43%), Gaps = 24/388 (6%)

Query: 55  FLARVDMGIDSDIPIISKE--TIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSV 109
            LAR+   + + I   S +       +  +A  +  +  G    + +   + L  G+SS 
Sbjct: 252 KLARMSPDVGAYIASRSPDGAQFEALKAELAKLRA-VDGGNEERIVVSLDKSLKPGDSSP 310

Query: 110 SVQRLRERLIISGDLD---------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  + + +   G             +   S  +   + S V+ FQ   GL   G++  +
Sbjct: 311 EIANIVKAIGKHGSETLKTDHAATLAAYAGSTDYSPDIVSLVEAFQQERGLKADGVIGQA 370

Query: 161 TLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           T+ AM        +I +L V + + +  L + +G RYV++N PA  +    +GK  L   
Sbjct: 371 TVRAMTGGDTNASKIDKLVVAMEQAR-WLPEDLGSRYVMINQPAFMVYYHNDGKEQLSMR 429

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           V+VG  + QT      I  + FNP+W +P+SII  +M+  LR DP YL      + +  G
Sbjct: 430 VVVGGKNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNG 488

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
             V    VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +R 
Sbjct: 489 HAVASSSVDWYG-STNNVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRA 547

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GCVR+ N   +   +L      +   + + + T +   VK+  ++PV+  Y +AW  
Sbjct: 548 LSHGCVRLANPRAMAAAVLGT----TVDDVAKQIATGQNHAVKVPQKIPVYVSYFTAWPN 603

Query: 399 KDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
           KD ++++ DD+YG D             
Sbjct: 604 KDGVVEYFDDVYGRDGYVDKAFDATTKA 631


>gi|86357997|ref|YP_469889.1| hypothetical protein RHE_CH02382 [Rhizobium etli CFN 42]
 gi|86282099|gb|ABC91162.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 633

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 103/386 (26%), Positives = 167/386 (43%), Gaps = 21/386 (5%)

Query: 55  FLARVDMGIDSDIPIISKE--TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSV 111
            LAR+     + I   S +       +  +A  +   S      + +   L  G SS  +
Sbjct: 250 KLARMSPNAGAYIASRSPDSPQFEALKAELAKLRAADSNEEQIVISLQGLLKPGESSSEI 309

Query: 112 QRLRERLIISGDLD---------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             + + L   G             +   S  +   + S V+ FQ  HGL P G++  +T+
Sbjct: 310 ANIVKALQKHGSETLKTDHAATFAAYAGSSDYSPDIVSLVEDFQKEHGLKPDGVIGQATV 369

Query: 163 EAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
            AM        +I +L V + +++  L + +G RYV++N PA       +GK  L   V+
Sbjct: 370 RAMTGGDTNTSKIDKLVVAMEQVR-WLPEDLGSRYVMINQPAYMAYYHNDGKEQLSMRVV 428

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG  + QT   +  I  + FNP+W +P+SII  +M+  LR DP YL      + +  G  
Sbjct: 429 VGGKNNQTYFFNDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNGHA 487

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           V    VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +R  +
Sbjct: 488 VASSSVDWYGSTA-NVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRALS 546

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
            GCVR+ N   +   +L      +   +   + + +   VK+  ++PV+  Y +AW  KD
Sbjct: 547 HGCVRLANPRAMAAAVLGT----TADDVARQIASGQNHAVKVPQKIPVYVSYFTAWPNKD 602

Query: 401 SIIQFRDDIYGLDNVHVGIIPLPEDH 426
            ++++ DD+YG D             
Sbjct: 603 GVVEYFDDVYGRDAYVDKAFDATTKA 628


>gi|149191672|ref|ZP_01869915.1| hypothetical protein VSAK1_04600 [Vibrio shilonii AK1]
 gi|148834513|gb|EDL51507.1| hypothetical protein VSAK1_04600 [Vibrio shilonii AK1]
          Length = 548

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 95/339 (28%), Positives = 168/339 (49%), Gaps = 17/339 (5%)

Query: 85  YQDILSRGGWPELPIRPL---HLGNSSV--SVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           Y D++S+    ++  + +    LG++    +   L ERL  S ++  +      FD  ++
Sbjct: 205 YIDLVSKSQMTKIEYQQVGLTRLGDTLPQEAYLTLIERLSES-NVFITAREDRYFDELLD 263

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A++ FQ  +GL+  G++  +T+E +N     ++R L +N  R +   +Q+     ++VN
Sbjct: 264 LAIREFQTIYGLNDDGIIGPNTIEWLNKSASDKLRILALNSERSRLWPQQR--ENIIVVN 321

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           +P   LE  + G+    S VIVGR  RQTP+L ++++ ++ NP W +P  I+ KD++  +
Sbjct: 322 VPNFQLEYWDEGEERFESRVIVGRASRQTPLLETKMDSLILNPTWNVPWKIMVKDIIPKV 381

Query: 260 RQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
           +Q+P YL    I +++       +    +DW       F +  RQ  G++NA+   K   
Sbjct: 382 KQNPTYLFSQRIEILEGWNNQARIDPTMIDWQEVNARRFPYRMRQQAGELNALGQYKFNT 441

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +    ++HDTP   LF+  +R  +SGCVRV +       LL+         +E+V   R
Sbjct: 442 PNAQAIFLHDTPSKHLFDESLRAFSSGCVRVEHADQFAQVLLEAQGK----TLEDVATDR 497

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
               + L   +PVH +Y +AW   D    FR D+Y  D 
Sbjct: 498 PNKAIALKQRIPVHIIYQTAWM-SDGKAHFRGDVYQYDA 535


>gi|146299088|ref|YP_001193679.1| hypothetical protein Fjoh_1328 [Flavobacterium johnsoniae UW101]
 gi|146153506|gb|ABQ04360.1| Uncharacterized protein [Flavobacterium johnsoniae UW101]
          Length = 539

 Score =  366 bits (939), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 106/353 (30%), Positives = 170/353 (48%), Gaps = 27/353 (7%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-----RPLHLGNSSVSVQRLRERLIISGDLDPSK 128
              + +  +  Y++I   G W ++ I     + L   +S   VQ++RERL + GDL    
Sbjct: 200 QYYKLQNVLQRYRNIEKNGLWKKIEIDEANYKELKPLDSGKVVQQIRERLFVVGDLK-ED 258

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
             S  +D  +  AV  ++ R+GL  +       ++ MN P+  RIR + +N+ R + +  
Sbjct: 259 SKSQYYDQEMMDAVLKYKKRYGLKLNYTFTKEQIDQMNEPISNRIRTIMLNMERCRWIPT 318

Query: 189 Q-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           +      YV+VNIP+  L  V++GK  L S V VG    +T I    I+RI+F+PYW +P
Sbjct: 319 KLAKADEYVMVNIPSFRLIYVKDGKYDLVSDVFVGTRMTETVIFSGNIDRIVFSPYWYVP 378

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SII+ ++   + +D  YL D+N+                WN         RQ PG  N+
Sbjct: 379 ASIIKNELKLKMAEDKNYLADHNME---------------WNGGS-----VRQKPGPNNS 418

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F + N+ Y+HDTP   LF+   R  + GC+ VR+   L + +LKD P W    
Sbjct: 419 LGLVKFMFPNPNDIYLHDTPAKSLFDFEKRTFSHGCINVRDAKKLALEILKDNPDWPVDK 478

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           I + +   K T   L  ++P++  Y +AW   D  I F  D+Y  D     ++
Sbjct: 479 INDAMSGEKETTCMLKNKIPIYIGYFTAWVTDDGEIGFYPDVYDRDKQLDKLL 531


>gi|254507080|ref|ZP_05119218.1| cell wall degradation protein [Vibrio parahaemolyticus 16]
 gi|219550075|gb|EED27062.1| cell wall degradation protein [Vibrio parahaemolyticus 16]
          Length = 517

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 9/296 (3%)

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL   +     +D  +  A+K FQ  HGL   G++   T + +NV +  R+  L +N  R
Sbjct: 221 DLANVRRDVTYYDMSLVPAIKQFQKLHGLKEDGVIGPETAKWLNVSMKDRLTTLALNAER 280

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           I+     K     ++VN+P+  +     GK    S V+VGR  R TP++ + ++ ++ NP
Sbjct: 281 IRYWPSDK--DTIIVVNVPSYEMTYWHGGKNVFESKVVVGRQARPTPLMITNLDTLILNP 338

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEPPNFIFR- 299
            W +P  I+ +D++  +++DP+YL   +I ++ + G    +  +++DW++  P +F +R 
Sbjct: 339 TWNVPWKIMVEDIIPKMKEDPEYLTRQHIEILPKWGSKERIDPQQIDWDAMNPKSFPYRM 398

Query: 300 -QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            Q  G  NA+   K    ++   Y+HDTP   LFN   R  +SGC+RV +       LL+
Sbjct: 399 TQLSGNQNALGLYKFNTPNKRAIYLHDTPSKGLFNEPQRAFSSGCIRVEHADVFASRLLE 458

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                ++  +      R    + L   +PVH +Y +AW  ++    +R+DIY LD 
Sbjct: 459 HQ-GLTKSKL-SAEADRSNKKIPLRKRIPVHIIYQTAWF-EEGKTHYREDIYQLDT 511


>gi|323492996|ref|ZP_08098133.1| hypothetical protein VIBR0546_16236 [Vibrio brasiliensis LMG 20546]
 gi|323312775|gb|EGA65902.1| hypothetical protein VIBR0546_16236 [Vibrio brasiliensis LMG 20546]
          Length = 448

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 94/317 (29%), Positives = 169/317 (53%), Gaps = 10/317 (3%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G+       L +RL I   +L   +     +D  +E+AVK FQ  HGL+  G++   T
Sbjct: 131 KVGDKLEQRDVLLQRLEIVDVNLLDVRKDVSWYDRTLETAVKQFQRLHGLEADGIIGPET 190

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +N+P++ R+  L +N  R +    Q+     ++VN+P+  ++   +G+   +S V+V
Sbjct: 191 IKWINLPIEKRLAILAINAERNRYWPVQR--DTIIVVNVPSFQMKYWNSGQEVFQSKVVV 248

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE- 280
           G+  R TP++ ++++ ++ NP W +P  I+ +D++  ++QD +YL   NI +I + G + 
Sbjct: 249 GKKARPTPVMMTKLDSLILNPTWNVPWKIMVEDIIPKVKQDREYLARQNIMIIPKWGSQE 308

Query: 281 -VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +  +E+DW++  P  F +R  Q  G+ NA+   K    +R   Y+HDTP   LF+   R
Sbjct: 309 VINPDEIDWDNLNPHQFPYRMTQLSGQANALGLYKFNTPNRRAIYLHDTPSKGLFDETQR 368

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+RV N       LL+          EE V       + L + +PVH +Y +AW 
Sbjct: 369 AFSSGCIRVENADVFADTLLQTQGLVIEQ--EEQVSPTPNQAIPLKSRIPVHIIYQTAWY 426

Query: 398 PKDSIIQFRDDIYGLDN 414
            ++  + +R+DIY LD 
Sbjct: 427 -EEGNVHYREDIYRLDR 442


>gi|333008910|gb|EGK28370.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-272]
 gi|333020220|gb|EGK39490.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-227]
          Length = 550

 Score =  365 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 114/416 (27%), Positives = 173/416 (41%), Gaps = 81/416 (19%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPY-------ALSTPPL------SVINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLD------------------------------------------PSKG 129
             LRE L  +G LD                                          P+  
Sbjct: 253 PALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPA 312

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 313 VRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTE 372

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 373 L--STGIMVNIPAYSLLYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 430

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q PG  
Sbjct: 431 LARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPR 490

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D  
Sbjct: 491 NSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAG 546


>gi|148978885|ref|ZP_01815205.1| hypothetical protein VSWAT3_22280 [Vibrionales bacterium SWAT-3]
 gi|145962083|gb|EDK27369.1| hypothetical protein VSWAT3_22280 [Vibrionales bacterium SWAT-3]
          Length = 519

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 92/317 (29%), Positives = 156/317 (49%), Gaps = 11/317 (3%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            LG+       L ER+ + G D       S  FD  ++ A K FQ  HG+   G++   T
Sbjct: 206 RLGDKLSDKATLVERIALVGVDTSMIAVDSPRFDRDLQIATKAFQRMHGITADGIIGPDT 265

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +N+  D R+  L +N  R +     +     ++VN+P+  ++  E+G+    S V+V
Sbjct: 266 IKWINMGFDDRLTSLALNAERARLWPRNR--DSLIVVNVPSFDMKYWEDGEEVFESKVVV 323

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK-- 279
           GR  R+TP+L  +++ ++ NP W +P  I+ KD++  ++ D  YL+ +N  +ID      
Sbjct: 324 GRKSRKTPLLEIKLDSVILNPTWNVPWKIMVKDILPKVKADESYLETHNFQVIDGWRSME 383

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            V   E+DW +    +F +  RQ  G  NA+   K    ++   Y+HDTP   LFN+  R
Sbjct: 384 TVDTTEIDWQTINFNSFPYRMRQQAGSSNALGLYKFNTPNKRAIYLHDTPSKSLFNDDFR 443

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+RV +  +L   L            +++      T V+L   +PVH +Y +   
Sbjct: 444 AYSSGCIRVEHAEELAELLFATKVKKVPNQSDDLAP---NTKVRLKKRIPVHIIYQTVLF 500

Query: 398 PKDSIIQFRDDIYGLDN 414
            ++  IQ+R DIY  D 
Sbjct: 501 GEEG-IQYRGDIYQYDK 516


>gi|325293005|ref|YP_004278869.1| hypothetical protein AGROH133_06435 [Agrobacterium sp. H13-3]
 gi|325060858|gb|ADY64549.1| hypothetical protein AGROH133_06435 [Agrobacterium sp. H13-3]
          Length = 645

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 105/380 (27%), Positives = 163/380 (42%), Gaps = 30/380 (7%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSS- 108
           +       +   + S  P  S       +  +A  +         ++P    L  GNSS 
Sbjct: 263 KLAGLSPDIAAYLRSREP--SNAEYLALKAELARLRSEGDAANTVKVPADLVLKPGNSSG 320

Query: 109 ---VSVQRLRERL----------IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                V+ +  R           IISG        +  +   +   VK FQ  +GL   G
Sbjct: 321 DMASVVKAIEHRASPAFKAEHAAIISGY-----QQTPDYTPDLVDLVKAFQSENGLKADG 375

Query: 156 MVDSSTLEAMNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           ++  +T+ AM     D RI ++QV + +I+  L   +G RYVL+N PA       +G+  
Sbjct: 376 VIGRATVRAMVGESNDARIAKVQVAMEQIR-WLPADLGQRYVLINQPAFMAYYHNDGQEQ 434

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
               V+VG    QT      I  + FNPYW +P+SII  +M+  LR+DP YL      + 
Sbjct: 435 FGMKVVVGSKANQTYFFQDEIQTVEFNPYWGVPQSIIVNEMLPKLRRDPSYLDRLGYEV- 493

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
              G+ V    V+W          RQ P   NA+   KI F + +  YMHDTP    FN 
Sbjct: 494 QVGGRAVSSTSVNWFG-STNAVSVRQPPSSDNALGDLKILFPNAHAIYMHDTPAKSFFNR 552

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
            +R  + GC+R+ +   +   +L      S   + E +   K   V++  ++PV+  Y +
Sbjct: 553 DMRALSHGCIRLVDPRRMAAAVLGT----SVDKVNEQIAAGKNRAVQVPVKIPVYVAYFT 608

Query: 395 AWSPKDSIIQFRDDIYGLDN 414
           AW  K   +QF DD+Y  D+
Sbjct: 609 AWPDKAGKVQFFDDVYDRDS 628


>gi|190892061|ref|YP_001978603.1| hypothetical protein RHECIAT_CH0002473 [Rhizobium etli CIAT 652]
 gi|190697340|gb|ACE91425.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 636

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 100/388 (25%), Positives = 170/388 (43%), Gaps = 24/388 (6%)

Query: 55  FLARVDMGIDSDIPIISKE--TIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSV 109
            LAR+     + +   S +       +  +A  +     G   ++ I   + L  G+SS 
Sbjct: 252 KLARMSPDAGAYLTSRSPDGPQFEALKAELAKLRA-ADGGNEEQIVISLDKLLRPGDSSP 310

Query: 110 SVQRLRERLIISG--DLDPSKGLSVA-------FDAYVESAVKLFQMRHGLDPSGMVDSS 160
            V  + + L   G   L  +   ++A       +   + + V+ FQ   GL   G++  +
Sbjct: 311 EVANIVKALAKHGSETLKTNHAATLASYAGGRDYSPEIVALVEDFQKERGLKADGVIGQA 370

Query: 161 TLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           T+ AM        +I +L V + + +  L + +G RYV++N PA       +GK  L   
Sbjct: 371 TVRAMTGGDTNASKIDKLVVAMEQAR-WLPEDLGSRYVMINQPAYMAYYHNDGKEQLSMR 429

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           V+VG  + QT      I  + FNP+W +P+SII  +M+  LR DP YL      + +  G
Sbjct: 430 VVVGGKNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNG 488

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
             V    VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +R 
Sbjct: 489 HAVASSSVDWYG-STDNVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRA 547

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GCVR+ N   +   +L      +   + + + + +   V++  ++PV+  Y +AW  
Sbjct: 548 LSHGCVRLSNPRAMAAAVLGT----TVDDVAKQIASGQNHAVRVPQKIPVYVSYFTAWPN 603

Query: 399 KDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
           K+ ++++ DD+YG D             
Sbjct: 604 KEGVVEYFDDVYGRDAYVEKAFDATTKA 631


>gi|312883636|ref|ZP_07743361.1| hypothetical protein VIBC2010_12494 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368859|gb|EFP96386.1| hypothetical protein VIBC2010_12494 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 517

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 88/315 (27%), Positives = 164/315 (52%), Gaps = 10/315 (3%)

Query: 105 GNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+   +   L  RL + G D+   +     +DA +E A+K FQ  HG++  G++   T++
Sbjct: 202 GDRLENRAILLRRLEMVGIDIHRVRKDVTWYDASLEDAIKQFQSLHGIEVDGVIGPVTIK 261

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            +N+ V+ R+  L +N  RI+   +Q+   + ++VN+P+  L+    G+    S V+VGR
Sbjct: 262 WLNLSVNKRLSILAINAERIRYWPDQR--EQLIVVNVPSFHLKYWRLGETVFESKVVVGR 319

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--V 281
             R TP++ ++++ ++ NP W +P  I+ +D++  +++D  YL  +NI ++ + G    +
Sbjct: 320 RGRPTPVMTTKLHSLILNPTWNVPWRIMVEDIIPKVKKDKNYLVRHNIKIVPKWGASDFI 379

Query: 282 FVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
             E +DW+  +P  F ++  Q  G  NA+   K    +R   Y+HDTP   LF+   R  
Sbjct: 380 NPESIDWDRLKPSRFPYQMTQMSGDKNALGLFKFNTPNRRAIYLHDTPVKSLFDETQRAF 439

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGC+R+ +       LL+           E +       + L + +PVH +Y +AW  +
Sbjct: 440 SSGCIRIEHADLFADLLLESEGLVIEEEDNEPL--GSNQSIPLKSRIPVHIIYQTAWY-E 496

Query: 400 DSIIQFRDDIYGLDN 414
              + +R+DIY +D 
Sbjct: 497 GGNVHYREDIYRMDR 511


>gi|299136140|ref|ZP_07029324.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX8]
 gi|298602264|gb|EFI58418.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX8]
          Length = 604

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 101/375 (26%), Positives = 178/375 (47%), Gaps = 26/375 (6%)

Query: 75  IAQTEKAIAFYQDIL---SRGGWPELP------IRPLHLGNSSVSVQRLRERLIISGDLD 125
               +K +A Y ++    +    P LP       + +  G S  ++ +L  RL + GD+ 
Sbjct: 216 YVALQKGLAQYLELAKQQAANPQPPLPSLGATGAKSIVQGGSYAALPQLLARLQLEGDVT 275

Query: 126 PSKGL---------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
            +              +++A + +AVK +Q RHGL   G +  ST++++NVP+++R++QL
Sbjct: 276 ATDTDTAAASDTAGPRSYNAELVAAVKHYQQRHGLTADGKLTQSTIDSLNVPMEVRVQQL 335

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVG--RVDRQTPILHS 233
             +L R + + +  +  R VLVN+P   + A + +  V  +  ++ G  + +  TP+   
Sbjct: 336 NNSLERWRWMPDNFINPR-VLVNLPEFVVRAYDPDHSVAFKMKIVDGEAKGNHDTPMFVR 394

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQ-DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
            +  ++F PYW +P SII+K+++  +++    YL D    +    G  V       +  E
Sbjct: 395 SMRYVVFRPYWNVPPSIIKKELLPHIQRSGIGYLADKGYEVARNDGTVV--TGYTAHDIE 452

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +I RQ PG  N++   K  F +  + YMH TPE  LFN   R  + GCVR+ +   +
Sbjct: 453 HLRYIVRQKPGPKNSLGLVKFLFPNEYDVYMHSTPELPLFNLTRRDRSHGCVRLEHADQM 512

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRK-TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
             W+L+    W    I E +   K    V L T +PV   Y +A + +D+ I F  D+YG
Sbjct: 513 AAWVLQGQGDWDEDKISEAMNGDKDNKTVNLKTTLPVIIGYFTATADEDNSIHFFSDLYG 572

Query: 412 LDNVHVGIIPLPEDH 426
            D      +     +
Sbjct: 573 YDKALEAALDKGMPY 587


>gi|92116782|ref|YP_576511.1| peptidoglycan binding domain-containing protein [Nitrobacter
           hamburgensis X14]
 gi|91799676|gb|ABE62051.1| Peptidoglycan-binding domain 1 [Nitrobacter hamburgensis X14]
          Length = 775

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 101/432 (23%), Positives = 185/432 (42%), Gaps = 39/432 (9%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLA---RVDMGIDSDIPIIS 71
               ++          +H S +   I    H I  ++    +         +DS  P   
Sbjct: 304 LTASMMNYARQAQSGRMHWSQVGADIQYPEHPIDPEQVLTNVTTAKDASAALDSYNPP-- 361

Query: 72  KETIAQTEKAIAFYQD-----ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           ++   + ++ +A  +      ++     P L  R   +      V ++R +L ++     
Sbjct: 362 QKLYRELKQKLAELRKTSEGPVVEIAEGPSLVFRKNAV-MEDPRVPQIRAKLGVT----- 415

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMRIKK 185
                  FDA V +AV+ FQ R+ L P G+  ++T+ A+N P    +I  + VN+ R + 
Sbjct: 416 QNPDDAHFDADVAAAVREFQTRNHLQPDGIAGNNTIRALNGPRKGHQIDTIIVNMERWRW 475

Query: 186 LL----EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMF 240
           L        +G  Y ++NIP  +L+ +++G     + V+VG+     TP+L   +  I  
Sbjct: 476 LPRELGAPSLGNAYAILNIPDYTLKVMQHGAQLWSTRVVVGKPGIHATPLLTETMKYITV 535

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +P SII K+ +  L+QDP  L+   + +  ++   + +                Q
Sbjct: 536 NPTWNVPPSIIYKEYLPALQQDPTVLERMGLKLERDRNGGIHIS---------------Q 580

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL   
Sbjct: 581 PPGDRNALGRIRFNFPNKFLVYQHDTPDKYLFAKEKRAFSHGCMRVQNPDQYAATLLNIA 640

Query: 361 PTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
                Y  E++  +  RK   +K  T +PV+  Y +A+      +Q R D+YG D   + 
Sbjct: 641 LPQEHYTPEKIRGMYGRKEFDIKFPTPIPVNITYQTAFVDHAGKLQIRPDVYGSDAKMLA 700

Query: 419 IIPLPEDHPIDS 430
           ++  P+   +++
Sbjct: 701 LLRNPKGRDLEA 712


>gi|218709906|ref|YP_002417527.1| hypothetical protein VS_1919 [Vibrio splendidus LGP32]
 gi|218322925|emb|CAV19102.1| conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 518

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 93/317 (29%), Positives = 156/317 (49%), Gaps = 11/317 (3%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            LG+       L ER+ + G D          FD  +++A+K FQ  HGL   G+V   T
Sbjct: 205 RLGDPLSDKPILVERIALVGVDTSMIAVDFPVFDQDLQTAIKSFQRMHGLTDDGIVGPDT 264

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +N+  D R+  L +N  R++     +     ++VN+P+  ++  E+G+    S V+V
Sbjct: 265 IKWINMSFDERLTSLALNAERVRLWPRDR--DSLIVVNVPSFDMKYWEDGEEVFESKVVV 322

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--K 279
           GR  R+TP+L   ++ ++ NP W +P  I+ KD++  ++ D  YL+ +N  +ID     +
Sbjct: 323 GRKSRKTPLLEINLDSVILNPTWNVPWKIMVKDILPKVKADESYLETHNFQVIDGWRTME 382

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            V   ++DW +    +F +  RQ  G  NA+   K    ++   Y+HDTP   LFN+  R
Sbjct: 383 TVDTTDIDWQTINFNSFPYRMRQQAGSRNALGLYKFNTPNKRAIYLHDTPSKGLFNDDFR 442

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+RV +  +L   L        R    +       T V+L   +PVH +Y +   
Sbjct: 443 AYSSGCIRVEHAEELAELLFATKV---RKVPNQSNDLAPNTKVRLKKRIPVHIIYQTVLF 499

Query: 398 PKDSIIQFRDDIYGLDN 414
            +   IQ+R DIY  D 
Sbjct: 500 EEGG-IQYRGDIYQYDK 515


>gi|90425452|ref|YP_533822.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris BisB18]
 gi|90107466|gb|ABD89503.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris BisB18]
          Length = 730

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 106/432 (24%), Positives = 176/432 (40%), Gaps = 44/432 (10%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGID---SDIPIIS 71
               +L          +H S +   I    H I        +           S  P   
Sbjct: 256 LTASMLDYARQAQSGRMHWSQVSGDIQYPEHPIDPAEVLANVTAAADPSAALASYNPP-- 313

Query: 72  KETIAQTEKAIAFYQ---------DILSRGGWPELPIRPLH--LGNSSVSVQRLRERLII 120
            +   Q +  +A  +          I        +P R     +      V +LR +L I
Sbjct: 314 HKMYRQLKAKLAELRGQGDGPGAIQIAEGPALKYIPARKKQAAVEVDDPRVPQLRAKLGI 373

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVN 179
           S         S  +DA V +AV+ FQ    L  +G++D  T+ A+N P   R I  + VN
Sbjct: 374 S-----ENPDSTRYDAKVAAAVRKFQDSADLKETGVLDERTVTALNSPKSDRQIDTVIVN 428

Query: 180 LMRIKKLL----EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-DRQTPILHSR 234
           + R + L        +G  YV++NIP  +L+ +++G     + V+VG+  +  TP+L   
Sbjct: 429 MERWRWLPRVLGAPSLGDAYVILNIPDYTLKVMQHGAPVWTTRVVVGKPGNHATPLLTET 488

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           +  I  NP W +P SII  + +  L+QDP  L    + +   +   + +           
Sbjct: 489 MKYITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRDGSIHIS---------- 538

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
                Q PG+ NA+   +  F ++   Y HDTP+  LF+   R  + GC+RV+N      
Sbjct: 539 -----QPPGERNALGRIRFNFPNKFLVYQHDTPDKNLFSRDARAFSHGCMRVQNPDQYAA 593

Query: 355 WLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
            LL       RY  E++  +  +    +K AT +PV+  Y +A+      +Q R D+YG 
Sbjct: 594 TLLNIAMPNERYTPEKIRGMYGKSEIDLKFATPIPVNLTYQTAFVDDAGKLQTRKDVYGR 653

Query: 413 DNVHVGIIPLPE 424
           D   + I+  P+
Sbjct: 654 DAAMLAILRNPK 665


>gi|126663199|ref|ZP_01734197.1| hypothetical protein FBBAL38_07595 [Flavobacteria bacterium BAL38]
 gi|126624857|gb|EAZ95547.1| hypothetical protein FBBAL38_07595 [Flavobacteria bacterium BAL38]
          Length = 529

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 182/368 (49%), Gaps = 21/368 (5%)

Query: 70  ISKETIAQTEKAIA--------FYQDILSRGGWPELPIRPLH------LGNSSVSVQRLR 115
           I ++TIA T  A+           + +L     P +  + +       L ++   + +++
Sbjct: 162 IKEKTIASTFNALKPNHIVYKSLKKSLLEINKLPNISFQKIEIKNKIILNDTLPEMVKIK 221

Query: 116 ERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           +RL    D      L +  +D     AVK FQ RHGL   G++   T++A+N   + RI 
Sbjct: 222 KRLAYWKDYKNKDSLITWVYDTITYKAVKRFQARHGLAQDGVIGIGTIKALNTTKNERIE 281

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           Q+  NL R K      +G  Y++ NIP   L  V N     +  ++VG   R+TPIL S+
Sbjct: 282 QIFANLERWK-WYPFDLGEEYLIANIPEYMLNYVTNNDTVAKYRIVVGTKKRKTPILTSK 340

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++  +FNP W IP +II++D+     ++  Y    ++ + + KG EV  EE  WN  +  
Sbjct: 341 LSNFVFNPTWTIPPTIIKEDLTPAASKNRNYFPSRSLTIYNNKGTEVSPEE--WNPAKAN 398

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
           ++ + Q PG  N++   K+ F +R++ Y+HDT     F+   R  +SGCVRV   + L  
Sbjct: 399 SYRYVQKPGYNNSLGLVKLNFLNRHSVYLHDTNHRDYFSKTYRSLSSGCVRVETPLVLVK 458

Query: 355 WLL--KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
            +L   +   WS   I+ ++K  KT  V +   V ++  Y ++W  +++ +QFR+DIY L
Sbjct: 459 QILVKSNQEKWSGSEIDSIIKLEKTKTVSIKDTVNIYIFYWTSWF-ENNKLQFREDIYDL 517

Query: 413 DNVHVGII 420
           D      +
Sbjct: 518 DKSLYEKL 525


>gi|217978718|ref|YP_002362865.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217504094|gb|ACK51503.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 629

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 95/328 (28%), Positives = 153/328 (46%), Gaps = 24/328 (7%)

Query: 97  LPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +P  P L +G     V  +R RL + G     +  ++ +D  V SAV  FQ  +GL  SG
Sbjct: 322 IPTGPTLKVGMRDPRVPLIRSRLSLDG--REGEPENLVYDTQVASAVADFQKANGLPGSG 379

Query: 156 MVDSSTLEAMNVPVDLRIRQ-LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            +++ T+  ++     R+   +  N+ R +  + + MG   + VNIP   +  +ENG V 
Sbjct: 380 QLNARTIALLSGGDQSRVEAEILANMERWR-WMPRDMGESRIEVNIPDYEVSVIENGAVI 438

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
            ++ V+VG+ D  TP+  + +  ++ NPYW +P+SII+K+MM  +  DP YL       +
Sbjct: 439 SQNRVVVGKEDTPTPVFSNTMQFLIVNPYWTVPQSIIRKEMMPKIAADPNYLHRMGYEAV 498

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
            + GK                   RQ PG+ NA+   K  F +    Y+HDTP   LF  
Sbjct: 499 WKNGK----------------LGVRQPPGERNALGRIKFMFPNDYAVYLHDTPSRALFEQ 542

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
             R  + GCVRV +       +L     WS   +++++   K   V LA  +P+H  Y +
Sbjct: 543 HKRAFSHGCVRVDDPFRFAQSVLG--KGWSEERVQKLI-GGKERYVHLAKPLPIHLEYFT 599

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           A       +Q  +DIYG        + L
Sbjct: 600 AKVDPYGQLQLSEDIYGFSRKVRAALGL 627


>gi|209694858|ref|YP_002262786.1| hypothetical protein VSAL_I1327 [Aliivibrio salmonicida LFI1238]
 gi|208008809|emb|CAQ79012.1| putative exported protein [Aliivibrio salmonicida LFI1238]
          Length = 512

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 187/379 (49%), Gaps = 25/379 (6%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR---------GGWPELPIRPLHLG 105
            + +V+   + D        + Q +     YQD+ +R            P+L    L   
Sbjct: 134 LIEKVNQHFEDDTLTA---LVNQLKPQSKQYQDLYTRLYRYYDPYHQEAPKLYSSRLLKP 190

Query: 106 NSSVSVQRLRERLIISGDLDPSK------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           N  +  + L  RL ISG+L+  +           ++  + + VK FQ RHGL   G+V  
Sbjct: 191 NQDIPYKSLVYRLQISGELNEEQIHYFLSQEGDKYNNELVNVVKSFQKRHGLVVDGIVGK 250

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            TL  +N+  + R+R + +N+ R++    +    R+VLVNIP+  +     G++  +S V
Sbjct: 251 RTLYWLNMSANERVRIMALNIQRLRLW--ENKNARFVLVNIPSYEMGYWLKGELVFKSKV 308

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK-- 277
           IVG+ +R+TP+  +R++ I+FNP W +P  I+++D++    ++  YL  +N  ++     
Sbjct: 309 IVGKPERKTPLFTTRLDSIVFNPNWKVPTKIMKEDILPKALENQDYLLTHNYEVLPSWLS 368

Query: 278 GKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
            + +  E ++W +    NF +  RQ  G  NA+   K    +RN  Y+HDTP   LFN  
Sbjct: 369 DEVIPFESIEWETMTVDNFPYKLRQKSGNANALGRYKFNTPNRNAIYLHDTPSRSLFNKQ 428

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            R  +SGC+RV    +    L+K++  ++        +  KT  V L+ ++ V+ +Y +A
Sbjct: 429 HRAYSSGCIRVEKASEFAQLLMKES-HFTAKDYAGYHRLPKTNTVGLSQKIAVYTIYQTA 487

Query: 396 WSPKDSIIQFRDDIYGLDN 414
           W  +   IQFR+D+Y  D 
Sbjct: 488 WVDEADTIQFRNDVYRYDE 506


>gi|84393105|ref|ZP_00991870.1| Uncharacterized protein conserved in bacteria [Vibrio splendidus
           12B01]
 gi|84376262|gb|EAP93145.1| Uncharacterized protein conserved in bacteria [Vibrio splendidus
           12B01]
          Length = 512

 Score =  363 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 93/317 (29%), Positives = 156/317 (49%), Gaps = 11/317 (3%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            LG+       L ER+ + G D          FD  +++A+K FQ  HGL   G+V   T
Sbjct: 199 RLGDELSDKAVLVERIALVGVDTSMIAVDFPEFDRDLQTAIKSFQRMHGLTDDGIVGPDT 258

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +N+  D R+  L +N  R++     +     ++VN+P+  ++  E+G+    S V+V
Sbjct: 259 IKWINMSFDDRLTSLALNAERVRLWPRDR--DSLIVVNVPSFDMKYWEDGEEVFESKVVV 316

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--K 279
           GR  R+TP+L   ++ ++ NP W +P  I+ KD++  ++ D  YL  +N  +ID     +
Sbjct: 317 GRKSRKTPLLEINLDSVILNPTWNVPWKIMVKDILPKVKADESYLDTHNFQVIDGWRTME 376

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            V   E+DW +    +F +  RQ  G  NA+   K    ++   Y+HDTP   LFN+  R
Sbjct: 377 TVDTTEIDWQTINFNSFPYRMRQQAGSRNALGLYKFNTPNKRAIYLHDTPSKGLFNDDFR 436

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+RV +  +L   L            +++      T V+L   +PVH +Y +   
Sbjct: 437 AYSSGCIRVEHAEELAELLFATKVRKVPNQSDDLAP---NTKVRLKKRIPVHIIYQTVLF 493

Query: 398 PKDSIIQFRDDIYGLDN 414
            +   IQ+R DIY  D 
Sbjct: 494 EEGG-IQYRGDIYQYDK 509


>gi|315179999|gb|ADT86913.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
          Length = 517

 Score =  363 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 96/358 (26%), Positives = 164/358 (45%), Gaps = 12/358 (3%)

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG 122
           ID   P        Q   A  +   I  +     +  R    G+     + L +RL +  
Sbjct: 162 IDEYTP--QDAAYRQLVSAYRYLSQIEPQMLSVYVQARLKRPGDKLEDRRTLIQRLSLVN 219

Query: 123 -DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
            D+         +D  +   VK FQ  HGL   G++   TL+ +N+ V  R+  L +N  
Sbjct: 220 IDVAGISDNVTWYDNSLVEPVKQFQKMHGLKIDGIIGPDTLKWLNMKVPERLALLALNAE 279

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++    Q      ++VN+P  +L+   +GK    S V+VGRV R TP++ ++++ ++ N
Sbjct: 280 RMRLWSTQD--DTVIVVNVPGYNLKYWYSGKPVFESKVVVGRVTRPTPVMSTKLDSLILN 337

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEPPNFIF- 298
           P W +P  I+ +D++ + ++D  YL  ++I +I+     + +    +DW +  P  F + 
Sbjct: 338 PTWKVPHKIMVEDILPMTKRDASYLSRHHIDIIESWKSDQTLDPALIDWQNVNPKTFPYR 397

Query: 299 -RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ  G  NA+   K    ++   Y+HDTP   LFN+  R  +SGC+RV +       LL
Sbjct: 398 MRQQAGNQNALGLYKFNTPNKRAIYLHDTPSKHLFNHPTRAFSSGCIRVEHADQFATALL 457

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           +         I           + L   +PVH +Y + W  +   + +RDDIY LD +
Sbjct: 458 ETQGINHSELIPNADDA--NRAIPLKKRIPVHIIYQTVWY-EGGEVHYRDDIYRLDRI 512


>gi|86148447|ref|ZP_01066737.1| Uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
 gi|85833744|gb|EAQ51912.1| Uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
          Length = 512

 Score =  363 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 11/317 (3%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            LG+       L ER+ + G D          FD  ++SA+K FQ  HGL   G+V   T
Sbjct: 199 RLGDELSDKTILVERIALVGVDTSMIAVDFPVFDQDLQSAIKSFQRMHGLTDDGIVGPDT 258

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +N+  D R+  L +N  R++     +     ++VN+P+  ++  E+G+    S V+V
Sbjct: 259 IKWINMSFDERLTSLALNAERVRLWPRDR--DSLIVVNVPSFDMKYWEDGEEVFESKVVV 316

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--K 279
           GR  R+TP+L   ++ ++ NP W +P  I+ KD++  ++ D  YL+ +N  +ID     +
Sbjct: 317 GRKSRKTPLLEINLDSVILNPTWNVPWKIMVKDILPKVKADESYLETHNFQVIDGWRTME 376

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            V   ++DW +    +F +  RQ  G  NA+   K    ++   Y+HDTP   LFN+  R
Sbjct: 377 TVDTTDIDWQTINFNSFPYRMRQQAGSRNALGLYKFNTPNKRAIYLHDTPSKGLFNDDFR 436

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+RV +  +L   L        R    +       T V+L   +PVH +Y +   
Sbjct: 437 AYSSGCIRVEHAEELAELLFATKV---RKVPNQSNDLAPNTKVRLKKRIPVHIIYQTVLF 493

Query: 398 PKDSIIQFRDDIYGLDN 414
            +   IQ+R DIY  D 
Sbjct: 494 EEGG-IQYRGDIYQYDK 509


>gi|312113144|ref|YP_004010740.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218273|gb|ADP69641.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 725

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 93/379 (24%), Positives = 161/379 (42%), Gaps = 36/379 (9%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           E   +  +A+         G     +P       G+    +  +R+RL    D       
Sbjct: 288 EQFKRLRQALIALGKTTDSGTSSIRIPAGKTFKPGDDDAQIALIRKRLNAGLD----APR 343

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN----VPVDLRIRQLQVNLMRIKKL 186
              +D  +  AV  FQ   GL+ +G+VD     A+N      VD +  +L VN+ R +  
Sbjct: 344 DTIYDEALLVAVNRFQKERGLNVNGIVDKKLRAALNEGAGGSVDEKKMRLIVNMERWR-W 402

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           +   +G  YV  +IP  +    + G+V  +  ++VG+   QTP   +++  ++FNP W +
Sbjct: 403 MPDDLGEFYVWNSIPEQTTRVFDRGRVAFQERIVVGKPTSQTPSFSAKMQFVIFNPEWGV 462

Query: 247 PRSIIQKDMMALLRQ----DPQ---------------------YLKDNNIHMIDEKGKEV 281
           P  I   ++   LR+     P                       L+      +   G++V
Sbjct: 463 PDGIKANEIAPKLRRAAPSGPSDDLFSFLGGRSGGGGGGGASSVLQRLGGLRVTYNGRDV 522

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
             + VDW+  +   + F Q  G  NA+   K  F ++++ YMHDTPE  LF +  R  + 
Sbjct: 523 DPDSVDWSRVDARRYSFIQPAGPRNALGVVKFRFPNKHDVYMHDTPEKSLFGSATRAFSH 582

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GC+R +N +     +L      +   I   +++ +TT  KL   +PVH VY +A   +  
Sbjct: 583 GCMRTQNPVRFAEVILAYDNGTTPEQIRRQIESGQTTENKLTKTIPVHMVYFTAAPDEKG 642

Query: 402 IIQFRDDIYGLDNVHVGII 420
            I++  D+YGLD      +
Sbjct: 643 DIRYFSDLYGLDARVASAL 661


>gi|15888928|ref|NP_354609.1| hypothetical protein Atu1615 [Agrobacterium tumefaciens str. C58]
 gi|15156702|gb|AAK87394.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 642

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 103/375 (27%), Positives = 162/375 (43%), Gaps = 20/375 (5%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSV 109
           +       V   + S  P  S       +  +A  +          +P    L  GNSS 
Sbjct: 260 KLAGLSPDVAAYLRSREP--SSAEYLALKAELARLRGEGDTAHTVRVPADLVLKPGNSSA 317

Query: 110 S----VQRLRERLIISGDLDPSKGLSVA-----FDAYVESAVKLFQMRHGLDPSGMVDSS 160
                V+ +  R   +   + +  +S       +   +   VK FQ  +GL P G++  +
Sbjct: 318 DMASVVKAIEHRASPAFKAEHAAIMSAYQQTPDYTPDLVDLVKAFQSENGLKPDGVIGRA 377

Query: 161 TLEAMNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           T+ AM     D +I ++QV + +++  L   +G RYV +N PA       +G       V
Sbjct: 378 TVRAMVGESNDAKIAKVQVAMEQVR-WLPADLGQRYVFINQPAFMAYYHNDGVEQFGMKV 436

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           +VG    QT      I  + FNPYW +P+SII  +M+  LR+DP YL      +    G+
Sbjct: 437 VVGSKANQTYFFQDEIQTVEFNPYWGVPQSIIVNEMLPKLRRDPSYLDRLGYEV-QVGGR 495

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            V    V+W          RQ P   NA+   KI F + +  YMHDTP    FN  +R  
Sbjct: 496 AVSSSSVNWYG-STNAVSVRQPPSSDNALGDLKILFPNAHAIYMHDTPAKSFFNRDMRAL 554

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           + GC+R+ +   +   +L      S   + E +   K   V++  +VPV+  Y +AW  K
Sbjct: 555 SHGCIRLVDPRRMAAAVL----GSSVDKVNEQIAAGKNRAVQVPEKVPVYVAYFTAWPDK 610

Query: 400 DSIIQFRDDIYGLDN 414
           D  +QF DD+Y  D+
Sbjct: 611 DGKVQFFDDVYDRDS 625


>gi|86748553|ref|YP_485049.1| hypothetical protein RPB_1428 [Rhodopseudomonas palustris HaA2]
 gi|86571581|gb|ABD06138.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 718

 Score =  363 bits (932), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 107/429 (24%), Positives = 175/429 (40%), Gaps = 47/429 (10%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE- 73
               ++          +H S     I    H I      + LA V    D+   + S   
Sbjct: 243 LTESMMDYARQAQSGRMHWSQAGSDIQYPEHPIDPA---DVLASVTTAKDASAALGSYNP 299

Query: 74  ---TIAQTEKAIAFYQ--------DILSRGGWPELPIRPLH--LGNSSVSVQRLRERLII 120
                 + +K +A  +         I        +P R     +      V +LR +L I
Sbjct: 300 PHRLYKELKKKLAELRGESDGPVLKIAEGETLKFVPARKKQAAVTMDDPRVPQLRAKLGI 359

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVN 179
           + D D     S  +DA V  AV+ FQ    L P+G++D  T++A+N P   R I  + VN
Sbjct: 360 TEDAD-----STTYDAKVAEAVRKFQRGADLKPTGILDDRTVKALNTPKRDRTIDTIMVN 414

Query: 180 LMRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-DRQTPILHSR 234
           + R + L  Q     +G  YV++N+P  +L+ + NG     + V++G+     TP+L   
Sbjct: 415 MERWRWLPRQLGAASLGDAYVILNVPDYTLKLMHNGAQVWTTRVVIGKPGKHATPLLTET 474

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           +  I  NP W +P SII  + +  L QDP  L    + M   +   + +           
Sbjct: 475 MKYITVNPTWNVPPSIINNEYLPALAQDPTVLDRMGLKMSRNRDGSIHIS---------- 524

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
                Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N      
Sbjct: 525 -----QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAREERAFSHGCMRVQNPDQYAA 579

Query: 355 WLLK---DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
            LL        ++   I   +  R    +   T +PV+  Y +A+   D  +Q R D+YG
Sbjct: 580 ALLNIAMPDKDYTPAKI-RSMYGRSEVNLNFPTPIPVNITYQTAFVDDDGKLQLRKDVYG 638

Query: 412 LDNVHVGII 420
            D   + ++
Sbjct: 639 RDARMLALL 647


>gi|119945331|ref|YP_943011.1| cell wall degradation protein [Psychromonas ingrahamii 37]
 gi|119863935|gb|ABM03412.1| cell wall degradation protein [Psychromonas ingrahamii 37]
          Length = 513

 Score =  363 bits (932), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 102/395 (25%), Positives = 182/395 (46%), Gaps = 26/395 (6%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP 95
           +   +       ++  F+    ++ +     +  IS +           YQ+IL     P
Sbjct: 129 IKNSLKAPSKESIDAFFNTGSPQIRLRYLQRLSPISAQQSQ-------LYQNILKLKNKP 181

Query: 96  E--LPIRPL----HLGNSSVSVQRLRERLIISGDLDPSKGL------SVAFDAYVESAVK 143
                   L     +G+S    + L  RL ISG+L   +           +   +   ++
Sbjct: 182 VQIFDAVKLTEFAKIGDSLAQKKVLLSRLEISGELSSQEKQQIELENHQGYSQKLGEIIR 241

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            FQ+RHGL+P G++  +TL  +N+    R+R + +N++R +         R V++NIP  
Sbjct: 242 SFQIRHGLEPDGIIGKNTLYWLNISRQERVRLMALNILRQQLWTMDN--TRKVIINIPDY 299

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
           ++E  E  +    S VIVG+  R+TP+  +++N I+FNP W +P  I+++D++  +  D 
Sbjct: 300 TMEYWEEDQKIFESKVIVGQTKRKTPLFSAQLNAIVFNPRWNVPTIIMREDILPKVLLDI 359

Query: 264 QYLKDNNIHMI--DEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRN 319
            YL  ++  +I   +  K +  E ++W      NF +  RQ  G+ NA+   K    + N
Sbjct: 360 NYLSRHSYEIIENYQSQKVIDAETINWKLITVHNFPYRLRQKSGENNALGLYKFNTPNNN 419

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
           + Y+HDTP   LF    R  +SGC+RV+      ++L+ D   +            +T+ 
Sbjct: 420 SIYLHDTPAKNLFEKQDRAFSSGCIRVQKAEQFALFLM-DKSGYPLERYNIHHNVPETSS 478

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           V L  ++ V+ VY + W  +    QFR+DIY  D 
Sbjct: 479 VSLKKKITVYSVYRTVWVDQFGFTQFRNDIYHYDK 513


>gi|116252447|ref|YP_768285.1| hypothetical protein RL2700 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115257095|emb|CAK08189.1| conserved hypothetical exported protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 637

 Score =  362 bits (930), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 100/388 (25%), Positives = 170/388 (43%), Gaps = 24/388 (6%)

Query: 55  FLARVDMGIDSDIPIISKE--TIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSV 109
            L+R+   + + I   S +       +  +A  +     G    + +   R L  G+SS 
Sbjct: 253 KLSRMSPDVGAYIASRSPDSPQFQALKAELAKLRA-ADGGNEERIVVSLDRLLRPGDSSP 311

Query: 110 SVQRLRERLIISGDLD---------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  + + +   G             +   S+ +   + S V+ FQ   GL P G++  +
Sbjct: 312 EIANIVKAIGKHGSETLNTDHAATLAAYAGSIDYSPDIVSLVEDFQKERGLKPDGVIGQA 371

Query: 161 TLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           T+ AM        +I +L V + + +  L + +G RYV++N PA  +    +GK  L   
Sbjct: 372 TVRAMTGGDTNASKIDKLVVAMEQAR-WLPEDLGSRYVMINQPAYMVYYHNDGKEQLSMR 430

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           V+VG  + QT      I  + FNP+W +P+SII  +M+  LR DP YL      + +  G
Sbjct: 431 VVVGGKNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNG 489

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
             V    VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +R 
Sbjct: 490 HAVASSSVDWYG-STNNVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRA 548

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GCVR+ +   +   +L      +   I + + + +   V++  ++PV+  Y +AW  
Sbjct: 549 LSHGCVRLADPRAMAAAVLGT----TVDDIAKQIASGQNHAVRVPQKIPVYVSYFTAWPN 604

Query: 399 KDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
           KD ++++ DD+YG D             
Sbjct: 605 KDGVVEYFDDVYGRDGYVDKAFDATSKA 632


>gi|209884231|ref|YP_002288088.1| peptidoglycan-binding domain 1 [Oligotropha carboxidovorans OM5]
 gi|209872427|gb|ACI92223.1| peptidoglycan-binding domain 1 [Oligotropha carboxidovorans OM5]
          Length = 712

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 93/323 (28%), Positives = 150/323 (46%), Gaps = 28/323 (8%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V  LR +L I+            +DA V +AV+ FQ  +GL  +G++D  TL A+
Sbjct: 343 MEDARVPALRAKLGIT-----ENASDTHYDATVATAVRKFQAANGLKATGVLDKQTLAAL 397

Query: 166 NVPVDLR-IRQLQVNLMRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           N P + R I  ++VN+ R + L        +G  YV++NIP  SL+ + NG    ++ V+
Sbjct: 398 NGPKNDRKIDIVRVNMERWRWLPRDLGAKALGDAYVVLNIPDYSLKLMHNGAPVWKTRVV 457

Query: 221 VGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           VG+     TP L   +  I  NP W +P SII  + +  L+QDP  L+   + +      
Sbjct: 458 VGKPGKHATPELTETMKYITVNPTWNVPPSIIYNEYLPALQQDPTVLERMGLKLQRNPDG 517

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            + +                Q PG+ NA+   +  F ++   Y HDTP+  LF    R  
Sbjct: 518 TIRIS---------------QPPGERNALGRIRFNFPNKFLVYQHDTPDKHLFAKTERAF 562

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWS 397
           + GC+RV+N       LL        Y  E++  +  R    +   T +PV+ VY +A+ 
Sbjct: 563 SHGCMRVQNPDQYAANLLSIALPKDHYTPEKIRGMYGRSEININFPTPIPVNIVYHTAFV 622

Query: 398 PKDSIIQFRDDIYGLDNVHVGII 420
               +++FR DIYG D   + ++
Sbjct: 623 DDAGVLEFRKDIYGRDARMISLL 645


>gi|241204955|ref|YP_002976051.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858845|gb|ACS56512.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 637

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 99/388 (25%), Positives = 169/388 (43%), Gaps = 24/388 (6%)

Query: 55  FLARVDMGIDSDIPIISKE--TIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSV 109
            LAR+   + + I   S +       +  +A  +     G    + +   R L  G+SS 
Sbjct: 253 KLARLSPDVGAYIASRSPDSSQFQALKAELAKLRA-ADGGNEERIVVSLDRLLRPGDSSP 311

Query: 110 SVQRLRERLIISGDLD---------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  + + +   G             +   S+ +   + S V+ FQ   GL   G++  +
Sbjct: 312 EIANIVKAIGKHGSETLRTDHAATLAAYAGSIDYSPDIVSLVEEFQKERGLKADGVIGQA 371

Query: 161 TLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           T+ AM        +I +L V + + +  L + +G RYV++N PA  +    +GK  L   
Sbjct: 372 TVRAMTGGDTNASKIDKLIVAMEQAR-WLPEDLGSRYVMINQPAYMVYYHNDGKEQLSMR 430

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           V+VG  + QT      I  + FNP+W +P+SII  +M+  LR DP YL      + +  G
Sbjct: 431 VVVGGKNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNG 489

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
             V    VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +R 
Sbjct: 490 HAVASSSVDWYG-STNNVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRA 548

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GCVR+ +   +   +L      +   + + + + +   V++  ++PV+  Y +AW  
Sbjct: 549 LSHGCVRLADPRAMAAAVLGT----TVDDVAKQIASGQNHAVRVPQKIPVYVSYFTAWPN 604

Query: 399 KDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
           KD ++++ DD+YG D             
Sbjct: 605 KDGVVEYFDDVYGRDAYVDKAFDATTKA 632


>gi|154246011|ref|YP_001416969.1| peptidoglycan binding domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154160096|gb|ABS67312.1| Peptidoglycan-binding domain 1 protein [Xanthobacter autotrophicus
           Py2]
          Length = 672

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 97/362 (26%), Positives = 156/362 (43%), Gaps = 37/362 (10%)

Query: 83  AFYQDILSR-----GGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           A Y+ + ++     G  P +    P   +  G S   +  LR RL ++G          A
Sbjct: 318 AGYRALKAQLARVTGQTPGVVAVPPGAQIRPGASDPRIPTLRTRLGVTG----RPADDNA 373

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV----DLRIRQLQVNLMRIKKLLEQ 189
           +D  +  AVK FQ    + P+G+V  ST+ A+N             +  N+ R +  L +
Sbjct: 374 YDPALVDAVKAFQEASKIKPTGIVGPSTIAALNAGATPGGGSLKSDVIANMERWR-WLPR 432

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +G  YV+VNIP   +   ++G     + V+VG+ +  TP+L   +  I+ NP W IP S
Sbjct: 433 DLGESYVMVNIPEFLVRIYQSGHEIHETRVVVGKPETPTPLLSREMQYIVVNPAWNIPPS 492

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I + +MM LLR DP  L    I ++                     + FRQ P + NA+ 
Sbjct: 493 IARNEMMPLLRSDPSALSRRGIEVVRNGS---------------GGYSFRQVPSERNALG 537

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK---DTPTWSRY 366
             K  F + ++ Y+HDTP   LF N  R  + GCVRV   +     +         W++ 
Sbjct: 538 RIKFMFPNDHSVYLHDTPSKALFQNDRRAYSHGCVRVYEPLKFGEVIFNLGLPNDHWTQT 597

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
            I ++  +     V L    PVH VY +        +  R+D+YG++     ++ L    
Sbjct: 598 RIGKMFGS-SERYVNLKQRFPVHIVYFNVVVDDAGRLAVREDLYGINAETKTLLGLNGKQ 656

Query: 427 PI 428
            I
Sbjct: 657 RI 658


>gi|83859233|ref|ZP_00952754.1| hypothetical protein OA2633_12550 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852680|gb|EAP90533.1| hypothetical protein OA2633_12550 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 506

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 113/371 (30%), Positives = 167/371 (45%), Gaps = 14/371 (3%)

Query: 55  FLARVDMGIDSDIPIISK--ETIAQTEKAIAFYQDILSRGGWPEL--PIRPLHLGNSSVS 110
             AR   GI   +  ++            +     ++     P L  P   L  G+    
Sbjct: 115 AQAREGQGIYESLEALAPAHPDYQALRSELVRRLTLVEA---PILVPPGEALSRGDQGPR 171

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  LR RL   G L         FD  +ESAV  FQ RH L   G    STL  +N    
Sbjct: 172 VDALRARLAQLGLLAGPVAAGAPFDGRLESAVMRFQTRHNLAADGEAGPSTLSELNAGDA 231

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            RI Q++ NL R +  L  ++G R++ VNI    LEA ENG V      ++G+   +TP+
Sbjct: 232 RRINQIRANLERWR-WLPAELGERHIRVNIADYRLEAWENGVVARTHETMIGQRYSRTPV 290

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWN 289
               ++ I  NPYW+ P  + Q+  +   R +P Y       ++D + G  V   + DW 
Sbjct: 291 FSEDMSIIEINPYWLTPSGLGQR-WLRTFRTNPAYALSQGYRLVDLDTGARVDPYQADWA 349

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
           S     +   Q PG  NAM   K  F + +N Y+HDTP   LF N  R ++SGCVRV + 
Sbjct: 350 S---RRYRVIQAPGPNNAMGRVKFLFPNVHNVYIHDTPHRELFANAQRDDSSGCVRVEHP 406

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
            +L +W+L     WS   + E   +  T  ++L   VPVH +Y +A S +   ++F  D+
Sbjct: 407 EELAIWILS-AEGWSAQAVREAFDSGDTRRIRLRHVVPVHILYFTAVSDEMGRVRFIHDV 465

Query: 410 YGLDNVHVGII 420
           Y  D   +  +
Sbjct: 466 YDRDERLIAAL 476


>gi|294140768|ref|YP_003556746.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12]
 gi|293327237|dbj|BAJ01968.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12]
          Length = 482

 Score =  362 bits (929), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 115/417 (27%), Positives = 186/417 (44%), Gaps = 21/417 (5%)

Query: 6   KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS 65
           +IN+I     +Y    + L    + +      +       +I ND    F+A +      
Sbjct: 77  QINEIKITDSLYSHALLDLLAHIRSVKGGGEADDEVRLLEAINNDELAEFIASI------ 130

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD 125
              + S + +++  + I  Y+  L    WP +      LG SS  VQRLR  L   GDL+
Sbjct: 131 ---LPSYDEVSKIRRMIRVYKSQLDVN-WPTITQVNFKLGQSSKQVQRLRWMLTALGDLE 186

Query: 126 PS---KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
            S   +     +D  V   +K FQ RHG+  SG +D ST   +N+    R+ Q+Q NL R
Sbjct: 187 NSELTRYRESIYDPMVIHGIKAFQRRHGIRVSGELDESTALVLNISPQRRVIQMQQNLWR 246

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
              ++      +Y+ +NIP  SL+    G++ L   VIVG+    TP++ +R+ R+  NP
Sbjct: 247 W-LMMPPSPPKKYIKINIPDYSLQLFVLGELDLSMKVIVGKPSSPTPVMMTRVTRMTINP 305

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP-----PNFI 297
           YW  P SII+ +++ L   +P YL      +      E+ V ++    P+        + 
Sbjct: 306 YWTPPSSIIRSELLPLNSTEPGYLNHKGFELHAVGKNEISVVKLTNMEPKQLKGLLTEYR 365

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
             Q PGK NA+   +    +  + Y+HDTP   LF+      + GC+R+   + L  +L+
Sbjct: 366 LVQAPGKDNALGQVRFTIPNTQSIYLHDTPAKNLFDGEHLALSHGCIRLEKALALSEYLI 425

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                     I+  +   KT  V L   +P+   Y +AW      +Q R DIY LD 
Sbjct: 426 SIHE--DSKEIQVALSGSKTRYVSLPDPMPIFITYQTAWVDNRGKLQLRPDIYHLDR 480


>gi|157375588|ref|YP_001474188.1| peptidoglycan binding domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157317962|gb|ABV37060.1| peptidoglycan-binding domain 1 protein [Shewanella sediminis
           HAW-EB3]
          Length = 465

 Score =  361 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 177/383 (46%), Gaps = 7/383 (1%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP 95
           L             +R D+    +     S  P  S          + +   +     W 
Sbjct: 78  LKYFWQNKNIPNDANRLDD-TEDLYQRAISLEPTSSD--YLPVSNRLRYLLWLSEHYPWK 134

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            L I   L  G+   S+  +  RL + GDLD     +   +  + +++  FQ RHGL   
Sbjct: 135 PLVIGGWLKEGDYHKSIPEISFRLNMLGDLDSYDRNNKQLNRTLATSLLRFQRRHGLKQD 194

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            ++   TL  +N     R R L  N ++    L   +  R++L+NIPA  +  V++ ++ 
Sbjct: 195 AIIGPETLRWLNASPKNRARLLANNFLKKSSYLA-SLDSRFLLINIPAFEMVLVDHDEIQ 253

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           L+S VIVG+  RQTP+L S+I+ ++ NP W +PR ++ +D++  +R++  Y+   N  + 
Sbjct: 254 LKSRVIVGKPYRQTPMLSSQISNVVLNPSWRVPRRLLWRDLLPKVRENGSYITQRNFDVF 313

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           D KG  +     +W       F +R  Q PG+ N +   K  F +  N Y+HDT +  LF
Sbjct: 314 DAKGVIIEKSPDEWQELAQGRFPYRLVQRPGEENTLGRYKFYFANDYNVYLHDTVDKSLF 373

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
               R  +SGC+RV N+  L  W+  +     +  ++  V+ +KT    L   + VH VY
Sbjct: 374 EESNRALSSGCIRVENVESLANWMASNLVRDKQTWVDMQVERQKTQWFSLDDSLAVHLVY 433

Query: 393 ISAWSPKDSIIQFRDDIYGLDNV 415
            +AW   +   QFR+DIY  ++ 
Sbjct: 434 WTAWIDSEGDSQFRNDIYNQNST 456


>gi|163759687|ref|ZP_02166772.1| hypothetical protein HPDFL43_10047 [Hoeflea phototrophica DFL-43]
 gi|162283284|gb|EDQ33570.1| hypothetical protein HPDFL43_10047 [Hoeflea phototrophica DFL-43]
          Length = 619

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 94/334 (28%), Positives = 146/334 (43%), Gaps = 21/334 (6%)

Query: 102 LHLGNSSVSV----QRLRERLIISGDLDPSKGL-------SVAFDAYVESAVKLFQMRHG 150
           L  G S+  +      + ++   S +L     L          +D  +   VK FQ   G
Sbjct: 286 LKPGQSNPELSNVMAAISKK--ASDELKAEHALLFASYAGKPEYDEELVQLVKDFQKELG 343

Query: 151 LDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           L P G+V  +T  AM  +    +I ++++ + R +  L   +  R V +N PA +     
Sbjct: 344 LKPDGVVGPATRRAMVGITNADKIEKVRLAMERAR-WLPGVLASRRVFINQPAYTASYYN 402

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
            GK  L   V+VG+   QT      I  + FNPYW +P+SII  +M+  LR DP YL  +
Sbjct: 403 GGKQELSMRVVVGKRSNQTYFFDDEIELVEFNPYWGVPQSIIFNEMVPKLRNDPGYLDRS 462

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPP-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
              +    GK V    V+W++         RQ PG  NA+   KI F + +  YMHDTP 
Sbjct: 463 GYEVTIG-GKRVSSSNVNWSAVGAGSRVGVRQRPGSSNALGELKIMFPNSHAIYMHDTPS 521

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  + GC+R+++   +   +L      +   I   +   +  PV +   +PV
Sbjct: 522 KSLFERDTRAFSHGCIRLQDPRAMAAKVLGT----TVEDIGSYIAGGQHKPVDVPENIPV 577

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           H  Y +AW  +   + +  DIYG D      I  
Sbjct: 578 HVAYFTAWPNETGAVSYYADIYGRDGYLRKAIDA 611


>gi|146300086|ref|YP_001194677.1| hypothetical protein Fjoh_2331 [Flavobacterium johnsoniae UW101]
 gi|146154504|gb|ABQ05358.1| Uncharacterized protein [Flavobacterium johnsoniae UW101]
          Length = 519

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 181/348 (52%), Gaps = 26/348 (7%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
            +   + +  +  Y+ +     W  +    P + L     S ++ ++R RL + GDL   
Sbjct: 182 YDQYYKLQGVLKQYKKLEKSSKWKPIVAETPYKDLRPDAVSPTIAQVRTRLYLLGDLK-Q 240

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
              S  +D  +   V  +++R+G  P+ ++    ++ MN+PV  +++ L +N+ RI+ + 
Sbjct: 241 DSKSDFYDRELMDGVMKYKVRNGFKPNYILAEEHIKEMNIPVSDKVKTLMLNMERIRAIS 300

Query: 188 EQ-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            +      YVLVN+P+  L  V+NGK+ L S+V VG    +T I + +I+RI+F+PYW +
Sbjct: 301 PELVNNDEYVLVNVPSYELIYVKNGKIELTSSVFVGSPLTKTTIFNGQIDRIVFSPYWTV 360

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P+SI+Q ++ + +  DP YL + N+ M++ +                     RQ PG  N
Sbjct: 361 PQSIVQNELRSKIAADPNYLAEKNMEMVNGQ--------------------VRQKPGPDN 400

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           ++   K  F + ++ YMHDTP   LF+   R  + GC+ V+   +L V +LKD P W++ 
Sbjct: 401 SLGLVKFMFPNSDDIYMHDTPSKTLFDFEKRTFSHGCINVKMAKELAVAMLKDYPEWTQA 460

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            I++ ++ +  +  KL+ +VP++  Y ++   ++  I F  D+Y  D 
Sbjct: 461 KIDKAMEGKVESSFKLSKKVPIYITYFTSLVNENGQIGFFQDVYEKDA 508


>gi|218678646|ref|ZP_03526543.1| hypothetical protein RetlC8_07084 [Rhizobium etli CIAT 894]
          Length = 396

 Score =  359 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 100/388 (25%), Positives = 165/388 (42%), Gaps = 24/388 (6%)

Query: 55  FLARVDMGIDSDIPIISKE--TIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSV 109
            L R+     + I   S +       +  +A  +     G    + +   + L  G SS 
Sbjct: 12  KLVRMSPDAGAYIASRSPDGPQFEALKAELAKLRA-ADGGNEERIVVSLDKLLKPGESSP 70

Query: 110 SVQRLRERLIISGDLD---------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  + + +   G             +   S  +   + S V+ FQ   GL   G++  +
Sbjct: 71  EIANIVKAIGKHGSETLKTDHAATLAAYTGSADYSPEIVSLVEDFQKERGLKADGVIGQA 130

Query: 161 TLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           T+ AM        +I +L V + + +  L + +G RYV++N PA       +GK  L   
Sbjct: 131 TVRAMTGGDSNASKIDKLDVAMEQAR-WLPEDLGSRYVMINQPAFMAYYHNDGKEQLSMR 189

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           V+VG  + QT      I  + FNP+W +P+SII  +M+  LR DP YL      + +  G
Sbjct: 190 VVVGGKNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNG 248

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
             V    VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +R 
Sbjct: 249 HAVASSSVDWYG-STDNVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRA 307

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GCVR+ N   +   +L      +   + + + T +   VK+  ++PV+  Y +AW  
Sbjct: 308 LSHGCVRLSNPRAMAAAVLGT----TVDDVAKQIATGQNHAVKVPQKIPVYVSYFTAWPN 363

Query: 399 KDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
           KD ++++ DD+YG D           + 
Sbjct: 364 KDGVVEYFDDVYGRDAYVDKAFDTTSNA 391


>gi|157375514|ref|YP_001474114.1| hypothetical protein Ssed_2377 [Shewanella sediminis HAW-EB3]
 gi|157317888|gb|ABV36986.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 483

 Score =  358 bits (920), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 108/376 (28%), Positives = 174/376 (46%), Gaps = 12/376 (3%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLG 105
           S+   +    + R  +       + S + I +    I  Y+  +    WP +      LG
Sbjct: 109 SVEQTKLLQAIKRDRLSEFIGTILPSFDEIYRLRNMIGEYKKKV-NVKWPTMSQYEFRLG 167

Query: 106 NSSVSVQRLRERLIISGDLDPS---KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            SS  V++LR  L   GDL+ S   +     +D  V   +K FQ+RHGL+ +G +D  T+
Sbjct: 168 QSSNEVKQLRWMLTQLGDLEHSELTRYREAIYDPMVIDGIKSFQLRHGLNVNGNLDKYTV 227

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           EA+NV    R+ Q+Q NL R    L      + V +NIP   L   E G V L+  VI+G
Sbjct: 228 EAINVTPLQRVEQMQRNLWRW-ITLSTPNAEKLVWINIPGYQLSIFEQGSVTLQMKVIIG 286

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGK 279
           +    TPIL + + ++  NP W  P SII+ +++ L   +P YL      +      K  
Sbjct: 287 KPSSPTPILSTYLTKLTINPSWRPPASIIKSELLPLNAAEPGYLNHKQFELHGVGLNKKH 346

Query: 280 EVFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            + + +VD          +   Q PG+ NA+   +    +R++ Y+HDTP   LF   VR
Sbjct: 347 VIKLGDVDSKQLPTLLRQYRLVQAPGEDNALGKMRFTIVNRHSIYLHDTPAKQLFKRNVR 406

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             + GC+R+   I L  +L++         +++ V    T    L++ +PV+  Y ++W 
Sbjct: 407 ALSHGCIRLEKPIALSSYLVETDER--ARELQKAVGGSGTRHFSLSSPIPVYITYHTSWV 464

Query: 398 PKDSIIQFRDDIYGLD 413
                +Q R DIY LD
Sbjct: 465 DAAGKLQVRPDIYNLD 480


>gi|294141900|ref|YP_003557878.1| hypothetical protein SVI_3129 [Shewanella violacea DSS12]
 gi|293328369|dbj|BAJ03100.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 615

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 98/462 (21%), Positives = 200/462 (43%), Gaps = 64/462 (13%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSD-----IPIISKE 73
           ++     L+   ++ S L++  N     I   + D  +A ++  +D       +  +S +
Sbjct: 144 VITYATHLINGKVNPSTLEKTWNYDESII---KLDTIVAELNRHVDQRDVAQRLLSLSPQ 200

Query: 74  --TIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGL 130
                Q + A+  Y+ +     +P +  + L   G+ + ++  + +RLI    L P   +
Sbjct: 201 LDAYTQLKSALKKYRLLADTADFPNIKYQGLIKAGSVTPTLALIADRLIQLNYLSPQADI 260

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           S  +      AV+ +Q  H L   G++   T+ ++NVP   R  Q+++N+ R +  L   
Sbjct: 261 SN-YSHEFVGAVRAYQSSHSLQADGIIGKGTINSLNVPFAYRADQIRINMERAR-WLSSD 318

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +   Y+++N+    L   ++G++  ++ +++G++  +TPI  SRI+ ++ NP W +PRSI
Sbjct: 319 LSQEYIIINLAGYELWMYKDGQLDWQTDIVIGKISSKTPIFKSRISYLVVNPTWTVPRSI 378

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FRQDPGKINAM 308
               ++  +++DP Y+   +  + D  GK+V +  +DW   +P  F   F Q P K NA+
Sbjct: 379 -NPGLINKIKRDPSYIDKQHYMLKDSSGKKVDILAIDWQEVDPEKFKYWFVQKPWKNNAL 437

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH- 367
              K  F +R+  Y+HDTP   LF+   R  + GC+R++N ++L   LL +    +    
Sbjct: 438 GQVKFIFPNRDAIYLHDTPTKYLFSLTDRAFSHGCIRIKNPLELAEKLLNENRPATLEKN 497

Query: 368 ----------------------------------------------IEEVVKTRKTTPVK 381
                                                         +++     +T  + 
Sbjct: 498 LQIQNNKLAKRREESQLNNLSTDQVSVAPRSEPLQSPLTQPSADELLKKTFALGETQKLY 557

Query: 382 LATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           L   + +  +Y +A +     + F  D+Y  D   +  +  P
Sbjct: 558 LDEPMDILIMYWTA-ASSKGKLTFYHDVYKRDEPLMLQLKRP 598


>gi|192293029|ref|YP_001993634.1| peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192286778|gb|ACF03159.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 724

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 99/428 (23%), Positives = 171/428 (39%), Gaps = 45/428 (10%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK-E 73
               ++          +H S +   I    H I   +    +        +        +
Sbjct: 247 LTESMMDYARQAQSGRMHWSQVSADIQYPEHPIDPAQVLAKVTTAADASAALDSYNPPHK 306

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-------------RPLHLGNSSVSVQRLRERLII 120
              + +K +A   ++   G  P + I             +   +      V +LR RL +
Sbjct: 307 LYRELKKKLA---ELRGEGDKPVIKIADGETLRYQPARKKRAEVKMDDPRVPQLRARLGV 363

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVN 179
           +         S  +DA V +AV+ FQ    L  SG++D  T++A+N P   R I  + VN
Sbjct: 364 T-----ENPDSTTYDATVAAAVRKFQDHADLKASGVLDERTVKALNTPKRDRTIDTIIVN 418

Query: 180 LMRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-DRQTPILHSR 234
           + R + L        +G  YV++NIP  +L+ +++G     + V+ G+     TP+L   
Sbjct: 419 MERWRWLPRDLGAPSLGDAYVILNIPDYTLKVMQHGAEVWTTRVVTGKPGKHATPLLTET 478

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           +  I  NP W +P SII  + +  L+QDP  L    + +   +   + +           
Sbjct: 479 MKYITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRDGSIHIS---------- 528

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
                Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N      
Sbjct: 529 -----QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAREERAFSHGCMRVQNPDVYAS 583

Query: 355 WLLKDTPTWSRYHIE--EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
            LL        Y       +  R    +K  T +PV+  Y +A+      +Q R D+YG 
Sbjct: 584 TLLNIAMPEKDYTPAKVRAMYGRSEVDLKFPTPIPVNITYQTAFVDDAGKLQLRKDVYGR 643

Query: 413 DNVHVGII 420
           D   +G++
Sbjct: 644 DAAMLGLL 651


>gi|310815557|ref|YP_003963521.1| peptidoglycan binding domain-containing protein [Ketogulonicigenium
           vulgare Y25]
 gi|308754292|gb|ADO42221.1| peptidoglycan binding domain-containing protein [Ketogulonicigenium
           vulgare Y25]
          Length = 547

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 112/417 (26%), Positives = 184/417 (44%), Gaps = 20/417 (4%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
            + +G +L    +    +  +I      +      N +     G        S    A  
Sbjct: 126 AVSLGQALHGGFLTPGRVISLIKRQAPQVDGVALLNAMTSQSAGAVLRALTPSDAQYAGL 185

Query: 79  EKAIAFYQDILSRGGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            +A A      + GGW           L LG+   +V  LR RL++ G + PS  LS  F
Sbjct: 186 MRARAQLDAAEAAGGWGGEVFAGAAGKLQLGDQGDAVLSLRNRLMLQGYMAPS--LSPVF 243

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +   V+ FQ  HGL   G+V + TL  +N+ +D RI+Q+ V + R +    + +G R
Sbjct: 244 DQSLLLGVQAFQTAHGLATDGVVGAGTLAELNMGIDARIQQVLVAMERAR-WSNKPLGAR 302

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           ++ VN+         NG    R+  ++G    DR+TP     +N ++ NP W +PRSI+ 
Sbjct: 303 HIWVNLADYHTVIRNNGMDEFRTRSVIGARGADRETPEFSDIMNHMVVNPSWHVPRSIVV 362

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
            + +  L+++P  +   +I++ D  G+ +    +D+N+    NF F  R+ P + NA+  
Sbjct: 363 GEYLPQLQRNPYAVS--HINVQDGSGRAIDRSLIDFNAYNASNFPFSMREPPSRGNALGL 420

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP   LF    R  + GC+R+ +  D    LL    +  R   + 
Sbjct: 421 VKFMFPNQWNIYLHDTPSKDLFARETRAFSHGCIRLADPFDFAYQLLGPQTSDPRGLFQR 480

Query: 371 VVKTRKTTPVKLA-------TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            + T + T V L          +PVH  Y +        + FR DIYG D    G +
Sbjct: 481 TLDTGRETRVDLEQPLPVQPQPLPVHLDYRTTVIAPSGAVTFRRDIYGRDAAIWGAM 537


>gi|152990487|ref|YP_001356209.1| hypothetical protein NIS_0738 [Nitratiruptor sp. SB155-2]
 gi|151422348|dbj|BAF69852.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 492

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 106/365 (29%), Positives = 175/365 (47%), Gaps = 14/365 (3%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP----LHLGNSSVSVQRL 114
           +     S   I+    +    + +  Y++I  RGGW  + +      L  G     V +L
Sbjct: 123 LPPTKKSYDHILQNPYLDMLYEILNKYENIKKRGGWGVITLSNDYAYLLPGKKYDEVVQL 182

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           R RL+  G L         +D  ++ AV+ FQ RH L P G+V  +TL+ +N  V+  I 
Sbjct: 183 RWRLMQEGYLKDQNMTDTVYDENLKLAVEEFQRRHFLKPDGIVGPTTLKVLNESVESIIE 242

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           ++ +N+ R++  L++     YV VNIP   L    +G +   S VIVGR +R TP++   
Sbjct: 243 KILINIERLRWYLQED--KSYVFVNIPQFRLFLWHDGDMVFDSKVIVGRKERPTPLMRHE 300

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDP-QYLKDNNI--HMIDEKGKEVFVEEVDWNSP 291
           I+  + NPYW  P++II +D++  L+    + L+   I   +     + +  + + W++ 
Sbjct: 301 ISYAVLNPYWRAPKTIIAQDILPKLKAGKFEELEKEGIIASLDRYANETIPFDLIYWDAI 360

Query: 292 EPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
           +   F   F Q PG  N +   K+ F ++ + Y+HDT    LF    R  +SGCVRV   
Sbjct: 361 DLSTFPIVFLQKPGPKNFLGFVKLMFPNKYDVYLHDTNARDLFRYSYRALSSGCVRVEKP 420

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
           I+L   +     T S   I + +   +T  V++  + PV+ +YI+     D  I F  DI
Sbjct: 421 IELFHLV---EGTLSYREIFDRLWDHQTKKVRIHPKFPVYLMYITVMKEDDGNIYFYPDI 477

Query: 410 YGLDN 414
           Y LD 
Sbjct: 478 YQLDR 482


>gi|39937248|ref|NP_949524.1| hypothetical protein RPA4188 [Rhodopseudomonas palustris CGA009]
 gi|39651106|emb|CAE29629.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 724

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 98/428 (22%), Positives = 170/428 (39%), Gaps = 45/428 (10%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK-E 73
               ++          +H S +   I    H I   +    +        +        +
Sbjct: 247 LTESMMDYARQAQSGRMHWSQVSADIQYPEHPIDPAQVLAKVTTAADASAALDSYNPPHK 306

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-------------RPLHLGNSSVSVQRLRERLII 120
              + +K +A   ++   G  P + I             +   +      V +LR RL +
Sbjct: 307 LYRELKKKLA---ELRGEGDKPVIKIADGETLRYQPARKKRAEVKMDDPRVPQLRARLGV 363

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVN 179
           +         S  +DA V +AV+ FQ    L  SG++D  T++A+N P   R I  + VN
Sbjct: 364 T-----ENPDSTTYDATVAAAVRKFQDHADLKASGVLDERTVKALNTPKRDRTIDTIIVN 418

Query: 180 LMRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-DRQTPILHSR 234
           + R + L        +G  YV++NIP  +L+ +++G     + V+ G+     TP+L   
Sbjct: 419 MERWRWLPRDLGAPSLGDAYVILNIPDYTLKVMQHGAEVWTTRVVTGKPGKHATPLLTET 478

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           +  I  NP W +P SII  + +  L+QDP  L    + +   +   + +           
Sbjct: 479 MKYITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRDGSIHIS---------- 528

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
                Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N      
Sbjct: 529 -----QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAREERAFSHGCMRVQNPDVYAS 583

Query: 355 WLLKDTPTWSRYHIE--EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
            LL        Y       +  R    +K  T +PV+  Y +A+      +Q R D+YG 
Sbjct: 584 TLLNIAMPEKDYTPAKVRAMYGRSEVDLKFPTPIPVNITYQTAFVDDAGKLQLRKDVYGR 643

Query: 413 DNVHVGII 420
           D   + ++
Sbjct: 644 DAAMLALL 651


>gi|59711764|ref|YP_204540.1| carboxypeptidase [Vibrio fischeri ES114]
 gi|59479865|gb|AAW85652.1| predicted carboxypeptidase [Vibrio fischeri ES114]
          Length = 515

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 92/350 (26%), Positives = 175/350 (50%), Gaps = 15/350 (4%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           S +   +  + +  Y           +  R +   N    V  +  RL +SG+++  +  
Sbjct: 157 SSDQYEELYQRLFHYYQPYEDSESVFIKERLIRP-NQLTDVNAIIYRLQVSGEINHQEAD 215

Query: 131 ------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
                 +  +D+ +   +K FQ RHGL   G++   TL  +N+    R+R + +N+ R++
Sbjct: 216 MLLRQSNDHYDSSLVLIIKEFQKRHGLKQDGIIGPKTLHWLNMTAKERVRIMALNIQRLR 275

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
               +     +VLVNIP+  +   + G++   S VIVG+ +R+TPI  +R+N I+FNP W
Sbjct: 276 LW--ENKNSNFVLVNIPSYEMAYWQEGELVFTSKVIVGKPERRTPIFTTRLNAIVFNPEW 333

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEPPNFIF--RQ 300
            +P  I+++D++     +  +L+  N  +I      + + ++++DW       F +  +Q
Sbjct: 334 KVPTKIMREDILPKALNNKDFLQSQNFEIIPTWLSKEVISIDDIDWEQVNVETFPYKLKQ 393

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
             G  NA+   K    +RN  Y+HDTP   LF+   R  +SGC+RV    +    L+K++
Sbjct: 394 KSGNTNALGRYKFNTPNRNAIYLHDTPSRSLFSKQHRAYSSGCIRVEKASEFAQLLMKES 453

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
             +S    ++  +  +T+ V L  ++ V+ +Y ++W  +D+ +QFR  IY
Sbjct: 454 -HFSTQDYKDYHELPETSKVSLDQQISVYTIYQTSWVGEDNQVQFRM-IY 501


>gi|327478928|gb|AEA82238.1| putative periplasmic protein [Pseudomonas stutzeri DSM 4166]
          Length = 526

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 110/382 (28%), Positives = 185/382 (48%), Gaps = 20/382 (5%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR-------- 91
           I   + S      D+    + + +     +      A+   A+  Y+D+ +         
Sbjct: 142 IEPIWRSPDAPEADDRQRLLQIAVQGLADLPGAFDRARPPHAL--YRDLRAAYARQRQAA 199

Query: 92  -GGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
              W  LP  P L  G        LRE L+       +  L + +D  +  AV+ FQ++H
Sbjct: 200 LPAWRPLPSGPTLRPGMRDERSPLLRELLLAG--AGSAPALDLRYDDELVEAVRGFQLQH 257

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL+  G+V ++TL A+NV    R+ QL++NL R++  + + +  + +LV+I  A L    
Sbjct: 258 GLEADGVVGAATLAALNVSPASRLDQLRINLERLR-WISRDLEPQSLLVDIAGARLIYFR 316

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +     ++   VGR  RQTP L SRI+R+  NP W +P +I+++D + L+R+D  YL  +
Sbjct: 317 DSCPFWQTRTQVGREARQTPPLKSRISRLTLNPTWTVPPTILKQDKLPLIREDIAYLARH 376

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            + +ID +G  V    VDW    P   + RQD G  N +    I F +  + Y+HDTP  
Sbjct: 377 QMRVIDAQGNAVDPYAVDWA--NPRGILLRQDAGPANPLGQVAIRFANPFSVYLHDTPSK 434

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV + + L   LL+      R  +  ++++ +T   +LA + P+ 
Sbjct: 435 PLFERAARAVSSGCVRVESALQLVDLLLE---ADERDTVARLLQSGETHEYRLARQTPIL 491

Query: 390 FVYISAWSPKDSIIQFRDDIYG 411
             Y +A +    + ++R DIY 
Sbjct: 492 MAYWTADADDSGLPRYRPDIYK 513


>gi|152993866|ref|YP_001359587.1| hypothetical protein SUN_2290 [Sulfurovum sp. NBC37-1]
 gi|151425727|dbj|BAF73230.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 566

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 112/365 (30%), Positives = 198/365 (54%), Gaps = 15/365 (4%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLR 115
            +   ++S +P+  +++  +  K +  Y+ +     +P++     PL LG+ S  V+ ++
Sbjct: 180 NIHAYLNSLLPM--EKSYRRLVKRLENYRVMEK---FPKIKYSNDPLKLGDWSPRVKEVK 234

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           +RL ISGD   +  +   FD  +E AVK +Q R+ L  +G VD +T+  +N P    I+ 
Sbjct: 235 KRLQISGDYPKNAPVDWKFDRRLEQAVKTYQKRYLLKITGQVDKTTMYYLNQPASKNIKA 294

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           + VNL + K L  +     Y+ VN+P  +L    NG++  ++ ++VGR+DR TPI   +I
Sbjct: 295 IIVNLDKTK-LYPKHFENEYIAVNVPDFNLRYYRNGEMIFKTGIVVGRIDRPTPIFSDKI 353

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP- 294
             ++ NP W IP ++I++D++ +LR++P YL++NNIH+     KE+ V +   +  E   
Sbjct: 354 EYMVINPTWTIPDNLIKRDLIHVLRENPAYLEENNIHVFSGN-KEITVTQEMLDPYEHSD 412

Query: 295 ---NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               + F Q PG  NA+   K  F ++ + Y+HDT    L     +  +SGC+RV    D
Sbjct: 413 KKVPYRFVQYPGDSNALGRIKFMFPNKYSVYLHDTDNKSLLTRRYKIYSSGCMRVDKPFD 472

Query: 352 LDVWLLKDTPT-WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           L   LLK     ++R  I+ ++ T K   ++L   +PVH +Y + +  +D +  F++DIY
Sbjct: 473 LMDILLKHAKGRYTREDIDAIIATDKPKTIRLKKAIPVHILYFTVF-EEDGLAYFKNDIY 531

Query: 411 GLDNV 415
             D +
Sbjct: 532 LYDKI 536


>gi|227822250|ref|YP_002826221.1| peptidoglycan binding protein, putative [Sinorhizobium fredii
           NGR234]
 gi|227341250|gb|ACP25468.1| peptidoglycan binding protein, putative [Sinorhizobium fredii
           NGR234]
          Length = 630

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 154/376 (40%), Gaps = 23/376 (6%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP---LHLGNSS 108
            D      D+    +            ++ +   +        P + I P   L  G+++
Sbjct: 245 LDKAATSADVAALIEERNPKSPQFLALKQELERLR--AETDAAPRVEIAPGTLLKPGDNN 302

Query: 109 VSVQRLRE--RLIISGDLDPSKGL-------SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             +  +    +L  S  L     +       +  +   + S V+ FQ  HGL   G+V  
Sbjct: 303 PELANIVAGIKLKASEALKAEHAVVLAGYQGTPEYTPELVSLVEAFQKEHGLKADGVVGQ 362

Query: 160 STLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           +++  +        +I +L++ + + +  L   +G RYV +N PA      ++G      
Sbjct: 363 ASIRVLTGGDTTASKIDKLEIAMEQAR-WLPNDLGNRYVFINQPAFMAYYTDHGAEQFSM 421

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V+VG    QT   H  I  +  NPYW +P+SII  +M+  LR DP YL      + +  
Sbjct: 422 RVVVGSKANQTYFFHDEIQTVEVNPYWGVPQSIIVNEMLPKLRSDPSYLDRMGYQV-EVG 480

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           G+ V    VDW      +   RQ P   NA+   KI F + +  YMHDTP    F    R
Sbjct: 481 GRVVPSYAVDWYG-STNSVAVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDQR 539

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             + GCVR+     +   +L      S   +   +   +   + +  +VPV+  Y +AW 
Sbjct: 540 ALSHGCVRLAEPRRMAAAVL----GVSMDDVGNEIAQGRNRALPVPQKVPVYVSYFTAWP 595

Query: 398 PKDSIIQFRDDIYGLD 413
            KD  +++ +D+Y  D
Sbjct: 596 NKDGKVEYFNDVYERD 611


>gi|110633909|ref|YP_674117.1| hypothetical protein Meso_1556 [Mesorhizobium sp. BNC1]
 gi|110284893|gb|ABG62952.1| conserved hypothetical protein [Chelativorans sp. BNC1]
          Length = 661

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 91/384 (23%), Positives = 156/384 (40%), Gaps = 24/384 (6%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP---LHLGNSSVSV 111
             +  +            E        +   +    +    E+ I P   +  G S    
Sbjct: 250 LASSAEPATYLQSLHPQNELFNALRDELKKLRTEAEQEK-EEIVIAPDILVRPGASHPDF 308

Query: 112 QRLRERLIIS-----------GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            ++   L I            G +  +   S  +   +   +K  Q +H L P G+V   
Sbjct: 309 SKVL--LAIESKADDDFRAEHGAVLTAHLGSQTYAEELIPIIKAVQRQHKLSPDGIVGQR 366

Query: 161 TLEAMNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           T+ A+       RI ++ +++ R++      +G   V++N+P+ +    ENG   L    
Sbjct: 367 TVRALTGESASSRIEKVLLSMERLR-WQPSYLGSARVMINVPSFTASYFENGTEKLSMRA 425

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           +VG+   QT   H  I  + FNPYW +PRSII  +M+  LR+DP YL      + D +G+
Sbjct: 426 VVGQSSSQTYFFHDEIEYVEFNPYWGVPRSIIVNEMLPKLRRDPGYLDRAGYEVFDSRGR 485

Query: 280 EVFVEEVDWNSPEPP-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
            V    ++W        +  RQ PG  NA+   KI F + ++ YMHDTP+  LF    R 
Sbjct: 486 RVASSAINWAVYGANVPYGVRQPPGASNALGRLKIMFPNSHDIYMHDTPQKSLFARDSRA 545

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GCVR+ +   +   +L      S   +   +   +     + +++PV+  Y +AW  
Sbjct: 546 FSHGCVRLEDPGAMAAAVL----GISSEEVAAEINKGRNMRRNVPSKIPVYVGYFTAWPE 601

Query: 399 KDSIIQFRDDIYGLDNVHVGIIPL 422
               I +  DIY  D      +  
Sbjct: 602 TSGSISYHADIYERDAHLKKALSR 625


>gi|148558873|ref|YP_001258930.1| cell wall degradation protein [Brucella ovis ATCC 25840]
 gi|148370130|gb|ABQ60109.1| cell wall degradation protein [Brucella ovis ATCC 25840]
          Length = 656

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 236 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 294

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 295 QYAALKRALADTE--PPRGKPIRISFDGGIKPGDKSEQLSKVVALISRHVPADYLAQHRD 352

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 353 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 412

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   + ++  ++FNP
Sbjct: 413 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYDKVQTVVFNP 471

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 472 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 530

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 531 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 590

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 591 VKNLDKYF-----GKDERDIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 639


>gi|153009554|ref|YP_001370769.1| peptidoglycan-binding domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561442|gb|ABS14940.1| Peptidoglycan-binding domain 1 protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 668

 Score =  356 bits (914), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 99/415 (23%), Positives = 171/415 (41%), Gaps = 27/415 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKET 74
               L   +   E  + A  L    +   + +      +   +  D          S E 
Sbjct: 248 SARALRYAIDAGEGRVIADRLSGFHDLPRNRVDPKAVLEKLASESDPAAYLHGFQPSNEQ 307

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSVS---VQRLRERLIISGDLDP-- 126
            A  ++ +A             + I     +  G+++     V  L  R   +G L    
Sbjct: 308 YAALKRELAN----TEPPSAEPIRISLNGIIKPGDTNDQLSKVVALISRHAPAGYLAQHK 363

Query: 127 ----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL-RIRQLQVNLM 181
               +      +D  + SA+K +Q   G  P G++  +TL A+       +  ++  ++ 
Sbjct: 364 QVLDTHASGDVYDPELVSAIKDYQKLSGSTPDGVIGRNTLSALQGEQSSIKRDRILYSME 423

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++  L    G RYV+VN PA   E  E+GK  L   V++G    QT   ++++  ++FN
Sbjct: 424 RLR-WLPHDFGTRYVMVNQPAYRAEYFEDGKEKLAMNVVIGSPTHQTYFFYNKVQTVVFN 482

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFR 299
           P W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          R
Sbjct: 483 PSWGVPRSIILNEMLPKVMRDTSYLDRNGYEVYAG-GKKVSASAVNWSAVAAGKAHVGIR 541

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q P   NA+   KI F + ++ YMHDTP    F+  +R  + GC+R+    D+   +L  
Sbjct: 542 QKPSLDNALGELKILFPNAHDIYMHDTPAKSYFSRDMRALSHGCIRLERPRDMAAAVLGT 601

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + T    +       +    +K+   VPV   Y +AW   D  I +  D+Y  D+
Sbjct: 602 SVTDLEKYF-----GKNERGIKVKEPVPVFISYFTAWPEADGKIHYYGDVYDRDS 651


>gi|192359326|ref|YP_001983485.1| cell wall degradation protein [Cellvibrio japonicus Ueda107]
 gi|190685491|gb|ACE83169.1| cell wall degradation protein [Cellvibrio japonicus Ueda107]
          Length = 746

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 101/298 (33%), Positives = 151/298 (50%), Gaps = 4/298 (1%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           P+      FD Y+  AVK FQ    L+  G +  +T  A+NV    R+ Q++VNL R + 
Sbjct: 450 PAINPDEVFDEYLVEAVKTFQREQYLEVDGAIGPATRAALNVSAKTRLEQIRVNLDRARW 509

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           LL   +    VLV+I    +   +  +   RS V VG   R +P+  S +N I  NP W 
Sbjct: 510 LL-HSIPPEMVLVDIAGFKVTYFKASQPIWRSRVQVGMAYRTSPLFRSEVNYITLNPTWT 568

Query: 246 IPRSIIQKDMMALLRQ-DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
           +P +I++KD++  LR+ D  YL+DN I +++ +G+E+    +DW    P     RQD G 
Sbjct: 569 VPPTILRKDILPKLRKGDLSYLRDNRIRVLNRQGQELDPASIDWQ--RPGAITLRQDAGP 626

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
             A+    I F + +  Y+HDTP   LF    R  +SGC+RV   ++L   LL DTP W 
Sbjct: 627 KAALGKAVIRFPNSHAVYLHDTPHQRLFEKSQRAFSSGCIRVERALELVQLLLSDTPGWD 686

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              IE+ + T  T  V LA  VP+   Y +A    +  + F+ DIY  D V +  +  
Sbjct: 687 AAAIEKALATGNTRNVILARRVPILLAYWTADVIDEHKVVFKPDIYARDPVLLAALNR 744



 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            +     +  Y+ ++  GGWP L   P L        +  LR RL +SG+  P       
Sbjct: 310 YSGLRAGLLRYRQLVDDGGWPALESGPTLKPCMIDPLIAVLRRRLAVSGEYQPPVADQRP 369

Query: 134 FDAYVESA 141
             + ++SA
Sbjct: 370 ASSSLDSA 377


>gi|262171698|ref|ZP_06039376.1| hypothetical protein VII_002521 [Vibrio mimicus MB-451]
 gi|261892774|gb|EEY38760.1| hypothetical protein VII_002521 [Vibrio mimicus MB-451]
          Length = 522

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 91/321 (28%), Positives = 159/321 (49%), Gaps = 14/321 (4%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G+       L  RL +   D+   +     +D  +   +K FQ  HGL P G++   T
Sbjct: 200 RPGDPLTHRDALLRRLSLVNLDVTDVRDDITFYDQTLVKPIKQFQNMHGLKPDGVIGPET 259

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  ++G+    + V+V
Sbjct: 260 MKWLNKSVTERLALLALNAERIRLWSTQQ--GTVIVVNVPGFEMKYWDSGREVFGAKVVV 317

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--K 279
           GRV R TP+++++++ ++ NP W +PR I+ +D++ ++++D +YL  + I +I      +
Sbjct: 318 GRVTRPTPVMNTKLDSLIINPTWNVPRKIMVEDILPMVKRDSEYLARHQIEIIRSWSDPE 377

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +  + +DW+S  P  F +  RQ  G  NA+   K    +    Y+HDTP   LFNNV R
Sbjct: 378 VLDPQLIDWSSINPETFPYRMRQQAGVQNALGMYKFNTPNSRAIYLHDTPSKHLFNNVSR 437

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+RV N       LL+         I        T  + L   +PV  +Y + W 
Sbjct: 438 AFSSGCIRVENAQKFAQTLLEQQG------IVLNELPAYTQAIALKKRIPVQIIYQTVWY 491

Query: 398 PKDSIIQFRDDIYGLDNVHVG 418
            +   +Q+RDDIY  D+  + 
Sbjct: 492 -EGGALQYRDDIYRYDSSSIS 511


>gi|258624450|ref|ZP_05719397.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258583297|gb|EEW08099.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 522

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 91/321 (28%), Positives = 158/321 (49%), Gaps = 14/321 (4%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G+       L  RL +   D+   +     +D  +   +K FQ  HGL P G++   T
Sbjct: 200 RPGDPLTHRDALLRRLSLVNLDVTDVRDDITFYDQTLVKPIKQFQSMHGLKPDGVIGPET 259

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+V
Sbjct: 260 MKWLNKSVTERLALLALNAERIRLWSTQQ--GTVIVVNVPGFEMKYWDAGREVFGAKVVV 317

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--K 279
           GRV R TP+++++++ ++ NP W +PR I+ +D++ ++++D +YL  + I +I      +
Sbjct: 318 GRVTRPTPVMNTKLDSLIINPTWNVPRKIMVEDILPMVKRDSEYLARHQIEIIRSWSDPE 377

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +  + +DW+S  P  F +  RQ  G  NA+   K    +    Y+HDTP   LFNNV R
Sbjct: 378 VLDPQLIDWSSINPETFPYRMRQQAGVQNALGMYKFNTPNSRAIYLHDTPSKHLFNNVSR 437

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+RV N       LL+         I        T  + L   +PV  +Y + W 
Sbjct: 438 AFSSGCIRVENAQKFAQTLLEQQG------IVLNELPAYTQAIALKKRIPVQIIYQTVWY 491

Query: 398 PKDSIIQFRDDIYGLDNVHVG 418
            +   +Q+RDDIY  D+  + 
Sbjct: 492 -EGGALQYRDDIYRYDSSSIS 511


>gi|256061060|ref|ZP_05451216.1| cell wall degradation protein [Brucella neotomae 5K33]
          Length = 670

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 250 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 308

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 309 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 366

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 367 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 426

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 427 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 485

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 486 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 544

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 545 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 604

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 605 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|163751738|ref|ZP_02158956.1| hypothetical protein KT99_12214 [Shewanella benthica KT99]
 gi|161328390|gb|EDP99549.1| hypothetical protein KT99_12214 [Shewanella benthica KT99]
          Length = 453

 Score =  355 bits (911), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 105/372 (28%), Positives = 170/372 (45%), Gaps = 12/372 (3%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVS 110
           +    +   ++       + S   + +  + I  Y+  L    WP +      LG SS  
Sbjct: 84  KLLEAINNAELSAYIASILPSYNEVLRIRRMIRVYKTQLDM-DWPSVTRVNFKLGQSSQQ 142

Query: 111 VQRLRERLIISGDLDPS---KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           VQRLR  L + GDL+ S   +     +D  V   +K FQ RHGL  +G +D+ T++A+N+
Sbjct: 143 VQRLRWMLTVLGDLENSELTRYREAIYDPMVIQGIKSFQRRHGLTANGELDAPTVQALNI 202

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
               R+ Q+Q NL R   +L      +Y+ +NIP  SLE    G++ L   VIVG+    
Sbjct: 203 SPKRRVIQMQQNLWRW-IMLPSSPPPKYIKINIPNYSLELFVLGELDLSMKVIVGKPSSP 261

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH---MIDEKGKEVFVE 284
           TP+L +R+ R+  NPYW  P SII+ +++ L  ++P YL         +  +    V + 
Sbjct: 262 TPVLLTRVTRMTINPYWTPPTSIIRSELLPLNSREPGYLNHKGFELHPVAKKDNPVVKLI 321

Query: 285 EVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            +           +   Q PGK NA+   +    +  + Y+HDTP+  LF       + G
Sbjct: 322 NIAPRQLAELLKEYRLVQAPGKDNALGKLRFTIPNTESIYLHDTPQKKLFAGNDLALSHG 381

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           C+R+   + L  ++L      +   I   +    T  V L+  +P+   Y +AW      
Sbjct: 382 CIRLEKAVALFEYILSTQ--DNAEEIRRALGQPNTRYVSLSNAIPIFITYQTAWVDSRGK 439

Query: 403 IQFRDDIYGLDN 414
           +Q R DIY LD 
Sbjct: 440 LQLRPDIYHLDR 451


>gi|261325062|ref|ZP_05964259.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|261301042|gb|EEY04539.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
          Length = 666

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 246 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 304

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 305 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 362

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 363 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 422

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 423 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 481

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 482 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 540

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 541 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 600

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 601 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|115526100|ref|YP_783011.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115520047|gb|ABJ08031.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           BisA53]
          Length = 705

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 102/429 (23%), Positives = 172/429 (40%), Gaps = 43/429 (10%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARV---DMGIDSDIPIIS 71
               +L          +H S +   I    H I        +         +    P   
Sbjct: 229 LTASMLDYARQAQSGRMHWSQVSSDILYPEHPIDPAEVLANVTNAKDPSAALAGYNPP-- 286

Query: 72  KETIAQTEKAIAFYQD--------ILSRGGWPELPIRPLH--LGNSSVSVQRLRERLIIS 121
            +   + +  +A  +         I        +P R     +      V +LR +L I+
Sbjct: 287 HKLYRELKAKLAELRGQGDGPVVTIAEGPALKYVPARKKQAAIEVDDPRVPQLRAKLGIT 346

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNL 180
                    S  +DA V +AV+ FQ    +  +G++D  T++A+N P   R I  + VN+
Sbjct: 347 -----ENADSTKYDAKVAAAVRKFQDATDIPVTGVLDDRTVKALNSPKRDRQIDIVVVNM 401

Query: 181 MRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-DRQTPILHSRI 235
            R + L  Q     +G  YV++N+P  +L+ ++N      + V+ G+     TP+L   +
Sbjct: 402 ERWRWLPRQLGASSLGNAYVILNVPDFTLKVMQNDAAVWTTRVVTGKPGKHATPMLTETM 461

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
             I  NP W +P SII  + +  L+QDP  L    + +   +   + +            
Sbjct: 462 KYITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRDGSIHIS----------- 510

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
               Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       
Sbjct: 511 ----QPPGERNALGRIRFNFPNKFLVYQHDTPDKHLFARDERAFSHGCMRVQNPDQYAAT 566

Query: 356 LLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           LL  T    RY  E +  +  R    +K  T +PV+  Y +A+      +Q R DIYG D
Sbjct: 567 LLNITMPNERYSPERIRGMYGRSEIDLKFPTPIPVNITYQTAFVDDSGKLQIRKDIYGRD 626

Query: 414 NVHVGIIPL 422
              +G++  
Sbjct: 627 AAMIGLLRN 635


>gi|146280663|ref|YP_001170816.1| putative periplasmic protein [Pseudomonas stutzeri A1501]
 gi|145568868|gb|ABP77974.1| putative periplasmic protein [Pseudomonas stutzeri A1501]
          Length = 495

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 110/382 (28%), Positives = 188/382 (49%), Gaps = 20/382 (5%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR-------- 91
           I   + S      D+    + + +     + +    A+   A+  Y+D+ +         
Sbjct: 111 IEPIWRSPDAPEADDRQRLLQIAVQGLADLPTAFDRARPPHAL--YRDLRAAYARQRQAA 168

Query: 92  -GGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
              W  LP  P L  G        LRE L+       +  L + +D  +  AV+ FQ++H
Sbjct: 169 LPAWRPLPSGPTLRPGMRDERSPLLRELLLAG--AGSTPALDLRYDDELVEAVRGFQLQH 226

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL+  G+V ++TL A+NV    R+ QL++NL R++  + + +  + +LV+I  A L    
Sbjct: 227 GLEADGVVGAATLVALNVSPASRLDQLRINLERLR-WISRDLEPQSLLVDIAGARLIYFR 285

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +     ++   VGR  RQTP+L SRI+R+  NP W +P +I+++D + L+R+D  YL  +
Sbjct: 286 DSCPFWQTRTQVGREARQTPLLKSRISRLTLNPTWTVPPTILKQDKLPLIREDIAYLARH 345

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            + +ID +G  V    VDW    P   + RQD G  N +    I F +  + Y+HDTP  
Sbjct: 346 QMRVIDAQGNAVDPYAVDWA--NPRGILLRQDAGPANPLGQVAIRFANPFSVYLHDTPSK 403

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV + + L   LL++     R  +  ++++ +T   +LA + P+ 
Sbjct: 404 PLFERAARAVSSGCVRVESALQLVDLLLEED---ERDTVARLLQSGETHEYRLARQTPIL 460

Query: 390 FVYISAWSPKDSIIQFRDDIYG 411
             Y +A +    + ++R DIY 
Sbjct: 461 MAYWTADADDSGLPRYRPDIYK 482


>gi|294852310|ref|ZP_06792983.1| cell wall degradation protein [Brucella sp. NVSL 07-0026]
 gi|294820899|gb|EFG37898.1| cell wall degradation protein [Brucella sp. NVSL 07-0026]
          Length = 666

 Score =  354 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 246 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 304

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 305 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 362

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 363 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 422

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 423 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 481

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 482 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 540

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 541 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMATAVLGTS 600

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 601 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|258620190|ref|ZP_05715229.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587548|gb|EEW12258.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 522

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 91/321 (28%), Positives = 158/321 (49%), Gaps = 14/321 (4%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G+       L  RL +   D+   +     +D  +   +K FQ  HGL P G++   T
Sbjct: 200 RPGDPLTHRDALLRRLSLVNLDVTDVRDDITFYDQTLVKPIKQFQNMHGLKPDGVIGPET 259

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+V
Sbjct: 260 MKWLNKSVTERLALLALNAERIRLWSTQQ--GTVIVVNVPGFEMKYWDAGREVFGAKVVV 317

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--K 279
           GRV R TP+++++++ ++ NP W +PR I+ +D++ ++++D +YL  + I +I      +
Sbjct: 318 GRVTRPTPVMNTKLDSLIINPTWNVPRKIMVEDILPMVKRDSEYLARHQIEIIRSWSDPE 377

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +  + +DW+S  P  F +  RQ  G  NA+   K    +    Y+HDTP   LFNNV R
Sbjct: 378 VLDPQLIDWSSINPETFPYRMRQQAGVQNALGMYKFNTPNSRAIYLHDTPSKHLFNNVSR 437

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+RV N       LL+         I        T  + L   +PV  +Y + W 
Sbjct: 438 AFSSGCIRVENAQKFAQTLLEQQG------IVLNELPAYTQAIALKKRIPVQIIYQTVWY 491

Query: 398 PKDSIIQFRDDIYGLDNVHVG 418
            +   +Q+RDDIY  D+  + 
Sbjct: 492 -EGGALQYRDDIYRYDSSSIS 511


>gi|150396784|ref|YP_001327251.1| hypothetical protein Smed_1575 [Sinorhizobium medicae WSM419]
 gi|150028299|gb|ABR60416.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
          Length = 631

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 94/380 (24%), Positives = 162/380 (42%), Gaps = 27/380 (7%)

Query: 52  FDNFLARVDMGIDSDIPIISKE----TIAQTEKAIAFYQDILSRGGWPELPIRP---LHL 104
              FL +++   D    I S+           + +   +  +     P + I P   L  
Sbjct: 243 LLAFLEKIEASGDVAALIESRNPKSAQFEALRQELERLRTQVEAT--PRVEIAPGTLLKP 300

Query: 105 GNSSVSVQRLRE--RLIISGDLDPSKGL-------SVAFDAYVESAVKLFQMRHGLDPSG 155
           G S+  +  +    +L  S  L     +       +  +   +   V+ FQ  HGL   G
Sbjct: 301 GESNPELANVIAGIKLKASDALKTEHAVVLAAYGGTPDYTPELVPVVEAFQKEHGLKADG 360

Query: 156 MVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           +V  +++ A+     +  +IR++++ + + +  L   +G RYV +N PA +    E G  
Sbjct: 361 IVGQASIRAITGGDTIGEKIRKIEIAMEQAR-WLPDGLGDRYVFINQPAFTASYTEQGAE 419

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
                V+VG    QT      I  +  NPYW +P+SII  +M+  LR DP YL      +
Sbjct: 420 QFSMRVVVGSKANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKLRSDPGYLDRMGYQV 479

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
            +  G+ V    V+W      +   RQ P   NA+   KI F + +  YMHDTP    F 
Sbjct: 480 -EVGGRVVSSTAVNWYG-STNSIAVRQPPSSDNALGELKILFPNAHAIYMHDTPSKSFFK 537

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
              R  + GCVR+ +   +   +L      S   + E +   +   + ++ +VPV+  Y 
Sbjct: 538 RDQRALSHGCVRLADPRRMAAAVL----GVSVDEVGEEISGGRNKALPVSAKVPVYVSYF 593

Query: 394 SAWSPKDSIIQFRDDIYGLD 413
           +AW  KD  +++ +D+Y  D
Sbjct: 594 TAWPNKDGTVEYFNDVYERD 613


>gi|161618916|ref|YP_001592803.1| peptidoglycan binding domain-containing protein [Brucella canis
           ATCC 23365]
 gi|161335727|gb|ABX62032.1| Peptidoglycan-binding domain 1 protein [Brucella canis ATCC 23365]
          Length = 510

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 90  SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 148

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 149 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPANYLAQHRD 206

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 207 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 266

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   +++I  ++FNP
Sbjct: 267 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKIQTVVFNP 325

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 326 SWGVPRSIILNEMLPKVMRDTSYLDRNGYKVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 384

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 385 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 444

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 445 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 493


>gi|254704262|ref|ZP_05166090.1| cell wall degradation protein [Brucella suis bv. 3 str. 686]
          Length = 670

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 250 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 308

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 309 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPANYLAQHRD 366

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 367 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 426

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 427 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 485

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 486 SWGVPRSIILNEMLPKVMRDTSYLDRNGYKVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 544

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 545 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 604

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 605 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|54309189|ref|YP_130209.1| amidase [Photobacterium profundum SS9]
 gi|46913621|emb|CAG20407.1| hypothetical amidase [Photobacterium profundum SS9]
          Length = 578

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 97/339 (28%), Positives = 169/339 (49%), Gaps = 19/339 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSG 155
           +  G++ V+ + L + L    D+  ++        ++     +  A+K FQ R+GL   G
Sbjct: 239 IRKGDAIVAGKELAKVLFDLNDMTEAEYTFITQMPTITNSGTMLEAIKRFQRRNGLADDG 298

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           ++ ++T   + +P     R++ VN+ R + +        ++ VNIP   L+  E G V  
Sbjct: 299 IIGAATTAQLVMPYTDIARRVAVNIQRFRNI-NVIDNQPHIWVNIPDYMLKIFEQGNVIF 357

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
            S VIVGR  R T +  S IN ++ NP W +P +I +KD++  ++    YL  +N+ +++
Sbjct: 358 ESKVIVGRTSRPTNLFSSAINTMVVNPTWNVPETIKRKDVIPKVKHSRDYLTAHNMRILN 417

Query: 276 EKG--KEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
                 E+  +++DW+S  P  F   F+Q PG  N++   K    +  + Y+HDTP   L
Sbjct: 418 SWRDRTEIPADQIDWSSVNPKTFPHEFQQGPGPSNSLGRVKFLMPNDYSIYLHDTPARGL 477

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           FN   R  +SGCVRV    DL  +++      +      ++K      V+L+  + V FV
Sbjct: 478 FNKTKRNLSSGCVRVEKAYDLANFIIDFQKRKNIESFNAMLKDGDLDTVRLSQRLGVDFV 537

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPIDS 430
           Y++AW  + + +Q R+DIYG D+        P+   IDS
Sbjct: 538 YLTAWIDEKNTLQMREDIYGYDS--------PQKEAIDS 568


>gi|262165524|ref|ZP_06033261.1| hypothetical protein VMA_001971 [Vibrio mimicus VM223]
 gi|262025240|gb|EEY43908.1| hypothetical protein VMA_001971 [Vibrio mimicus VM223]
          Length = 522

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 91/321 (28%), Positives = 158/321 (49%), Gaps = 14/321 (4%)

Query: 103 HLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G+       L  RL +   D+   +     +D  +   +K FQ  HGL P G++   T
Sbjct: 200 RPGDPLTHRDALLRRLSLVNLDVTDVRDDITFYDQTLVKPIKQFQNMHGLKPDGVIGPET 259

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+V
Sbjct: 260 MKWLNKSVTERLALLALNAERIRLWSTQQ--GTVIVVNVPGFEMKYWDAGREVFGAKVVV 317

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--K 279
           GRV R TP+++++++ ++ NP W +PR I+ +D++ ++++D +YL  + I +I      +
Sbjct: 318 GRVTRPTPVMNTKLDSLIINPTWNVPRKIMVEDILPMVKRDSEYLARHQIEIIRSWSDPE 377

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +  + +DW+S  P  F +  RQ  G  NA+   K    +    Y+HDTP   LFNNV R
Sbjct: 378 VLDPQLIDWSSINPETFPYRMRQQAGVQNALGMYKFNTPNSRAIYLHDTPSKHLFNNVSR 437

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+RV N       LL+         I        T  + L   +PV  +Y + W 
Sbjct: 438 AFSSGCIRVENAQKFAQTLLEQQG------IVLNELPAYTQAIALKKRIPVQIIYQTVWY 491

Query: 398 PKDSIIQFRDDIYGLDNVHVG 418
            +   +Q+RDDIY  D+  + 
Sbjct: 492 -EGGALQYRDDIYRYDSSSIS 511


>gi|90410380|ref|ZP_01218396.1| hypothetical amidase [Photobacterium profundum 3TCK]
 gi|90328621|gb|EAS44905.1| hypothetical amidase [Photobacterium profundum 3TCK]
          Length = 578

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 92/330 (27%), Positives = 164/330 (49%), Gaps = 11/330 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSG 155
           +  G+  V+ + L + L    D+  ++        +V     +  A+K FQ RHGL   G
Sbjct: 239 IRKGDVIVAGKDLAKVLFDLNDMTEAEYAFITQMPTVTNSGTMLEAIKRFQRRHGLADDG 298

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           ++ ++T   + +P     R++ +N+ R + +        ++ VNIP   L+  + G V  
Sbjct: 299 LIGAATTAQLVMPYTDIARRIALNMQRFRNI-NMIDNQPHIWVNIPDYMLKIFDQGNVIF 357

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
            S VIVGR  R T +  S IN ++ NP W +P +I +KD++  ++    YL  +N+ +++
Sbjct: 358 ESKVIVGRTSRPTNLFSSAINTMVVNPTWNVPETIKRKDVIPKVKHSRDYLTAHNMRILN 417

Query: 276 EKG--KEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
                 E+  +++DW++  P  F   F+Q PG  N++   K    +  + Y+HDTP   L
Sbjct: 418 SWRDRTEIPADQIDWSNVNPKTFPHEFQQGPGPSNSLGRVKFLMPNDYSIYLHDTPARGL 477

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           FN   R  +SGCVRV    DL  +++      +      ++       V+L+  + V FV
Sbjct: 478 FNKSKRNLSSGCVRVEKAYDLANFIIDFQKRKNIEPFNAMLNDGDLDTVRLSQRLGVDFV 537

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           Y++AW  + + +Q R+DIYG D+    +I 
Sbjct: 538 YLTAWVDEKNTLQMREDIYGYDSQQKDVID 567


>gi|94968926|ref|YP_590974.1| hypothetical protein Acid345_1899 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550976|gb|ABF40900.1| conserved hypothetical protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 561

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 107/365 (29%), Positives = 176/365 (48%), Gaps = 13/365 (3%)

Query: 75  IAQTEKAIAFYQDILSRGGWP--ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---G 129
              T +A+  Y  +  +       LP+  ++ G     +  L +RL   GDLDP      
Sbjct: 198 YEATRQAMLQYTQLAKQPDTEKLPLPVGVVYQGGYYDHMPALAKRLQQLGDLDPKVIILA 257

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            ++ +D  +   V  FQ RHGL   G + S T++A+N+P+  R+ QL++ L R + +  Q
Sbjct: 258 DAIKYDDPLMGGVAHFQSRHGLPNDGNLTSDTIDALNIPIADRLEQLKLALERYRWIRYQ 317

Query: 190 KMGLRYVLVNIPAASLEAVEN-GKVGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIP 247
                 V+VN+P   L   +  G   L   V VG   D QTPI    I  I+F PYW + 
Sbjct: 318 FTSPP-VVVNVPEFKLFGYDGSGTQILSMGVNVGDAFDFQTPIFEGDIRYIVFRPYWYVT 376

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD---WNSPEPPNFIFRQDPGK 304
            +I + +M+  + +D  YL+ N + ++D+ GK +    +        +  ++  RQ PG 
Sbjct: 377 PTIQRDEMVPSVEEDRTYLEQNEMEVVDKDGKVIASGAISDAVLKHLKNGSYSIRQRPGA 436

Query: 305 INAMASTKIEFYSRNNTYMHDTPE-PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            NA+   KI F + +N Y+HDTPE   +F+   R  + GC+ +    DL  WLL+D   W
Sbjct: 437 DNALGLVKIIFPNSHNVYLHDTPEFKTMFSKAPRALSHGCIHLEKPADLAYWLLRDKTDW 496

Query: 364 SRYHIEEVVKTR-KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           S   ++E ++     + V L   VP+  +Y++A +  +  +QF  DIYG D      +  
Sbjct: 497 SLDKVKEAMQHGRDNSSVTLTKPVPILILYVTARAQTNGTVQFFKDIYGHDVELKAALAK 556

Query: 423 PEDHP 427
              +P
Sbjct: 557 GYPYP 561


>gi|329890356|ref|ZP_08268699.1| putative peptidoglycan binding domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328845657|gb|EGF95221.1| putative peptidoglycan binding domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 518

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 105/430 (24%), Positives = 174/430 (40%), Gaps = 39/430 (9%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF--DNFLARVDMGIDSDIPIISKE 73
               L     L E  +    ++E+     +S+   R   D   A         +P  +  
Sbjct: 110 TAAALAYAKVLSEGRVRPETVEELWEMQKNSVDLPRGLVDAVAANKLSQWFDALP-PTDL 168

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGL-- 130
                    A Y+ I  +GGWP   I   +  G S   +  L  RL   GDL  +     
Sbjct: 169 GYTNLSAGYARYRRIARQGGWPAFRIGGTIEPGTSDPRIPALVARLAAEGDLSAAAAERL 228

Query: 131 --SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
             ++A+   +E AV+ FQ RHGL   G +  +T  ++    + R RQ+ +NL R ++ L+
Sbjct: 229 KGNLAYGPELEQAVRSFQTRHGLGSDGRIGGATQRSLTATAEDRARQIALNLER-RRWLK 287

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           + +    + VN  AA +   ++GK    + V+VG    QTP L      ++ NP W +P 
Sbjct: 288 RDLNPERIEVNTAAAIMVYWKDGKPVHSNRVVVGTAANQTPSLEKPFASVVANPPWTVPM 347

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I +++++      P YL  N++++              W           Q  G  +++
Sbjct: 348 GIARREILPK---GPGYLAANDMYV----------NADGW---------VVQRAGPKSSL 385

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
            + K E       ++HDTP    FN  VR  + GCVRV++ I     LL   P       
Sbjct: 386 GNVKFELQDSYAIFLHDTPARGAFNLSVRQRSHGCVRVQDAIGFARLLLSPDPE-RLALF 444

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII----PLPE 424
           +    + +T  V     + V  +Y +A+      + FR+D+Y  D      +     LP+
Sbjct: 445 DAAQASGETKRVTTGRNIGVRLLYWTAFVDGQGRVAFREDVYKRDAKLADALGIAVNLPQ 504

Query: 425 ---DHPIDSD 431
              D PID D
Sbjct: 505 VIADAPIDPD 514


>gi|261754930|ref|ZP_05998639.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
 gi|261744683|gb|EEY32609.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
          Length = 660

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 240 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 298

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 299 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPANYLAQHRD 356

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 357 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 416

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 417 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 475

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 476 SWGVPRSIILNEMLPKVMRDTSYLDRNGYKVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 534

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 535 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 594

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 595 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|163843230|ref|YP_001627634.1| peptidoglycan binding domain-containing protein [Brucella suis ATCC
           23445]
 gi|163673953|gb|ABY38064.1| Peptidoglycan-binding domain 1 protein [Brucella suis ATCC 23445]
          Length = 510

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 90  SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 148

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 149 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 206

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 207 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 266

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 267 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 325

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 326 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 384

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 385 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 444

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 445 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 493


>gi|182677142|ref|YP_001831288.1| peptidoglycan binding domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182633025|gb|ACB93799.1| Peptidoglycan-binding domain 1 protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 624

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 89/353 (25%), Positives = 146/353 (41%), Gaps = 31/353 (8%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDP--- 126
            +E        +   +          +P  P L +G     V  +R RL + G LD    
Sbjct: 280 QQEGYVALRDKLVAMRQERQPVARRLIPSGPPLRVGMRDPRVALIRARLSLDGKLDKGQT 339

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN------VPVDLRIR-QLQVN 179
             G S  +D+ V  AV  FQ  +GL  SG++   T   ++       P+   +  ++  N
Sbjct: 340 ENGASEIYDSEVSMAVADFQRANGLPASGVLTPQTSAILSGARLSATPLSPHVEHEILAN 399

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           + R +  +   +G   + VN+P   +  +E  +V  R  V++G+ +  TPI    +  ++
Sbjct: 400 MERWR-WMPHDLGHDRIEVNLPDFEVAVIEKDEVVSRHRVVIGKEETPTPIFSHVMQFLI 458

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NPYW +P SI++K+M+  L  +P YL      +    G  V                 R
Sbjct: 459 VNPYWNVPASILKKEMLPKLAANPNYLHRLGYEVFKRDGHLV----------------VR 502

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG+ NA+   K  F +    Y+HDTP    F    R  + GCVRV         +L  
Sbjct: 503 QPPGERNALGRIKFMFPNDYAVYLHDTPSKHYFEEDKRAFSHGCVRVDEPYHFAEAVLG- 561

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
            P WS   I+  +   K   + L   +P+H  Y +A   +   +   +D+YG 
Sbjct: 562 -PKWSESRIKG-LFGEKERYITLPKPLPIHLEYFTATVDRFGHLHLSEDVYGY 612


>gi|306840472|ref|ZP_07473231.1| cell wall degradation protein [Brucella sp. BO2]
 gi|306289487|gb|EFM60705.1| cell wall degradation protein [Brucella sp. BO2]
          Length = 666

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 246 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ETDPSAYLHGFQPDNA 304

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 305 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 362

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 363 VLAAHADARVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 422

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 423 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 481

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 482 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 540

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 541 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 600

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 601 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|254719057|ref|ZP_05180868.1| cell wall degradation protein [Brucella sp. 83/13]
          Length = 670

 Score =  353 bits (906), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 250 SARALRYAVDAGEGRIIADRLSGFHDLPRMRVNPKAVLEQLAR-ETDPSAYLRGFQPDNA 308

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 309 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 366

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 367 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 426

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 427 LR-WLPHDFGKRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 485

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 486 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-VNGKKVSASAVNWSAVATGKAHIGIRQ 544

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 545 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 604

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 605 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|23501845|ref|NP_697972.1| hypothetical protein BR0962 [Brucella suis 1330]
 gi|23347781|gb|AAN29887.1| conserved hypothetical protein [Brucella suis 1330]
          Length = 572

 Score =  352 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 152 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 210

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 211 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPANYLAQHRD 268

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 269 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 328

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 329 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 387

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 388 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 446

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 447 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 506

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 507 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 555


>gi|256369387|ref|YP_003106895.1| hypothetical protein BMI_I960 [Brucella microti CCM 4915]
 gi|255999547|gb|ACU47946.1| hypothetical protein BMI_I960 [Brucella microti CCM 4915]
          Length = 572

 Score =  352 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 152 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 210

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 211 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 268

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 269 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 328

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 329 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 387

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 388 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 446

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 447 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 506

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 507 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 555


>gi|306838973|ref|ZP_07471795.1| cell wall degradation protein [Brucella sp. NF 2653]
 gi|306405940|gb|EFM62197.1| cell wall degradation protein [Brucella sp. NF 2653]
          Length = 666

 Score =  352 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 246 SARALRYAVDAGEGRIIADRLSGFHDLPRMRVNPKAVLEQLAR-ETDPSAYLRGFQPDNA 304

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 305 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 362

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 363 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 422

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 423 LR-WLPHDFGKRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 481

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 482 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-VNGKKVSASAVNWSAVATGKAHIGIRQ 540

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 541 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 600

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 601 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|265984050|ref|ZP_06096785.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|264662642|gb|EEZ32903.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
          Length = 660

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 240 SARALRYAVDAGEGRIIADRLSGFHDLPRMRVNPKAVLEQLAR-ETDPSAYLRGFQPDNA 298

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 299 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 356

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 357 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 416

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 417 LR-WLPHDFGKRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 475

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 476 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-VNGKKVSASAVNWSAVATGKAHIGIRQ 534

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 535 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 594

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 595 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|299132062|ref|ZP_07025257.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
 gi|298592199|gb|EFI52399.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
          Length = 710

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 88/323 (27%), Positives = 149/323 (46%), Gaps = 28/323 (8%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V  LR +L ++            +DA V +AV+ FQ  + L  +G++D+ T+ A+
Sbjct: 342 MDDARVPALRAKLGVT-----ENASDTHYDATVAAAVRKFQSANDLKATGVLDNHTVAAL 396

Query: 166 NVPVDLR-IRQLQVNLMRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           N P + R I  ++VN+ R + L        +G  YV++NIP  SL+ + NG    ++ V+
Sbjct: 397 NGPRNDRKIDIIRVNMERWRWLPRDLGAPALGDAYVILNIPDYSLQLMHNGATAWKTRVV 456

Query: 221 VGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           VG+     TP+L   +  I  NP W +P SII  + +  L+QDP  L+   + +      
Sbjct: 457 VGKPGKHATPLLTETMKYITVNPTWNVPPSIIYNEYLPALQQDPTVLERMGLKLQRNPDG 516

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            + +                Q PG+ NA+   +  F ++   Y HDTP+  LF    R  
Sbjct: 517 TIRIS---------------QPPGEANALGRIRFNFPNKFLVYQHDTPDKYLFAKSERAF 561

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWS 397
           + GC+RV+N       +L        Y  E++  +       + L T +PV+  Y +A+ 
Sbjct: 562 SHGCMRVQNPDQYAATILGIALPKDHYTPEKIRSMYGHNEININLPTPLPVNITYQTAFV 621

Query: 398 PKDSIIQFRDDIYGLDNVHVGII 420
                ++FR DIYG D   + ++
Sbjct: 622 DDAGKLEFRKDIYGRDATMIKLL 644


>gi|254701720|ref|ZP_05163548.1| cell wall degradation protein [Brucella suis bv. 5 str. 513]
 gi|261752272|ref|ZP_05995981.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|261742025|gb|EEY29951.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
          Length = 634

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 214 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 272

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 273 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 330

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 331 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 390

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 391 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 449

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 450 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 508

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 509 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 568

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 569 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|300023955|ref|YP_003756566.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525776|gb|ADJ24245.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 743

 Score =  352 bits (903), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 159/365 (43%), Gaps = 41/365 (11%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG     V  LR+RL +      S   +  +D  +  AVK +Q  +GL P G+V +
Sbjct: 330 KVLRLGTRDDQVALLRQRLKV---PSESPDANDLYDDALLDAVKDYQRANGLTPDGLVGN 386

Query: 160 STLEAMN-------VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
               A+N       +     + +L VN+ R +  L + +G  YV+ NIP  + E     +
Sbjct: 387 GVRNALNGGGKSKRIDPARNVDRLIVNMERWR-WLPENLGSFYVMNNIPEYTSEIWRGKE 445

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ--DPQY----- 265
             L   +IVG+    TP+L + +  ++F P W +P  I  K++   L+Q  +  Y     
Sbjct: 446 RVLNQRMIVGQPSWPTPVLTASMQYVIFRPSWGMPDGIKAKELAPRLKQASNTGYDFFDQ 505

Query: 266 ---------------LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
                          L+   + +    G+ V    V+WN+ +   + F Q PG  N +  
Sbjct: 506 LFGGGGGGNSGGARVLQAYKLQV-SFNGRPVDPNSVNWNTADIRRYSFVQPPGPDNPLGM 564

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++++ YMHDTPE  LF    R  + GC+RV +       +L++   +S   + E
Sbjct: 565 VKFRFPNKHDVYMHDTPERGLFGQANRALSHGCLRVGDPRRTAEVILQEDKGYSAEKVGE 624

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII-----PLPED 425
           +        V L+  VPV+ VY +A   +D  ++   DIYG DN  +  +          
Sbjct: 625 LWNGGA--DVTLSKPVPVYLVYFTARVDEDGKLRTYGDIYGNDNRVMSALRGHPVRYNAP 682

Query: 426 HPIDS 430
             ID 
Sbjct: 683 EAIDP 687


>gi|241767412|ref|ZP_04765115.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax delafieldii 2AN]
 gi|241361827|gb|EER58083.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax delafieldii 2AN]
          Length = 322

 Score =  351 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 94/306 (30%), Positives = 149/306 (48%), Gaps = 8/306 (2%)

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL         +D  +++ VK FQ RH L   G++   TL+A+ VP   R RQ+++ + R
Sbjct: 1   DLPADARPPALYDEALQNGVKAFQERHALATDGVIGKGTLDALAVPPAARARQIELAMER 60

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVE--NGKVGLR--STVIVGRV-DRQTPILHSRINR 237
           ++       G R ++VNIP   L A E  NG+V L+    VIVG+  D +TP+    +  
Sbjct: 61  LR-WTPLLRGPRMIVVNIPEFVLRAYEVHNGQVSLQLAMKVIVGKALDTRTPLFDEDMRF 119

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE-VFVEEVDWNSPEPPNF 296
           I F+PYW +P SI + + +  LR+DP Y     +  +   G+    +     ++      
Sbjct: 120 IEFSPYWNVPPSIARSETIPRLRRDPGYFDQQGLEFVGANGQVHTALAAEHLDAVLRGQM 179

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             RQ PG  NA+   K  F + +N Y+H TP P LF    R  + GCVRV + + L  ++
Sbjct: 180 RIRQRPGPKNALGDIKFVFPNNSNIYLHHTPAPALFQRDRRDFSHGCVRVEDPVALAQFV 239

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           L++ P W    I E +   ++  ++LA  +PV   Y +A   K     F  D+YG D + 
Sbjct: 240 LRNDPAWPEPRIREAMARGQSATLRLAEPLPVVIAYSTAIV-KQGKPHFFADLYGQDKLL 298

Query: 417 VGIIPL 422
              +  
Sbjct: 299 DQALRQ 304


>gi|316935702|ref|YP_004110684.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603416|gb|ADU45951.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 743

 Score =  351 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 100/426 (23%), Positives = 171/426 (40%), Gaps = 41/426 (9%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK-E 73
               ++          +H S +   I    H I   +    +        +        +
Sbjct: 266 LTESMMDYARQAQSGRMHWSQVSADIQYPEHPIDPAQVLATVTTAADASAALDSYNPPHK 325

Query: 74  TIAQTEKAIAFYQ--------DILSRGGWPELPIRPLHLGNS--SVSVQRLRERLIISGD 123
              + +K +A  +         I         P              V +LR RL ++  
Sbjct: 326 LYRELKKKLAELRGESDKPAIKIAEGETLRYQPAGKKRAEVKIDDPRVPQLRARLGVT-- 383

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMR 182
                  S  +DA V +AV+ FQ    L  +G++D  T++A+N P   R I  + VN+ R
Sbjct: 384 ---ENTDSATYDAAVAAAVRKFQHSADLKATGVLDDRTVKALNTPKRDRTIDTILVNMER 440

Query: 183 IKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-DRQTPILHSRINR 237
            + L  Q     +   YV++N+P  +L+ ++NG+    + V+VG+     TP+L   +  
Sbjct: 441 WRWLPRQLGAPALDDAYVILNVPDYTLKLMQNGEQVWSTRVVVGKPGKHATPLLTETMKY 500

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
           I  NP W +P SII  + +  L+QDP  L    + +   +   + +              
Sbjct: 501 ITVNPTWNVPPSIINNEYLPALQQDPTVLDRMGLKLSRNRDGSIHIS------------- 547

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
             Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL
Sbjct: 548 --QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFGRDERAFSHGCMRVQNPDQYAAALL 605

Query: 358 K---DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                   ++   I   +  R    +K AT +PV+  Y +A+   D  +Q R DIYG D 
Sbjct: 606 NIAMPDKNYTPARI-RSMYGRSEVDLKFATPIPVNITYQTAFVDDDGKLQLRKDIYGRDA 664

Query: 415 VHVGII 420
             + ++
Sbjct: 665 AMLALL 670


>gi|225627441|ref|ZP_03785478.1| cell wall degradation protein [Brucella ceti str. Cudo]
 gi|254706835|ref|ZP_05168663.1| cell wall degradation protein [Brucella pinnipedialis M163/99/10]
 gi|254714056|ref|ZP_05175867.1| cell wall degradation protein [Brucella ceti M644/93/1]
 gi|254716887|ref|ZP_05178698.1| cell wall degradation protein [Brucella ceti M13/05/1]
 gi|225617446|gb|EEH14491.1| cell wall degradation protein [Brucella ceti str. Cudo]
          Length = 670

 Score =  351 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 250 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 308

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 309 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 366

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R
Sbjct: 367 VLAAHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMER 426

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 427 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 485

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 486 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 544

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 545 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 604

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 605 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|256254952|ref|ZP_05460488.1| cell wall degradation protein [Brucella ceti B1/94]
          Length = 670

 Score =  351 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 250 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 308

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 309 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 366

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R
Sbjct: 367 VLAAHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMER 426

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 427 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 485

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 486 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 544

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 545 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 604

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 605 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|260566489|ref|ZP_05836959.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
 gi|260156007|gb|EEW91087.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
          Length = 634

 Score =  351 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 174/414 (42%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 214 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 272

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 273 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPANYLAQHRD 330

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 331 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 390

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 391 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 449

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 450 SWGVPRSIILNEMLPKVMRDTSYLDRNGYKVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 508

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 509 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 568

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 569 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|260168681|ref|ZP_05755492.1| cell wall degradation protein [Brucella sp. F5/99]
          Length = 666

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 246 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 304

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 305 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 362

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R
Sbjct: 363 VLAAHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMER 422

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 423 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 481

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 482 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 540

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 541 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 600

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 601 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|222086217|ref|YP_002544749.1| hypothetical protein Arad_2690 [Agrobacterium radiobacter K84]
 gi|221723665|gb|ACM26821.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 633

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 97/382 (25%), Positives = 169/382 (44%), Gaps = 21/382 (5%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSVSVQR 113
           A  D     +    S +   + +  +A  +   S  G   + I     L  G SS  +  
Sbjct: 254 ASPDAAAYLNSRSPSNQQFTELKAELAKLKGANSTNG-SNISISLTGILKPGGSSPEMTN 312

Query: 114 LRERLIISGD--LDPSKGLSVA-------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           + + +   G   L  +   ++A       +   + + V+ FQ   GL   G++  S++ A
Sbjct: 313 IVKAIQHRGSDVLKTAHAATLASYQGTPDYTPDLVALVEDFQKEKGLTSDGVIGQSSVRA 372

Query: 165 MNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           M     D +I++L + + +++  L  ++G RYVL+N PA  +    N +  L   V+VG 
Sbjct: 373 MVGENSDAKIQKLVIAMEQLR-WLPNELGSRYVLINQPAFMVYYHNNNQEQLSMRVVVGG 431

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
              QT     +I  + FNP+W +P+SII  +M+  LR DP YL      + +  G+ V  
Sbjct: 432 KQHQTFFFEDQIQTVEFNPFWGVPQSIIINEMLPKLRADPNYLDRMGYQV-EVGGRAVAS 490

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
             VDW      +   RQ P   NA+   KI F + +  YMHDTP+   F   +R  + GC
Sbjct: 491 SSVDWYG-STKSVAVRQPPSSDNALGELKILFPNSHAIYMHDTPQKSFFKKDMRALSHGC 549

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           VR+ +   +   +L      +   I + +   +   V +  +VP++  Y +AW  KD ++
Sbjct: 550 VRLADPRAMAAAVLNT----TVADIAKQIAGGQNKAVAVPQKVPIYIAYFTAWPNKDGVV 605

Query: 404 QFRDDIYGLDNVHVGIIPLPED 425
           Q+ +D+Y  D      +     
Sbjct: 606 QYFNDVYDRDAATQKALDATTK 627


>gi|256159684|ref|ZP_05457437.1| cell wall degradation protein [Brucella ceti M490/95/1]
          Length = 666

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 246 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 304

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 305 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 362

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R
Sbjct: 363 VLAAHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMER 422

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 423 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 481

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 482 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 540

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 541 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 600

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 601 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|239831842|ref|ZP_04680171.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239824109|gb|EEQ95677.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 670

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 95/429 (22%), Positives = 170/429 (39%), Gaps = 27/429 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKET 74
               L   +   E  + A  L    +   + +      +   +  D            E 
Sbjct: 250 SARALRYAIDAGEGRVIADRLSGFHDLPRNRVDPKAVLEKLASESDPAAYLHGFQPDNEQ 309

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSVS---VQRLRERLIISGDLDP-- 126
            A  +  +A             + I     +  G+++     V  L  R   +  L    
Sbjct: 310 YAALKSELAN----TEPPSAEPIRISLNGVIKPGDANPQLGKVVALISRHAPASYLAEHR 365

Query: 127 ----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL-RIRQLQVNLM 181
               +      +D  + +A+K +Q   G  P G++  +TL A+       +  ++  ++ 
Sbjct: 366 QVLDAHANGDVYDPELVAAIKDYQKLSGSTPDGVIGRNTLSALQGEQSSIKRDRILYSME 425

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++  L    G RYV+VN PA   E  E+GK  L   V++G    QT   ++++  ++FN
Sbjct: 426 RLR-WLPHDFGTRYVMVNQPAYRAEYFEDGKEKLAMNVVIGSPSHQTYFFYNKVQTVVFN 484

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFR 299
           P W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          R
Sbjct: 485 PSWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ADGKKVSASAVNWSAVAAGKAHVGIR 543

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q P   NA+   KI F + ++ YMHDTP    F+  +R  + GC+R+    D+   ++  
Sbjct: 544 QKPSLDNALGELKILFPNSHDIYMHDTPAKSYFSRDMRALSHGCIRLERPRDMAAAVMGT 603

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
           T      +       +    +K+   VPV+  Y +AW      I++  D+Y  D+     
Sbjct: 604 TVQDLDKYF-----GKNERGIKVKEPVPVYISYFTAWPDASGQIRYYGDVYDRDSGLQKA 658

Query: 420 IPLPEDHPI 428
                D  +
Sbjct: 659 FDKTADSRL 667


>gi|261218691|ref|ZP_05932972.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|260923780|gb|EEX90348.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
          Length = 660

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 240 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 298

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 299 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 356

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R
Sbjct: 357 VLAAHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMER 416

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 417 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 475

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 476 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 534

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 535 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 594

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 595 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|265998101|ref|ZP_06110658.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
 gi|262552569|gb|EEZ08559.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
          Length = 660

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 240 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 298

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 299 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 356

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R
Sbjct: 357 VLAAHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMER 416

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 417 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 475

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 476 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 534

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 535 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 594

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 595 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|27382242|ref|NP_773771.1| hypothetical protein blr7131 [Bradyrhizobium japonicum USDA 110]
 gi|27355413|dbj|BAC52396.1| blr7131 [Bradyrhizobium japonicum USDA 110]
          Length = 735

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 95/425 (22%), Positives = 169/425 (39%), Gaps = 39/425 (9%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE- 73
               +           +H S +   I    H +        +        +       + 
Sbjct: 260 LTASMFDYARQAQSGRMHWSQVSADILYPEHPVDPSEVLAKVTTAADASAALDSYNPPQK 319

Query: 74  TIAQTEKAIAFYQ--------DILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGD 123
              + +  +A  +        +I         P       +      V +LR +L I+  
Sbjct: 320 LYKELKAKLAELRGQGSGPVIEIADGPALKYTPAGKKQAEIVVEDPRVPQLRAKLGIT-- 377

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV-DLRIRQLQVNLMR 182
                     +DA V  AV+ FQ    +  +G++D  T++A+N P  D +I  + VN+ R
Sbjct: 378 ---ENASDTRYDAAVAEAVRKFQNGAEIKATGILDDKTVKALNTPKRDKQIDTVLVNMER 434

Query: 183 IKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-DRQTPILHSRINR 237
            + L        +G  YV++NIP  +L+ ++ G+    + V+ G+     TP+L   +  
Sbjct: 435 WRWLPRDLGVPSLGDAYVILNIPDYTLKVMQRGQPVWTTRVVTGKPGQHATPLLTETMKY 494

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
           I  NP W +P SI+  + +  L+QDP  L+   + +   +   V +              
Sbjct: 495 ITVNPTWNVPPSIVYNEYLPALQQDPTVLQRMGLKLEQNRDGSVHIS------------- 541

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
             Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL
Sbjct: 542 --QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAKEDRAFSHGCMRVQNPDQYASVLL 599

Query: 358 KDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
                  +Y  E V  +  +    +K  T +PV+  Y +A+      +QFR D+YG D+ 
Sbjct: 600 NIAMPNEKYTPERVRSMYGKSEIDLKFPTPIPVNITYQTAFVDDAGKLQFRKDVYGRDST 659

Query: 416 HVGII 420
            + I+
Sbjct: 660 MINIL 664


>gi|265994887|ref|ZP_06107444.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|262766000|gb|EEZ11789.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
          Length = 538

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 118 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 176

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 177 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 234

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R
Sbjct: 235 VLAAHADASVYDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMER 294

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 295 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 353

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 354 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 412

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 413 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 472

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 473 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 521


>gi|260563978|ref|ZP_05834464.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
 gi|265991052|ref|ZP_06103609.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|260153994|gb|EEW89086.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
 gi|263001836|gb|EEZ14411.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 538

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 118 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 176

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 177 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 234

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R
Sbjct: 235 VLAAHADASVYDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMER 294

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 295 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 353

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 354 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 412

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 413 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 472

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 473 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 521


>gi|254710055|ref|ZP_05171866.1| hypothetical protein BpinB_07218 [Brucella pinnipedialis B2/94]
 gi|256031550|ref|ZP_05445164.1| hypothetical protein BpinM2_12995 [Brucella pinnipedialis
           M292/94/1]
 gi|261317602|ref|ZP_05956799.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|265988636|ref|ZP_06101193.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
 gi|261296825|gb|EEY00322.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|264660833|gb|EEZ31094.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
          Length = 556

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 136 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 194

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 195 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 252

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R
Sbjct: 253 VLAAHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMER 312

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 313 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 371

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 372 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 430

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 431 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 490

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 491 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 539


>gi|256113506|ref|ZP_05454340.1| cell wall degradation protein [Brucella melitensis bv. 3 str.
           Ether]
          Length = 531

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 111 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 169

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 170 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 227

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R
Sbjct: 228 VLAAHADASVYDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMER 287

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 288 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 346

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 347 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 405

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 406 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 465

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 466 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 514


>gi|17987297|ref|NP_539931.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
 gi|256044628|ref|ZP_05447532.1| cell wall degradation protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|17982976|gb|AAL52195.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
          Length = 531

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 111 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 169

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 170 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 227

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R
Sbjct: 228 VLAAHADASVYDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMER 287

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 288 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 346

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 347 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 405

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 406 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 465

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 466 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 514


>gi|304392206|ref|ZP_07374148.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303296435|gb|EFL90793.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 694

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 89/388 (22%), Positives = 162/388 (41%), Gaps = 23/388 (5%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP---LHLGNSSVS 110
                            +  +    ++ +A    ++  G    + I+    +  G ++  
Sbjct: 304 KLAEEAAPATVLASAHPADASYTALKRELATL--LIEAGDVKIITIKSGTFIRPGGTNDQ 361

Query: 111 VQRLRER--LIISGDLDPSKGLSVAFD-------AYVESAVKLFQMRHGLDPSGMVDSST 161
           V  + E   L +S +       ++  D             V+ FQ + GL P G+V  +T
Sbjct: 362 VASIVEAISLKMSAEERAEAFDALMMDYSDGVYIEEAVELVRAFQKKSGLKPDGIVGKNT 421

Query: 162 LEAMNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           L  +       +I ++++ + R++      +G R+V +N PA     +  GK  +    +
Sbjct: 422 LARLKFDSPKTKIDKVRLAMERLR-WHPDSLGSRHVFINQPAYRATLMNGGKPQISMRAV 480

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG+   QT   H  I  + FNPYW IPRSI+  +M+  LR++P +  +    +  + G+ 
Sbjct: 481 VGKPQHQTNFFHDEIEYVEFNPYWGIPRSILVNEMLPKLRRNPSHFDNLGYEVTTQGGRR 540

Query: 281 VFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           +    VD       NF +  RQ PG  NA+   KI F +++  YMHDTP   LF    R 
Sbjct: 541 ISSSSVD-WWSVGSNFPYNVRQPPGPKNALGELKIMFPNKHAIYMHDTPAKSLFKREKRA 599

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GCVR+ +   +   +L          +   +  R+    +L T++PV   Y +AW  
Sbjct: 600 YSHGCVRLADPRAMAAAVLGTR----VDDVSAEIFDRQNKTRRLKTKLPVFVSYFTAWPT 655

Query: 399 KDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
            D  +++  D+Y  D   +  + +    
Sbjct: 656 ADGKVEYFGDVYQRDTALLKAMSMEAKA 683


>gi|114570411|ref|YP_757091.1| peptidoglycan binding domain-containing protein [Maricaulis maris
           MCS10]
 gi|114340873|gb|ABI66153.1| Peptidoglycan-binding domain 1 protein [Maricaulis maris MCS10]
          Length = 539

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 170/345 (49%), Gaps = 7/345 (2%)

Query: 86  QDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + +     WP +   P L  G+    V +LR RL   G LD        +D  +E+AV+ 
Sbjct: 178 RVLAVTPIWPGVQSGPSLSAGDVGGRVDQLRTRLTAEGLLDGDWQEGDHYDIRLETAVRR 237

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           +Q R  L PSG +D +TL  +N+P D RI QL  NL + ++   + +G R++ VN+    
Sbjct: 238 YQGRTNLAPSGRMDQATLRQLNLPPDRRIGQLMANLEQ-RRWRTRDLGRRHIWVNLADFR 296

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           LEA E+G++     V+VGR    TP     +  I+ NP+W +P    +       R++P 
Sbjct: 297 LEAWEDGQLAREHEVMVGRQASSTPEFSEDMQYIVLNPWWGLPNGSARPRFQ-SFRRNPS 355

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTY 322
             ++    + +  G+ + V E+DW+     ++ +R  Q PG  N M   K  F +RNN Y
Sbjct: 356 LARELGFRIYNRSGEAISVYEIDWSR-WGGDWPYRMSQPPGATNPMGEVKFIFPNRNNIY 414

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDT E   F    R  ++GC+RV++ + L  W+L     WSR  I+EVV     T V L
Sbjct: 415 IHDTTERDQFVRTRRDFSAGCIRVQDPLALAQWVLDGQDGWSRARIDEVVAGSSPTVVWL 474

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLD-NVHVGIIPLPEDH 426
              +PVH  Y +     D  +++ +D+Y  D  V    +   E H
Sbjct: 475 DDRIPVHIAYWTVVGDPDGRVRYLNDLYRRDSGVIDAYLAAHESH 519


>gi|319783599|ref|YP_004143075.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169487|gb|ADV13025.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 629

 Score =  349 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 87/334 (26%), Positives = 158/334 (47%), Gaps = 17/334 (5%)

Query: 102 LHLGNSSVSVQRL----RERL-----IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           L  G +S  + +L       L        G++      S  +D  +   +K  Q + G+ 
Sbjct: 295 LKPGETSPELPKLLTLIARNLDDEMGGAYGEVLSRLATSDVYDPELVPVIKAVQQKAGMK 354

Query: 153 PSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
             G++   T+ ++       ++ +++V L  ++  L   +G   V +N PA +   ++NG
Sbjct: 355 GDGVIGPRTVASLAGTSKADKLLKVEVALEELR-WLPSDLGSPRVFINQPAFTASYIDNG 413

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +  LR+ V+VGR   QT   + +I ++ F+PYW +P+SII  +M+  LR DP YL     
Sbjct: 414 EEKLRTRVVVGRTTNQTSFFYDQIKQVDFHPYWGVPQSIIVNEMLPRLRNDPGYLDRAGY 473

Query: 272 HMIDEKGKEVFVEEVDWNSPEPP-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
            + D +GK +    V+W +      +  RQ P + NA+   KI F +++  YMHDTP+  
Sbjct: 474 EVTDSRGKRIPSSAVNWGAYGSNIPYSVRQQPSEANALGELKILFPNKHAIYMHDTPQKS 533

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
            F   +R  + GCVR+++   +   +L      S  +I E +K    T   +   +PV+ 
Sbjct: 534 FFQRDMRALSHGCVRLQDPRGMAAAVLGT----SVDYIAEKLKHGHATE-NVTRTIPVYV 588

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
            Y +AW      +++  D+Y  D+     + + E
Sbjct: 589 AYFTAWPDLSGKVEYFGDVYDRDSRLKQALDVTE 622


>gi|307318578|ref|ZP_07598012.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306895918|gb|EFN26670.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
          Length = 631

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 91/380 (23%), Positives = 159/380 (41%), Gaps = 27/380 (7%)

Query: 52  FDNFLARVDMGIDSDIPIISKE----TIAQTEKAIAFYQDILSRGGWPELPIRP---LHL 104
              FL +++   D    + S+           + +   +  +     P + I P   L  
Sbjct: 243 LLGFLEKIETSSDVAALVESQNPKSAQFTALRQELERLRTQVEAA--PRVEIAPGTLLKP 300

Query: 105 GNSSVSVQRLRE--RLIISGDLDPSKGL-------SVAFDAYVESAVKLFQMRHGLDPSG 155
           G S+  +  +    +L  S  L     +       +  +   +   V+ FQ  +GL   G
Sbjct: 301 GESNPELANVIAGIKLKASEALKTEHAVVLAAYEGTPDYTPELVPLVEAFQKEYGLKADG 360

Query: 156 MVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           +V  +++ A+        +I ++++ + + +  L   +G RYV +N PA +    E G  
Sbjct: 361 IVGQASIRALTGGDTTQGKIDKVEIAMEQAR-WLPDGLGDRYVFINQPAFTASYTEQGTE 419

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
                V+VG    QT      I  +  NPYW +P+SII  +M+  LR DP YL      +
Sbjct: 420 QFSMRVVVGSKANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKLRNDPGYLDRMGYQV 479

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
            +  G+ V    V+W      +   RQ P   NA+   KI F + +  YMHDTP    F 
Sbjct: 480 -EVGGRVVPSTAVNWYG-STNSIAVRQPPSSDNALGELKILFPNAHAIYMHDTPSKSFFK 537

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
              R  + GCVR+ +   +   +L      S   +   +   +   + ++ +VPV+  Y 
Sbjct: 538 RDQRALSHGCVRLADPRRMAAAVL----GVSVDEVGMEISGGRNKALPVSAKVPVYVAYF 593

Query: 394 SAWSPKDSIIQFRDDIYGLD 413
           +AW  KD  +++ DD+Y  D
Sbjct: 594 TAWPNKDGTVEYFDDVYERD 613


>gi|110637821|ref|YP_678028.1| hypothetical protein CHU_1417 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280502|gb|ABG58688.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 568

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 182/351 (51%), Gaps = 9/351 (2%)

Query: 75  IAQTEKAIAFYQDILSRGGW--PELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            A  + A+    D L   G+   E+P   + L  G++S  +  +++RL  + +   ++ L
Sbjct: 220 YASLQTALIN-ADSLEANGFTSKEIPYIGKKLVKGDTSFVILEVKKRLQATTEYSFNE-L 277

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           +  FD  +  +VK+FQ   GL  +G++D +TL  +N         ++ N+ R +     +
Sbjct: 278 NNVFDEQLFQSVKIFQEHVGLHGTGVIDKTTLAKLNYTPAQIRNTIRANMERCR-WFSNE 336

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +   Y+LVNIP  +L   +NGKV    TVIVG+   QTP+  + I+ + FNPYW +PRSI
Sbjct: 337 LPNEYILVNIPDYTLSHFKNGKVIYNETVIVGKQLNQTPVFQATISNVEFNPYWTVPRSI 396

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             K+++  L++DPQYL+ +N+ +++   +          S     F  ++ PG  N++  
Sbjct: 397 AVKEILPSLKKDPQYLEKHNMFLMEGDKEIASPPSFAGYSDSYFPFTIKEKPGPKNSLGQ 456

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F +  + YMHDTP   LF+N VR  + GC+R+ N +     LL      +   I+E
Sbjct: 457 VKFSFPNPYSIYMHDTPAKYLFDNDVRSYSHGCIRLHNPLKFADHLLS-QQGVTEKRIDE 515

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPK-DSIIQFRDDIYGLDNVHVGII 420
           +V++ K   + L T++P+   Y + ++ K D+ + F  D+Y  D   +  +
Sbjct: 516 IVQSEKNYVMALETKMPIMISYFTCYTKKGDNRLYFFYDVYDSDKKIIEGL 566


>gi|15965611|ref|NP_385964.1| hypothetical protein SMc00150 [Sinorhizobium meliloti 1021]
 gi|307302730|ref|ZP_07582486.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|15074792|emb|CAC46437.1| Putative membrane protein [Sinorhizobium meliloti 1021]
 gi|306903094|gb|EFN33685.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 631

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 91/380 (23%), Positives = 159/380 (41%), Gaps = 27/380 (7%)

Query: 52  FDNFLARVDMGIDSDIPIISKE----TIAQTEKAIAFYQDILSRGGWPELPIRP---LHL 104
              FL +++   D    + S+           + +   +  +     P + I P   L  
Sbjct: 243 LLGFLEKIETSSDVAALVESQNPKSAQFTALRQELERLRTQVEAA--PRVEIAPGTLLKP 300

Query: 105 GNSSVSVQRLRE--RLIISGDLDPSKGL-------SVAFDAYVESAVKLFQMRHGLDPSG 155
           G S+  +  +    +L  S  L     +       +  +   +   V+ FQ  +GL   G
Sbjct: 301 GESNPELANVIAGIKLKASEALKTEHAVVLAAYEGTPDYTPELVPLVEAFQKEYGLKADG 360

Query: 156 MVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           +V  +++ A+        +I ++++ + + +  L   +G RYV +N PA +    E G  
Sbjct: 361 IVGQASIRALTGGDTTQGKIDKVEIAMEQAR-WLPDGLGDRYVFINQPAFTASYTEQGTE 419

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
                V+VG    QT      I  +  NPYW +P+SII  +M+  LR DP YL      +
Sbjct: 420 QFSMRVVVGSKANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKLRNDPGYLDRMGYQV 479

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
            +  G+ V    V+W      +   RQ P   NA+   KI F + +  YMHDTP    F 
Sbjct: 480 -EVGGRVVPSTAVNWYG-STNSIAVRQPPSSDNALGELKILFPNAHAIYMHDTPSKSFFK 537

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
              R  + GCVR+ +   +   +L      S   +   +   +   + ++ +VPV+  Y 
Sbjct: 538 RDQRALSHGCVRLADPRRMAAAVL----GVSVDEVGMEISGGRNKALPVSAKVPVYVSYF 593

Query: 394 SAWSPKDSIIQFRDDIYGLD 413
           +AW  KD  +++ DD+Y  D
Sbjct: 594 TAWPNKDGTVEYFDDVYERD 613


>gi|254500817|ref|ZP_05112968.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222436888|gb|EEE43567.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 658

 Score =  349 bits (895), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 95/425 (22%), Positives = 175/425 (41%), Gaps = 19/425 (4%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIV-NDRFDNFLARVDMGIDSDIPIISKE 73
                L   L      I  + + +  +   H +      + F A  ++    +      +
Sbjct: 231 LSAAALTYVLDATRGRIDPNRISQYHDLPRHDVDLVGALEEFTASDNVATALEAHQPQSD 290

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVS----VQRLRER----LIISGDL 124
              +    +A  +          +     L  G SS      V  + +     L    + 
Sbjct: 291 HFKKLSAELARLKAEDEESDQIVIAPGTFLKAGKSSPEMKNIVAAISKHGSETLKTDHEA 350

Query: 125 DPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV-PVDLRIRQLQVNLMR 182
             +    S  +   + + VK FQ    L   G+V  +T++AM       +I ++++ + R
Sbjct: 351 TLAAYDGSDLYTPELVALVKGFQKEAKLTADGIVGKNTIKAMVGETNAAKIAKVELAMER 410

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            +  L +++G R V +N PA +    + G   +   V+VG+   QT   + +I  + +NP
Sbjct: 411 SR-WLPEELGERKVFINQPAFTATYHQPGTDPMSMRVVVGKKSNQTNFFYDKIEIVEYNP 469

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP--EPPNFIFRQ 300
           YW +P SII  +M+  L  +P YL      +    G++V    VDW +   +  +   RQ
Sbjct: 470 YWGVPYSIIVNEMIPKLAANPSYLDQAGYEVTTPGGRKVSSASVDWYAVANKKKSINVRQ 529

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG+ NA+   KI F +R++ YMHDTP   LFN   R  + GC+R+ +   +   +L  +
Sbjct: 530 YPGRSNALGEVKILFPNRHHIYMHDTPSKSLFNKDTRAFSHGCIRLHDPKGMAAAVLGKS 589

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
             +    +   +   +    K+  ++PV+  Y +AW   D  I F  D+Y  D   +  +
Sbjct: 590 TDY----VSSRIAAGQNAQEKVTGDIPVYVSYFTAWPEADGSIGFYTDVYDRDRYLLKAL 645

Query: 421 PLPED 425
              E+
Sbjct: 646 EKTEE 650


>gi|261314301|ref|ZP_05953498.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|261321811|ref|ZP_05961008.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261758157|ref|ZP_06001866.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
 gi|261294501|gb|EEX97997.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261303327|gb|EEY06824.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|261738141|gb|EEY26137.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
          Length = 634

 Score =  349 bits (895), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 214 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 272

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 273 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 330

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R
Sbjct: 331 VLAAHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMER 390

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 391 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 449

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 450 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 508

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 509 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 568

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 569 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|225852468|ref|YP_002732701.1| peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
 gi|225640833|gb|ACO00747.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
          Length = 510

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 90  SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 148

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 149 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 206

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA++ +Q   G    G++  +T+ A+      +R  ++  ++ R
Sbjct: 207 VLAAHADASVYDPELVSAIQDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMER 266

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 267 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 325

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 326 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 384

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 385 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 444

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 445 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 493


>gi|261222137|ref|ZP_05936418.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|260920721|gb|EEX87374.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
          Length = 634

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 214 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 272

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 273 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 330

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R
Sbjct: 331 VLAAHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMER 390

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 391 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 449

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 450 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 508

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 509 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 568

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 569 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|213963732|ref|ZP_03391982.1| putative peptidoglycan binding domain protein [Capnocytophaga
           sputigena Capno]
 gi|213953612|gb|EEB64944.1| putative peptidoglycan binding domain protein [Capnocytophaga
           sputigena Capno]
          Length = 563

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 97/359 (27%), Positives = 168/359 (46%), Gaps = 14/359 (3%)

Query: 76  AQTEKAIAFYQDILSR--GGWPEL--PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
            Q E+  A Y+ +  +    +  +  P +    G ++  V +LR  L   G     +  +
Sbjct: 204 KQYEQMKALYKQLKQQVVDTFITVDFPAKDFVYGYTAPIVVQLRNSLKQKGFEAAPEIEA 263

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
              D+ +   V+ FQ  +GL   G++   TL  +N+        LQ+N+ R++      +
Sbjct: 264 QMVDSTLIRTVQRFQKSNGLTADGLLGKQTLYFLNMNKTRERDLLQLNMERMRVF-NNDL 322

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G  Y LVNIP   L       +  ++ V+VGR +  TPI    I  + F P W +P+SII
Sbjct: 323 GEHYALVNIPDFKLSLFHKDSLQFQTRVVVGRTETSTPIFTDTIRYVEFRPTWSVPQSII 382

Query: 252 QKDMMALL--RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE--PPNFIFRQDPGKINA 307
           +K+M+  +  + DP+  +     M  EKGK+V    +DW  P      F F + P   N+
Sbjct: 383 KKEMLPQIISQADPEKYQKRGYTMY-EKGKKVDPTTIDWTDPSVHKRGFHFVEAPSANNS 441

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT---WS 364
           +   K    +  + Y+HDTP    F    R  + GCVRV+N  +L   LLK+  T   W+
Sbjct: 442 LGLVKFILTNDMSIYLHDTPSKYFFQRDDRALSHGCVRVQNPNELAYHLLKNEATETPWT 501

Query: 365 RYHIEEVVKTRKTTP-VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              + E +  +++   + L T+  ++ +Y +A+  ++  +  ++DIY LDN  +  I  
Sbjct: 502 LEKVNEAMNGKRSQYRIALKTKYKINILYYTAFIDENGELTLKNDIYDLDNEQLKEIKR 560


>gi|265999484|ref|ZP_05466569.2| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
 gi|263094225|gb|EEZ18102.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
          Length = 538

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 118 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 176

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 177 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 234

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA++ +Q   G    G++  +T+ A+      +R  ++  ++ R
Sbjct: 235 VLAAHADASVYDPELVSAIQDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMER 294

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 295 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 353

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 354 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 412

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 413 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 472

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 473 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 521


>gi|213420016|ref|ZP_03353082.1| hypothetical protein Salmonentericaenterica_20520 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 546

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 105/404 (25%), Positives = 163/404 (40%), Gaps = 80/404 (19%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDV 253

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                              
Sbjct: 254 PALREILQRTGMLDGGPKIALPGDNTSDSAVVSPSAVVDETSVAQPVDEPTARRSKPAPA 313

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 314 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 373

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 374 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 431

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 432 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 491

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
           ++   K    S +  Y+HDTP   LF    R  +SGCVR    +
Sbjct: 492 SLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRSIRPL 535


>gi|222148534|ref|YP_002549491.1| hypothetical protein Avi_2078 [Agrobacterium vitis S4]
 gi|221735520|gb|ACM36483.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 614

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 93/388 (23%), Positives = 162/388 (41%), Gaps = 21/388 (5%)

Query: 47  IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI---RPLH 103
            ++   D   +  D+         +       +  +A      ++     + I     L 
Sbjct: 225 NLDPVLDLVRSSPDIAAYLHGRDPASPQFQALKAELAKLVAEANQQQSKPVKINLTGVLK 284

Query: 104 LGNSSVSVQRLRE--------RLIISGDLDPSKGLSVA-FDAYVESAVKLFQMRHGLDPS 154
            G S+  +  + E         L     L  +       +   + + V+ +Q   GL P 
Sbjct: 285 PGGSNPELANIVEGIKTYGSDALKTEHALTLTDYTGTPDYTPELVALVESYQKERGLKPD 344

Query: 155 GMVDSSTLEAMNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           G++  +T+  M       +I +L V + +++  L   +G RYV +N PA       + + 
Sbjct: 345 GVIGQATVRTMVGHSNAEKIEKLVVAMEQLR-WLPADLGPRYVFINQPAFEAYYFNDRQQ 403

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            +   V+VG    QT    + I  + FNPYW +PRSII  +M+  LRQDP YL      +
Sbjct: 404 QIAMKVVVGAPQHQTFFFQNMIQTVEFNPYWGVPRSIIVNEMLPKLRQDPSYLDRLGYEV 463

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
              KG++V   +VDW      +   RQ P   NA+   KI F + +  YMHDTP    F 
Sbjct: 464 -SYKGRKVASSQVDW--YTTSDVDVRQPPSSDNALGDLKILFPNAHAIYMHDTPAKSFFK 520

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
             +R  + GCVR+     +   ++      +   I+  + + +   V++  + PV+  Y 
Sbjct: 521 RDMRALSHGCVRLAEPRVMAAAVMGT----TVEDIDAQIASGQNRAVQVPQKFPVYVAYF 576

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           +AW  KD ++++ DD+YG D        
Sbjct: 577 TAWPDKDGVVRYYDDVYGRDEATRKAFD 604


>gi|326408985|gb|ADZ66050.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M28]
 gi|326538698|gb|ADZ86913.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M5-90]
          Length = 531

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 98/414 (23%), Positives = 173/414 (41%), Gaps = 25/414 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 111 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 169

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 170 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 227

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA++ +Q   G    G++  +T+ A+      +R  ++  ++ R
Sbjct: 228 VLAAHADASVYDPELVSAIQDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMER 287

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 288 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 346

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 347 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 405

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 406 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 465

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 466 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 514


>gi|148258072|ref|YP_001242657.1| hypothetical protein BBta_6864 [Bradyrhizobium sp. BTAi1]
 gi|146410245|gb|ABQ38751.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 702

 Score =  347 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 89/323 (27%), Positives = 148/323 (45%), Gaps = 28/323 (8%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            S   V +LR +L ++          + +DA V +AV+ FQ    L P+G++D  T++A+
Sbjct: 329 MSDPRVPKLRAKLGLT-----ENADDIRYDAKVAAAVRKFQESADLKPTGVLDDRTVKAL 383

Query: 166 NVPV-DLRIRQLQVNLMRIKKLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           N P  D +I  + VN+ R + L        +G  YV++NIP  +L+ ++ G     + V+
Sbjct: 384 NTPKRDKQIDTILVNMERWRWLPRDLGAPALGDAYVILNIPDYTLKVMQRGAQVWTTRVV 443

Query: 221 VGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
            G+     TP+L   +  I  NP W +P SII  + +  L+QDP  L    + +   +  
Sbjct: 444 TGKPGQHATPLLSETMKFITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLRLERARDG 503

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            + +                Q PG+ NA+   +  F ++   Y HDTP+  LF    R  
Sbjct: 504 SIHIS---------------QPPGEANALGRIRFNFPNKFLVYQHDTPDKHLFAREDRAF 548

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWS 397
           + GC+RV+        LL       RY  E +  +       +K  T +PV+  Y +A+ 
Sbjct: 549 SHGCMRVQYPDQYASVLLNIAMPGERYTPERIRSMYGSSEIDLKFPTPIPVNITYQTAFV 608

Query: 398 PKDSIIQFRDDIYGLDNVHVGII 420
                +QFR D+YG D   + I+
Sbjct: 609 DDAGKLQFRKDVYGRDATMISIL 631


>gi|146338286|ref|YP_001203334.1| putative signal peptide [Bradyrhizobium sp. ORS278]
 gi|146191092|emb|CAL75097.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS278]
          Length = 691

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 92/323 (28%), Positives = 153/323 (47%), Gaps = 28/323 (8%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            S   V +LR +L ++ +LD      + +DA V +AV+ FQ    L P+G++D  T++A+
Sbjct: 317 MSDPRVPKLRAKLGLTENLD-----DIRYDAKVAAAVRKFQDSVDLKPTGVLDDRTVKAL 371

Query: 166 NVPV-DLRIRQLQVNLMRIKKLL----EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           N P  D +I  + VN+ R + L        +G  YV++NIP  +L+ +++G     + V+
Sbjct: 372 NTPKRDKQIDTVIVNMERWRWLPRELGAPAIGNAYVILNIPDYTLKVMQHGAQVWTTRVV 431

Query: 221 VGRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
            G+     TP+L   +  I  NP W +P SII  + +  L+QDP  L    + +   +  
Sbjct: 432 TGKPGQHATPLLSETMKFITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLRLERARDG 491

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            + +                Q PG+ NA+   +  F ++   Y HDTP+  LF    R  
Sbjct: 492 SIHIS---------------QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAKEDRAF 536

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV--VKTRKTTPVKLATEVPVHFVYISAWS 397
           + GC+RV+        LL  T    RY  E +  +       +K  T +PV+  Y +A+ 
Sbjct: 537 SHGCMRVQYPDQYASVLLNLTMPGERYTPERIRGMYGSSEIDLKFPTPIPVNITYQTAFV 596

Query: 398 PKDSIIQFRDDIYGLDNVHVGII 420
                +QFR D+YG D   + I+
Sbjct: 597 DDAGKLQFRKDVYGRDATMIAIL 619


>gi|328543832|ref|YP_004303941.1| peptidoglycan binding domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326413576|gb|ADZ70639.1| Putative peptidoglycan binding domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 639

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 100/392 (25%), Positives = 161/392 (41%), Gaps = 25/392 (6%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVS-- 110
                V+  ++S  P    E        +A  +     G   ++ +  L   G  S    
Sbjct: 256 QAAGNVEAFLESRQP--QGEHFKALVAELAALRG-AQEGERIQISLATLLKPGTDSAELA 312

Query: 111 --VQRLRERLIISGDLDPSKGL-------SVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             V  +R+    S  L                +   +   VK FQ  + L P G+V  +T
Sbjct: 313 NIVAAIRK--NGSEALKADHAAILSAYDGGTLYGPELVDLVKAFQKENRLTPDGIVGKAT 370

Query: 162 LEAMNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           + A+       +I +L++ L R +  L + +G R V +N PA +   VE+GK  L   V+
Sbjct: 371 IRALVGDSNADKIAKLELALERSR-WLPEDLGSRRVFINQPAFTATYVESGKAPLAMRVV 429

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG    QT   + +I  + +NPYW +P SII  + +  L  DP YL      +    GK 
Sbjct: 430 VGTKANQTSFFYDQIETVEYNPYWGVPYSIIVNEKLPKLAADPGYLDKIGYEVTTASGKP 489

Query: 281 VFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           +    VDW++          RQ PG  NA+   KI F +++  YMHDTP   LFN  VR 
Sbjct: 490 IPSASVDWHAVATKKLSVNVRQRPGSDNALGELKILFPNKHAIYMHDTPSKSLFNKDVRA 549

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GCVR+ +   +   +L      S+ ++   +   K     +   +PV+  Y +AW  
Sbjct: 550 FSHGCVRLSDPRAMAAAVL----GKSKDYVASRIAGGKNESEDVTGVIPVYVAYFTAWPE 605

Query: 399 KDSIIQFRDDIYGLDNVHVGIIPLPEDHPIDS 430
            D  I +  D+Y  D      +       + +
Sbjct: 606 TDGTIGYYGDVYDRDMYLTRALEATRKTRLQA 637


>gi|254420106|ref|ZP_05033830.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
 gi|196186283|gb|EDX81259.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
          Length = 520

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 101/419 (24%), Positives = 179/419 (42%), Gaps = 32/419 (7%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKET 74
               L  G  L E  +    ++++     + +   R   + LAR  +    +    +   
Sbjct: 112 TAAALAYGRVLAEGKVRPETVEDLWEMQKNRVDLPRGLSDALARNILLDWFEGLAPTDIG 171

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL--- 130
                     Y+ + ++GGWP  P  P +    S   +  L +RL   GDL  + G    
Sbjct: 172 YQNLSAGYVRYRRLAAQGGWPAFPAGPTIEPNMSDRRIPALIDRLTAEGDLTAANGARLK 231

Query: 131 --SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              + + + ++ AV+ FQ+RHGL   G + + T  +++   + R RQ+ +NL R ++ L+
Sbjct: 232 TEGLTYGSELQQAVQGFQVRHGLGADGRIGTGTQRSLSASAEDRARQIALNLER-RRWLK 290

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           + +    + VN  AA +   ++GK    + VIVG  + QTP L      ++ NP W +P 
Sbjct: 291 RDVAPERIEVNTAAAIMVYWKDGKPVHSNRVIVGSAENQTPSLEKPFASVVANPPWYVPA 350

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI +++++      P YL  N++++ +                        Q  G   A+
Sbjct: 351 SIARREILPK---GPAYLAANDMYVQNG--------------------TVIQRAGPKAAL 387

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K E       ++HDTP    FN  +R  + GCVRV+N ++    LL   P       
Sbjct: 388 GYVKFELRDSYAIFLHDTPSKAAFNLSMRQRSHGCVRVQNAVEFARLLLSPDPV-KLAQF 446

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
           +    TR+TT V    E+ V  +Y +A+      + FR+D+YG D+     + +    P
Sbjct: 447 DTAQDTRETTRVTTGREISVRLLYWTAFVDGQGRVAFREDVYGRDDKLAQALGIAVSLP 505


>gi|228472762|ref|ZP_04057520.1| peptidoglycan-binding domain 1 protein [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228275813|gb|EEK14579.1| peptidoglycan-binding domain 1 protein [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 559

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 81/361 (22%), Positives = 153/361 (42%), Gaps = 12/361 (3%)

Query: 72  KETIAQTEKAIAFYQDILSRGG-----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           +      +     Y+++          +    ++   +G +  ++  LR  L   G   P
Sbjct: 197 QPQQPFYKAMAQRYRELEKDTAEVLTPFAITDLKSYTIGYADSTILALRACLKHKGYESP 256

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
            +      D+ +  AVK FQ   G+   G+  + T+  + +    +   L +N+ R++  
Sbjct: 257 VQENPEQVDSLLVEAVKDFQRSIGIPADGVPGAQTMGYLLMTAKEKRDLLLLNMERLR-W 315

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             + +G  Y+LVNIP   L       +  ++ V+VG  +  TPI    +  + F P W +
Sbjct: 316 HNKDLGEDYILVNIPEYRLRLFHKDSLVFQTRVVVGNPETPTPIFSDSLRYVEFRPTWSV 375

Query: 247 PRSIIQKDMMALLRQDPQYL--KDNNIHMIDEKGKEVFVEEVDWNS--PEPPNFIFRQDP 302
           P+SI++K+M+  +      L        +  E  KE+   +V+W+        F F + P
Sbjct: 376 PQSIVRKEMIPNIISSRDSLKYAKRGYKLY-ENNKEIDPAKVNWHDERISKRAFYFVEAP 434

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
            + N++   K   Y+  + Y+HDTP   LF N  R  + GC+RV     L   LL+ +  
Sbjct: 435 SENNSLGLVKFVLYNDMSIYLHDTPSKRLFGNTQRTYSHGCIRVEYPERLATKLLRGSEE 494

Query: 363 WSRYHIEEVVKTR-KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           W    ++E + T      V+      +   Y++AW  ++  +  R+D Y  D   + I+ 
Sbjct: 495 WDAEKVKEAMTTGRDQRRVRPKQHFVIDVSYLTAWVDEEGKLIIRNDPYQFDKEQLKILN 554

Query: 422 L 422
            
Sbjct: 555 R 555


>gi|307946894|ref|ZP_07662229.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
 gi|307770558|gb|EFO29784.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
          Length = 681

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 89/388 (22%), Positives = 167/388 (43%), Gaps = 18/388 (4%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSV 109
              +  A  D+ +         +  ++ +  +A  +          +     L +G SS 
Sbjct: 292 SLRDVQASTDVKVAMKAHQPQDDVFSELQSELAKLRAEDEEEDAIVIAPGTFLKVGRSSP 351

Query: 110 SVQRLRERLIISG---------DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            V+ +   +  +G          L  S      +   + + VK FQ  + L   G+V  +
Sbjct: 352 EVKNIVAAIRKNGSDALREKHMKLLVSYTGENLYSQEIANLVKGFQKENKLAADGIVGKN 411

Query: 161 TLEAMNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           T+ AM       +I ++++ + R ++ L  ++G R V +N PA +    E   + L   V
Sbjct: 412 TIRAMVGETNAAKIAKIELAMER-RRWLPDELGERRVFINQPAFTATFYEGSSLPLSMRV 470

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           +VG+   QT   +  +  + +NPYW +P SII  +M+  L  +P YL      +    G+
Sbjct: 471 VVGKKSNQTNFFYDNVEIVEYNPYWGVPYSIIVNEMIPKLAANPYYLDQAGYEVTTPSGR 530

Query: 280 EVFVEEVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           +V    V+W +          RQ PG  NA+   KI F ++++ YMHDTP   LFN   R
Sbjct: 531 KVSSANVNWYAVASRQQSINVRQYPGAKNALGVVKILFPNKHHIYMHDTPAKSLFNKDTR 590

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             + GCVR+ +   +   +L      S+ ++ + +   K    ++  ++PV+  Y +AW 
Sbjct: 591 AYSHGCVRLHDPKAMAAAVL----GKSKDYVSQQIAKGKNRQERVEGDLPVYVSYFTAWP 646

Query: 398 PKDSIIQFRDDIYGLDNVHVGIIPLPED 425
                +++  D+Y  D   +  +   +D
Sbjct: 647 NDAGQVEYFADVYDRDRHLLKALKKTDD 674


>gi|218530929|ref|YP_002421745.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218523232|gb|ACK83817.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 648

 Score =  345 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 104/421 (24%), Positives = 173/421 (41%), Gaps = 41/421 (9%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
               +           ++ S +  +I  +      D     LA    G    +   +   
Sbjct: 191 LSAALALYARDARSGRVNPSAISRLITPTLDLPPADTVLTRLAASGAGAGDVLQSYNPRQ 250

Query: 75  --IAQTEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERLIIS----GDLDP 126
                 +K +A  +   ++G    +LP  P L LG S   V  LR R  +     G LD 
Sbjct: 251 PGYLALKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLDASAAGTLDS 310

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ----LQVNLMR 182
           + G + A+D  V  AVK FQ   GL  +G +  +T+ A+      +       + VN+ R
Sbjct: 311 APGEADAYDRAVADAVKNFQRSRGLPANGTLTRATVAALASSSVPKTSASEADILVNMER 370

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            + L   ++G  YV VN+P   L+   +G+V   + VIVG+    TP     +   + NP
Sbjct: 371 WRWLPP-ELGPNYVFVNVPEFKLKVFRDGQVRDETRVIVGKPTSPTPTFSGMMEYAVVNP 429

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI+ K M+A  R            ++   G                N   RQ P
Sbjct: 430 SWYVPPSIL-KQMLASGR-------TAGFEVVRRGG----------------NISLRQPP 465

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G+ NA+   K  F +++  Y+HDTP   LF+   R  + GCVRV +       +L   P+
Sbjct: 466 GERNALGFIKFMFPNQHAVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PS 522

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           W++  +++++   + T ++L  ++PVH  Y +A        +   D+YG D      + L
Sbjct: 523 WTQERLKKLIGKGERT-LRLPEKLPVHLAYFTAEVDDLGSYRTLPDLYGYDGPMKVALGL 581

Query: 423 P 423
            
Sbjct: 582 A 582


>gi|254561917|ref|YP_003069012.1| hypothetical protein METDI3518 [Methylobacterium extorquens DM4]
 gi|254269195|emb|CAX25161.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 646

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 103/421 (24%), Positives = 173/421 (41%), Gaps = 41/421 (9%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
               +           ++ + +  +I  +      D     LA    G    +   +   
Sbjct: 189 LSAALALYARDARGGRVNPAAISRLITPTLDLPPADTVLTRLAASGSGAGDVLQSYNPRQ 248

Query: 75  --IAQTEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERLIIS----GDLDP 126
                 +K +A  +   ++G    +LP  P L LG S   V  LR R  +     G LD 
Sbjct: 249 PGYLALKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLDASAAGTLDS 308

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ----LQVNLMR 182
           + G + A+D  V  AVK FQ   GL  +G +  +T+ A+      +       + VN+ R
Sbjct: 309 APGEADAYDRAVADAVKNFQRSRGLPANGTLTRATVAALASSSVPKTSASEADILVNMER 368

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            + L   ++G  YV VN+P   L+   +G+V   + VIVG+    TP     +   + NP
Sbjct: 369 WRWLPP-ELGPNYVFVNVPEFKLKVFRDGQVRDETRVIVGKPTSPTPTFSGMMEYAVVNP 427

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI+ K M+A  R            ++   G                N   RQ P
Sbjct: 428 SWYVPPSIL-KQMLASGR-------TAGFEVVRRGG----------------NISLRQPP 463

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G+ NA+   K  F +++  Y+HDTP   LF+   R  + GCVRV +       +L   P+
Sbjct: 464 GERNALGFIKFMFPNQHAVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PS 520

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           W++  +++++   + T ++L  ++PVH  Y +A        +   D+YG D      + L
Sbjct: 521 WTQERLKKLIGKGERT-LRLPEKLPVHLAYFTAEVDDLGSYRTLPDLYGYDGPMKVALGL 579

Query: 423 P 423
            
Sbjct: 580 A 580


>gi|260459428|ref|ZP_05807683.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034982|gb|EEW36238.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 628

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 90/382 (23%), Positives = 167/382 (43%), Gaps = 26/382 (6%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP---LHLGNSSVSVQR 113
             V   ++S  P             +   Q         E+ + P   L  G++S  + +
Sbjct: 252 QEVRTYLESRHP--QNPEYQALRVELESLQASAEN----EIVVDPKLLLKPGDTSPELPK 305

Query: 114 L----RERL-----IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           L       L        G++      S  +   +   +K  Q + G+   G++   T+  
Sbjct: 306 LLTLIARNLDDEMGGAYGEMLSRLATSEVYVPELIPLIKAVQQKEGMKGDGVIGPRTVAL 365

Query: 165 M-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           +       R+ ++QV L  ++  L   +G   V +N PA +   +++G+  L++  ++GR
Sbjct: 366 LAGTSKADRLLKVQVALEELR-WLPSDLGSPRVFINQPAFTASYIDDGQEKLKTRAVIGR 424

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
              QT   + +I ++ F+PYW +P+SII  +M+  LR DP YL      + D +GK +  
Sbjct: 425 TTNQTAFFYDQIKQVDFHPYWGVPQSIIVNEMLPRLRNDPGYLDRAGYEVTDSRGKRIPS 484

Query: 284 EEVDWNSPEPP-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
             V+W        +  RQ P + NA+   KI F +++  YMHDTP+   F   +R  + G
Sbjct: 485 SAVNWGGYGANIPYSVRQQPSEANALGELKILFPNKHAIYMHDTPQKSFFKQDMRALSHG 544

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           CVR+++   +   +L      S  +I E +K   +T   +  ++PV+  Y +AW      
Sbjct: 545 CVRLQDPRGMAAAVLDT----SVDYIAEKLKHGHSTQ-DVTRKIPVYVAYFTAWPDMSGK 599

Query: 403 IQFRDDIYGLDNVHVGIIPLPE 424
           +++  D+Y  D+     +   E
Sbjct: 600 VEYFGDVYDRDSRLKQAMDATE 621


>gi|326336070|ref|ZP_08202242.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325691579|gb|EGD33546.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 559

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 159/374 (42%), Gaps = 17/374 (4%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG--WPELPIRPLH---LGNSSVSVQ 112
            + + ID+  P  S       +     Y+++       +P   I  L    +G +  ++ 
Sbjct: 188 NLSLIIDALQPQQS-----FYKAMAQKYRELEKDTAITYPLFSITDLKSYGIGYADSTIL 242

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            LR  L   G   P +G     D+ +  AVK FQ   G+   G+  + T+  + + +  +
Sbjct: 243 ALRAHLEYKGYKSPVQGEPQQVDSLLIEAVKEFQRSIGIPADGIPGALTMNYLQMNIKQK 302

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
              L +N+ R++    + +G  Y+LVNIP   L       +   + V+VG     TPI  
Sbjct: 303 RDLLLLNMERLR-WQNKDLGEDYILVNIPEYCLRLFHKDSLMFETRVVVGNPKTPTPIFS 361

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL--KDNNIHMIDEKGKEVFVEEVDW-- 288
             +  I F P W +P+SI++K+M+  +      L        +  E  KE+   +V+W  
Sbjct: 362 DSLRYIEFRPTWSVPQSIVRKEMIPNIISSGDSLKYAKRGYKLY-ENNKEIDPTQVNWKD 420

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +      F F +DP + N++   K   Y+  + Y+HDTP   LF N  R  + GC+RV  
Sbjct: 421 DQLHKRIFYFVEDPSERNSLGLVKFVLYNDMSIYLHDTPSKRLFGNTQRTYSHGCIRVEY 480

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP-VKLATEVPVHFVYISAWSPKDSIIQFRD 407
                 +LLK +  W    + E + T K    V       +   Y++AW  K   +  R+
Sbjct: 481 PDQFATYLLKSSEDWDEQKVREAMDTGKNQYRVHPKKHFVIDISYLTAWVDKKGNLIIRN 540

Query: 408 DIYGLDNVHVGIIP 421
           D Y  D   + ++ 
Sbjct: 541 DPYQFDKEQLKVLN 554


>gi|13470744|ref|NP_102313.1| hypothetical protein mll0533 [Mesorhizobium loti MAFF303099]
 gi|14021487|dbj|BAB48099.1| mll0533 [Mesorhizobium loti MAFF303099]
          Length = 626

 Score =  344 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 88/334 (26%), Positives = 159/334 (47%), Gaps = 17/334 (5%)

Query: 102 LHLGNSSVSVQRL----RERL-----IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           L  G +S  + +L       L        G+L      S  +   +   +K  Q++ G+ 
Sbjct: 292 LKPGETSPELPKLLSLIARNLDDNMGGTYGELLSRLASSEVYVPELVPLIKAVQVKEGMK 351

Query: 153 PSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
             G++   T+  +       R+ ++QV L  ++  L   +G   V +N PA +   ++NG
Sbjct: 352 GDGVIGPRTVALLAGTSKADRLLKVQVALEELR-WLPSDLGSPRVFINQPAFTASYIDNG 410

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +  L++ V+VGRV  QT   + +I ++ F+PYW +P+SII  +M+  LR DP YL     
Sbjct: 411 EEKLKTRVVVGRVTNQTAFFYDQIKQVDFHPYWGVPQSIIVNEMLPRLRSDPGYLDRAGY 470

Query: 272 HMIDEKGKEVFVEEVDWNSPEPP-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
            + D +GK +    V+W +      +  RQ P + NA+   KI F +++  YMHDTP+  
Sbjct: 471 EVTDSRGKRIPSSAVNWGAYGANIPYSVRQQPSEANALGELKILFPNKHAIYMHDTPQKS 530

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
            F   +R  + GCVR+++   +   +L      S  ++ E +K   +T   +  ++PV+ 
Sbjct: 531 FFKQDMRALSHGCVRLQDPRGMAAAVLGT----SVDYVAEKLKHGHSTE-DVTRKIPVYV 585

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
            Y +AW      +++  D+Y  D+     +   E
Sbjct: 586 AYFTAWPDMSGKVEYFSDVYDRDSRLKQALDATE 619


>gi|188582120|ref|YP_001925565.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179345618|gb|ACB81030.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 662

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 105/427 (24%), Positives = 175/427 (40%), Gaps = 42/427 (9%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
               +           ++ + + +++  +      D     L     G    + I +   
Sbjct: 206 LSASLALYARDARGGRVNPAAISKLLTPTLDLPSADAVLTRLVAAGAGAGDALQIYNPRQ 265

Query: 75  --IAQTEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERLIIS----GDLDP 126
                 +K +A  +   ++G    +LP  P L LG S   V  LR R  +     G LD 
Sbjct: 266 PGYLALKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLEKQAAGTLDA 325

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ----LQVNLMR 182
           + G + A+D  V  AVK FQ   GL  SG +  +T+ A+  P   +       L VN+ R
Sbjct: 326 APGEADAYDGAVADAVKSFQRSRGLPASGTLTRATVAALANPSVPKTAASEADLLVNMER 385

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            +  L  ++G  YV VN+P   L+   +G +   + VIVG+    TPI    +   + NP
Sbjct: 386 WR-WLPAELGPDYVFVNVPEFKLKVFRDGHLRDETRVIVGKPTSPTPIFSGMMEYAVVNP 444

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI+ K M+A  R            ++                        RQ P
Sbjct: 445 SWYVPPSIL-KQMLASGR-------TAGFEVVRRG----------------KTISLRQPP 480

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G+ NA+   K  F ++++ Y+HDTP   LF+   R  + GCVRV +       +L   PT
Sbjct: 481 GERNALGFIKFMFPNQHSVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PT 537

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           W+   +++++   + T ++L  ++PVH  Y +A        +   D+YG D      + L
Sbjct: 538 WTEERLKKLIGKGERT-LRLPEKLPVHLAYFTAEVDDLGSYRTLTDLYGYDGPMKAALGL 596

Query: 423 -PEDHPI 428
            P    +
Sbjct: 597 APRSEAV 603


>gi|118589141|ref|ZP_01546548.1| hypothetical protein SIAM614_13853 [Stappia aggregata IAM 12614]
 gi|118438470|gb|EAV45104.1| hypothetical protein SIAM614_13853 [Stappia aggregata IAM 12614]
          Length = 656

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 86/335 (25%), Positives = 156/335 (46%), Gaps = 17/335 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISG--DLDPSKGLSVA-------FDAYVESAVKLFQMRHGLD 152
           L  G SS  ++ +   +  +G  +L  +   ++        +   +   VK FQ    L 
Sbjct: 318 LKAGKSSPEMKNIVAAINKNGSEELKTAHAETLTAYDGAELYSPELVELVKAFQKEAKLT 377

Query: 153 PSGMVDSSTLEAMNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           P G++  +T+ AM       +I ++++ + R +  L +++G R V +N  A +      G
Sbjct: 378 PDGIIGKNTINAMVGETNAAKIAKVELAMERSR-WLPEQLGERKVFINQAAFTATYTAPG 436

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +  L   V+VG+   QT   + +I  + +NPYW +P SII  +M+  L +DP YL     
Sbjct: 437 EDPLSMRVVVGKKSNQTNFFYDKIQIVEYNPYWGVPYSIIVNEMLPKLAKDPSYLDRAGY 496

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            +    G+++    VDW +          RQ PG  NA+   KI F ++++ YMHDTP  
Sbjct: 497 EVTTPGGRQISSSAVDWYAVASKQQSVNVRQYPGSSNALGEVKILFPNKHHIYMHDTPAK 556

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF   +R  + GC+R+++   +   +L      S+ ++   +   +    ++  ++PV+
Sbjct: 557 SLFKKDMRAYSHGCIRLQDPKAMAAAVL----GKSKDYVSSRISGGQNEQERVTGDIPVY 612

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
             Y +AW  +D  I F  D+Y  D   +  I   E
Sbjct: 613 VSYFTAWPEQDGTIGFYTDVYDRDMHLLEAIEKTE 647


>gi|163852171|ref|YP_001640214.1| peptidoglycan binding domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163663776|gb|ABY31143.1| Peptidoglycan-binding domain 1 protein [Methylobacterium extorquens
           PA1]
          Length = 646

 Score =  343 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 105/421 (24%), Positives = 173/421 (41%), Gaps = 41/421 (9%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
               +           ++ + +  +I  +      D     LA         +   +   
Sbjct: 189 LSAALALYARDARGGRVNPAAISRLITPTLDLPPADTVLTRLAASGAAAGDVLQGYNPRQ 248

Query: 75  --IAQTEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERLIIS----GDLDP 126
                 +K +A  +   ++G    +LP  P L LG S   V  LR R  +     G LD 
Sbjct: 249 PGYLALKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLDASAAGTLDS 308

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPV---DLRIRQLQVNLMR 182
           + G + A+D  V  AVK FQ   GL  +G +  +T+ A+ N  V         + VN+ R
Sbjct: 309 APGEADAYDRSVADAVKNFQRSRGLPANGTLTRATVAALVNSSVPKTSASEADILVNMER 368

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            + L   ++G  YV VN+P   L+   +G+V   + VIVG+    TP     +   + NP
Sbjct: 369 WRWLPP-ELGPNYVFVNVPEFKLKVFRDGQVRDETRVIVGKPTSPTPTFSGMMEYAVVNP 427

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI+ K M+A  R            ++   G                N   RQ P
Sbjct: 428 SWYVPPSIL-KQMLASGR-------TAGFEVVRRGG----------------NISLRQPP 463

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G+ NA+   K  F +++  Y+HDTP   LF+   R  + GCVRV +       +L   PT
Sbjct: 464 GERNALGFIKFMFPNQHAVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PT 520

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           W++  +++++   + T ++L  ++PVH  Y +A        +   D+YG D      + L
Sbjct: 521 WTQERLKKLIGKGERT-LRLPEKLPVHLAYFTAEVDDLGSYRTLPDLYGYDGPMKVALGL 579

Query: 423 P 423
            
Sbjct: 580 A 580


>gi|110637822|ref|YP_678029.1| hypothetical protein CHU_1418 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280503|gb|ABG58689.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 558

 Score =  342 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 92/375 (24%), Positives = 179/375 (47%), Gaps = 10/375 (2%)

Query: 53  DNFLARVDMGIDSDIPII---SKETIAQTEKAIAFYQDILSRGGW-PELPI--RPLHLGN 106
           D+ L R   G    +P I     +      + +     + S+  +  +LP   R L LG+
Sbjct: 181 DSMLVRYFTGNLDSLPAILRPHYDIYESLRRTLRLVDSLGSQAIYNQKLPYLDRTLTLGD 240

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +   +  ++ RL  + + +    L+  FD  ++ ++++FQ   GL  SG +D  T++ +N
Sbjct: 241 TCYIISSVKRRLQSTSEYNF-DSLNNTFDEQLQESIRIFQTHVGLHASGKIDKKTIDKLN 299

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
                    + VN+ R +  L   +   ++LVNI   +L    +  V    +VIVGR   
Sbjct: 300 FTAAEVRGAILVNMERFR-WLPNDLPKEFILVNIADYTLRHFIDKNVVYTESVIVGREYT 358

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
            TP+  + +  I FNPYW +PRSI  K+++  L+++P YL+ +N+ +     +       
Sbjct: 359 STPVFEAMMTYIEFNPYWTVPRSIAVKEILPSLKRNPNYLQSHNMDLFRGNAQVAIPSSF 418

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +     F  +++PG  N++   K+ F +  + Y+HDTP   LF    R  + GC+R+
Sbjct: 419 SNYTAGNFPFTIKENPGPKNSLGQVKLMFPNPYSIYLHDTPGKYLFEQEERSFSHGCIRL 478

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI-IQF 405
           ++ +   + +L      ++  I+++++ +K   + L  ++PV   Y + +S +  I + F
Sbjct: 479 KDPLKFALHILSKQ-GVTQADIDKIIRNKKNYVIPLKEKIPVMLTYFTCYSKRGDIHLYF 537

Query: 406 RDDIYGLDNVHVGII 420
             DIYG D   +  +
Sbjct: 538 FKDIYGKDKKILEAL 552


>gi|300024143|ref|YP_003756754.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525964|gb|ADJ24433.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 654

 Score =  342 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 163/377 (43%), Gaps = 15/377 (3%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
           D      D G          +      + +   +     G    +P    +  G  S  +
Sbjct: 217 DTLATATDKGAYLKSLQPKHKQFELLRQKLLALRS-GGNGETINIPGGANIAPGKRSPQI 275

Query: 112 QRLRERLIISGDLDPSKG------LSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEA 164
             +R+ L ++    P  G          +D  +  AVK +++  G+  P+  + ++   +
Sbjct: 276 ALIRKALKVT---PPQAGPDGKPFDETFYDDDLARAVKAYKVEKGIDPPTPTITTALRRS 332

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +N    +   +L  N+   +  +   +G  YV VNIP   +  V++G+V     ++ G V
Sbjct: 333 LNGDDGISEAKLLANMEEWR-WMPDDLGDFYVTVNIPDFKVRVVKDGEVVFDERIVTGSV 391

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           +RQTP+    +  I+F P W +P SI  K+++  LR     L+   + +++  G+ +   
Sbjct: 392 NRQTPVFSDMMRTIVFQPRWNVPDSIKVKELLPGLRAGGDPLRRQGL-VMERNGRRISAT 450

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            ++W   +  NF   Q P   NA+   K  F + +  Y+HDTP   LFN  +R  + GC+
Sbjct: 451 SINWYRSDIRNFHVYQPPSGGNALGVVKFLFPNAHAVYLHDTPSKGLFNESIRAFSHGCM 510

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR-KTTPVKLATEVPVHFVYISAWSPKDSII 403
           RVRN + L   +L     W +  + +++K   +   + L   +PVH  Y +A +  D  I
Sbjct: 511 RVRNPVQLAEVVLAQDKGWDKIAVNDLLKNGPEENEIALDRPIPVHITYFTARAGDDGAI 570

Query: 404 QFRDDIYGLDNVHVGII 420
           +   DIYG +      +
Sbjct: 571 ESFGDIYGHEKRITLAL 587


>gi|302382528|ref|YP_003818351.1| ErfK/YbiS/YcfS/YnhG family protein [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302193156|gb|ADL00728.1| ErfK/YbiS/YcfS/YnhG family protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 521

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 90/359 (25%), Positives = 157/359 (43%), Gaps = 31/359 (8%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGL--- 130
            +        Y+ I+  GGWP       +  G+S   V  +  RL+  GD+  + G    
Sbjct: 173 YSNLSAGYVRYRRIIRNGGWPRFRAGASIEPGSSDTRVPIIITRLVAEGDMSEADGARLT 232

Query: 131 --SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              + +   +E+AV+ FQ RHGL P G + + T  ++    + R RQ+ +NL R ++ L+
Sbjct: 233 AQGLVYGPELETAVRSFQARHGLAPDGRIGAGTQSSLGASAEDRARQIALNLER-RRWLK 291

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           +++    + VN  AA +   ++G+    + V+ G    QTP L      ++ NP W +P 
Sbjct: 292 RELSPERIEVNTAAAIMVYWKDGRPVHSNRVVCGAPATQTPSLEKPFASVVANPPWYVPA 351

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I +++++    + P YL   N+++ +                        Q  G   A+
Sbjct: 352 GIARREILP---RGPAYLASQNMYVQNG--------------------TVIQRAGPTAAL 388

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K E       ++HDTP    FN   R  + GCVRV+N ++    LL   PT      
Sbjct: 389 GYVKFELRDSYAIFLHDTPSKAAFNLSTRQRSHGCVRVQNAVEFARILLSPDPTL-LSQF 447

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
           +   +TR+T  ++   E+ V  +Y +A+      + FR+DIY  D V    + +    P
Sbjct: 448 DTAQQTRETKRIQTGREISVRLLYWTAFVDGQGRVAFREDIYRRDQVLAEALGIAVSLP 506


>gi|308049138|ref|YP_003912704.1| peptidoglycan-binding domain 1 protein [Ferrimonas balearica DSM
           9799]
 gi|307631328|gb|ADN75630.1| Peptidoglycan-binding domain 1 protein [Ferrimonas balearica DSM
           9799]
          Length = 492

 Score =  342 bits (877), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 96/336 (28%), Positives = 160/336 (47%), Gaps = 11/336 (3%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           L+ G W       +  G     V  +R +L   GD  P +  S+ +D  + +AV+ FQ R
Sbjct: 156 LAIGAW-----GVIKPGEHHAEVAPIRRQLARLGDY-PGRTDSLRYDGGMVAAVQQFQRR 209

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   T   + +    R R L   L+R +          ++LVNIP   L+ V
Sbjct: 210 HGLKADGVIGPRTRHWLRLDYQERARLLARALVR-QAHDRHYFAPDHLLVNIPDYRLDWV 268

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           ++G+    + V+VG   R+TP +HS +  ++ NPYW +P SI++KD++  +  D  Y++ 
Sbjct: 269 QDGQSRFSARVVVGMPSRRTPRMHSELRSVVVNPYWNVPNSIMRKDLLPRILTDGSYVQR 328

Query: 269 NNIHMIDEKGKEVF--VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
           N   ++D + + ++   +E+   + +   +  RQ PG  N++   K    +    Y+HDT
Sbjct: 329 NRFEVLDSENRPLWLSPDELSRLAYQGFPYRLRQRPGPGNSLGRYKFHLINSQAIYLHDT 388

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P+  LF    R  +SGC+RV N   L   LL+         ++  +       + L   +
Sbjct: 389 PKQRLFERSTRAFSSGCIRVENADLLADLLLQAQSPEGPP-LKRYLNASGPRWLTLQQPL 447

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            V+ VY SAW       QFR DIY L+   +G  P 
Sbjct: 448 AVYLVYWSAWMD-GGRAQFRSDIYELEKAAIGRQPA 482


>gi|306843862|ref|ZP_07476457.1| cell wall degradation protein [Brucella sp. BO1]
 gi|306275617|gb|EFM57341.1| cell wall degradation protein [Brucella sp. BO1]
          Length = 681

 Score =  341 bits (876), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 98/409 (23%), Positives = 171/409 (41%), Gaps = 25/409 (6%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 246 SARALRYAIDAGEGRIIADRLSGFHDLPRMRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 304

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 305 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 362

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 363 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 422

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++  L    G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP
Sbjct: 423 LR-WLPHDFGKRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNP 481

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQ 300
            W +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ
Sbjct: 482 SWGVPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQ 540

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +
Sbjct: 541 KPSLDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTS 600

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
                 +       +    +K+   VPV+  Y +AW   D  I +  DI
Sbjct: 601 VKNLDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDI 644


>gi|240139503|ref|YP_002963978.1| hypothetical protein MexAM1_META1p2949 [Methylobacterium extorquens
           AM1]
 gi|240009475|gb|ACS40701.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 648

 Score =  341 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 102/421 (24%), Positives = 173/421 (41%), Gaps = 41/421 (9%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
               +           ++ + +  +I  +      D     LA    G    +   +   
Sbjct: 191 LSAALALYARDARGGRVNPAAISRLITPTLDLPPADTVLTRLAASGAGAGDVLQSYNPRQ 250

Query: 75  --IAQTEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERLIIS----GDLDP 126
                 +K +A  +   ++G    +LP  P L LG S   V  LR R  +     G LD 
Sbjct: 251 PGYLALKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLDASAAGTLDS 310

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ----LQVNLMR 182
           + G + A+D  V  AVK FQ   GL  +G +  +T+ A+      +       + VN+ R
Sbjct: 311 APGEADAYDRAVADAVKNFQRSRGLPANGTLTRATVAALASSSVPKTSASEADILVNMER 370

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            + L   ++G  YV VN+P   L+   +G++   + VIVG+    TP     +   + NP
Sbjct: 371 WRWLPP-ELGPNYVFVNVPEFKLKVFRDGQMRDETRVIVGKPTSPTPTFSGMMEYAVVNP 429

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI+ K M+A  R            ++   G                N   RQ P
Sbjct: 430 SWYVPPSIL-KQMLASGR-------TAGFEVVRRGG----------------NISLRQPP 465

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G+ NA+   K  F +++  Y+HDTP   LF+   R  + GCVRV +       +L   P+
Sbjct: 466 GERNALGFIKFMFPNQHAVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PS 522

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           W++  +++++   + T ++L  ++PVH  Y +A        +   D+YG D      + L
Sbjct: 523 WTQERLKKLIGKGERT-LRLPEKLPVHLAYFTAEVDDLGSYRTLSDLYGYDGPMKVALGL 581

Query: 423 P 423
            
Sbjct: 582 A 582


>gi|254418463|ref|ZP_05032187.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
 gi|196184640|gb|EDX79616.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
          Length = 497

 Score =  341 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 98/435 (22%), Positives = 177/435 (40%), Gaps = 50/435 (11%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
                L  P GL+L E  +  +VL  +     H  V+      L  +        P+++ 
Sbjct: 71  ADRHGLSAPDGLALSEAELTQAVL-TLAEALAHGRVDPASVETLWEMGRNQVDTPPLLAT 129

Query: 73  E----TIAQTEKAIA--------------FYQDILSRGGWPELPIR-PLHLGNSSVSVQR 113
                T+A+T   +A               Y+ I  RGGWP   +   +    S   +  
Sbjct: 130 AVDDGTLAETMAGLAPQDRGYQGLCDGFLRYRAIADRGGWPPFALGATIEPFASDPRLPA 189

Query: 114 LRERLIISGDLDPSKGL-----SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L  RL + GDL  +           + + ++ AV++FQ+RHGL+    +  +T  A+++ 
Sbjct: 190 LLPRLRVEGDLTDAAAAMVGPSGGDYGSVLQEAVRVFQVRHGLEADARIGPATQRALSIS 249

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            + R RQ+ +NL R ++ L++ +    + VN  A+ +   ++G+      V+ G  D  T
Sbjct: 250 AEARARQIALNLER-RRWLKRDVAPERIEVNTAASIMVYWKDGRPVHSMRVVTGDADNAT 308

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P L      ++ NP W +P SI Q++++    +   Y++ NN+ + +             
Sbjct: 309 PSLERPFASVVANPPWTVPTSIAQREILP---RGAGYMRANNMTIQNG------------ 353

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                   +  Q  G   A+   K E       ++HDTP    F+   R  + GCVRV++
Sbjct: 354 --------MVVQRAGPNAALGQVKFELQDSYAIFLHDTPSRGAFDQSFRHLSHGCVRVQD 405

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
            +     LL   P       +  + + +T  V     + V  +Y +A+      + FRDD
Sbjct: 406 AVGFARLLLAPDPE-RLARFDAALDSGQTVRVATGRPIDVRLLYWTAFLDGQGRVAFRDD 464

Query: 409 IYGLDNVHVGIIPLP 423
           IY  D      + + 
Sbjct: 465 IYRRDTRLAEALGIA 479


>gi|220920262|ref|YP_002495563.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219944868|gb|ACL55260.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 670

 Score =  341 bits (875), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 93/343 (27%), Positives = 150/343 (43%), Gaps = 32/343 (9%)

Query: 92  GGWPEL--PIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           GG P +  P  P L  G     V  +R R  +          + A+DA V  AV+ FQ  
Sbjct: 257 GGVPMVRLPKGPTLKPGMRDARVPLIRARFGL-----GPADDATAYDAAVAGAVERFQRE 311

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
            GL  +G+++  T+ A+  P   R    L  N+ R +  L   +G  +V VNIP   +  
Sbjct: 312 RGLAATGILNPETVAALAGPSPGRQEADLLANMERWR-WLPADLGKTHVWVNIPEYKVRV 370

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           V   +V   + VIVG+ D  TP+    +   + NP W +P SI++ + +  L +DP Y  
Sbjct: 371 VSGTRVVDEARVIVGKPDSPTPVFSGEMTYAVVNPSWNVPPSILKNEFLPRLARDPTYAA 430

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
                ++                        RQ PG+ NA+   K  F + +  Y+HDTP
Sbjct: 431 RLGYEVVRRGNGIA----------------IRQPPGERNALGFIKFMFPNDHAVYLHDTP 474

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
              LF    R  + GCVRV +       +L   PTW    ++ ++   + T V L  ++P
Sbjct: 475 NRALFARSARALSHGCVRVDDPFRFAEVVLG--PTWPTERLKRLIGKGERT-VMLPEKLP 531

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLD---NVHVGIIPLPEDHP 427
           VH  Y +  + +   ++  DD+YG++    + +G+   P   P
Sbjct: 532 VHLAYFTLVADEAGTLRQFDDLYGINARVKMALGLSNEPLPAP 574


>gi|327405461|ref|YP_004346299.1| ErfK/YbiS/YcfS/YnhG family protein [Fluviicola taffensis DSM 16823]
 gi|327320969|gb|AEA45461.1| ErfK/YbiS/YcfS/YnhG family protein [Fluviicola taffensis DSM 16823]
          Length = 535

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 11/324 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +S   V+  +E LI  G LDP K      D     A+  FQ  +GL   G++   T +++
Sbjct: 217 DSLRCVELSKESLIDKGYLDPKKND----DESFWDAMSRFQADNGLKADGVIGIYTRKSL 272

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           N  V  +  +  +++ R +         RY+ VNIP   L    N  +     V+VG+ +
Sbjct: 273 NESVRFKCHRAILSMERWRWRAP--FPDRYLWVNIPEYKLRLFYNDSLLSEHRVVVGKPE 330

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
            QTP L S++  I+  PYW  P +I  K+ +  ++ +  Y   NN  +   +  EV    
Sbjct: 331 NQTPELSSKLRAIISLPYWTQPHTIASKEFLPAIQNNSNYAAKNNYKVYRGE-TEVDPTT 389

Query: 286 VDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
           ++W   +  NF F  RQ+PG  NA+   K EF ++   Y+HDTP    FN  +R  + GC
Sbjct: 390 INWKRYKEKNFPFRVRQEPGSDNALGLVKFEFNNKFGVYIHDTPSKGFFNKDIRAYSHGC 449

Query: 344 VRVRNIIDLDVWLL--KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           +R      L  ++L   D    +R  ++ ++  ++   + L   + +   YI+  +    
Sbjct: 450 MRCELPDSLARFILTRDDRQKMTRDSLDTLIARKEHFTIHLHKPIQLQVDYITVTTNGKG 509

Query: 402 IIQFRDDIYGLDNVHVGIIPLPED 425
            + F  D+Y  D  ++ ++ + + 
Sbjct: 510 RLLFYPDVYDRDEKYLKMMKVYQK 533


>gi|332878616|ref|ZP_08446336.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332683517|gb|EGJ56394.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 568

 Score =  338 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 90/328 (27%), Positives = 157/328 (47%), Gaps = 11/328 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G ++  +++LR+ L   G    ++      D+ +   V+ FQ   GL P G++   TL 
Sbjct: 240 YGYTAPVIEKLRKGLKQKGFEAIAEADPQTVDSTLIRTVQRFQESKGLTPDGVLGKQTLY 299

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            +N+        L++N+ R++      +G  Y +VNIP   L   E   V   + V+VG+
Sbjct: 300 FINMNDTRTRDLLKLNMERMRVF-NNYLGDHYAIVNIPDFKLLLFEKDSVLFETRVVVGK 358

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHMIDEKGKEV 281
               TPI    I  + F P W +P+SII+K+M+  +  + +P+  K+    M  E GK+V
Sbjct: 359 SATSTPIFTDTIQYVEFRPTWSVPQSIIKKEMIPQIVSQANPEKYKNRGYTMY-ENGKKV 417

Query: 282 FVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
              +V+WN  +     F F + P   N++   K    +  + Y+HDTP    F+   R  
Sbjct: 418 DPTQVNWNDPAVHKRGFYFVEAPSANNSLGLVKFILTNGMSIYLHDTPSKHFFDRDYRAL 477

Query: 340 TSGCVRVRNIIDLDVWLLKD---TPTWSRYHIEEVVKTRKTT--PVKLATEVPVHFVYIS 394
           + GC+RV+N  +L   LLK+      W+   + E ++  K +   + L T+  V+ +Y +
Sbjct: 478 SHGCIRVQNPSELAYHLLKNEESQTPWTIEKVTEAMQNTKRSQYRIALKTKYKVNIIYYT 537

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           AW   +  +  ++DIY LD   +  I  
Sbjct: 538 AWVDNNGEVVIKNDIYELDTPQLNEIKR 565


>gi|150026170|ref|YP_001296996.1| hypothetical protein FP2133 [Flavobacterium psychrophilum JIP02/86]
 gi|149772711|emb|CAL44194.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 566

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 101/385 (26%), Positives = 182/385 (47%), Gaps = 53/385 (13%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGN------SSVSVQRLRERLIISGDLDPSK 128
               ++A+     +L+      +P   L   +      S+ +V+ ++ RL+   D+  + 
Sbjct: 182 YKNLKQAL----QVLNAFPKDSVPFVILKPKDKIALNKSNKAVKIIKSRLMYWHDMKQAN 237

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
            ++  +D   + AVK FQ RHGL P G++   T+ A+N   + RI Q+  NL R +    
Sbjct: 238 TITNIYDKETQDAVKTFQSRHGLTPDGLIGKGTILALNFTKNQRIEQVISNLERWR-WFA 296

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
              G  Y+L+NIP  SL A++N     +  ++VG+  RQTPIL S+++ I  NP W +P 
Sbjct: 297 SDFGQNYLLINIPDYSLLAIKNNDTMQKQRIVVGKDTRQTPILESKVSNINLNPNWTVPP 356

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I+++D+     +D    K   + ++D K KE+      W   +   + + Q+PGK +++
Sbjct: 357 TILKEDIYPDAIKDKGAFKKKGLVILDHKNKEINPWS--WTIEDAKKYKYVQNPGKNSSL 414

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              KI F ++ + Y+HDT     F    R  +SGCVR+   +++  +L+ +   W+   I
Sbjct: 415 GLMKINFPNKYSVYLHDTNHRDFFGLNYRSLSSGCVRLEKPLEMAEYLINNPEKWNLKTI 474

Query: 369 EEVVKTR---------------------------------------KTTPVKLATEVPVH 389
           ++                                            KT  V++A ++ +H
Sbjct: 475 QDTTDINHYNKLQKEKEKKIAIKNAKLLAKNPLLVIPEKTYPKQELKTIVVRIADDIFIH 534

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDN 414
            +Y +AW  K+  +QFR+DIY LD+
Sbjct: 535 QLYWTAWLQKE-TLQFREDIYCLDS 558


>gi|319957846|ref|YP_004169109.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
           16511]
 gi|319420250|gb|ADV47360.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
           16511]
          Length = 575

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 106/408 (25%), Positives = 184/408 (45%), Gaps = 24/408 (5%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIA--- 83
           V+ P+    L  +        V   +D    ++    +    +  KE      K +    
Sbjct: 139 VDWPLVQQKLKRL---KETQDVQAAWDIRPKKLPETKELYQVLNQKELAPYLRKQLPLEP 195

Query: 84  FYQDILS-------RGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
            Y+ +L+          +P+L   R L + ++   + +++  L   GD          FD
Sbjct: 196 RYRKLLALLAKYRTMPNFPKLSYGRTLRINSTDSRIPQIKRMLKFFGDYPKHFAEDNQFD 255

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
                A++ F+ R  L P   VD+  ++A+N      +R++ VNL ++K L   +    Y
Sbjct: 256 RPFAQAIRSFRSRFKLPPGNTVDNKVIQALNTTKKEYLRKILVNLEKLK-LYPHRWEPDY 314

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           V VN+P   +    NG+    S V+VGR+DR TPI  S++  ++ NP W IP +++++D+
Sbjct: 315 VEVNVPEFKMRFYRNGQPIFSSDVVVGRIDRPTPIFDSKMTYMVLNPTWTIPDNLVRRDL 374

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP-------EPPNFIFRQDPGKINAM 308
           + +L+++P YL+ +NIH+           E+D+           P  + F Q P   NA+
Sbjct: 375 IPMLKKEPDYLQKHNIHVYTSYKPNAPEVELDFEKLFSYEHDTRPIPYRFVQFPSDQNAL 434

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT-WSRYH 367
              K  F ++ + Y+HDT    LF    R  +SGC+RV    D    LL      +S   
Sbjct: 435 GRVKFMFPNKYSVYLHDTDNKKLFGYRYRVFSSGCMRVAKPFDFMDLLLHYARGNYSEGK 494

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           I+E++ + K T ++L   +PVH VY +    +     F  DIY  D +
Sbjct: 495 IQEILASNKPTTIRLKKAIPVHIVYFTV-RREGKKDYFFYDIYLYDKM 541


>gi|34558804|gb|AAQ75149.1| conserved hypothetical protein [Alvinella pompejana epibiont 6C6]
          Length = 559

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 102/380 (26%), Positives = 184/380 (48%), Gaps = 18/380 (4%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI----RPLHLG 105
            R  N LA+ D+    +      +  +    A+  Y+ I ++   P +P       L  G
Sbjct: 157 KRLFNALAKNDIVSLFNSLTPLPKRHSDLIDALEIYRAIPTK--LPRIPYTRNFSGLKFG 214

Query: 106 NSSVSVQRLRERLIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +    + +++ERL + GD     G   S  FD  ++SA+  ++ R  L+ +G++D  T+ 
Sbjct: 215 DVDRKIAKIKERLAMEGDYPKESGAIYSDIFDEKLKSAIYRYKERFNLEQNGIIDKVTIY 274

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            MN P+ L I  +  NL ++K +   K    +++VNIP  +++  ++G   L  + +VGR
Sbjct: 275 YMNKPISLLIDSIITNLDKLK-VSPNKFPDEFIMVNIPDFTMDYYKDGISNLHMSAVVGR 333

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
             R TPI HS++  +  NP W IP ++++KD++  L ++P Y++ +NIH+      +  +
Sbjct: 334 DKRPTPIFHSKMTYLELNPNWNIPENLVRKDLIPTLIEEPDYMEKHNIHVFYGWKDKKEI 393

Query: 284 EEVDWNSPEPP--------NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           + +D N              + F Q PG  NA+   K  F ++ + Y+HDT    LF   
Sbjct: 394 KNLDINKLTRYLDEKNGHIPYRFVQYPGDDNALGRIKFMFPNKYSVYLHDTDNKSLFERR 453

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            R  +SGC+R+     L   L     +     I+   +T K   ++    +PV+  Y + 
Sbjct: 454 YRVYSSGCMRISKPFQLLEALKPHLKSSDIAQIDRYRQTLKNKIMRFTKSLPVYTTYFTV 513

Query: 396 WSPKDSIIQFRDDIYGLDNV 415
           +  +D ++ FR DIYG D +
Sbjct: 514 F-KRDGMVFFRKDIYGYDKM 532


>gi|170741335|ref|YP_001769990.1| peptidoglycan binding domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168195609|gb|ACA17556.1| Peptidoglycan-binding domain 1 protein [Methylobacterium sp. 4-46]
          Length = 654

 Score =  332 bits (853), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 92/333 (27%), Positives = 152/333 (45%), Gaps = 27/333 (8%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            LP  P L  G     V  +R R  +      S   + A+DA V  A++ FQ   GL  +
Sbjct: 260 RLPKGPVLKPGMRDARVPLIRARFGL-----GSADDATAYDAAVAGAIERFQRERGLAAT 314

Query: 155 GMVDSSTLEAMNVPVDLRIRQ-LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           G++D  T+ A+  P   R    L  N+ R +  L  ++G +YV VNIP   +  +E G+V
Sbjct: 315 GILDPRTVAALAGPSPGRQEADLLANMERWR-WLPAELGRKYVWVNIPDLKVRVMEGGRV 373

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
              + VIVG+ D  TPI    ++  + NP W +P SI++ + +  L +DP Y       +
Sbjct: 374 VDEARVIVGKPDSPTPIFSGEMSYAVVNPSWNVPPSILKNEFLPRLARDPSYAARLGYQV 433

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
           + +                      RQ PG+ NA+   K  F + +  Y+HDTP   LF 
Sbjct: 434 VRKGNSIA----------------VRQPPGERNALGFIKFMFPNEHAVYLHDTPNRTLFA 477

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
              R  + GCVRV +       +L   PTW    +++++   + T V L  ++PVH  Y 
Sbjct: 478 RGARALSHGCVRVDDPFRFAEVVLG--PTWPTERLKKLIGKGERT-VMLPEKLPVHLAYF 534

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
           +  + +   ++  +D+YG++      + L  + 
Sbjct: 535 TLVADEAGGLREAEDLYGINARVKVALGLSNEA 567


>gi|237757093|ref|ZP_04585533.1| peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690747|gb|EEP59915.1| peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 506

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 107/414 (25%), Positives = 193/414 (46%), Gaps = 23/414 (5%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPII---SKET 74
           L L + L L    I    + E  N        +++      +      ++P +   + E 
Sbjct: 100 LTLKICLDLYNGTIDPKDIFETWNLPKKKF--NKYKELATIIKENQLENLPQLCQPNHEG 157

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
                + ++ Y +I++   +P LP   + L        V++LR+ L I G  D     S 
Sbjct: 158 YLTLRQYLSKYYEIMA--LYPSLPKINKKLKPKMKDKEVKKLRQLLYIYGFYD-GNTNSY 214

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +D  +  +VK FQ    L+  G++   TL  +N P++  I  +++N+ + +  L + + 
Sbjct: 215 IYDDELLESVKRFQESRNLEADGVIGVKTLNELNRPLNELIDIIKINMEKYR-WLPENLA 273

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD----RQTPILHSRINRIMFNPYWVIPR 248
              + VNIP+  L+  E+    L + VIVG+      R TPI + +I +I  NPYW +P+
Sbjct: 274 ESRIEVNIPSFELKYYEDNTEILSTEVIVGKNYEEDFRPTPIYYGKIEKITINPYWYVPK 333

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKIN 306
            I  KD++  ++ +P++L+D +  +    G+EV  ++++W      NF F   Q PG  N
Sbjct: 334 KIAAKDILKKIKSNPRFLEDFSFKVFY-NGQEVDYKKINWWEYNENNFGFTLIQSPGNKN 392

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            +   KI F +    Y+HDTP   LF +  R  +SGC+RV + + L  ++L       + 
Sbjct: 393 FLGRIKITFSNPFQVYLHDTPFKELFKHKKRAFSSGCIRVNDPLSLTSYILNK----DKS 448

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            I   + + KT  +    ++ V+  Y +A    D  I F +D+Y  D   + I+
Sbjct: 449 EILNYIDSNKTIGLTPCKDIYVYIFYFTALVKND-TIYFYEDLYNFDIKILNIM 501


>gi|315223727|ref|ZP_07865577.1| peptidoglycan binding domain protein [Capnocytophaga ochracea
           F0287]
 gi|314946302|gb|EFS98301.1| peptidoglycan binding domain protein [Capnocytophaga ochracea
           F0287]
          Length = 571

 Score =  331 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 95/332 (28%), Positives = 157/332 (47%), Gaps = 11/332 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +    G +   V+ LR  L   G     +      D+ +  A+K FQ  +GL P G +  
Sbjct: 239 KNFVYGYTDPEVESLRNALAKKGFRSVPEIDPQEVDSTLIWALKRFQRSNGLIPDGSLGI 298

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            TL  +N+    +   L++N+ R++      +G  Y++VNIP   L       +  ++ V
Sbjct: 299 QTLNRLNMNKARQRDLLRLNMERMRVF-NNDLGDDYIIVNIPDYKLFLYHKDSLIYQTKV 357

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHMIDEK 277
           +VGR    TPI    I  + F P W +P+SII+K+M+  +  ++DP+  K+    M  E 
Sbjct: 358 VVGRAQTSTPIFTDSIRSVEFRPTWSVPQSIIKKEMIPQMLLQEDPEKYKNRGYTMY-EN 416

Query: 278 GKEVFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           G+ +   EVDW +P      F F + P + N++   K    +  + Y+HDTP   LF   
Sbjct: 417 GRVIDPLEVDWTNPLVHKRAFYFVEAPSERNSLGLVKFLLNNNMSIYLHDTPSKYLFERE 476

Query: 336 VRFETSGCVRVRNIIDLDVWLLK---DTPTWSRYHIEEVVKTRKTT--PVKLATEVPVHF 390
            R  + GCVRV+N   L  +LLK   D  +W+   +++ +   K     VKL T+  ++ 
Sbjct: 477 QRALSHGCVRVQNPSQLAYYLLKNEGDGKSWTEEKVKDFMNNNKRNQYRVKLNTKYMINI 536

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +Y +    K      ++DIY LDN  +  I  
Sbjct: 537 LYYTISVDKKGEATIKNDIYDLDNEQLKDIKR 568


>gi|256820616|ref|YP_003141895.1| ErfK/YbiS/YcfS/YnhG family protein [Capnocytophaga ochracea DSM
           7271]
 gi|256582199|gb|ACU93334.1| ErfK/YbiS/YcfS/YnhG family protein [Capnocytophaga ochracea DSM
           7271]
          Length = 571

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 98/332 (29%), Positives = 157/332 (47%), Gaps = 11/332 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +    G +   V+ LR  L   G     K      D+ +  A+K FQ  +GL P G +  
Sbjct: 239 KNFVYGYTDPEVESLRNALAKKGFGSVPKIDPQEVDSTLIWALKRFQRSNGLIPDGSLGI 298

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            TL  +N+    +   L++N+ R++      +G  Y++VNIP   L       +  ++ V
Sbjct: 299 QTLNRLNMNKARQRDLLRLNMERMRVF-NNDLGDDYIIVNIPDYKLFLYHKDSLIYQTKV 357

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHMIDEK 277
           +VGR    TPI    I  I F P W +P+SII+K+M+  +  ++DP+  K+    M  E 
Sbjct: 358 VVGRAQSSTPIFTDSIRSIEFRPTWSVPQSIIRKEMIPQMLLQEDPERYKNRGYTMY-EN 416

Query: 278 GKEVFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           GK +   EVDW +P      F F + P + N++   K    +  + Y+HDTP   LF   
Sbjct: 417 GKVIDPLEVDWTNPLVHKRAFYFVEAPSERNSLGLVKFLLNNNMSIYLHDTPSKYLFERE 476

Query: 336 VRFETSGCVRVRNIIDLDVWLLK---DTPTWSRYHIEEVVKTRKTT--PVKLATEVPVHF 390
            R  + GCVRV+N   L  +LLK   D  +W+   +++ +   K     VKL T+  ++ 
Sbjct: 477 QRALSHGCVRVQNPSQLAYYLLKNEGDGKSWTEEKVKDFMNNNKRNQYRVKLNTKYMINI 536

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +Y +    K      ++DIY LDN  +  I  
Sbjct: 537 LYYTISVDKKGEATIKNDIYDLDNEQLKDIKR 568


>gi|294011534|ref|YP_003544994.1| putative peptidoglycan binding domain protein [Sphingobium
           japonicum UT26S]
 gi|292674864|dbj|BAI96382.1| putative peptidoglycan binding domain protein [Sphingobium
           japonicum UT26S]
          Length = 484

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 99/363 (27%), Positives = 159/363 (43%), Gaps = 37/363 (10%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
           R+     S  P  +        K +A Y+ I   GGWP L         SS  V   R R
Sbjct: 138 RLPQWALSLTPPYAG--YDGLRKGLANYERIRDAGGWPTLTA------QSSPDVV--RAR 187

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           + I          SV     +   ++  Q R+GL+P+G++D+ TL  +NVPVD RI  + 
Sbjct: 188 IAIE-------DKSVTPGEKLVDVLQRAQRRYGLNPTGLLDARTLRELNVPVDDRIAAIM 240

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
            N+ R +  + +++ +  V VNI AA L   E  +       + G  D  TP+L S I+ 
Sbjct: 241 ANMERWR-WMPRQLPVNRVQVNIAAAVLTVFEGDQPVTSMRAVTGAPDNATPMLVSSIHS 299

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
           I+ NP W +P SI ++++    R     L      ++               +PE     
Sbjct: 300 IVVNPPWNVPASIAKRELWPKGR---AALIRQGYKIV--------------GTPETGE-R 341

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
             Q  G  +A+   K +F +    Y+HDTP    F++  R  + GC+R+   + L   ++
Sbjct: 342 IVQPAGPNSALGRLKFDFNNPFAVYLHDTPSRAKFSSYDRLASHGCIRLEKPVPLAELMV 401

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
              P      I+ ++ T KT  V L  EV V+ +Y +A++  +  + FR D YG D +  
Sbjct: 402 ASDPDL-AGKIQSLIDTGKTQRVSLPKEVAVYLLYWTAFAGNNGTMNFRSDPYGWDKLLA 460

Query: 418 GII 420
             I
Sbjct: 461 AKI 463


>gi|120554149|ref|YP_958500.1| hypothetical protein Maqu_1223 [Marinobacter aquaeolei VT8]
 gi|120323998|gb|ABM18313.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
          Length = 318

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 90/277 (32%), Positives = 143/277 (51%), Gaps = 5/277 (1%)

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
             H L+  G+V   T  AMNVPV +RI Q++VNL R + +L  +    +VLV+I    + 
Sbjct: 42  QHHLLEEDGIVGRQTRAAMNVPVSVRIDQIRVNLERARWMLHGE-AEEFVLVDIAGYRIS 100

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
                    RS ++VG+  R+TP L S I  +  NP W +P +I  +DM+  +R+D  YL
Sbjct: 101 YFRPNGEIWRSRIVVGQPYRRTPSLRSMITHLTVNPTWTVPPTIFSEDMLPRIRRDITYL 160

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
              N+ +++  G+ +    +DW    P   + RQDPG  NA+    + F + +  Y+HDT
Sbjct: 161 DRQNLSVLNFYGQWLDPNSIDWW--NPGGIMLRQDPGPTNALGQVVLRFPNNHLVYLHDT 218

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LF+  +R  +SGC+RV+ +++L   LL+DT   +   I  V+   +T  + L   V
Sbjct: 219 PSQGLFSRQLRAFSSGCIRVQGVLELAQLLLEDT--DTAADINSVIAEGETRNIHLKRSV 276

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           PV   Y +     D  + FR D+Y  D   +  +  P
Sbjct: 277 PVILHYWTVHPGMDRELVFRPDVYQHDASLLRALDRP 313


>gi|188995993|ref|YP_001930244.1| Peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931060|gb|ACD65690.1| Peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 506

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 102/414 (24%), Positives = 190/414 (45%), Gaps = 23/414 (5%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA- 76
           L L + L L    I+   +    N        +++      +      ++P + +     
Sbjct: 100 LTLKICLDLYNGTINPKEIFRTWNLPKKKF--NKYKELANIIKENQLENLPELCQPNYDG 157

Query: 77  --QTEKAIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
               +K ++ Y +I++    P LP   + L        V++LR+ L I G  +     S 
Sbjct: 158 YLALKKYLSKYHEIIASN--PYLPKINKKLKPKTKDKEVKKLRQLLYIYGFYN-GNTNSD 214

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +D  +  +VK FQ    L+  G++   TL  +N P++  I  +++N+ + +  L + + 
Sbjct: 215 VYDDELLESVKRFQESRNLEADGIIGVKTLSELNRPLNELIDIIKINMEKYR-WLPENLA 273

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD----RQTPILHSRINRIMFNPYWVIPR 248
              + +NIP+  L+  EN    L + VIVG+      R TPI + +I +I  NPYW +P+
Sbjct: 274 ENRIEINIPSFELKYYENDIEVLSTEVIVGKNYEEDFRPTPIYYGKIEKITLNPYWYVPK 333

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKIN 306
            I  KD++  ++ +P++L+D    +    G+EV  ++++W      NF F   Q PG  N
Sbjct: 334 KIAAKDILKKIKSNPRFLEDFGFKVFY-NGQEVDYKKINWRKYNESNFNFTLIQSPGDKN 392

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            +   +I F +    Y+HDTP   LF    R  +SGC+R+ + + L  ++L       + 
Sbjct: 393 FLGRIRITFSNPFQVYLHDTPFKELFKQKRRAFSSGCIRINDALSLTSYILNK----DKN 448

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            I   + + KT  +  +  + V+  Y +A    D  I F +D+Y  D   + ++
Sbjct: 449 EIVNFINSNKTLDLVPSKNIYVYIFYFTALVKND-TIYFYEDLYNFDKKILNLM 501


>gi|300022605|ref|YP_003755216.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524426|gb|ADJ22895.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 597

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 98/386 (25%), Positives = 154/386 (39%), Gaps = 33/386 (8%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ----------DILSR 91
           +   S   D         +  I       S +   + +  ++  +           I  R
Sbjct: 150 QPSLSSAQDILAKISQSQEPDITLREWQPSADQFLKLKALLSDLRSKQSGEPQDLQIARR 209

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G         L   + S  V  L++R  +      ++G    FDA + +AVK FQ   GL
Sbjct: 210 G-------SSLQSKSKSPEVATLKKRFGV----ASAQGEETVFDAALVAAVKTFQASAGL 258

Query: 152 DPSGMVDSSTLEAMNVPV----DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
              G V  +T  A+          RI  +  N+   +  + Q++G   V VNIPA S+  
Sbjct: 259 RADGFVGPATRAALAGGGPENNADRIAAVIANMEEWR-WMPQELGATNVFVNIPAFSIRL 317

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
            ++G       V+VG  D+QTPI    +  I+  P W +P SI     +  L        
Sbjct: 318 TKDGAPVFEDRVVVGTADKQTPIFSKSMKTIVLRPEWNLPDSI----KLTALLSGRSV-- 371

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
           +   +++   G+ +    V+W       +   Q  G  NA+   K  F +++  Y+HDTP
Sbjct: 372 EQQGYVVMRNGRTIDSTRVNWAKANLREYTIFQPSGDDNALGLVKFLFPNKHAVYLHDTP 431

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR-KTTPVKLATEV 386
              LFN  VR  + GCVRVRN       LL      + + ++ +V+   K   V L T +
Sbjct: 432 SRHLFNERVRLYSHGCVRVRNPQVFAQDLLDIDRGAAAFDVKRLVRKGPKDNNVTLETPI 491

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGL 412
           PVH  Y + W   D   Q+  D YG 
Sbjct: 492 PVHVGYFTVWVGDDGQPQYFKDYYGH 517


>gi|42522720|ref|NP_968100.1| putative periplasmic protein YcbB [Bdellovibrio bacteriovorus
           HD100]
 gi|39573916|emb|CAE79093.1| putative periplasmic protein YcbB [Bdellovibrio bacteriovorus
           HD100]
          Length = 577

 Score =  328 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 100/393 (25%), Positives = 182/393 (46%), Gaps = 31/393 (7%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQR 113
              +  G+D   P  +       ++ +A+++ I + GGW ++ +  + L  GN   ++  
Sbjct: 182 AKALVAGLDKFAP--AHLRYVDLKQLLAYFRSIQTAGGWSQIKLAKKSLRQGNQDPAIPA 239

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           +R RL   G   PS G    +DA ++  ++  Q  +G+   G++ +  +  +N  V  R+
Sbjct: 240 IRGRLQSLGYAVPSTG--DIYDAELKRVIEDVQGVNGMGVDGVIGNEVMTFLNTSVADRV 297

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
            QL+VN+ +++  L + M  R+V VN+     +  + G+  +    I G+  R+TP+L +
Sbjct: 298 FQLEVNMEKLR-WLPKAMESRHVFVNLATTEFQFFDEGRKIMHFKTINGQSYRRTPVLRN 356

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQ--DPQYLKDNNIHMID-EKGKEVFVEEVDWNS 290
            ++ +  NP W  P SII KD +  LR     +YL+ + + +I    GKEV   +    S
Sbjct: 357 MLSFVELNPTWTAPESIIFKDKINTLRGKDGQEYLRKHRMRLIRKSDGKEVIPSDELLQS 416

Query: 291 PEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               NF +  RQDP + NA+ S K    +  + Y+H T  P LF+   R  +SGCVR+ +
Sbjct: 417 LSRSNFPYLLRQDPWRKNALGSIKFPLPNEWSIYLHHTDNPDLFDESKRHLSSGCVRLED 476

Query: 349 IIDLDVWLLKDTPT---------WSRYHIEEVVKTRK----------TTPVKLATEVPVH 389
                 ++L++            W +  +E  V   K             + L   VPV+
Sbjct: 477 PFTFAEYILRNNVAVKSTQTDDYWPKDKLESFVPPEKSEAYVDRENWEKRIHLKVPVPVY 536

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            +Y++    +D  ++F  D+YG D      +  
Sbjct: 537 LMYLTVDRAQDGAVRFVKDVYGQDERVAKTMKA 569


>gi|332186707|ref|ZP_08388450.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
 gi|332013359|gb|EGI55421.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
          Length = 476

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 100/406 (24%), Positives = 160/406 (39%), Gaps = 28/406 (6%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIAQ 77
            L    +L       + L E+      S        N L   D+    D          +
Sbjct: 80  ALRFASALARGATDPTKLYEVYTIPRPSPDLKAGLANALRSGDLTKWLDGLAPQDSNYKK 139

Query: 78  TEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
              A    +          +     +  G S   +  +   L+I   L P       +  
Sbjct: 140 LSDAYLKLKQQPQGNDGQVVDTGEAIKPGASDPRMPAIVRELVILDYLTPDAAQGDRYTP 199

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +  AV+  Q  +G+ P G++ +  L  +N+    R R + V + R++  LE+      +
Sbjct: 200 AIGDAVRRMQADYGMKPDGIIGNEALAILNMSDADRARAIAVAMERLR-WLERTPPATRI 258

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            VNI AA L    +GK+     V+VG  D +TP L S I R++ NP W +PRSI +K++ 
Sbjct: 259 DVNIAAARLSYWRDGKIVDSRRVVVGEPDTETPQLGSPIFRLVANPTWTVPRSIQKKEL- 317

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
              ++   YL+ NN+ + D                        Q PG  N++   K +  
Sbjct: 318 --AQKGAGYLRANNMELKDGW--------------------IVQQPGPKNSLGLAKFDMQ 355

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           + +  Y+HDTP   LF  V R  + GCVRV + +     L KD      +H     +T K
Sbjct: 356 NDHAIYLHDTPAKPLFAMVQRQRSHGCVRVEDALGFAEMLAKDEGVVDEWH--RARETGK 413

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            T VKL  ++PV  +Y +    KD     R+D YG D+     +  
Sbjct: 414 ETFVKLPRQIPVRLLYQTVLFDKDGEPIVRNDPYGWDDRVGSALGF 459


>gi|157961829|ref|YP_001501863.1| peptidoglycan-binding domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157846829|gb|ABV87328.1| Peptidoglycan-binding domain 1 protein [Shewanella pealeana ATCC
           700345]
          Length = 434

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 99/395 (25%), Positives = 180/395 (45%), Gaps = 14/395 (3%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE 79
           L   L +++    ++    ++      +    F      + +  +  + +I ++ IA   
Sbjct: 46  LAFDLGVIDSAAESTNTVGLVKLLNKELFQVEF----TSLSLSTEQYLKLIKRKDIASYR 101

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDA 136
           + I  Y+ +  R  WP +    L LG     V +LR  L+  GD++P   +      +D 
Sbjct: 102 RLIKQYKAL-DRFQWPMINPIELRLGLRVKEVAKLRWVLVKLGDMEPHTIAAYRESIYDP 160

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            VE+ +K FQ+RHGL   G + + TL ++N     R+ QLQ  L     L +      YV
Sbjct: 161 SVEAGLKRFQIRHGLSVDGKLGNQTLLSINTKPSFRVVQLQKAL--KLSLKKFDEEQEYV 218

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            VN+   +L   +NG   L+  VIVG+   +TP L++ ++ +  NP W  P SII +D+M
Sbjct: 219 FVNLTDYTLRISKNGVEQLKMPVIVGKPSSKTPELNTVVSVVTINPTWTPPASIIYQDIM 278

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP----EPPNFIFRQDPGKINAMASTK 312
             + + P YL++NN  +   K           ++     +       Q  G  NA+   +
Sbjct: 279 KSVDEHPNYLRNNNFVLKSYKTGIEDSNLAGMDTAILKHKLKTSTLVQRSGDKNALGKFR 338

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
               + +  ++HDTP   LF    R  + GC+R+        +L+   P  +++  ++ +
Sbjct: 339 FTIPNTSAIFLHDTPNKYLFKRANRALSHGCIRLSEPERFAHYLISKEPLQTQHLFQKAL 398

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
           KT KT   +L + +P++ +Y + W  KD  +Q R+
Sbjct: 399 KTNKTMHFRLRSRLPINIIYQNVWIDKDGRLQIRE 433


>gi|149911416|ref|ZP_01900034.1| peptidoglycan binding domain protein [Moritella sp. PE36]
 gi|149805524|gb|EDM65529.1| peptidoglycan binding domain protein [Moritella sp. PE36]
          Length = 512

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 112/401 (27%), Positives = 181/401 (45%), Gaps = 19/401 (4%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
                L+L    I +      +  + ++  + R       +   IDS +P  +   + + 
Sbjct: 104 ATDKALTLELYHIASQSYGNQLKSAANNPDDFRTALINDTLPAYIDSAMPQFNA--VIRL 161

Query: 79  EKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAF 134
            +AI  Y+ I     WP+L       LG     V+ LR++LI   DL     SK     F
Sbjct: 162 RQAINKYKGI-KNIAWPKLTDSFNPQLGQGHAEVKILRKKLITFNDLRTVSTSKHRLHIF 220

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  + + +K FQ R+GL P+G ++++T  A+N  +D RI +LQ+NL R    L +    +
Sbjct: 221 DQSIINGLKHFQRRNGLKPTGRLNATTKNALNQNIDSRINKLQINLWRWLS-LPRIPPTK 279

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y++VNIPA  L  ++ G+  +   VIVG+   QTPI+ + +N +  NP W   R+II  D
Sbjct: 280 YIMVNIPAFDLRLIDKGEALMEMKVIVGKPSNQTPIMITEVNSVTLNPTWTPTRNIINND 339

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE-PPNFIFRQDPGKINAMASTKI 313
           ++ L  ++   L   N ++    G      EV  N  E    +   Q PG  NA+ + + 
Sbjct: 340 LLPLHNKNHTALNSLNFYLAKGYGANTLYREVPPNLQEMLKQYRLVQRPGSNNALGNVRF 399

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              + N  ++HDTP   LF    R  + GC+R+    DL   L           I +   
Sbjct: 400 NIKNNNAIFLHDTPTKYLFKRQNRAFSHGCIRLEKSDDLLTIL----------RINQRKN 449

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              T  ++L   +PV   Y +AW      I +R+D+Y  D 
Sbjct: 450 NSGTKHLRLQQSLPVFITYQTAWIDNLGEINWRNDLYNKDK 490


>gi|167624211|ref|YP_001674505.1| peptidoglycan-binding domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354233|gb|ABZ76846.1| Peptidoglycan-binding domain 1 protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 444

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 103/386 (26%), Positives = 176/386 (45%), Gaps = 14/386 (3%)

Query: 34  SVLDEIIN--ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
             ++E++N       +    F        + ++  + ++ ++ I    K I  Y+ +  R
Sbjct: 55  ESVNELMNMVNLARLLDRQVFWGSSEHQSLSVEQYLNLVERKDIQSLRKLIKHYRSL-ER 113

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMR 148
             WP +    L LG  +  V +LR  L   GD+ P          FD  VE+ +KLFQ R
Sbjct: 114 YQWPTVAPMELRLGLRTKEVAKLRWILTQVGDITPYSIPAYRESIFDPSVEAGLKLFQRR 173

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL-MRIKKLLEQKMGLRYVLVNIPAASLEA 207
           HG    G + S TL ++N    +R+ QLQ  L  R+K+         YVLVN+   +L  
Sbjct: 174 HGHAVDGKLGSQTLLSLNTEPSIRVAQLQNALKQRLKRF---DEAKDYVLVNLMDHTLRI 230

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
            +NG   L   VIVG+   +TP L++ I+ I  NP W  P SII +D++  + + P YL+
Sbjct: 231 TKNGVEQLVMPVIVGKPTSKTPELNTTISVITVNPSWTPPASIIYQDILQSVDKQPNYLR 290

Query: 268 DNNIHMIDEKGKEVFVE----EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
           +N+      + K +       +      +    +  Q PG  NA+   +    + +  ++
Sbjct: 291 NNDFAFKSNETKHIDHNVAGMDPKSLKNKLKKSVLVQLPGTKNALGKYRFTIPNSDAIFL 350

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF    R  + GC+R+        +L+   P  +R   +  VK+++T   +L 
Sbjct: 351 HDTPSKHLFKRQNRALSHGCIRLSQPALFAQYLINKEPAETRLKFKNAVKSKQTRHFRLT 410

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDI 409
           +++ +  +Y + W  KD  +Q R  I
Sbjct: 411 SQLSIDVIYQTVWIDKDGSLQVRGTI 436


>gi|256425547|ref|YP_003126200.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256040455|gb|ACU63999.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 553

 Score =  325 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 100/350 (28%), Positives = 165/350 (47%), Gaps = 8/350 (2%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
               + A   ++   S   W  LP   L   +++   Q L  RL+ SG LD S G S   
Sbjct: 210 YQLLKSAWVNFKGKYSEMKWDSLP---LTYTDTAGYRQLLINRLVQSGHLDTSGGHSSD- 265

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
            + ++  ++ FQ    +   G     T++ MN        Q+ +N+ R +K L   +  R
Sbjct: 266 TSLLKKGIRAFQKEFNMYEDGQAGKKTIQTMNKTFADWEVQVALNMDRWRK-LPDTLPQR 324

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y++VN+P   +E V++G V + S VIVG    +TP+L+SR+   +  PYW +P SI  K+
Sbjct: 325 YIMVNVPGYRMELVDSGTVAVTSKVIVGAPRTRTPLLNSRMTNFVMYPYWRVPFSITIKE 384

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
           M+  +++D  YL   N+ +ID  G  +  + V W+      F +  RQ  G  N++   K
Sbjct: 385 MLPAIQRDRAYLAKKNLEIIDSHGNAISPDSVKWSKLSKNYFPYVLRQMDGIENSLGIMK 444

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F ++   Y+HDT    LF N  R  + GCVRV+    L ++L KD     R  +   +
Sbjct: 445 FNFMNKYAVYLHDTNARGLFANSYRALSHGCVRVQQWDSLSMYLTKDDTRHPRDSMRRWL 504

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
                  + +   VP++F Y +A   +D  +   +DIYG D +    +  
Sbjct: 505 ANGDKKQIDIQHSVPIYFRYFTA-EGRDGRLVLHEDIYGEDRILRKQMKR 553


>gi|94498521|ref|ZP_01305077.1| peptidoglycan binding domain protein [Sphingomonas sp. SKA58]
 gi|94422064|gb|EAT07109.1| peptidoglycan binding domain protein [Sphingomonas sp. SKA58]
          Length = 484

 Score =  325 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 169/379 (44%), Gaps = 46/379 (12%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              ++ +D  D +  R+        P    ET     + +A Y+ I  +GGW  L     
Sbjct: 129 LAKAVSDDDLDRWANRLTP------PWAGYET---LRQGLARYEAIRDQGGWQSLSAS-- 177

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                  S   +R+R+ +          SV+ D  +   ++  Q R+GL+P+G +D+ TL
Sbjct: 178 ------SSSDAIRKRIAME-------DPSVSPDEKLADIIQRAQRRYGLNPTGNLDARTL 224

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            A+NV VD RI  +  N+ R +  + + + +  V VNI AA L   E  +       + G
Sbjct: 225 AALNVGVDDRIAAIMANMERWR-WMPRSLPVNRVQVNIAAAVLTLFEGDQPVTSMRAVTG 283

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI-DEKGKEV 281
             D QTP+L S I+ I+ NP W +P SI ++++    R     L      ++   +G E 
Sbjct: 284 SPDNQTPMLSSSIHSIVVNPPWNVPMSIARRELFPKGRAT---LIRQGYKIVKTPEGGE- 339

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                             Q  G  +A+   K +F +    Y+HDTP    F++  R  + 
Sbjct: 340 ---------------RIVQPAGPNSALGRLKFDFNNPFAVYLHDTPARGKFSSYDRLASH 384

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GC+R+   + L   ++  +P  +   I+ ++   KT  V L  +V V+ +Y +A++  D 
Sbjct: 385 GCIRLEKPVALAEQMVAASPDLN-GQIQNLIDEGKTQRVSLPQDVAVYLLYWTAFANGDG 443

Query: 402 IIQFRDDIYGLDNVHVGII 420
           ++ FR+D YG D +    I
Sbjct: 444 VVSFRNDPYGWDKLLAQKI 462


>gi|307294368|ref|ZP_07574212.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum
           L-1]
 gi|306880519|gb|EFN11736.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum
           L-1]
          Length = 485

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 154/346 (44%), Gaps = 35/346 (10%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
                K +A Y+ I   GGWP L         S+  V   R R+ I          SV  
Sbjct: 154 YDGLRKGLANYERIRDAGGWPTLTA------QSAPDVV--RARVAIE-------DKSVTP 198

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
              +   ++  Q R+GL+P+G++D+ TL  +NVPVD RI  +  N+ R +  + +++ + 
Sbjct: 199 GEKLVDVLQRAQRRYGLNPTGLLDTRTLRELNVPVDDRIAAIMANMERWR-WMPRQLPVN 257

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            V VNI AA L   E  +       + G  D  TP+L S I+ I+ NP W +P SI +++
Sbjct: 258 RVQVNIAAAVLTVFEGDEPVTSMRAVTGAPDNATPMLVSSIHSIVVNPPWNVPASIAKRE 317

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
           +    R     L      ++               +PE       Q  G  +A+   K +
Sbjct: 318 LWPKGR---AALIRQGYKIV--------------GTPETGE-RIVQPAGPNSALGRLKFD 359

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           F +    Y+HDTP    F++  R  + GC+R+   + L   ++   P      I+ ++ T
Sbjct: 360 FNNPFAVYLHDTPSRAKFSSYDRLASHGCIRLEKPVPLAELMMAGNPDL-AGKIQSLIDT 418

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            KT  V L  EV V+ +Y +A++  +  + FR D YG D +    I
Sbjct: 419 GKTQRVSLPREVAVYLLYWTAFASNNGTMSFRSDPYGWDKLLAAKI 464


>gi|163752572|ref|ZP_02159755.1| hypothetical protein KT99_11874 [Shewanella benthica KT99]
 gi|161327545|gb|EDP98746.1| hypothetical protein KT99_11874 [Shewanella benthica KT99]
          Length = 371

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 93/286 (32%), Positives = 154/286 (53%), Gaps = 4/286 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +    T   I +   +  +  W EL     L  G++   V  +  RL   GDL     +S
Sbjct: 87  KDYLATSNNIRYLLWLDQKMDWNELVSNSWLKQGDNHSLVPEISRRLNGLGDLGEYDSVS 146

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FDA V++AV+ FQ RHGL   G++   T+  +N+    R   L +N +   + L   +
Sbjct: 147 TLFDANVKNAVRHFQQRHGLKIDGIIGPETIRWINITPVKRAELLAINFINKTRYLA-SI 205

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
              ++++NIPA  LE ++NG+V L+S VIVG+  RQTP+L SRI+ ++ NP W +PRS++
Sbjct: 206 EPIFLIINIPAFELELIDNGQVALQSRVIVGKPYRQTPLLISRISNLVINPSWRVPRSLL 265

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMA 309
            +D++  +R+D  Y++  N ++ D +G+ V     +W       F +R  Q PG+ N + 
Sbjct: 266 IRDLLPKVREDGGYIQAGNFNVFDNQGQMVSKTAQEWQDLAHGRFPYRLVQQPGEGNTLG 325

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
             K  F ++ + Y+HDT +  LF+   R  +SGC+R+ N+  L  W
Sbjct: 326 RYKFYFENKYSVYLHDTADKELFDESNRALSSGCIRIENVEGLANW 371


>gi|332188328|ref|ZP_08390054.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
 gi|332011641|gb|EGI53720.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
          Length = 428

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 99/392 (25%), Positives = 163/392 (41%), Gaps = 43/392 (10%)

Query: 38  EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL 97
           ++      ++   + D +L  +  G          E   +  +A   Y  +      P  
Sbjct: 62  DLRAGLARAMQEGKLDEWLESLAPG---------DENYRRLSQA---YVALRKSSNAPPT 109

Query: 98  PI----RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           PI    +P+  G S   +  +  +L+    LD +      +   + +AVK  Q  +G+DP
Sbjct: 110 PIPDAGKPIEPGKSDPRIPAIAAQLVAFDYLDKAAA-GAVYTPPMVAAVKRMQADYGIDP 168

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            GM+ +  LE +N+    R R + VN+ R++  LE+      + VN+ AA L    +GK+
Sbjct: 169 DGMIGTDALEILNLSDADRARAIAVNMERLR-WLERNPPATRIDVNLAAARLAYWRDGKL 227

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
                V+VG  +  TP L S I R++ NP W +PRSI +K++     +   YL+ NN+  
Sbjct: 228 VDTRKVVVGEPETATPQLGSPILRLVANPTWTVPRSIQRKEL---AGKGAGYLRRNNMVW 284

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
            D                        Q PG  NA+   K +  +  + Y+HDTP   LF+
Sbjct: 285 KDGW--------------------IVQQPGPKNALGLVKFDMQNEQSIYLHDTPAKALFS 324

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
            V R  + GCVRV + +     L +D    + +H      T K + V L   VPV  +Y 
Sbjct: 325 EVQRQRSHGCVRVEDALGFAEMLARDQGVDAEWH--RARATGKESYVALPQPVPVRMLYQ 382

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIPLPED 425
           +           R D YG ++     +  P  
Sbjct: 383 TVLFDDSGEPVVRSDPYGWNDRVASALGFPAS 414


>gi|322434022|ref|YP_004216234.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX9]
 gi|321161749|gb|ADW67454.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX9]
          Length = 625

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 89/311 (28%), Positives = 154/311 (49%), Gaps = 15/311 (4%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           S  + A +  AVK +Q RH L  +G + ++T+ ++NVP+  R +QL  +L R++ L +  
Sbjct: 311 STVYTADLADAVKHYQSRHSLTANGQLTAATVTSLNVPLTARSQQLADSLERLRWLPDPY 370

Query: 191 MGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIP 247
           +    + VN+P   L    E+ +   +  V+VG+V  + QTP+    +  ++F P+W +P
Sbjct: 371 LHAP-LQVNLPEFVLRGFGEDHQQQFKMNVVVGQVVGEHQTPVFTHMMKYVIFRPFWNVP 429

Query: 248 RSIIQKDMMALLRQDP-QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
            SII+K++   + +    YL+ +N   +D KG  V        S E    + R+ PG  N
Sbjct: 430 VSIIKKELAGHIAKSGVGYLEAHNFETVDAKGAHVNASA---ESIERGGVVVREKPGPKN 486

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT-WSR 365
           ++   K  F +  + Y+H TP   LF    R  + GCVRV +   L VW+L++TP  W  
Sbjct: 487 SLGLIKFMFPNEYDIYLHSTPAQQLFARSRRDFSHGCVRVEHPDQLAVWVLQNTPRNWDL 546

Query: 366 YHIEEVVKTR-KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN----VHVGII 420
             + + ++       V L  ++P+   Y +A   ++  + F DDIY  D     V    +
Sbjct: 547 QKVTDAMQNGADNHQVNLTKQIPIVIFYATARVDENGQVDFFDDIYHYDKQLEDVLAKGM 606

Query: 421 PLP-EDHPIDS 430
           P P +   +D 
Sbjct: 607 PYPSQQQHVDP 617


>gi|121591699|ref|ZP_01678927.1| putative peptidoglycan binding domain protein [Vibrio cholerae
           2740-80]
 gi|153819645|ref|ZP_01972312.1| putative peptidoglycan binding domain protein [Vibrio cholerae NCTC
           8457]
 gi|121546440|gb|EAX56672.1| putative peptidoglycan binding domain protein [Vibrio cholerae
           2740-80]
 gi|126509804|gb|EAZ72398.1| putative peptidoglycan binding domain protein [Vibrio cholerae NCTC
           8457]
          Length = 459

 Score =  319 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 76/262 (29%), Positives = 139/262 (53%), Gaps = 9/262 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+     + L +RL +  +LD +  L+    +DA +E  +K FQ  HGL   G++   
Sbjct: 201 RPGDPLSHREALVQRLALV-NLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQ 259

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+    S V+
Sbjct: 260 TMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFESKVV 317

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-- 278
           VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++ +I      
Sbjct: 318 VGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDP 377

Query: 279 KEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           + +    +DW + EP  F +  RQ  G  NA+ + K    +    Y+HDTP   LFNN  
Sbjct: 378 EVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNAS 437

Query: 337 RFETSGCVRVRNIIDLDVWLLK 358
           R  +SGC+RV N       LL 
Sbjct: 438 RAFSSGCIRVENAEKFAQTLLA 459


>gi|315633943|ref|ZP_07889232.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
 gi|315477193|gb|EFU67936.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
          Length = 487

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 82/245 (33%), Positives = 131/245 (53%), Gaps = 7/245 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L +N  R++ L   + G   + VNIP+  L    +G+V L S VIVG+  R+TP++ 
Sbjct: 231 LHRLAINAQRLRILPVFQDG---IFVNIPSYELNYYRDGQVILSSRVIVGQSSRKTPVMS 287

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           SR++ ++ NP W  P  +I +D++  +R+DP Y+  +   +ID  G  +    +DW +  
Sbjct: 288 SRLSNVVVNPPWNAPTRLINEDIIPKVRKDPSYIYRHGYTIIDGSGNTIDPYTIDWENMS 347

Query: 293 PPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              F +  RQ P   +A+ + K    S    Y+HDTP+  LF N  R  +SGCVRV    
Sbjct: 348 AKRFPYRLRQAPSDNSALGNYKFNMPSSEAIYLHDTPKRNLFGNKNRALSSGCVRVEKSD 407

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
            L   LLK+   W+    + V+K++KTT   + ++ PV   Y++AW  KD  +    DIY
Sbjct: 408 QLATILLKEA-GWTDETKQNVLKSKKTTSAGIKSDNPVFLYYVTAWVDKD-QVHTLPDIY 465

Query: 411 GLDNV 415
           G D  
Sbjct: 466 GYDKT 470


>gi|166012265|ref|ZP_02233163.1| YcbB [Yersinia pestis biovar Antiqua str. E1979001]
 gi|165988829|gb|EDR41130.1| YcbB [Yersinia pestis biovar Antiqua str. E1979001]
          Length = 252

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 82/239 (34%), Positives = 123/239 (51%), Gaps = 8/239 (3%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++ L         ++VNIP  SL   ++G   L S VIVGR  R+TP++ S +N ++ N
Sbjct: 1   RLRILPGHV--DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVN 58

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIF 298
           P W +P S++++D++   R D  Y + N   ++     +   +    +DW+   P NF +
Sbjct: 59  PPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPY 118

Query: 299 --RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   L
Sbjct: 119 RLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANML 178

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           L+D   W+   +   VK   TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 179 LQDA-GWNDARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 236


>gi|332288328|ref|YP_004419180.1| L,D-transpeptidase catalytic domain protein [Gallibacterium anatis
           UMN179]
 gi|330431224|gb|AEC16283.1| L,D-transpeptidase catalytic domain protein [Gallibacterium anatis
           UMN179]
          Length = 469

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 93/300 (31%), Positives = 152/300 (50%), Gaps = 16/300 (5%)

Query: 124 LDPSKGLSVAFDA----YVESAVKLF-QMRHGLDPSGMVDSSTLEAMNVPVDLR--IRQL 176
           L   + ++   DA     + + V  F Q+ H    +     + L  +         + +L
Sbjct: 160 LPSDEVINAWLDAVSQQQLAAFVAKFDQVNHRYAQTK---KAILSELTKSTADSNVLAKL 216

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
            +NL R++ + + + G   + VNIP   L    NG+  L S VIVG+  R+TP++ S+++
Sbjct: 217 AINLQRLRFIPDFETG---IFVNIPTFQLHYYRNGEEILSSRVIVGKKARKTPVMMSKLS 273

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
            I+ NP W  P  +I +D++  +R+DP Y+  N   +ID KG  +    +DW +     F
Sbjct: 274 NIVVNPPWNAPVRLINEDLIPKVRKDPSYIYRNGYTIIDSKGNTIDPYTIDWENMTAKRF 333

Query: 297 IF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
            +  RQ PG  +A+ + K    S++  Y+HDTP   LFNN  R  +SGC+RV    +L  
Sbjct: 334 PYRLRQAPGGDSALGNFKFNMPSKDAIYLHDTPNHRLFNNKNRAISSGCIRVNKSDELAT 393

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            LL +   WS     +V+K+RKTT V + +  PV+  Y++AW+     +    DIYG D 
Sbjct: 394 LLLTEA-GWSVDKKAQVLKSRKTTSVPIQSTNPVYLYYVTAWADAQGKVHTVADIYGYDQ 452


>gi|52424877|ref|YP_088014.1| hypothetical protein MS0822 [Mannheimia succiniciproducens MBEL55E]
 gi|52306929|gb|AAU37429.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 486

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 19/309 (6%)

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKL---FQMRHGLDPSGMVDSSTLEAMNVPV------- 169
           I+G      G +        SAVK    F   + L  +  +   T++ +           
Sbjct: 171 INGYKPAKPGETDV--EEWLSAVKNGQNFAYVNSLTTNNSIYQQTIDKIGSSDFDDDKSV 228

Query: 170 -DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
               + +L +N  R++ +     G   + VNIP+  L    + ++ L S VIVG+ +R+T
Sbjct: 229 NSAILYKLALNAQRLRVIPNFSNG---IFVNIPSYQLNYYRDNQLILNSRVIVGKKERRT 285

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P+++S+++ ++ NP W  P  +I +D++  ++++P YL  +   ++D KG +V    ++W
Sbjct: 286 PVMYSKLSNVVVNPPWNAPTRLINEDIVPKIKKNPGYLSAHGYSILDSKGNKVNPNSINW 345

Query: 289 NSP-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
            +      +  RQD G  +A+   K    S +  Y+HDTP   LFN   R  +SGCVRV 
Sbjct: 346 AAIGSKFPYRIRQDAGDNSALGRFKFNMPSSDAIYLHDTPNHNLFNKQDRALSSGCVRVE 405

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
               L   LLK+   WS    + V+ ++KTT   + ++ PV+  Y++AW  ++  +    
Sbjct: 406 KSNQLASILLKEA-GWSEDKKQRVLNSKKTTSAPIYSDNPVYLYYVTAWV-ENGQVNTLP 463

Query: 408 DIYGLDNVH 416
           DIYG D V 
Sbjct: 464 DIYGYDIVQ 472


>gi|254363167|ref|ZP_04979216.1| hypothetical protein MHA_2750 [Mannheimia haemolytica PHL213]
 gi|110735335|gb|ABG89238.1| periplasmic protein precursor [Mannheimia haemolytica]
 gi|153095061|gb|EDN75612.1| hypothetical protein MHA_2750 [Mannheimia haemolytica PHL213]
          Length = 510

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G + L+S VIVGR DR+TP+++S+
Sbjct: 257 KLALNAQRLRIIPSFNNG---IFVNIPSYQLYYFRDGNLALQSKVIVGREDRRTPVMYSK 313

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP--- 291
           ++ ++ NP W +P SI+ KD++  L +DP Y    +  ++D  G ++    V+W+     
Sbjct: 314 LSNVVVNPPWNVPTSIMTKDIIPKLARDPGYADRASFEILDSSGNKINPRSVNWSQYLNA 373

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
           +   +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    +
Sbjct: 374 KSSPYRIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNRGLFGKTGRALSSGCVRVEKSDE 433

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W      +V+ ++KTT  ++ ++ PV+  Y++AW  +   +Q   DIY 
Sbjct: 434 LATILLKEA-GWGSDKKNQVLGSKKTTSAQIRSDNPVYLYYVTAWV-EGGKVQTLPDIYN 491

Query: 412 LDN 414
            D 
Sbjct: 492 FDA 494


>gi|261493954|ref|ZP_05990462.1| hypothetical protein COK_2352 [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261310386|gb|EEY11581.1| hypothetical protein COK_2352 [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 518

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G + L+S VIVGR DR+TP++ S+
Sbjct: 265 KLALNAQRLRIIPSFNNG---IFVNIPSYQLYYFRDGNLALQSKVIVGREDRRTPVMDSK 321

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP--- 291
           ++ ++ NP W +P SI+ KD++  L +DP Y    +  ++D  G ++    V+W+     
Sbjct: 322 LSNVVVNPPWNVPTSIMTKDIIPKLARDPGYADRASFEILDSSGNKINPRSVNWSQYLNA 381

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
           +   +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    +
Sbjct: 382 KSSPYRIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNRGLFGKTGRALSSGCVRVEKSDE 441

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W      +V+ ++KTT  ++ ++ PV+  Y++AW  +   +Q   DIY 
Sbjct: 442 LATILLKEA-GWGSDKKNQVLGSKKTTSAQIRSDNPVYLYYVTAWV-EGGKVQTLPDIYN 499

Query: 412 LDN 414
            D 
Sbjct: 500 FDA 502


>gi|261868418|ref|YP_003256340.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413750|gb|ACX83121.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 502

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 85/245 (34%), Positives = 133/245 (54%), Gaps = 7/245 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L +N  R++ L E   G   + VNIP+  L    +GK+ L S VIVG   R+TP++ 
Sbjct: 246 LHRLAINAQRLRILPEFDNG---IFVNIPSYQLNYYRDGKLVLNSRVIVGTDKRKTPVMF 302

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           SR++ ++ NP W  P  +I +D++  +R+DP Y+  N   +ID KG  +    +DW +  
Sbjct: 303 SRLSNVVVNPPWNAPTRLINEDIIPKVRRDPSYIYRNGYTIIDGKGNTIDPYTIDWENMT 362

Query: 293 PPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              F +  RQ P   +A+ + K    S +  Y+HDTP+  LF N  R  +SGCVRV    
Sbjct: 363 AKKFPYRLRQVPSDNSALGNYKFNMPSSDAIYLHDTPKRSLFGNKRRDLSSGCVRVEKSE 422

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           +L   LLK+   W+    + V+K+RKTT V + +  PV   Y++AW  K+  +    D+Y
Sbjct: 423 ELATVLLKEA-GWTAERKQSVLKSRKTTSVTVKSNNPVFLYYVTAWVDKE-QVHTLPDVY 480

Query: 411 GLDNV 415
           G D  
Sbjct: 481 GYDKA 485


>gi|261494761|ref|ZP_05991240.1| hypothetical protein COI_0554 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261309578|gb|EEY10802.1| hypothetical protein COI_0554 [Mannheimia haemolytica serotype A2
           str. OVINE]
          Length = 510

 Score =  316 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G + L+S VIVGR DR+TP++ S+
Sbjct: 257 KLALNAQRLRIIPSFNNG---IFVNIPSYQLYYFRDGNLALQSKVIVGREDRRTPVMDSK 313

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP--- 291
           ++ ++ NP W +P SI+ KD++  L +DP Y    +  ++D  G ++    V+W+     
Sbjct: 314 LSNVVVNPPWNVPTSIMTKDIIPKLARDPGYADRASFEILDSSGNKINPRSVNWSQYLNA 373

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
           +   +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    +
Sbjct: 374 KSSPYRIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNRGLFGKTGRALSSGCVRVEKSDE 433

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W      +V+ ++KTT  ++ ++ PV+  Y++AW  +   +Q   DIY 
Sbjct: 434 LATILLKEA-GWGSDKKNQVLGSKKTTSAQIRSDNPVYLYYVTAWV-EGGKVQTLPDIYN 491

Query: 412 LDN 414
            D 
Sbjct: 492 FDA 494


>gi|251792219|ref|YP_003006940.1| periplasmic protein [Aggregatibacter aphrophilus NJ8700]
 gi|247533607|gb|ACS96853.1| periplasmic protein [Aggregatibacter aphrophilus NJ8700]
          Length = 506

 Score =  316 bits (811), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 84/245 (34%), Positives = 132/245 (53%), Gaps = 7/245 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L +N  R++ L   + G   + VNIP+  L    +G+  L S VIVG+ +R+TP++ 
Sbjct: 251 LYRLAINAQRLRILPTFQNG---IFVNIPSYQLTYYRDGEAVLNSRVIVGKTERKTPVMF 307

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           SR++ ++ NP W  P  +I +D++  +R+DP Y+  N   +ID  G  +    +DW +  
Sbjct: 308 SRLSNVVVNPSWNAPTRLINEDIIPKVRKDPSYIYRNGYTIIDGNGNTIDPYTIDWENMT 367

Query: 293 PPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              F +  RQ P   +A+ + K    S +  Y+HDTP+  LF N  R  +SGCVRV    
Sbjct: 368 AKKFPYRLRQAPSDNSALGNYKFNMPSSDAIYLHDTPKRSLFGNKKRDLSSGCVRVEKSD 427

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
            L   LLK+   WS    + V+K+RKTT   + ++ PV   Y++AW  KD  +    DIY
Sbjct: 428 QLATILLKEA-GWSDERKQNVLKSRKTTSASIKSDNPVFLYYVTAWVDKD-QVHTLPDIY 485

Query: 411 GLDNV 415
           G D  
Sbjct: 486 GYDKA 490


>gi|260914201|ref|ZP_05920674.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260631834|gb|EEX50012.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 511

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 86/267 (32%), Positives = 138/267 (51%), Gaps = 16/267 (5%)

Query: 159 SSTLEAM--------NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
             TL A+        +     ++ ++ +N  R++ + E   G   + VNIP+  LE   +
Sbjct: 235 KQTLNALTALVKEDADKTALSKMYKMAINAQRLRVIPEFTDG---LFVNIPSYQLEYYRD 291

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G++ L S VIVG+  R+TP+++S+++ ++ NP W  P  +I +D++  +R+DP Y+  N 
Sbjct: 292 GQLVLTSRVIVGKKARKTPVMYSKLSNVVVNPPWNAPVRLINEDIIPKVRKDPSYIYRNG 351

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
             +ID KG  V    +DW +     F +  RQ PG  +A+ + K    S +  Y+HDTP 
Sbjct: 352 YTIIDGKGNSVDPYTIDWENMTAKKFPYRLRQAPGD-SALGNFKFNMPSSDAIYLHDTPN 410

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV     L   LLK+   WS      V+++RKTT   +A++ PV
Sbjct: 411 RGLFGKKDRALSSGCVRVEKSDQLATILLKEA-GWSEERKRSVLQSRKTTSANVASDNPV 469

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNV 415
              Y++ W  K        DIYG D+ 
Sbjct: 470 FLYYVTMWVNK-GQTHTLPDIYGYDST 495


>gi|170749212|ref|YP_001755472.1| peptidoglycan binding domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655734|gb|ACB24789.1| peptidoglycan-binding domain 1 protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 674

 Score =  314 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 91/334 (27%), Positives = 142/334 (42%), Gaps = 39/334 (11%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIIS----GDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            LP  P L +G     V  LR    +       LD   G    +D+ V  AV  FQ   G
Sbjct: 268 RLPAGPVLRVGMRDARVPLLRAHFNLENRPAATLDKGPGEPEEYDSGVADAVAKFQRGRG 327

Query: 151 LDPSGMVDSSTLEAMN------VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           L  +G ++  T+ A+        P       L VN+ R +  L   +G  Y+LVN+P   
Sbjct: 328 LPGNGTLNVQTVLALADAGRTARPTGGEAE-LIVNMERWR-WLPGDLGSDYILVNVPEYR 385

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L A   G +   + VIVG+ + +TP+    +   + NP W +P SI+ K M   L     
Sbjct: 386 LRAYRGGVMRDEARVIVGKPESRTPLFSGMMEYAVVNPSWYVPPSIL-KTMAPKLA---G 441

Query: 265 YLKD--NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
           Y         ++   G                +   RQ PG+ NA+   K  F +++  Y
Sbjct: 442 YGGKTWGGYEVVRRGG----------------HISLRQPPGERNALGFIKFMFPNQHAVY 485

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDTP   LF+   R  + GCVRV +   L   +L   P WS   +++++   + T ++L
Sbjct: 486 LHDTPNRSLFSASKRDFSHGCVRVDDPFRLADVVL---PNWSEDRLKKLIGKGERT-IRL 541

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
             ++PVH  Y +A+       +   D+YG D   
Sbjct: 542 PEKLPVHLAYFTAFVDDGGTYRTLPDLYGYDAPM 575


>gi|288957909|ref|YP_003448250.1| peptidoglycan-binding domain 1 protein [Azospirillum sp. B510]
 gi|288910217|dbj|BAI71706.1| peptidoglycan-binding domain 1 protein [Azospirillum sp. B510]
          Length = 434

 Score =  314 bits (804), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 94/319 (29%), Positives = 156/319 (48%), Gaps = 6/319 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           + LG+S   V RL +RL+  G L P+  ++  F A ++ AVK FQ+   + P G+V + T
Sbjct: 84  MKLGSSGERVGRLAQRLVELGLL-PADKVAELFTADIDHAVKAFQLAQRMKPDGLVGAGT 142

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
             A++         ++ + + ++           ++VN+   +   V  G+  L    IV
Sbjct: 143 RAALDRTPAEAAALMRQSAVAMRSF-RDTAPDNVLVVNLTDQTTTLVRGGEEELTMRAIV 201

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           GR  R+TP+L  RI  I+ NP W +P +++++D + +LR        N I  +D  G+EV
Sbjct: 202 GRPSRETPLLTDRITHIIVNPTWTVPPTVLKEDKLPMLRAKGTPGIQNAIVYLD--GQEV 259

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
             E VDW+   P      Q PG  NA+   +    +  + Y+H T EP LF   +R  +S
Sbjct: 260 APETVDWHDVTPGRVRIVQQPGNHNALGRFRFNLTNPYDIYLHGTNEPRLFARELRSISS 319

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVR+ +   L   LL+ +   +   I+ ++  ++   VKL T +PV FVY  A    D 
Sbjct: 320 GCVRLEDPRRLAELLLQGSSV-TPERIDRMLDKQQPQWVKLPTPMPVQFVYWIATVEADG 378

Query: 402 IIQFRDDIYGL-DNVHVGI 419
            ++   DIY   D+    +
Sbjct: 379 AVRLHPDIYDRADDAPTAM 397


>gi|197105669|ref|YP_002131046.1| peptidoglycan-binding domain 1 [Phenylobacterium zucineum HLK1]
 gi|196479089|gb|ACG78617.1| peptidoglycan-binding domain 1 [Phenylobacterium zucineum HLK1]
          Length = 605

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 30/370 (8%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL---PIRPLHLGNSSVS 110
           +    ++  + +  PI     +   ++A+  Y+      G PE+     R L  G     
Sbjct: 240 SLQEHLEAALAARNPI-----VENLDRALERYR--AQWSGLPEIFIPAGRELAPGVRDPR 292

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  LR RL +            A+D  +E AV+ FQ  HGL  +G  D +TLEA+N    
Sbjct: 293 VDLLRLRLGL-------PDTGGAYDEVLEGAVRAFQRAHGLPDTGRADRTTLEALNAGAA 345

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
              R ++ NL R    L    G R++LV+  A  L   ++G+      V+ G+  + TP+
Sbjct: 346 HYERLVEANLERASA-LPASFGERFILVDAAAGQLWYYDHGQQLAAMKVVTGKPSQPTPM 404

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP-QYLKDNNIHMIDEKGKE---VFVEEV 286
           +   ++ ++FNPYW +P  ++Q  +   + +    Y+++  + ++ +   +   +    V
Sbjct: 405 MVGMVSHLIFNPYWNVPEDLVQTSIAPKVLEHGLGYIEEEGLEVLSDYTADAVVLDPAAV 464

Query: 287 DWNSPEPPNF--IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           DW +          RQ PG  N M   K+   +    Y+HDTP    F    R  +SGCV
Sbjct: 465 DWRAVAAGALSVRVRQKPGPKNMMGKVKLMLPNPLGIYLHDTPHRGDFARSQRLASSGCV 524

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           R+ + + L   L       +   +       +   + LA   PV+  Y++A    D  I 
Sbjct: 525 RLEDAMSLARLLAGGDKAEAALAV-----GGEERRIDLAEPAPVYITYLTAAPTSDGFI- 578

Query: 405 FRDDIYGLDN 414
           FR D+YGLD 
Sbjct: 579 FRPDVYGLDA 588


>gi|293392039|ref|ZP_06636373.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952573|gb|EFE02692.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 502

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 85/245 (34%), Positives = 133/245 (54%), Gaps = 7/245 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L +N  R++ L E   G   + VNIP+  L    +GK+ L S VIVG   R+TP++ 
Sbjct: 246 LYRLAINAQRLRILPEFANG---IFVNIPSYQLNYYRDGKLVLNSRVIVGTDKRKTPVMF 302

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           SR++ ++ NP W  P  +I +D++  +R+DP Y+  N   +ID KG  +    +DW +  
Sbjct: 303 SRLSNVVVNPPWNAPTRLINEDIIPKVRRDPSYIYRNGYTIIDGKGNTIDPYTIDWENMT 362

Query: 293 PPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              F +  RQ P   +A+ + K    S +  Y+HDTP+  LF N  R  +SGCVRV    
Sbjct: 363 AKKFPYRLRQVPSDNSALGNYKFNMPSSDAIYLHDTPKRSLFGNKRRDLSSGCVRVEKSE 422

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           +L   LLK+   W+    + V+K+RKTT V + +  PV   Y++AW  K+  +    D+Y
Sbjct: 423 ELATVLLKEA-GWTAERKQSVLKSRKTTSVTVKSNNPVFLYYVTAWVDKE-QVHTLPDVY 480

Query: 411 GLDNV 415
           G D  
Sbjct: 481 GYDKA 485


>gi|116750212|ref|YP_846899.1| peptidoglycan binding domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116699276|gb|ABK18464.1| Peptidoglycan-binding domain 1 protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 587

 Score =  312 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 98/380 (25%), Positives = 153/380 (40%), Gaps = 35/380 (9%)

Query: 49  NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNS 107
            D+      R+ M                   A+A Y+D+ +     ++     +  G S
Sbjct: 218 EDQVKALSGRIPMSDYLKRLEPRSPHYRPLLNALARYRDLAANTTQQQVRAPSTMRPGES 277

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +V+ L++RL           ++  FDA  + AVK FQ  H ++P G V   T E +N+
Sbjct: 278 GNAVRDLQKRLRQEDFYRGE--ITGTFDAATQQAVKRFQAAHQIEPDGAVGQRTREWLNM 335

Query: 168 PVDLRIRQLQ--VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV- 224
           P   +   +   +NL+R     + +   RYV +NIP  +LE  ++G+      VIVG+  
Sbjct: 336 PFKQKAEMIAHGINLLRQS---QTRRSDRYVRINIPQFALEYYKDGQSLSSHRVIVGKAS 392

Query: 225 ------------DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
                       + QTP L S I +++ NP W +   I + ++ A    DPQY   +   
Sbjct: 393 GKKVKVLGKWMRENQTPTLTSNIEQVIINPRWYVSDRI-RLELDAQAGSDPQYFARHGY- 450

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
                          W  P        Q PG  N +   K EF +    Y+HDT +  LF
Sbjct: 451 -------VQMASLYPWGQP-----RLFQKPGPKNPLGQIKFEFPNPYAVYLHDTNQKSLF 498

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
               R  + GC+RV     L   LLKD         E  + + +   +KLAT VP+   Y
Sbjct: 499 QRTRRDFSHGCIRVEKAKHLAHLLLKDDQNPLADKTEPYLSSDRQLFIKLATPVPIIIEY 558

Query: 393 ISAWSPKDSIIQFRDDIYGL 412
           +     +D  + F  D YG 
Sbjct: 559 LPVSCNEDGQVIFFGDPYGW 578


>gi|332885569|gb|EGK05815.1| hypothetical protein HMPREF9456_02079 [Dysgonomonas mossii DSM
           22836]
          Length = 592

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 93/378 (24%), Positives = 177/378 (46%), Gaps = 33/378 (8%)

Query: 85  YQDILSR--GGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-------F 134
           YQ++  +   G+  +       LG+ +  +  + +RL ++G+   ++  S+         
Sbjct: 214 YQELKEKKEQGFKTITSTATYKLGDKNKHISEIAQRLALTGEYVIAESDSIRDDSSEMML 273

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +  A+ +F+ ++       +   T++A+N P+D  + +LQ N+ R +  + +    +
Sbjct: 274 DENLLEAINIFRKKNSYPEEKEIGKLTIDALNRPLDYYLEKLQANMERYRWKMTKAKHNK 333

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++ VN+ +A L A E   + L   V VG    +TP+L S I+ +  NP W IP SI QK+
Sbjct: 334 HIEVNVASAYLTATEQDSLPLIMKVCVGTATNKTPLLQSDISYLNLNPIWNIPTSIAQKE 393

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
           +  L ++DP Y+K +N+ +    GKEV +  ++W   +P  F +  RQ PG+ NA+   K
Sbjct: 394 VAVLQKKDPTYIKRHNMKLY-RNGKEVDITTINWKEVDPSKFSYTIRQSPGESNALGLVK 452

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW--------- 363
             F +  + Y+HDTP    F    R  + GCVRV+   DL  + +  T            
Sbjct: 453 FMFSNAFSVYLHDTPSKAAFGRKNRAVSHGCVRVQKPFDLAFFCMSTTSDDIYKDRLFYS 512

Query: 364 -SRYHIEEVVK--TRKTTPVKL------ATEVPVHFVYISAWS-PKDSIIQFRDDIYGLD 413
             +  I +  K   ++    KL        ++ +   Y + +  P D ++ + DD+Y  D
Sbjct: 513 IDKQPISKAGKKLAQENKLKKLPDILNPKEKISLFIDYYTVYMYPDDDMLYYADDVYEYD 572

Query: 414 NVHVGIIPLPEDHPIDSD 431
           +  +  +  P+   +  +
Sbjct: 573 SAILNAL-KPQHSKVKKE 589


>gi|325578156|ref|ZP_08148291.1| hypothetical protein HMPREF9417_1032 [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325159892|gb|EGC72021.1| hypothetical protein HMPREF9417_1032 [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 497

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 92/321 (28%), Positives = 160/321 (49%), Gaps = 21/321 (6%)

Query: 108 SVSVQRLRER-LIISGDLDPSKGLSVAFDAYVESAVKL-----FQMRHGLDPSGMVDSST 161
           S +V +  +R L  +    P        D + +SAVK      F   +GL     +   T
Sbjct: 172 SKNVNQQAQRWLYATNAYKPELPNQEIIDEW-QSAVKNNNVSGF--VNGLSNHNRLYRET 228

Query: 162 LEAM-----NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           ++++        +    ++L +N  R++ + + + G   + VNIP+  L+   +GK  L 
Sbjct: 229 VQSLPSMISASGISEMGKKLALNAQRLRVIPDFENG---IFVNIPSYQLKYYRDGKAILE 285

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
           S VIVG+ +R+TP+++SR++ ++ NP W  P  +I +D++  L++DP Y   +N  ++D 
Sbjct: 286 SRVIVGKNERRTPVMYSRLSNVVVNPPWNAPTRLINEDILPKLKRDPGYAAAHNYSILDS 345

Query: 277 KGKEVFVEEVDWNSP-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           KG  +    ++W+S  +   +  RQ  G  +A+ + K    S +  Y+HDTP   LF+  
Sbjct: 346 KGNTIDPYSINWSSIGDRFPYRIRQAAGD-SALGNYKFNMPSSDAIYLHDTPNHNLFSKK 404

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            R  +SGCVRV     L   LL++   WS      V+ ++KTT   + T  PV   Y++A
Sbjct: 405 DRALSSGCVRVEKSDQLASILLQEA-GWSEDRKRNVLASKKTTSANIRTNDPVFLYYVTA 463

Query: 396 WSPKDSIIQFRDDIYGLDNVH 416
           W  ++   Q   DIY  D+  
Sbjct: 464 WV-ENGQTQVLPDIYKYDDAA 483


>gi|15602135|ref|NP_245207.1| hypothetical protein PM0270 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720500|gb|AAK02354.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 515

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 83/245 (33%), Positives = 130/245 (53%), Gaps = 8/245 (3%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            ++ ++ +N  R++ +     G   + VNIP+  L    +GK+ L S VIVG+  R+TP+
Sbjct: 259 AQLYKIAINAQRLRVIPTFDNG---LFVNIPSYQLHYYRDGKLILTSKVIVGKKARKTPV 315

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
           L+S+++ ++ NP W  P  +I +D++  +R+DP Y+  N   +ID KGK +    +DW +
Sbjct: 316 LYSKLSDVVVNPPWNTPTRLINEDIIPRVRKDPSYIYRNGYTIIDSKGKTIDPYTIDWEN 375

Query: 291 PEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                F +  RQ PG  +A+ + K    S +  Y+HDTP   LF       +SGCVRV  
Sbjct: 376 MTAKKFPYRLRQAPGD-SALGNFKFNMPSSDAIYLHDTPSRGLFAKKDLALSSGCVRVEK 434

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
             +L   LLK+   WS       VK+RKT  V +A+  PV   Y++AW   +       D
Sbjct: 435 ADELASVLLKEA-GWSEERKVNTVKSRKTISVNVASNNPVFLYYVTAWVN-NGKTHTLPD 492

Query: 409 IYGLD 413
           IYG D
Sbjct: 493 IYGYD 497


>gi|307244929|ref|ZP_07527026.1| hypothetical protein appser1_1410 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307253883|ref|ZP_07535735.1| hypothetical protein appser9_1410 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258337|ref|ZP_07540078.1| hypothetical protein appser11_1400 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306854094|gb|EFM86302.1| hypothetical protein appser1_1410 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306863087|gb|EFM95029.1| hypothetical protein appser9_1410 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867521|gb|EFM99368.1| hypothetical protein appser11_1400 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 521

 Score =  309 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W      
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    D
Sbjct: 385 KNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSDD 444

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++  +    DIY 
Sbjct: 445 LASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENGKVYTLPDIYK 502

Query: 412 LDN 414
            D 
Sbjct: 503 FDT 505


>gi|303251945|ref|ZP_07338116.1| hypothetical protein APP2_0272 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247104|ref|ZP_07529156.1| hypothetical protein appser2_1030 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307256146|ref|ZP_07537933.1| hypothetical protein appser10_1510 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307262708|ref|ZP_07544336.1| hypothetical protein appser13_1350 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|302649375|gb|EFL79560.1| hypothetical protein APP2_0272 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306856353|gb|EFM88504.1| hypothetical protein appser2_1030 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306865327|gb|EFM97223.1| hypothetical protein appser10_1510 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306871963|gb|EFN03679.1| hypothetical protein appser13_1350 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 521

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W      
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    D
Sbjct: 385 KNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSDD 444

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++  +    DIY 
Sbjct: 445 LASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENGKVYTLPDIYK 502

Query: 412 LDN 414
            D 
Sbjct: 503 FDT 505


>gi|152978757|ref|YP_001344386.1| hypothetical protein Asuc_1085 [Actinobacillus succinogenes 130Z]
 gi|150840480|gb|ABR74451.1| conserved hypothetical protein [Actinobacillus succinogenes 130Z]
          Length = 494

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 87/276 (31%), Positives = 145/276 (52%), Gaps = 15/276 (5%)

Query: 149 HGLDPSGMVDSSTLEA----MN----VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           +GL  +  +   T+      +N    VPV+    +L +N  R++ + +   G   + VNI
Sbjct: 210 NGLHANNSLYQQTVNLIAGNLNSVNKVPVNDN-YKLAINAQRLRIIPDFYNG---IFVNI 265

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P+  L    NG++ L S VIVG+ +R+TP+++S+++ ++ NP W  P  +I +D++  ++
Sbjct: 266 PSYQLNYYRNGRLTLNSRVIVGKNNRRTPVMYSKLSNVVVNPPWNAPTRLINEDIIPKVK 325

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP-EPPNFIFRQDPGKINAMASTKIEFYSRN 319
           +DP YL  +   +ID KG  V    ++W S      +  RQ  G  +A+   K    S +
Sbjct: 326 RDPNYLVRHGYSIIDGKGNTVNPYNINWGSIGNKFPYRLRQAAGDNSALGRYKFNMPSSD 385

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             Y+HDTP   LFNN  R  +SGCVRV     L   LL +   WS    + V+ ++KTT 
Sbjct: 386 AIYLHDTPNHALFNNKNRALSSGCVRVDKSDQLASILLSEA-GWSSDKKQRVLNSKKTTS 444

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             + ++ PV+  Y++ W  ++  +Q   DIYG D V
Sbjct: 445 APILSDNPVYLYYVTTWV-ENGKVQSVPDIYGYDRV 479


>gi|303249825|ref|ZP_07336029.1| hypothetical protein APP6_1233 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251648|ref|ZP_07533553.1| hypothetical protein appser6_1700 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302651392|gb|EFL81544.1| hypothetical protein APP6_1233 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860845|gb|EFM92853.1| hypothetical protein appser6_1700 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 521

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W      
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    D
Sbjct: 385 KNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSDD 444

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++  +    DIY 
Sbjct: 445 LASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENGKVYTLPDIYK 502

Query: 412 LDN 414
            D 
Sbjct: 503 FDT 505


>gi|301156058|emb|CBW15529.1| predicted carboxypeptidase [Haemophilus parainfluenzae T3T1]
          Length = 489

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 88/320 (27%), Positives = 154/320 (48%), Gaps = 19/320 (5%)

Query: 108 SVSVQRLRER-LIISGDLDPSKGLSVAFDAYVES----AVKLFQMRHGLDPSGMVDSSTL 162
           S +V +  +R L  +    P        D +  +    AV  F   +GL     +   T+
Sbjct: 164 SKNVNQQAQRWLYATNAYKPELPNQEIIDQWQSAVKNNAVSDF--VNGLSNHNRLYRETV 221

Query: 163 EAMN--VPVD---LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           +++   +         ++L +N  R++ + + + G   + VNIP+  L+   +GKV L S
Sbjct: 222 QSLPSMISPSGISAIGKKLALNAQRLRIIPDFENG---IFVNIPSYQLKYYRDGKVLLES 278

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            VIVG+ +R+TP+++SR++ ++ NP W  P  +I +D++  L++DP Y   +N  ++D  
Sbjct: 279 RVIVGKNERRTPVMYSRLSNVVVNPPWNAPTRLINEDILPKLKRDPSYATAHNYSILDSN 338

Query: 278 GKEVFVEEVDWNSP-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           G  +    ++W+S      +  RQ  G  +A+ + K    S +  Y+HDTP   LF+   
Sbjct: 339 GNTINPHSINWSSIGNKFPYRIRQAAGD-SALGNYKFNMPSSDAIYLHDTPNHSLFSKKD 397

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGCVRV     L   LLK+   WS       + ++KT    + T  PV   Y++AW
Sbjct: 398 RALSSGCVRVEKSDQLASILLKEA-GWSEDKKRNALASKKTVSANIRTNDPVFLYYVTAW 456

Query: 397 SPKDSIIQFRDDIYGLDNVH 416
             ++       DIY  D+  
Sbjct: 457 V-ENGQTHVLPDIYKYDDAA 475


>gi|307260578|ref|ZP_07542270.1| hypothetical protein appser12_1530 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306869655|gb|EFN01440.1| hypothetical protein appser12_1530 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 521

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W      
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    D
Sbjct: 385 KNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSDD 444

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++  +    DIY 
Sbjct: 445 LASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENGKVYTLPDIYK 502

Query: 412 LDN 414
            D 
Sbjct: 503 FDT 505


>gi|32034588|ref|ZP_00134744.1| COG2989: Uncharacterized protein conserved in bacteria
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126207609|ref|YP_001052834.1| hypothetical protein APL_0121 [Actinobacillus pleuropneumoniae L20]
 gi|126096401|gb|ABN73229.1| hypothetical protein APL_0121 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 521

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 129/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W      
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    D
Sbjct: 385 KNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSDD 444

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++  +    DIY 
Sbjct: 445 LASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENGKVYTLPDIYK 502

Query: 412 LDN 414
            D 
Sbjct: 503 FDT 505


>gi|307249325|ref|ZP_07531319.1| hypothetical protein appser4_1390 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858619|gb|EFM90681.1| hypothetical protein appser4_1390 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 521

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N+ R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 268 KLALNVQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W      
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    D
Sbjct: 385 KNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSDD 444

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++  +    DIY 
Sbjct: 445 LASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENGKVYTLPDIYK 502

Query: 412 LDN 414
            D 
Sbjct: 503 FDT 505


>gi|239995151|ref|ZP_04715675.1| peptidoglycan binding domain-containing protein [Alteromonas
           macleodii ATCC 27126]
          Length = 481

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 91/266 (34%), Positives = 136/266 (51%), Gaps = 11/266 (4%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           ++P+ P L L ++S  V  L+ RL+  G        S  FD  +  AVK FQM  G++P 
Sbjct: 207 QIPVGPTLKLNSTSERVVLLKSRLLGPGTY------SELFDKDLLDAVKQFQMSAGIEPD 260

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+V SSTLEA+N      + ++  NL R +  L  +    Y+ VNI +  L     G+  
Sbjct: 261 GIVGSSTLEALNATTFSWLERIDANLERWR-WLPHQTWSTYLRVNIASFQLRGFTEGEET 319

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           L   VIVG   RQTP+    +  ++FNPYW +P SI  KD +A L+ +P  L +      
Sbjct: 320 LGMPVIVGTPVRQTPVFAESMKYMVFNPYWTVPFSIATKDKLAKLKTNPSLLVEQGYEAQ 379

Query: 275 DEK-GKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
                    V++ DW +     F +  RQ PG  NA+   K    +++  Y+HDTP+  L
Sbjct: 380 PAGVSGFSPVDKFDWTNVSRGTFHYTLRQKPGPHNALGKVKFMLPNKHAIYLHDTPDHSL 439

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLL 357
           F+ + R  +SGC+RV N + L  W+L
Sbjct: 440 FSKLERNFSSGCIRVSNPLKLSQWVL 465


>gi|240948089|ref|ZP_04752499.1| hypothetical protein AM305_04803 [Actinobacillus minor NM305]
 gi|240297569|gb|EER48061.1| hypothetical protein AM305_04803 [Actinobacillus minor NM305]
          Length = 539

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 132/243 (54%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 286 KLALNAQRLRIIPSFNNG---IFVNIPSYQLYYFRDGQLALQSKVIVGREDRRTPVMYSK 342

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W +P SI+ KD++  L ++P      +  ++D  G +V    V+W+     
Sbjct: 343 LSNVVVNPPWNVPTSILTKDIVPKLARNPGIADSLSYEILDGSGNKVNPRSVNWSQYLNA 402

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+   K    S +  Y+HDTP   LF+   R  +SGCVRV    +
Sbjct: 403 KSIPYRIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNHGLFSRTDRALSSGCVRVNKSSE 462

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL++   WS    + V+ ++KTT V + ++ PV+  Y+++W  +   +    DIY 
Sbjct: 463 LASILLREA-GWSAEKQQSVLASKKTTSVNIRSDNPVYLYYVTSWV-EGGKVYTLPDIYK 520

Query: 412 LDN 414
           LD+
Sbjct: 521 LDS 523


>gi|42522877|ref|NP_968257.1| putative peptidoglycan-binding protein [Bdellovibrio bacteriovorus
           HD100]
 gi|39574073|emb|CAE79250.1| putative peptidoglycan-binding protein [Bdellovibrio bacteriovorus
           HD100]
          Length = 526

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 97/383 (25%), Positives = 168/383 (43%), Gaps = 24/383 (6%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP--IRPLHLGNSSVSVQR 113
            +   + +D   P  S       + A+     +L  G W  +    +PL LG     + +
Sbjct: 145 QSDAKLALDKMAPQFS--VYQSLKMALERLYPLLETGLWENITPAKKPLSLGKKDPVIIK 202

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV--DSSTLEAMNVPVDL 171
           L+ERL   G       ++  FD  +  A+   Q+   + P G++     T    +V +  
Sbjct: 203 LKERLRQLGY--RIDSMNDTFDQDMLIAINDIQLNLKMKPDGVISPGGRTWRFFSVSLLD 260

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTPI 230
           R+ QLQ ++ +++    Q +  R++ VN   +     +    + +    I G  +R+TP 
Sbjct: 261 RLSQLQADMEQLR-WFPQNLEDRHIFVNTAFSHFMMTDKKNNISMSFKAINGTAERKTPT 319

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQ-----DPQYLKDNNIHMIDEK-GKEVFVE 284
           L  RI  ++ NP W IP ++   D + +L++       +Y  DN   +      + +   
Sbjct: 320 LRDRITYLVMNPTWTIPPTVFLNDKVEILKKLDTKGIRKYFTDNRFEVYTADFSRTIDPT 379

Query: 285 EVDWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            +DW S +    NF  RQ P   NA+   K    +    Y+HDT +  LF    R  +SG
Sbjct: 380 SIDWKSIKSSSVNFYIRQKPSYNNALGVVKFMMTNPYAIYLHDTNQRDLFGEAQRLRSSG 439

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR-----KTTPVKLATEVPVHFVYISAWS 397
           CVR+   +DL  +LL  T  WSR  IE  V        K T V L   +PV+ V +++  
Sbjct: 440 CVRLEKPLDLAEYLLAGTQ-WSRPQIENFVVKEGQLVDKETRVDLKEPMPVYLVPVTSQM 498

Query: 398 PKDSIIQFRDDIYGLDNVHVGII 420
             D +I+F +D+YG + + +  +
Sbjct: 499 NSDGVIRFVEDVYGHNQLILSQV 521


>gi|322515092|ref|ZP_08068099.1| hypothetical protein HMPREF0027_1851 [Actinobacillus ureae ATCC
           25976]
 gi|322118898|gb|EFX91080.1| hypothetical protein HMPREF0027_1851 [Actinobacillus ureae ATCC
           25976]
          Length = 530

 Score =  306 bits (785), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 131/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 277 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMYSK 333

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W+     
Sbjct: 334 LSNVVVNPPWNIPPTILTKDIIPKLARNPGFAGSAGYEIFDRKGNKINPRSVNWSQYVNS 393

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    D
Sbjct: 394 KNIPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSDD 453

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW+ ++  +    DIY 
Sbjct: 454 LASILLKEA-GWSMDRKQKVLASQKTTSANIRSDNPVYLYYVTAWA-ENGKVYTLPDIYK 511

Query: 412 LDN 414
            D 
Sbjct: 512 FDT 514


>gi|332826880|gb|EGJ99680.1| hypothetical protein HMPREF9455_03943 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 593

 Score =  305 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 95/386 (24%), Positives = 175/386 (45%), Gaps = 32/386 (8%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSK 128
           S++   +  +     + I   G + E+        LG+ S  ++ +  RL+++G+  P  
Sbjct: 203 SEDIYLRLREEYKLLRTIQETG-FKEITSGDVTYKLGDKSKHIKDIAGRLMLTGEYKPDS 261

Query: 129 GLSVAF----DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             S +     D  + +A+  F+ R+       V   T+ A+N P +  + +++ N+ R +
Sbjct: 262 ISSDSLHIKLDEELLAAINTFRRRNSYPEEAEVGKLTISALNRPFEYYLAKIRANMERYR 321

Query: 185 KLLEQKMGLRYVLVNIPAASLEA--VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
               +    +++ VN+ AA L A   +N  + L S V VG V  +TP+L S I+ +  NP
Sbjct: 322 WKRAKAKHYKHIEVNVAAAMLVANNTKNDSLPLISRVCVGSVRNKTPLLQSDISYMNLNP 381

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQ 300
            W +P SI QK++  L ++DP Y+K +N+ +  + GKEV V  +DW    P  F +  +Q
Sbjct: 382 IWNVPASIAQKEVAVLQKKDPTYIKRHNMKLY-KGGKEVDVSSIDWEDVNPSKFSYTIKQ 440

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           DPG  N++   K  F +  + Y+HDTP  + FN   R  + GCVRV+   DL  +     
Sbjct: 441 DPGGGNSLGLVKFMFNNAFSVYLHDTPSKLAFNRKNRAVSHGCVRVQKPFDLAFFCASPI 500

Query: 361 PTWSRYHIEEVVKTRKTTP-----------------VKLAT--EVPVHFVYISAWS-PKD 400
               +  +   +     +                  + +    ++ +   Y +A+  P D
Sbjct: 501 TEVYKDQLYHSINKPPVSDEGKKLLKEQKLKKLPDIINIDKDNKISLFIDYYTAFMYPDD 560

Query: 401 SIIQFRDDIYGLDNVHVGIIPLPEDH 426
             + + DDIY  D + +  +   +  
Sbjct: 561 EALYYADDIYEYDKLILDALNPNQTA 586


>gi|257465088|ref|ZP_05629459.1| hypothetical protein AM202_01165 [Actinobacillus minor 202]
 gi|257450748|gb|EEV24791.1| hypothetical protein AM202_01165 [Actinobacillus minor 202]
          Length = 537

 Score =  305 bits (782), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 131/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP+++S+
Sbjct: 284 KLALNAQRLRIIPSFNNG---IFVNIPSYQLYYFRDGQLALQSKVIVGREDRRTPVMYSK 340

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W +P SI+ KD++  L ++P      +  ++D  G +V    V+W+     
Sbjct: 341 LSNVVVNPPWNVPTSILTKDIVPKLARNPGIADSLSYEILDGSGNKVNPRSVNWSQYLNA 400

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+   K    S +  Y+HDTP   LF+   R  +SGCVRV    +
Sbjct: 401 KSIPYRIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNHGLFSRTDRALSSGCVRVAKSSE 460

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   WS    + V+ ++KTT   + ++ PV+  Y+++W  +   +    DIY 
Sbjct: 461 LASILLKEA-GWSAEKQQSVLASKKTTSANIRSDNPVYLYYVTSWV-EGGKVYTLPDIYK 518

Query: 412 LDN 414
           LDN
Sbjct: 519 LDN 521


>gi|219872270|ref|YP_002476645.1| hypothetical protein HAPS_2267 [Haemophilus parasuis SH0165]
 gi|219692474|gb|ACL33697.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
          Length = 516

 Score =  305 bits (782), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 79/243 (32%), Positives = 130/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           QL +N  R++ +     G   + VNIP+  L     GK+ L+S VIVGR DR+TP+++S+
Sbjct: 263 QLALNAQRLRLIPSFNNG---IFVNIPSYQLYYFREGKLVLQSKVIVGRNDRKTPVMYSK 319

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP+W +P +I  KD++  LR+DP         ++D KG +     ++W + E  
Sbjct: 320 LSNVVVNPHWNVPSTIKNKDLVPKLRKDPILADKLGYEILDGKGNKFSAHSINWAAYEGK 379

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
           N   +  RQ  G  +A+   K    S +  Y+HDTP   LF+   R  +SGCVRV    +
Sbjct: 380 NNFPYHIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNRGLFSKKNRALSSGCVRVAKADE 439

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL +   WS    ++V+ ++KTT   + ++ PV+  Y+++W  +   I    DIY 
Sbjct: 440 LATLLLAEA-GWSAQRKQDVLASKKTTSAPIRSDNPVYLYYVTSWI-EGGKIYTLPDIYQ 497

Query: 412 LDN 414
            D 
Sbjct: 498 FDK 500


>gi|167855604|ref|ZP_02478364.1| hypothetical protein HPS_03656 [Haemophilus parasuis 29755]
 gi|167853295|gb|EDS24549.1| hypothetical protein HPS_03656 [Haemophilus parasuis 29755]
          Length = 516

 Score =  305 bits (782), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 79/243 (32%), Positives = 129/243 (53%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           QL +N  R++ +     G   + VNIP+  L     GK+ L+S VIVGR DR+TP+++S+
Sbjct: 263 QLALNAQRLRLIPSFNNG---IFVNIPSYQLYYFREGKLVLQSKVIVGRNDRKTPVMYSK 319

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W +P +I  KD++  LR+DP         ++D KG +     ++W + E  
Sbjct: 320 LSNVVVNPPWNVPSTIKNKDLVPKLRKDPILADKLGYEILDGKGNKFSAHSINWAAYEGK 379

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
           N   +  RQ  G  +A+   K    S +  Y+HDTP   LF+   R  +SGCVRV    +
Sbjct: 380 NNFPYHIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNRGLFSKKNRALSSGCVRVAKADE 439

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL +   WS    ++V+ ++KTT   + ++ PV+  Y+++W  +   I    DIY 
Sbjct: 440 LATLLLAEA-GWSAQRKQDVLASKKTTSAPIRSDNPVYLYYVTSWI-EGGKIYTLPDIYQ 497

Query: 412 LDN 414
            D 
Sbjct: 498 FDK 500


>gi|294012199|ref|YP_003545659.1| hypothetical protein SJA_C1-22130 [Sphingobium japonicum UT26S]
 gi|292675529|dbj|BAI97047.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
          Length = 503

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 90/350 (25%), Positives = 147/350 (42%), Gaps = 33/350 (9%)

Query: 75  IAQTEKAIAFYQDILSR-GGWPELPIR---PLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
             +  +A A   D   R GG P++P+     L  G        LR RL +          
Sbjct: 178 YVKLREARA---DFAQRWGGLPQVPVPADVKLRPGMK-AGAAALRRRLGL--------AS 225

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
             A+D  + + VK FQ  HGL P G+  ++T+ A+N   D   R + +N+ R + L   +
Sbjct: 226 GTAYDKALVARVKAFQGDHGLKPDGVAGAATIAALNRGDDHYDRLIALNMERARLLPGPQ 285

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +  R+V+V+  +A L     G       V+VG  + QTP++   +     NPYW +P  +
Sbjct: 286 V--RHVVVDAASARLWYFSKGAQDGTMKVVVGAKESQTPMMAGMVRYATLNPYWNVPSDL 343

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPN--FIFRQDPGKI 305
           +++ +   +      L       + +     +++    VDW +          RQ PG  
Sbjct: 344 VERKLAPRMLNGAS-LTKLRYEALSDWSANARKLDPAAVDWRAVADGRTELRVRQLPGGD 402

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NAM   K  F +    Y+HDTP   L     R  ++GCVR+ +   L  W          
Sbjct: 403 NAMGKVKFMFPNDLGIYLHDTPSRDLLAKPARQFSNGCVRLEDAQRLGRWFFG------- 455

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
               +    +    V L   VPV+  Y++A   +D  ++F  D+YG D V
Sbjct: 456 -KPLKPASDKPEQHVPLPQPVPVYLTYLTAVPLEDG-VRFLPDVYGRDGV 503


>gi|296531943|ref|ZP_06894738.1| peptidoglycan-binding domain 1 protein [Roseomonas cervicalis ATCC
           49957]
 gi|296267730|gb|EFH13560.1| peptidoglycan-binding domain 1 protein [Roseomonas cervicalis ATCC
           49957]
          Length = 321

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 89/319 (27%), Positives = 150/319 (47%), Gaps = 8/319 (2%)

Query: 110 SVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            V  LR RL        +       +DA +E+AV+ +Q  H L+  G V   T   MN P
Sbjct: 3   RVPALRARLAAEDAELAAAPDGGALYDAPLEAAVRRWQAAHSLEVDGRVGPMTQRLMNRP 62

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
               + Q++V + + +       G R + VNIP   L  ++  +      V+VG+V R T
Sbjct: 63  AGAVVGQIRVAMDQRRGRGAAAPG-RRIEVNIPEFRLRVMDGARQVTAMNVVVGKVARAT 121

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEE 285
           P L  R+  + FNP W +P    ++D++   R+DP+ + +    +    G E   V    
Sbjct: 122 PPLAVRMTAVQFNPPWGVPERNAREDLLPKFRRDPRAMMEKGFRLFTVVGGERVEVDPMT 181

Query: 286 VDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
           VDW S  P  F +  RQD   ++A+   K    + ++ Y+HDTP+  LF    R  +SGC
Sbjct: 182 VDWASVNPQRFPYIVRQDASDVSALGRLKFVMPNGDDIYLHDTPDRHLFGRADRALSSGC 241

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           +R+   ++L   +L+  P W+R   +  + +R+T+ + L    PV   Y +    +    
Sbjct: 242 IRLSQPMELLDLVLEGVPGWNRERAQRALDSRQTSFLSLPRAWPVRLHYDTVVV-EQGQA 300

Query: 404 QFRDDIYGLDNVHVGIIPL 422
           +   DIYGLD  ++ ++  
Sbjct: 301 RLLSDIYGLDAAYLRLLDQ 319


>gi|330448515|ref|ZP_08312163.1| hypothetical protein PMSV_2819 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492706|dbj|GAA06660.1| hypothetical protein PMSV_2819 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 569

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 13/331 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAF------DAYVESAVKLFQMRHGLDPSGMV 157
           LG++      +   L   G L   +   V           +  A+K F+  +GL   G++
Sbjct: 217 LGDTIPHGSDVATVLWNLGYLTQPQYQQVIAQKKITNTGVMNQAIKAFETNYGLKADGIM 276

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
               +  +  P     R   +NL R +    +  G + ++VNIP  ++   +N K    S
Sbjct: 277 GPEVVAQLTCPYSSLARIAALNLQRERFAQLEGDGPQ-IIVNIPDYTMTLYDNQKPVFES 335

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            +I G   R T +  + IN ++ NPYW +P +I  ++ +   + +P +L+ N + +I+  
Sbjct: 336 DIIDGMPKRPTNLFQTYINTVVINPYWYVPETIKVQNTIPSAKANPNFLQRNRMDVINSW 395

Query: 278 G--KEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHD--TPEPIL 331
                V    ++W +  P  F   FRQDPG  NA+           + YMHD    E  L
Sbjct: 396 SDRSVVPPSSINWATVNPKTFPHEFRQDPGPENALGRVAFLMPDSFSVYMHDEEQSEYPL 455

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F    R  +SGC+RV+   ++   +L      +   +++++ + K   + L   V +   
Sbjct: 456 FKRRHRDLSSGCMRVQKPREMAKLILSYQNMPNLPSVDDMINSNKHREIGLKKHVDLDVA 515

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           Y+++W   D  +  R DIYG DN     I  
Sbjct: 516 YLTSWVTPDGQLAMRPDIYGYDNPRTKPINN 546


>gi|152993088|ref|YP_001358809.1| hypothetical protein SUN_1501 [Sulfurovum sp. NBC37-1]
 gi|151424949|dbj|BAF72452.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 397

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 94/347 (27%), Positives = 151/347 (43%), Gaps = 42/347 (12%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG--DLDPS 127
            + + + Q+ + I   + I       ++   PL  GN    + R++    + G  DL   
Sbjct: 81  YTMQLLPQSRRYIELRRYIDYLYSIRDVYTPPLFRGNEVEDIMRIKAIFRLLGIADLPDD 140

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
             ++ +F      AVK +Q RHGL+  G +   T  +M  P+   IR+++ NL+ +K ++
Sbjct: 141 PYITDSF----IEAVKEYQRRHGLEVDGKIGPQTRRSMKQPISSIIRKVKKNLV-LKSIV 195

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +    YVLVNIP  ++   ENG   L   V+VG+   +TP+ H  +  I+ NP W +P
Sbjct: 196 -HEKPATYVLVNIPEFAMHYYENGWPALNMKVVVGKPKMRTPVFHRNMQYIVENPRWNVP 254

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI  K+          YL+   +   +  GK                    Q PG+ N+
Sbjct: 255 PSIYAKEYANK---SESYLRKKGL-FYNSDGK------------------LYQRPGRRNS 292

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F +R N YMHDTP   LF    R  + GC+R+     L               
Sbjct: 293 LGLVKFLFPNRFNVYMHDTPSKYLFKRYRRAYSHGCIRLEKPFALLN------------K 340

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +    +  KT  + L   +PV+  Y + W   + I+QFR DIYG + 
Sbjct: 341 LGYTYRPGKTRWITLKHTIPVYVEYHTVWVDDNGIVQFRPDIYGYER 387


>gi|46202872|ref|ZP_00052464.2| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 265

 Score =  303 bits (776), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 96/239 (40%), Positives = 152/239 (63%), Gaps = 3/239 (1%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           ++R++      +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++  +I 
Sbjct: 1   MIRLRSY-SGDLGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNTKATQIN 59

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
           FNP W +P SI++KD++  +++DP YL DN I ++   G+E+  + V+W S E   + +R
Sbjct: 60  FNPTWTVPASIVKKDLIPKMQKDPNYLTDNKIRILSG-GQEISPKSVNWFSDEGTRYTYR 118

Query: 300 QDPGKI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           QD G   N+M   +I   +    +MHDT    +F +  RF +SGCVRV+N+ +   WLLK
Sbjct: 119 QDSGADFNSMGVVRINIPNPYGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLK 178

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           DTP W R H+E+ V++ +     L+  VPV++ YI+AW+  D  +QFRDDIY  D V+V
Sbjct: 179 DTPGWDRAHVEQAVESGQRIDATLSQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNV 237


>gi|212635459|ref|YP_002311984.1| hypothetical protein swp_2663 [Shewanella piezotolerans WP3]
 gi|212556943|gb|ACJ29397.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 457

 Score =  302 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 95/373 (25%), Positives = 161/373 (43%), Gaps = 21/373 (5%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNS 107
            N RFD  L   +          S + I      I  Y+ + S   WP+L      LG  
Sbjct: 94  DNKRFDELLTFAE----------SNKQIKALRDKIRQYEQL-SNYQWPQLEASVFSLGQR 142

Query: 108 SVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           +  + +LR  L+   DL   D S      FD  +  ++K FQ RHGL  SG ++  T+  
Sbjct: 143 ATDIAKLRWVLVKLDDLEFKDISAYREAIFDPSITRSLKRFQKRHGLIQSGELNKETITL 202

Query: 165 MNVPVDLRIRQLQVNL-MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           +N      + +LQ++L  ++ K+  Q     Y+ VNIP   L    +    L   VIVG 
Sbjct: 203 LNTEPAFIVSKLQLSLKDKLSKVNYQN--SSYIEVNIPEFKLRIKGDESSTLEFPVIVGS 260

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
           +  +TP+LH+ +++I  NP W  PRSI+  +++A L++ P+ L++    ++ +       
Sbjct: 261 IKNKTPLLHTYVSKITINPTWTPPRSIVYNELLAELKKSPKSLENQKFVLVKKGNTNEVK 320

Query: 284 EEVDWNSPEPPN----FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                ++         +   Q PG  NA+   +    +    +MHDTP+   F    R  
Sbjct: 321 SLKGMDASRLKQELKVYQLVQSPGFRNALGKYRFTIPNSELIFMHDTPDKQAFKKRNRAI 380

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           + GC+R+     L  +L+    +          K   T  +KL   +P+     + W  K
Sbjct: 381 SHGCIRLSQPELLAKYLIDRENSIESIRFLSARKGVNTVDIKLRNPIPIIITNHNVWVDK 440

Query: 400 DSIIQFRDDIYGL 412
           D+++Q R  +Y  
Sbjct: 441 DNVLQVRPSVYNR 453


>gi|148825793|ref|YP_001290546.1| hypothetical protein CGSHiEE_03720 [Haemophilus influenzae PittEE]
 gi|148715953|gb|ABQ98163.1| hypothetical protein CGSHiEE_03720 [Haemophilus influenzae PittEE]
          Length = 489

 Score =  299 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 80/262 (30%), Positives = 138/262 (52%), Gaps = 12/262 (4%)

Query: 159 SSTLEAMNV----PVDLRIRQ-LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
             T++A+ +      +  I Q L +N  R++ + +   G   + VNIP+  L+   +G +
Sbjct: 217 RQTVQALPMFIPTSKESNIAQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDL 273

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVG+  R+TP+++S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  +
Sbjct: 274 ILESRVIVGKNSRRTPVMYSKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSI 333

Query: 274 IDEKGKEVFVEEVDWNSP-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           +D +G  V    +DW S      +  RQ  G  +A+ + K    S +  Y+HDTP   LF
Sbjct: 334 LDNQGNVVDPASIDWESIGNKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLF 392

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           N   R  +SGCVR+     L   LLK+   W+      V+ ++KTT   + ++ PV   Y
Sbjct: 393 NRKNRALSSGCVRIEKSDQLASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYY 451

Query: 393 ISAWSPKDSIIQFRDDIYGLDN 414
           ++AW    +I+    DIYG D 
Sbjct: 452 VTAWIENGNIVNL-PDIYGYDR 472


>gi|90578006|ref|ZP_01233817.1| hypothetical amidase [Vibrio angustum S14]
 gi|90441092|gb|EAS66272.1| hypothetical amidase [Vibrio angustum S14]
          Length = 569

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 82/326 (25%), Positives = 142/326 (43%), Gaps = 19/326 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPS------KGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+  G+   +V      L   G L             +     +  A+K F+  +GL   
Sbjct: 220 PIPYGDKVATV------LWNLGYLTQPQYQQIVAQTKITNSGVLNQAIKAFEENYGLKAD 273

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G++    +  +  P    +R   +NL R +    +  G + ++VNIP   +   +N +  
Sbjct: 274 GIIGPDVVSQLTRPYSSLVRLAALNLQRERFAQLEGDGPQ-IIVNIPDYKMTLYDNQEPV 332

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
             S +I G   R T +  S IN ++ NPYW +P +I  ++ +   + +P +L +N + +I
Sbjct: 333 FESKIIDGMPKRPTNLFQSYINTVVINPYWYVPETIKVQNTIPSAKANPNFLANNRMDVI 392

Query: 275 DEKG--KEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHD--TPE 328
           +       V    +DW +  P  F   FRQDPG  NA+           + YMHD    E
Sbjct: 393 NSWSDRSVVPPSSIDWATVNPKTFAHEFRQDPGPENALGRVAFLMPDSFSVYMHDESQSE 452

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGC+RV+    +  ++L      +   +++++ T     + L T V +
Sbjct: 453 YPLFKRRHRDLSSGCMRVQQPRKMATFILSYQNMPNLPSVDDMINTNNHREIGLNTHVNL 512

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDN 414
              Y++AW   +  +  R DIYG DN
Sbjct: 513 DVAYLTAWVTPNGQLAMRPDIYGYDN 538


>gi|165975577|ref|YP_001651170.1| hypothetical protein APJL_0122 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165875678|gb|ABY68726.1| hypothetical protein APJL_0122 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 521

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 128/243 (52%), Gaps = 8/243 (3%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR DR+TP++HS+
Sbjct: 268 KLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRDDRRTPVMHSK 324

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           ++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++    V+W      
Sbjct: 325 LSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPRSVNWAQYVNS 384

Query: 295 N---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +SGCVRV    D
Sbjct: 385 KNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSSGCVRVERSDD 444

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++ W  ++  +    DIY 
Sbjct: 445 LASILLKEA-GWSMDKKQKVLASQKTTSANIPSDNPVYVYYVAPWV-ENGKVYTLRDIYE 502

Query: 412 LDN 414
            D 
Sbjct: 503 FDA 505


>gi|296445064|ref|ZP_06887025.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296257485|gb|EFH04551.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 518

 Score =  299 bits (765), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 21/254 (8%)

Query: 170 DLRIRQ-LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           D R+R  +  N+ R +  + + +G   + VNIP   L  + +G+V  R+ VIVG+    T
Sbjct: 283 DTRLRAEIIANMERWR-WMPRDLGENRIEVNIPDFELAVIRDGEVTHRARVIVGKEGTPT 341

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P+  + +  I+ NPYW +P SI+ K+M+     D Q +      ++   G          
Sbjct: 342 PVFSNAMQFIIVNPYWNVPPSILNKEMLPKFGGDLQAIAARGYEVVYRNGHA-------- 393

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                     RQ PG+ NA+   K  F +  + Y+HDTP   LF +  R  + GCVRV  
Sbjct: 394 --------RVRQRPGEGNALGRIKFMFPNDFSVYLHDTPSRALFASTHRAFSHGCVRVDQ 445

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
                  +L     W    ++ ++   +   + LA  +P+H  Y +A+  +   +Q R D
Sbjct: 446 PFRFAEAVLG--SGWREERVKRLIGD-QERYINLARPLPIHIEYFTAYVDESGRLQLRGD 502

Query: 409 IYGLDNVHVGIIPL 422
           +YG        + L
Sbjct: 503 LYGYSAKVRAALGL 516


>gi|146329173|ref|YP_001209233.1| lipoprotein [Dichelobacter nodosus VCS1703A]
 gi|146232643|gb|ABQ13621.1| conserved hypothetical lipoprotein [Dichelobacter nodosus VCS1703A]
          Length = 505

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 72/244 (29%), Positives = 123/244 (50%), Gaps = 5/244 (2%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L +N+ R++  + Q  G +YV+ NIPA ++E   + +    +  +VGR DR TP   ++I
Sbjct: 260 LIINMERLR-WMPQDWGEQYVITNIPAFNVEMYRDERKIYETRAVVGRADRATPRFINKI 318

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
             ++ NP W +P +I+++D +  L+ +P     +    +   GK      V W+  E   
Sbjct: 319 QHVVINPTWTVPPTIMRQDKLPKLKNNPAAFDAS-YEAVSASGKIAKPSSVSWS--EGNG 375

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +  RQ  G+ NA+   K  F +++  YMHDTP   LF    R  +SGC+R++  ++L   
Sbjct: 376 YSLRQKSGQYNALGRVKFLFPNKHAIYMHDTPTRHLFKQNNRARSSGCIRLQKPLELAEI 435

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           LL D   W+   I+  +   K   V    E PV+ VY + +   ++ I+   D+YGLD  
Sbjct: 436 LLADN-GWNAQKIQASIAKEKQQWVNPVKETPVYLVYWTTYVDANNTIKTTPDVYGLDKK 494

Query: 416 HVGI 419
            +  
Sbjct: 495 LIRA 498


>gi|229845074|ref|ZP_04465210.1| hypothetical protein CGSHi6P18H1_00944 [Haemophilus influenzae
           6P18H1]
 gi|229812046|gb|EEP47739.1| hypothetical protein CGSHi6P18H1_00944 [Haemophilus influenzae
           6P18H1]
          Length = 489

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 131/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG+  R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGKNSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNHGLFNRKNRALSSGCVRIEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|145639176|ref|ZP_01794783.1| hypothetical protein CGSHiII_04039 [Haemophilus influenzae PittII]
 gi|145271738|gb|EDK11648.1| hypothetical protein CGSHiII_04039 [Haemophilus influenzae PittII]
          Length = 489

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 131/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG+  R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGKNSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNHGLFNRKNRALSSGCVRIEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|323497656|ref|ZP_08102673.1| hypothetical protein VISI1226_22555 [Vibrio sinaloensis DSM 21326]
 gi|323317405|gb|EGA70399.1| hypothetical protein VISI1226_22555 [Vibrio sinaloensis DSM 21326]
          Length = 469

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 83/331 (25%), Positives = 149/331 (45%), Gaps = 16/331 (4%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP 95
           L+  +     ++ N +    +            +I  +T     K     Q I      P
Sbjct: 132 LESAVFALKRAVTNHQMAELIEAYTPDSSEYQQLI--DTYLHIVK--FQKQRIA-----P 182

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-FDAYVESAVKLFQMRHGLDPS 154
                 +  G+  V    L  RL +          + A +D  +  A+K FQ  HGL+P 
Sbjct: 183 VAERGVIRPGDKLVDKAVLLARLEVVDVDLTDVDRTAAFYDKSLVPAIKQFQQLHGLNPD 242

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G++   TL+ +N+ +  R+  L +N  R++    +      ++VN+P+  +    +GK  
Sbjct: 243 GIIGPQTLKWLNLSLSSRLSTLALNAERVRYWPSE--HDSIIVVNVPSYEMTYWHDGKAV 300

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
             S V+VGR  R TP++ + ++ ++ NP W +P +I+ +D++  +++DP+Y+   +I ++
Sbjct: 301 FESKVVVGRKARPTPLMVTNLDTLILNPTWNVPWTIMVEDIIPKIQKDPEYITKQHIEIL 360

Query: 275 DEKGK--EVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
            + G    +   E+DW S  P  F +R  Q  G  NA+   K    +    Y+HDTP   
Sbjct: 361 PKWGSKERIDPLEIDWESLNPKAFPYRMTQMSGSRNALGLYKFNTPNNRAIYLHDTPSKG 420

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           LF+   R  +SGC+RV N       LL+   
Sbjct: 421 LFSQPKRAFSSGCIRVENADVFASRLLEVQG 451


>gi|319896895|ref|YP_004135090.1| hypothetical protein HIBPF05750 [Haemophilus influenzae F3031]
 gi|317432399|emb|CBY80754.1| conserved hypothetical protein [Haemophilus influenzae F3031]
          Length = 489

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 353 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|301170424|emb|CBW30030.1| conserved hypothetical protein [Haemophilus influenzae 10810]
          Length = 487

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 234 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMY 290

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 291 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 350

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 351 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 409

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG
Sbjct: 410 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYG 467

Query: 412 LDN 414
            D 
Sbjct: 468 YDR 470


>gi|309972939|gb|ADO96140.1| Putative murein L,D-transpeptidase [Haemophilus influenzae R2846]
          Length = 489

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 353 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|68250268|ref|YP_249380.1| hypothetical protein NTHI1968 [Haemophilus influenzae 86-028NP]
 gi|148827093|ref|YP_001291846.1| hypothetical protein CGSHiGG_02060 [Haemophilus influenzae PittGG]
 gi|319776086|ref|YP_004138574.1| hypothetical protein HICON_14350 [Haemophilus influenzae F3047]
 gi|68058467|gb|AAX88720.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|148718335|gb|ABQ99462.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae PittGG]
 gi|309750756|gb|ADO80740.1| Putative murein L,D-transpeptidase [Haemophilus influenzae R2866]
 gi|317450677|emb|CBY86897.1| conserved hypothetical protein [Haemophilus influenzae F3047]
          Length = 489

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 353 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|329123250|ref|ZP_08251818.1| hypothetical protein HMPREF9095_1036 [Haemophilus aegyptius ATCC
           11116]
 gi|327471459|gb|EGF16907.1| hypothetical protein HMPREF9095_1036 [Haemophilus aegyptius ATCC
           11116]
          Length = 487

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 234 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 290

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 291 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 350

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 351 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 409

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG
Sbjct: 410 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYG 467

Query: 412 LDN 414
            D 
Sbjct: 468 YDR 470


>gi|16273554|ref|NP_439809.1| hypothetical protein HI1667 [Haemophilus influenzae Rd KW20]
 gi|260581261|ref|ZP_05849079.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1176067|sp|P44285|Y1667_HAEIN RecName: Full=Putative L,D-transpeptidase HI_1667
 gi|1574515|gb|AAC23312.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260092088|gb|EEW76033.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 489

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 77/242 (31%), Positives = 131/242 (54%), Gaps = 7/242 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S + 
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIDN 353

Query: 294 P-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     L
Sbjct: 354 KFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYGY 470

Query: 413 DN 414
           D 
Sbjct: 471 DR 472


>gi|145631483|ref|ZP_01787252.1| hypothetical protein CGSHi22421_02471 [Haemophilus influenzae
           R3021]
 gi|144982913|gb|EDJ90426.1| hypothetical protein CGSHi22421_02471 [Haemophilus influenzae
           R3021]
          Length = 489

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNHGLFNRKNRALSSGCVRIEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|89076172|ref|ZP_01162529.1| hypothetical amidase [Photobacterium sp. SKA34]
 gi|89048122|gb|EAR53707.1| hypothetical amidase [Photobacterium sp. SKA34]
          Length = 569

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 85/332 (25%), Positives = 145/332 (43%), Gaps = 19/332 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE------SAVKLFQMRHGLDPS 154
           P+  G+   +V      L   G L   +   +   A +        A++ F+  +GL   
Sbjct: 220 PIPYGDKVATV------LWNLGYLTQPQYQQIVAQAKITNSGVINQAIQAFEGNYGLKMD 273

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G++    +  +  P     R   +NL R +    +  G + ++VNIP   +   +N K  
Sbjct: 274 GIIGPDVMRQLTRPYSSLARIAALNLQRERFAQLEGDGPQ-IIVNIPDYKMTLYDNQKPI 332

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
             S +I G   R T +  S IN ++ NPYW +P +I  ++ +   + +P +L +N + +I
Sbjct: 333 FESKIIDGIPKRPTNLFQSYINTVVINPYWYVPETIKVQNTIPSAKANPNFLANNRMDVI 392

Query: 275 DEKG--KEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHD--TPE 328
           +       V    +DW +  P  F   FRQDPG  NA+           + YMHD    E
Sbjct: 393 NSWSDRSVVPPSSIDWATVNPKTFSHEFRQDPGPENALGRVAFLMPDSFSVYMHDESQSE 452

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGC+RV+    +   +L      +   + +++ T K   + L T V +
Sbjct: 453 YPLFKRRHRDLSSGCMRVQQPRKMATLILSYQNMPTLPSVNDMINTNKHREIGLNTHVNL 512

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
              Y++AW  ++  +  R DIYG DN    +I
Sbjct: 513 DVAYLTAWVTQNGQLAMRPDIYGYDNPGAKLI 544


>gi|145633343|ref|ZP_01789074.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 3655]
 gi|145634471|ref|ZP_01790181.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittAA]
 gi|144986189|gb|EDJ92779.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 3655]
 gi|145268451|gb|EDK08445.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittAA]
          Length = 489

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSEQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|229846898|ref|ZP_04467005.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae 7P49H1]
 gi|229810387|gb|EEP46106.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae 7P49H1]
          Length = 489

 Score =  296 bits (758), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 80/262 (30%), Positives = 137/262 (52%), Gaps = 12/262 (4%)

Query: 159 SSTLEAMNV----PVDLRIRQ-LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
             T++A+ +      +  I Q L +N  R++ + +   G   + VNIP+  L+   +G +
Sbjct: 217 RQTVQALPMFIPTSKESNIAQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDL 273

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVG   R+TP+++S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  +
Sbjct: 274 ILESRVIVGTDSRRTPVMYSKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSI 333

Query: 274 IDEKGKEVFVEEVDWNSP-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           +D +G  V    +DW S      +  RQ  G  +A+ + K    S +  Y+HDTP   LF
Sbjct: 334 LDNQGNVVDPASIDWESIGNKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLF 392

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           N   R  +SGCVR+     L   LLK+   W+      V+ ++KTT   + ++ PV   Y
Sbjct: 393 NRKNRALSSGCVRIEKSEQLASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYY 451

Query: 393 ISAWSPKDSIIQFRDDIYGLDN 414
           ++AW    +I+    DIYG D 
Sbjct: 452 VTAWIENGNIVNL-PDIYGYDR 472


>gi|255623270|ref|XP_002540350.1| conserved hypothetical protein [Ricinus communis]
 gi|223496506|gb|EEF22033.1| conserved hypothetical protein [Ricinus communis]
          Length = 249

 Score =  295 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 80  KAIAFYQDILSRGGWPELPIRP-LHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           K +  Y+D+ ++GGW  +P  P L LG+     + +L  RL I  D   +   +  FD  
Sbjct: 1   KGLVVYRDLAAKGGWALIPEGPPLKLGDKGDPRITQLEARLAIE-DPTIAVDKAPVFDEA 59

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           ++ A+   Q R GL+P G++   TL A+NVPV LRI Q+  N+ R +  L +++    + 
Sbjct: 60  LQQALMRAQKRFGLNPDGVLGKGTLAALNVPVQLRIDQIVANMERWR-WLPEELPADRIQ 118

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNI AA +    +    L    + GR   +TP+L S+I+ I+ NP W +P SI  K++  
Sbjct: 119 VNIAAAVMSVFHHDAPTLTMRAVTGRPGDETPMLQSQIHSIVLNPPWNVPSSIATKELWP 178

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
             R +P YL  N+  +I  +G                    +Q  G   A+   K +F +
Sbjct: 179 KERANPGYLARNDFIVIPTEGGGT---------------RLQQKAGDKAALGLVKFDFNN 223

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGC 343
               Y+HDTP    F +  R  + GC
Sbjct: 224 PYGVYLHDTPSRAKFASYSRLASHGC 249


>gi|260582628|ref|ZP_05850417.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae NT127]
 gi|260094300|gb|EEW78199.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae NT127]
          Length = 489

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 129/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 353 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW    +I+    DIY 
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWIENGNIVNL-PDIYD 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|42522163|ref|NP_967543.1| putative periplamic protein [Bdellovibrio bacteriovorus HD100]
 gi|39574694|emb|CAE78536.1| putative periplamic protein [Bdellovibrio bacteriovorus HD100]
          Length = 505

 Score =  295 bits (756), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 95/384 (24%), Positives = 171/384 (44%), Gaps = 27/384 (7%)

Query: 51  RFDNFLARVDMGIDSDIPIISKE--TIAQTEKAIAFYQDILSRGGWPELPI--RPLHLGN 106
             +  LA      +  +  +S +         ++    +      WP LP   + L LG+
Sbjct: 115 ELETALAAAGQNPNVLLESMSPQSPQYLALRDSLRKLNNACVNNLWPALPKVKKTLKLGS 174

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV--DSSTLEA 164
               +  L+ R+   G   P   L   FD  V +AV   Q      P   +     T + 
Sbjct: 175 KDAILIPLKTRMTQLGY--PMTSLDNVFDDKVVAAVNDIQWNLRFKPDSKISPGGKTWKY 232

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE---NGKVGLRSTVIV 221
           +NV    R+RQ+++++ +++    Q    RY+ +N+  +    V+    G   +    I 
Sbjct: 233 LNVSCQDRMRQIRLDMEKLR-WFPQHFEDRYIFINLAMSYFSLVDKSGGGFYSMSFRTIN 291

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ-----DPQYLKDNNIHMIDE 276
           GR +R++P +  +I  I+ NP+WV+P +I ++D +  ++        +Y    +  + ++
Sbjct: 292 GRPERKSPTMKDKIVYIVINPFWVVPPTIFREDKVEEIKNLWPWEIREYFDTRHYQVWNK 351

Query: 277 K-GKEVFVEEVDWNSPEPP---NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
              +      +DW + +P    N   RQ P ++NA+ S K    +    Y+HDT +  LF
Sbjct: 352 SFTQRFDPASIDWYNMDPNQDANIYIRQSPHRMNALGSLKFMMTNSYAIYLHDTNQRELF 411

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR-----KTTPVKLATEVP 387
               R  +SGCVRV   +DL  +LLK T  W R  IE  +        K T V+L  ++P
Sbjct: 412 AEPHRLLSSGCVRVEKPVDLAEYLLKGT-EWDRAAIERYMAKPGEVLDKDTKVQLKQQMP 470

Query: 388 VHFVYISAWSPKDSIIQFRDDIYG 411
           V+ V++++    D I++F +D Y 
Sbjct: 471 VYMVFLTSQLSSDGILRFAEDSYR 494


>gi|325104437|ref|YP_004274091.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
 gi|324973285|gb|ADY52269.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
          Length = 493

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 12/290 (4%)

Query: 151 LDPSGMVDSSTLEAMNVPVD-LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           L P   V ++    M   +   +  ++ +NL R++  +      +++LVNIP   L   +
Sbjct: 205 LQPKNAVYTALQAEMQKGLSGDQKERIFLNLERLRWKIS-DFPEKFILVNIPEFKLRLYD 263

Query: 210 NGKVGLRSTVIVGRV----------DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           N K  L   V VG            + +TP+L   I+R+  NP W IP+SI  K++M  L
Sbjct: 264 NHKEALAMKVCVGATANPPYSKNGQNHETPVLSGTIDRMQINPVWNIPKSIAGKEIMTKL 323

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
            ++P YL ++N+   D+ G  V  + VDW+S    ++ F+Q+PG  N++   K  FY+  
Sbjct: 324 VENPSYLDESNMVAYDKSGAAVNAQSVDWSSASVDDYSFKQNPGSDNSLGRVKFIFYNPY 383

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             Y+HDTP   +FN   R  + GCVRV   + L  +LL D     +   E      ++  
Sbjct: 384 AIYLHDTPAKQMFNEKNRAVSHGCVRVEQPLKLVDFLLNDQKESEKVKSEITGSDNESRW 443

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPID 429
           VK+   V V+  Y +A++     I + DD+YG D      +       I+
Sbjct: 444 VKVKDPVKVYLAYYTAFADDKDGITWVDDVYGYDPKLKAALENYLPQTIN 493


>gi|255530583|ref|YP_003090955.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
 gi|255343567|gb|ACU02893.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
          Length = 471

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 87/301 (28%), Positives = 145/301 (48%), Gaps = 18/301 (5%)

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           + G LD  +  S  +   +++A+K  Q               ++A    +      L++N
Sbjct: 187 LKGYLDSIQPKSGQY-LALQAALKA-Q---------------VQAQEKTISQTGELLKLN 229

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           L R++    +  GL+YV VNI   SL+ ++ GK+ LR  V VG   RQTP L S I  + 
Sbjct: 230 LERLR-WKNRPPGLKYVRVNIADFSLDVIDKGKLVLRMKVCVGEAARQTPQLSSMIYSVQ 288

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W IP SI + +++    +D  YL +N+I++     +   +E +DW   EP ++ F+
Sbjct: 289 VNPVWNIPESIARNEIIKYASRDKYYLANNSINVFKNGKRVWDLEAIDWGKAEPGSYSFK 348

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K  F + ++ Y+HDTP    FN   R  + GCVRV   ++L   L   
Sbjct: 349 QRPGMKNSLGKIKFLFKNESSVYLHDTPVKSAFNQKNRAISHGCVRVEKPLELAFVLFGK 408

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
            P + +          +   + L T +P+   Y +A + +   + F  DIYGLD++    
Sbjct: 409 GPKYDQVKNAMQSGYPREKYIGLPTAIPISIAYYTALADQQGKVIFNKDIYGLDDMLAEE 468

Query: 420 I 420
           +
Sbjct: 469 L 469


>gi|300773386|ref|ZP_07083255.1| peptidoglycan-binding domain 1 protein [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300759557|gb|EFK56384.1| peptidoglycan-binding domain 1 protein [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 488

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 14/258 (5%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV----------- 224
           + + L +++  + +    +YV+VNIP   L  V+N K      V VG             
Sbjct: 226 ICLTLEKLR-WMGKDFPEKYVVVNIPEQKLRMVDNRKTKDVMNVCVGETIYGPYARRAGA 284

Query: 225 --DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
             + +TP+L   ++R+  NP W IP SI++K++++ LR +P YL+  N+   ++KG+ V 
Sbjct: 285 TDNHETPVLSGELDRMQVNPVWNIPVSIVKKELISSLRSNPNYLESRNMVAYNKKGQMVD 344

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
              VDW+S    NF F+Q+PG  N++ + K  F +  + Y+HDTP   +F+   R  + G
Sbjct: 345 PNTVDWSSDSVLNFKFKQNPGADNSLGNIKFIFSNPYSIYLHDTPAKQMFSAKNRAVSHG 404

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           CVRV     L  +L+ D     +   E      K+  V +   +PV+  Y + W   D  
Sbjct: 405 CVRVERPAALAAFLVNDDKKAEQIATEIADTLNKSRWVMMKKTIPVYITYYTTWVDDDGK 464

Query: 403 IQFRDDIYGLDNVHVGII 420
           +    DIYG D      +
Sbjct: 465 LYRLPDIYGYDERLKKAM 482


>gi|113461215|ref|YP_719284.1| hypothetical protein HS_1072 [Haemophilus somnus 129PT]
 gi|112823258|gb|ABI25347.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 475

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 75/244 (30%), Positives = 132/244 (54%), Gaps = 7/244 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L +N  R++ + +   G   + VNIP+  L    +GK+ L S VIVG+  R+TP+++
Sbjct: 222 LYKLAINAQRLRIIPDFNNG---IFVNIPSYQLNYYRDGKLVLNSKVIVGKKARKTPVMY 278

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ I+ NP W+    +I +D++  ++ DP Y+  N+  + D KG+ +    +DWN+  
Sbjct: 279 SKLSNIVVNPPWIPTPRLINEDIVPKIKLDPDYVARNSYTISDSKGQVIDPSSIDWNTIG 338

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ PG  +A+ + K    S +  Y+HDTP   LF+   R  +SGCVRV     
Sbjct: 339 TNFPYRIRQAPG-GSALGNYKFNMPSSDAIYLHDTPNRGLFSKKNRALSSGCVRVEKSDQ 397

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL +   W+    + V+ ++K T   + ++ PV+  Y++ W   D +++   DIY 
Sbjct: 398 LATILLTEA-GWTEERKQNVLNSKKNTSENIRSDNPVYLYYVTTWVEND-VVKTLPDIYE 455

Query: 412 LDNV 415
            D V
Sbjct: 456 YDQV 459


>gi|170717815|ref|YP_001784877.1| hypothetical protein HSM_1557 [Haemophilus somnus 2336]
 gi|168825944|gb|ACA31315.1| conserved hypothetical protein [Haemophilus somnus 2336]
          Length = 475

 Score =  289 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 73/244 (29%), Positives = 132/244 (54%), Gaps = 7/244 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L +N  R++ + +   G   + VNIP+  L    +G++ L S VIVG+  R+TP+++
Sbjct: 222 LYKLAINAQRLRIIPDFNNG---IFVNIPSYQLNYYRDGELVLNSKVIVGKKARKTPVMY 278

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ I+ NP W+    +I +D++  ++ DP Y+  N+  + D KG+ +    ++WN+  
Sbjct: 279 SKLSNIVVNPPWIPTPRLINEDIVPKIKLDPDYVARNSYTISDSKGQVIDPSSINWNTIG 338

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ PG  +A+ + K    S +  Y+HDTP   LF+   R  +SGCVRV     
Sbjct: 339 TNFPYRIRQAPG-GSALGNYKFNMPSSDAIYLHDTPNRGLFSKKNRALSSGCVRVEKSDQ 397

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL +   W+    + V+ ++K T   + ++ PV+  Y++ W   D +++   DIY 
Sbjct: 398 LATILLTEA-GWTEERKQNVLNSKKNTSENIRSDNPVYLYYVTTWVEND-VVKTLPDIYE 455

Query: 412 LDNV 415
            D V
Sbjct: 456 YDQV 459


>gi|323137795|ref|ZP_08072871.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322397092|gb|EFX99617.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 495

 Score =  289 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 20/258 (7%)

Query: 157 VDSS-TLEAMNVPVDLRIRQ-LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           +    +  ++      RI   +  N+ R +    + +G   + VNIP   L    +G   
Sbjct: 244 IGPQNSFASLTQGEAKRIEAEIIANMERWR-WEPRDLGATRIEVNIPQFELALTRDGVKT 302

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
            R+ V+VG+    TP+    +  ++ NP W +P+SII K+M      D  YL      + 
Sbjct: 303 HRTRVVVGKTSTPTPVFSDTMRYVVINPSWSVPQSIITKEMAGKHGGDLSYLAARGFKVS 362

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
              G+                   RQ PG+ NA+   K  F +  + Y+HDTP   LF  
Sbjct: 363 YSNGRA----------------SVRQPPGEKNALGRVKFVFPNEFSVYLHDTPSRSLFAT 406

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
             R  + GCVRV     L   +L     W+   +   +       + LA  +PVH  Y +
Sbjct: 407 ARRAYSHGCVRVDQPFALAEAVLTADAGWTEKRL-RGMVGASERRIDLARPMPVHIEYFT 465

Query: 395 AWSPKDSIIQFRDDIYGL 412
           A    D  ++  DDIYG 
Sbjct: 466 ATVDADGQLRLFDDIYGY 483


>gi|256423860|ref|YP_003124513.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256038768|gb|ACU62312.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 478

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 167/374 (44%), Gaps = 22/374 (5%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
            Y ++ N+ F+  L +V+          S       +  IAFY D L R  +  +    +
Sbjct: 117 LYSALANNNFNKLLEKVEP---------SAPQYNALKSMIAFYNDRLQRQDYHPV---KI 164

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
               +  S   L ++L   G LD       A +  +   ++  +        G +    +
Sbjct: 165 TSETADSSNHPLIDKLYQLGFLDAPDY--TAHEDTLRIKIRAAEYMFEFLEDGALRQGVI 222

Query: 163 EAMNVPVDLRIRQL--QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           E +NV ++ R+ +L   +N  R    L +      V+V+IPAA L         L S VI
Sbjct: 223 EELNVSLEKRLSELKHAINTFRWLNCLRKY--QYVVVVDIPAAELFVYLGDSTMLNSRVI 280

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ-YLKDNNIHMIDEKGK 279
           VG+    +  L SRI+ ++  PYW +P +I  K+++  ++  P  YL+  N  ++D+ G+
Sbjct: 281 VGKAKTPSSPLASRIDEVILFPYWTVPHNIAVKELLPGIKGAPSIYLEAGNYQVLDKSGR 340

Query: 280 EVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +  + ++WN+    NF +  RQ  G  N++   K+ F++  +TY+HDTP    F    R
Sbjct: 341 ILDPQSINWNTLNKHNFPYTLRQMFGCDNSLGIIKLNFFNPYSTYLHDTPARSYFMFNSR 400

Query: 338 FETSGCVRVRNIIDLDVWLL-KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           + + GC+RV + I L   L+  + P        +         + +   +PV  +Y  AW
Sbjct: 401 YFSHGCIRVEDAIPLAKLLVPAEAPRIDSLSRMKTPPAGSPITIPMKPGIPVIILYEVAW 460

Query: 397 SPKDSIIQFRDDIY 410
              +  ++F +D+Y
Sbjct: 461 PDANGKVRFFEDVY 474


>gi|289804603|ref|ZP_06535232.1| hypothetical protein Salmonellaentericaenterica_09007 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 443

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 91/370 (24%), Positives = 145/370 (39%), Gaps = 80/370 (21%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 100 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 146

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 147 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDV 195

Query: 112 QRLRERLIISGDLD-----------------------------------------PSKGL 130
             LRE L  +G LD                                              
Sbjct: 196 PALREILQRTGMLDGGPKIALPGDNTSDSAVVSPSAVVDETSVAQPVDEPTARRSKPAPA 255

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  + 
Sbjct: 256 ARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL 315

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++
Sbjct: 316 --STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTL 373

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKIN 306
            +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  N
Sbjct: 374 ARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHN 433

Query: 307 AMASTKIEFY 316
           ++   K    
Sbjct: 434 SLGRYKFNMP 443


>gi|149277939|ref|ZP_01884078.1| putative periplasmic protein [Pedobacter sp. BAL39]
 gi|149231137|gb|EDM36517.1| putative periplasmic protein [Pedobacter sp. BAL39]
          Length = 501

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 90/325 (27%), Positives = 142/325 (43%), Gaps = 43/325 (13%)

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
            LD  +     +   ++ A++           G +       MN     R+  L+ NL R
Sbjct: 188 YLDSIQPKDPQY-LALQEALRQ----------GAMGQG----MNKEESSRV--LKANLER 230

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG-------------------- 222
           ++    +    +YVLVNI   +L+ V+N K  L+  V VG                    
Sbjct: 231 LR-WKNKPTQQKYVLVNIADFTLDVVDNNKSVLKMKVCVGEGRNENFKDRVLKEYDETGL 289

Query: 223 RVDRQ----TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           + DR     TP L+S I+ +  NP W IP SI  K++     +D  YL +NNI + +   
Sbjct: 290 KKDRPFSRETPQLNSMIHSVQVNPVWNIPESIATKEISRYAAKDRFYLSNNNIDVFENGK 349

Query: 279 KEVFVEEVDWNSPEPP-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           +    E +D+++ +    + F+Q PG  N++   K  F +  + Y+HDTP    F+  VR
Sbjct: 350 RIEDPETIDFSAGDAGSRYTFKQRPGNDNSLGKIKFLFKNDESVYLHDTPAKAAFDLPVR 409

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             + GCVRV    +L   L  D   +     E   K      + L+ +VPV+  Y +AW 
Sbjct: 410 AVSHGCVRVEKPSELAKALFGDGQKYQTIQKEMQSKQPVAKDISLSPQVPVYLTYFTAWK 469

Query: 398 PKDSIIQFRDDIYGLDNVHVGIIPL 422
            +   +QFR DIYGLD V    +  
Sbjct: 470 DEQGNMQFRKDIYGLDIVLDSYLQR 494


>gi|227536728|ref|ZP_03966777.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243420|gb|EEI93435.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 488

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 74/258 (28%), Positives = 125/258 (48%), Gaps = 14/258 (5%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV----------- 224
           + + L +++    +    +Y++VNIP   L  V+N K      V VG             
Sbjct: 226 IYLTLEKLR-WRGKDFPEKYIIVNIPEQKLRMVDNRKTKEVMNVCVGETIYGPYARRAGA 284

Query: 225 --DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
             + +TP+L   ++R+  NP W IP SI++K++++ LR +P YL+  N+   ++KG+ V 
Sbjct: 285 TDNHETPVLSGELDRMQVNPVWNIPASIVKKELISSLRSNPNYLESRNMVAYNKKGQMVD 344

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
              VDW+S    NF F+Q+PG  N++ + K  F +  + Y+HDTP   +F+   R  + G
Sbjct: 345 PNTVDWSSDSVLNFKFKQNPGADNSLGNIKFIFSNPYSIYLHDTPAKQMFSAKNRAVSHG 404

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           CVRV     L  +L+ D     +   E      K+  V +   +PV+  Y + W   +  
Sbjct: 405 CVRVEKPAALAAFLVNDEKKAEQIATEIADTLNKSRWVMMKKTIPVYITYYTTWVDDEGK 464

Query: 403 IQFRDDIYGLDNVHVGII 420
           +    DIYG D      +
Sbjct: 465 LYKLPDIYGYDERLKKAM 482


>gi|152992423|ref|YP_001358144.1| hypothetical protein SUN_0829 [Sulfurovum sp. NBC37-1]
 gi|151424284|dbj|BAF71787.1| hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 405

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 134/264 (50%), Gaps = 11/264 (4%)

Query: 163 EAMNVPVDLR---IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           +A+          +R++++++ RIK L++  +G  YVLVNIP   +  +EN K  +   V
Sbjct: 139 KALQRTPGASPQALRKVRMSIERIK-LMKPGLGKTYVLVNIPEFRVRVIENDKTSIAMGV 197

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM---IDE 276
           I G+ D QTPI    +  I+ NP W +P SI + +++  L +DP YLK + + M    + 
Sbjct: 198 ITGKKDHQTPIFSENLQYIVLNPTWNVPDSIARNEVIPKLLKDPGYLKKHRLVMRRDYNL 257

Query: 277 KGKEVFVEEVDWNSPEPPN----FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
               +    V+  + +       F F + P   NA+   K  F + ++ YMHDTP   LF
Sbjct: 258 DSPALSPGSVNLRAYKGGKGDVPFKFIEVPSDKNALGRVKFIFPNHHSVYMHDTPTKYLF 317

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
              VR  + GCVR++N   +  +L +    +S     E   + KT  +K+   +PVH  Y
Sbjct: 318 KRNVRAYSHGCVRLQNPKLMLKYLTEHYTNYSFEEAMEKYNSYKTQYMKIIKPLPVHTAY 377

Query: 393 ISAWSPKDSIIQFRDDIYGLDNVH 416
           ++A+  +D  ++   DIYGLD + 
Sbjct: 378 LTAYVEEDGTLKVFPDIYGLDAMQ 401


>gi|319957191|ref|YP_004168454.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
           16511]
 gi|319419595|gb|ADV46705.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
           16511]
          Length = 423

 Score =  285 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 16/261 (6%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           + + R+++++L R K +         Y LVNIP   +   ENG++   S V+VG+   QT
Sbjct: 159 EAQRRKVRLSLERSKLMDPDPTHWQTYFLVNIPEFRVRFFENGRLAFVSDVVVGKKSWQT 218

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEE 285
           PI  + +  ++ NP W +P +I + + +  L +DP Y K   + ++         V    
Sbjct: 219 PIFSAAMKYVVLNPTWNVPDNIARAEEIPHLLRDPNYFKHKRMIVLRSYDLDTTPVNPRS 278

Query: 286 VDWNSPEPP-------NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           V W     P        +   Q P K NA+   K  F + N+ YMHDTP   LF   +R 
Sbjct: 279 VPWRKYLRPEWKKKDLPYKLIQLPAKGNALGRVKFLFPNGNSVYMHDTPAKSLFKRKIRA 338

Query: 339 ETSGCVRVRNIIDLDVWLLKD---TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            + GC+R+   I++  +L +    +  W++  +EE +K+ K   V L   +PVH  Y +A
Sbjct: 339 YSHGCIRLARPIEMLRYLAQHGYLSKDWTQ--VEEELKSWKRHNVSLKEPIPVHVGYFTA 396

Query: 396 WSPKDSIIQFRDDIYGLDNVH 416
           +  +   +QF  DIYG D + 
Sbjct: 397 YVSQGGGVQFFPDIYGYDQIM 417


>gi|308050064|ref|YP_003913630.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
 gi|307632254|gb|ADN76556.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
          Length = 459

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 160/364 (43%), Gaps = 7/364 (1%)

Query: 55  FLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQ 112
             A     +D  I  ++ E    A+   A+   + I         P++ L LG S   + 
Sbjct: 94  MAAEQQGQLDRLIANLTPEYRGFARLRSALVRERQIERVPIPGLAPLQSLGLGQSHPDLA 153

Query: 113 RLRERLII-SGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           +LR  L I  G+ L P+      +D    + +K +Q  +GL  +G +DS+T   +     
Sbjct: 154 QLRRALAIRLGEALPPTLQDRPVWDPPFTALLKQYQDSNGLSATGRLDSATRRHLGSVGQ 213

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            RI  +Q +L +  +L ++  G   +LVNIP   L  + +  V L   VIVG     TP 
Sbjct: 214 DRIAAIQYSLRQWYQLPDRIEGYA-MLVNIPRYELLVLNDEAVELAVPVIVGSPANPTPK 272

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
           ++S  + +  NP W  P SI++ +++   RQDP  L       + +    +   +V   +
Sbjct: 273 MNSYFSSVTLNPSWTPPMSIVRNELLPGYRQDPTTLHRQGFEWVGKGQSRLPWTQVTPEN 332

Query: 291 PEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +  RQ PG+ N +   +         Y+HDT  P LF    R  + GCVRV  
Sbjct: 333 VNNVLGRYQLRQKPGRNNPLGKVRFNLAQSRAIYLHDTNNPRLFRQSQRALSHGCVRVAE 392

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
              +  +LL +  +  +  + + ++   +   ++ + V V+ VY+ AW   D+ +   DD
Sbjct: 393 YQRVLDYLLANESSGRQRQVAQALQQHDSVTARVGSRVAVYLVYMPAWVGPDNRLHLVDD 452

Query: 409 IYGL 412
           +YG 
Sbjct: 453 VYGW 456


>gi|300024880|ref|YP_003757491.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526701|gb|ADJ25170.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 557

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 65/250 (26%), Positives = 125/250 (50%), Gaps = 2/250 (0%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L+ N+   +  +   MG  YVL NIP       ++G++   + ++ G VD+++ I  
Sbjct: 251 AKRLRANMEMWR-WMWPDMGDFYVLNNIPEFMQYVYKDGEIIRSAKIVAGEVDKKSTIFS 309

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
             +  ++  P W +P SI+  ++   L +    ++   + +  + G+ V   + DW+S +
Sbjct: 310 RPLKYVVLRPAWRVPESIMVNELWPSLIRGGGLMRQYGLQLQTKDGRRVDWRQYDWSSTD 369

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
             NFI  Q PG  + +   K  F S++  +MHDTP+  +F    R  + GC+RV+N + L
Sbjct: 370 IRNFIVLQPPGPKSVLGRVKFSFPSQHTIFMHDTPDKWMFRPAQRTLSHGCLRVQNPMQL 429

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRK-TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
              +LK+   W    I E+ ++      V ++ E+P+H VY +AW   D  ++  +D+YG
Sbjct: 430 AEMVLKEDKGWDAAKIAELDRSGPLNNEVPISKEIPIHLVYFTAWVTDDGKLKTFNDVYG 489

Query: 412 LDNVHVGIIP 421
            +      + 
Sbjct: 490 HEKRVTLALD 499


>gi|323136049|ref|ZP_08071132.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322399140|gb|EFY01659.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 537

 Score =  282 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 81/311 (26%), Positives = 125/311 (40%), Gaps = 29/311 (9%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           Q+LRE+L    +L   +   +A    V SA +  Q      P          A       
Sbjct: 254 QQLREKLA---ELHSQRAAGLAGAERVASAEEGLQTDADPPPLKSRKRRAASAGGGSTSA 310

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
              ++  N+ R +  L + +G   + VNIP   L  V  G V  R+ VIVG+    TPI 
Sbjct: 311 LEAEIVANMERWR-WLPRDLGDERIEVNIPDFELAVVRGGMVTHRTRVIVGKEQTPTPIF 369

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
              +  I+ NP W +P+SIIQK+    +             +    G+ V          
Sbjct: 370 SDEMVEIIVNPSWYVPQSIIQKEWHGGVGA--------GYQVSYRNGQMV---------- 411

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
                  RQ PG+ NA+   K  F +    YMHDTP   LF    R  + GC+RV +   
Sbjct: 412 ------VRQPPGEKNALGRIKFVFPNDFAVYMHDTPSRGLFAASHRAFSHGCMRVDDPFA 465

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   +L     WS   +++++       + L+  +PVH  Y +A+  +   +  R D+YG
Sbjct: 466 LAGAVLGPGSGWSEARVKKLI-GPSERYINLSKPLPVHIQYFTAYVDEGGRLVQRPDLYG 524

Query: 412 LDNVHVGIIPL 422
                   + L
Sbjct: 525 YSARVRKALGL 535


>gi|288959756|ref|YP_003450096.1| hypothetical protein AZL_a00210 [Azospirillum sp. B510]
 gi|288912064|dbj|BAI73552.1| hypothetical protein AZL_a00210 [Azospirillum sp. B510]
          Length = 545

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 87/320 (27%), Positives = 151/320 (47%), Gaps = 9/320 (2%)

Query: 95  PELPIRPLHLGNSSV---SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P  P  P+ +   S     V +L  RLI  G L P+   + +F+  VE+AV+ FQ   GL
Sbjct: 153 PIEPAPPVVITVRSPLADRVGKLSRRLIELGLL-PADKWTDSFNDDVEAAVRAFQTTEGL 211

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            P G V   T +A++      +  L+       +  +  +    +LVN+P  S+  +E+G
Sbjct: 212 QPDGKVGEVTRQALDRTPAQTVALLRRAAA-AMRAQQASIPDTSILVNLPGQSVTLIEHG 270

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +       +VGR  R+TP+L  ++  +  NP W +P +++ +D +  LR+       N  
Sbjct: 271 RPTFTMRAVVGRPSRKTPLLQDKVTSVTINPTWTVPPTVLSEDKLPALRKKGTTGIKN-- 328

Query: 272 HMIDEKGKEVFVEE-VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
            ++   G EV   + V+W S +P      Q PG  NA+   +    + +  ++H T +P 
Sbjct: 329 AVVYLDGAEVASTQSVNWWSVDPGRVRIVQKPGDDNALGRFRFNLTNGDGIFLHGTNDPR 388

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LF+  +R  +SGCVR+ +   +   LL      +   I + + T  T  ++L   +PV F
Sbjct: 389 LFSRDLRAASSGCVRLEDARLMAETLLGAAKV-TPAGIGQQLDTGDTKTIRLPVAIPVRF 447

Query: 391 VYISAWSPKDSIIQFRDDIY 410
           VY +A      +++   DIY
Sbjct: 448 VYWNASVDTAGVVRVHPDIY 467


>gi|237721416|ref|ZP_04551897.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229449212|gb|EEO55003.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 518

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 19/274 (6%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDR 226
             D    +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  
Sbjct: 240 TTDYYRDRLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKN 299

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP+L SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    +
Sbjct: 300 KTPLLSSRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSI 359

Query: 287 DWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            W         +  +QD    N++      F + ++ Y+HDTP    F    R  + GCV
Sbjct: 360 KWAKYAGSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCV 419

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPV 388
           R++  +D   +LLK+        I   +         K  P+           L   +P+
Sbjct: 420 RLQKALDFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPL 479

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              Y + +   D+ +++ +DIY  D   +  +  
Sbjct: 480 FIDYQTVYLSADNNLRYCEDIYKYDPSLLEAMNN 513


>gi|260171549|ref|ZP_05757961.1| ErfK/YbiS/YcfS/YnhG family protein [Bacteroides sp. D2]
          Length = 518

 Score =  279 bits (715), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 19/274 (6%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDR 226
             D    +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  
Sbjct: 240 TTDYYRDRLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKN 299

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP+L SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    +
Sbjct: 300 KTPLLSSRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSI 359

Query: 287 DWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            W         +  +QD    N++      F + ++ Y+HDTP    F    R  + GCV
Sbjct: 360 KWAKYAGSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCV 419

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPV 388
           R++  +D   +LLK+        I   +         K  P+           L   +P+
Sbjct: 420 RLQKALDFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPL 479

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              Y + +   D+ +++ +DIY  D   +  +  
Sbjct: 480 FIDYQTVYLSTDNNLRYCEDIYKYDPSLLEAMNN 513


>gi|293370854|ref|ZP_06617399.1| conserved domain protein [Bacteroides ovatus SD CMC 3f]
 gi|292634070|gb|EFF52614.1| conserved domain protein [Bacteroides ovatus SD CMC 3f]
          Length = 513

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 19/274 (6%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDR 226
             D    +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  
Sbjct: 235 TTDYYRDRLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKN 294

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP+L SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    +
Sbjct: 295 KTPLLSSRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGFQVDPHSI 354

Query: 287 DWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            W         +  +QD    N++      F + ++ Y+HDTP    F    R  + GCV
Sbjct: 355 KWAKYAGSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCV 414

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPV 388
           R++  +D   +LLK+        I   +         K  P+           L   +P+
Sbjct: 415 RLQKALDFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPL 474

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              Y + +   D+ +++ +DIY  D   +  +  
Sbjct: 475 FIDYQTVYLSADNNLRYCEDIYKYDPSLLEAMNN 508


>gi|160887148|ref|ZP_02068151.1| hypothetical protein BACOVA_05164 [Bacteroides ovatus ATCC 8483]
 gi|156107559|gb|EDO09304.1| hypothetical protein BACOVA_05164 [Bacteroides ovatus ATCC 8483]
          Length = 513

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 19/274 (6%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDR 226
             D    +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  
Sbjct: 235 TTDYYRDRLLVNMERARWQYALDKGQKYVIANVAAFMLQAVNEETDSILEMRICVGTVKN 294

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP+L SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    +
Sbjct: 295 KTPLLSSRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSI 354

Query: 287 DWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            W         +  +QD    N++      F + ++ Y+HDTP    F    R  + GCV
Sbjct: 355 KWAKYAGSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCV 414

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPV 388
           R++  +D   +LLK+        I   +         K  P+           L   +P+
Sbjct: 415 RLQKALDFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPL 474

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              Y + +   D+ +++ +DIY  D   +  +  
Sbjct: 475 FIDYQTVYLSADNNLRYCEDIYKYDPSLLEAMNN 508


>gi|315919863|ref|ZP_07916103.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693738|gb|EFS30573.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 513

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 19/274 (6%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDR 226
             D    +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  
Sbjct: 235 TTDYYRDRLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKN 294

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP+L SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    +
Sbjct: 295 KTPLLSSRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSI 354

Query: 287 DWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            W         +  +QD    N++      F + ++ Y+HDTP    F    R  + GCV
Sbjct: 355 KWAKYAGSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCV 414

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPV 388
           R++  +D   +LLK+        I   +         K  P+           L   +P+
Sbjct: 415 RLQKALDFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPL 474

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              Y + +   D+ +++ +DIY  D   +  +  
Sbjct: 475 FIDYQTVYLSTDNNLRYCEDIYKYDPSLLEAMNN 508


>gi|299148640|ref|ZP_07041702.1| putative periplasmic protein [Bacteroides sp. 3_1_23]
 gi|298513401|gb|EFI37288.1| putative periplasmic protein [Bacteroides sp. 3_1_23]
          Length = 513

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 19/274 (6%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDR 226
             D    +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  
Sbjct: 235 TTDYYRDRLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKN 294

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP+L SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    +
Sbjct: 295 KTPLLSSRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSI 354

Query: 287 DWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            W         +  +QD    N++      F + ++ Y+HDTP    F    R  + GCV
Sbjct: 355 KWAKYAGSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCV 414

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPV 388
           R++  +D   +LLK+        I   +         K  P+           L   +P+
Sbjct: 415 RLQKALDFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPL 474

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              Y + +   D+ +++ +DIY  D   +  +  
Sbjct: 475 FIDYQTVYLSTDNNLRYCEDIYKYDPSLLEAMNN 508


>gi|295086942|emb|CBK68465.1| Uncharacterized protein conserved in bacteria [Bacteroides
           xylanisolvens XB1A]
          Length = 513

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 19/274 (6%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDR 226
             D    +L VN+ R +       G +YV+ N+ A  L+A+ E     L   + VG V  
Sbjct: 235 TTDYYRNRLLVNMERARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKN 294

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP+L SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V
Sbjct: 295 KTPLLSSRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQV 354

Query: 287 DWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           +W         +  +QD    N++      F + ++ Y+HDTP    F    R  + GCV
Sbjct: 355 NWAKYAGKGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCV 414

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPV 388
           R++  +D   +LLK+        I   +         K  PV           L   +P+
Sbjct: 415 RLQKALDFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPL 474

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              Y + +   D+ +++ +DIY  D   +  +  
Sbjct: 475 FIDYQTVYLSADNNLRYCEDIYKYDPSLLEAMNN 508


>gi|294646674|ref|ZP_06724299.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
 gi|294807105|ref|ZP_06765923.1| conserved domain protein [Bacteroides xylanisolvens SD CC 1b]
 gi|292637962|gb|EFF56355.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
 gi|294445671|gb|EFG14320.1| conserved domain protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 521

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 30/320 (9%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--------PVDLRIRQLQVNLM 181
            + A D+   + +  F   HG  PS  +     E +            D    +L VN+ 
Sbjct: 200 ANAALDSLRANPIAAF---HGAQPSSPLYRKMQEELVRVNAWGKTDTTDYYRNRLLVNME 256

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           R +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L SRI  +  
Sbjct: 257 RARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSSRIYYMEL 316

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP--NFIF 298
           NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W         +  
Sbjct: 317 NPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAGKGVPYTV 376

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D   +LLK
Sbjct: 377 KQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALDFAFFLLK 436

Query: 359 DTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPVHFVYISAWSPKDSI 402
           +        I   +         K  PV           L   +P+   Y + +   D+ 
Sbjct: 437 EPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTVYLSADNN 496

Query: 403 IQFRDDIYGLDNVHVGIIPL 422
           +++ +D Y  D+  +  +  
Sbjct: 497 LRYCEDTYKYDSSLLEAMNN 516


>gi|298481479|ref|ZP_06999671.1| periplasmic protein [Bacteroides sp. D22]
 gi|298272343|gb|EFI13912.1| periplasmic protein [Bacteroides sp. D22]
          Length = 513

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 19/274 (6%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDR 226
             D    +L VN+ R +       G +YV+ N+ A  L+A+ E     L   + VG V  
Sbjct: 235 TTDYYRNRLLVNMERARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKN 294

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP+L SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V
Sbjct: 295 KTPLLSSRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQV 354

Query: 287 DWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           +W         +  +QD    N++      F + ++ Y+HDTP    F    R  + GCV
Sbjct: 355 NWAKYAGKGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCV 414

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPV 388
           R++  +D   +LLK+        I   +         K  PV           L   +P+
Sbjct: 415 RLQKALDFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPL 474

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              Y + +   D+ +++ +DIY  D   +  +  
Sbjct: 475 FIDYQTVYLSADNNLRYCEDIYKYDPSLLEAMNN 508


>gi|237715634|ref|ZP_04546115.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229444343|gb|EEO50134.1| conserved hypothetical protein [Bacteroides sp. D1]
          Length = 518

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 30/320 (9%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--------PVDLRIRQLQVNLM 181
            + A D+   + +  F   HG  PS  +     E +            D    +L VN+ 
Sbjct: 197 ANAALDSLRANPIAAF---HGAQPSSPLYRKMQEELVRVNAWGKTDTTDYYRNRLLVNME 253

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           R +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L SRI  +  
Sbjct: 254 RARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSSRIYYMEL 313

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP--NFIF 298
           NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W         +  
Sbjct: 314 NPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAGKGVPYTV 373

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D   +LLK
Sbjct: 374 KQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALDFAFFLLK 433

Query: 359 DTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPVHFVYISAWSPKDSI 402
           +        I   +         K  PV           L   +P+   Y + +   D+ 
Sbjct: 434 EPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTVYLSADNN 493

Query: 403 IQFRDDIYGLDNVHVGIIPL 422
           +++ +D Y  D+  +  +  
Sbjct: 494 LRYCEDTYKYDSSLLEAMNN 513


>gi|326798188|ref|YP_004316007.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
 gi|326548952|gb|ADZ77337.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
          Length = 487

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 79/324 (24%), Positives = 145/324 (44%), Gaps = 14/324 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSS 160
           L  G ++      R        +  S+  SV+FD  +    +K +     + P      +
Sbjct: 172 LEYGMTNPRKVLPRY------YIPVSRPDSVSFDRVLSVENLKHYLDS--IQPKSGAYRA 223

Query: 161 TLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
             +A+ N     +   L  N+ R++   +       + VNIPA  L  + +     +  V
Sbjct: 224 MQKALINENHGAKKIALIANMERLRWKYKMD-STHLIYVNIPAYQLYIIRDRSTKGQMKV 282

Query: 220 IVGRVD-RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           +VG+ D  +TP+L S+I+ +  NP W IP SI +K+++   + D  YL ++ + +     
Sbjct: 283 VVGKADGHETPMLASKIHSVQVNPIWNIPTSIAKKEILVQAKADKYYLANHGMDVYRRGV 342

Query: 279 KEVFVEEVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           K    + +DW+     N  + F+Q PG  N++   K  F + ++ Y+HDTP   +F+  +
Sbjct: 343 KIANPDTIDWSVYNEENLPYSFKQQPGNTNSLGLIKFLFKNGSSVYLHDTPAKAVFSRSM 402

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  + GCVRV   +DL   L  +   +     E   +      + L  +VPV   Y++  
Sbjct: 403 RAASHGCVRVEKPLDLARALFGEGEKYDLIKEEMSSEEPVAKTIGLKPQVPVVLDYVTCK 462

Query: 397 SPKDSIIQFRDDIYGLDNVHVGII 420
               S ++F  D+Y LD++    +
Sbjct: 463 MDSSSTLKFYPDVYKLDSLLYRSL 486


>gi|262408643|ref|ZP_06085189.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|262353508|gb|EEZ02602.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
          Length = 513

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 30/320 (9%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--------PVDLRIRQLQVNLM 181
            + A D+   + +  F   HG  PS  +     E +            D    +L VN+ 
Sbjct: 192 ANAALDSLRANPIAAF---HGAQPSSPLYRKMQEELVRVNAWGKTDTTDYYRNRLLVNME 248

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           R +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L SRI  +  
Sbjct: 249 RARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSSRIYYMEL 308

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP--NFIF 298
           NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W         +  
Sbjct: 309 NPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAGKGVPYTV 368

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D   +LLK
Sbjct: 369 KQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALDFAFFLLK 428

Query: 359 DTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPVHFVYISAWSPKDSI 402
           +        I   +         K  PV           L   +P+   Y + +   D+ 
Sbjct: 429 EPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTVYLSADNN 488

Query: 403 IQFRDDIYGLDNVHVGIIPL 422
           +++ +D Y  D+  +  +  
Sbjct: 489 LRYCEDTYKYDSSLLEAMNN 508


>gi|153807673|ref|ZP_01960341.1| hypothetical protein BACCAC_01955 [Bacteroides caccae ATCC 43185]
 gi|149130035|gb|EDM21247.1| hypothetical protein BACCAC_01955 [Bacteroides caccae ATCC 43185]
          Length = 514

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 19/272 (6%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDR 226
             D    +L VN+ R +     + G +YV+ N  A  L+AV E     L   + VG V  
Sbjct: 236 TTDYYRNRLLVNMERARWQYALEKGKKYVVANTAAFMLQAVNEETDSILEMRICVGSVKN 295

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP+L S+I  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    +
Sbjct: 296 RTPLLSSKIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGTQVDPHSI 355

Query: 287 DWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            W         +  +QD    N++      F +  + Y+HDTP    F+   R  + GCV
Sbjct: 356 KWAKYAGKGVPYTVKQDNKAGNSLGRIIFRFPNPYSVYLHDTPSKWAFSRKNRAVSHGCV 415

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPV 388
           R++  +D   +LLK+        I   +         K  P+           L   +P+
Sbjct: 416 RLQKALDFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPL 475

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
              Y + +   D+ +++ +DIY  D   +  +
Sbjct: 476 FIDYQTVYLSADNNMRYCEDIYNYDPSLLEAM 507


>gi|312115661|ref|YP_004013257.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220790|gb|ADP72158.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 569

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L  N+ + +  +   +G  YV  NIP  +   V+NG+V  +  ++ G++D+QTP+  
Sbjct: 259 AKRLLANMEQWR-WMPADLGDLYVWNNIPEYTQRVVKNGEVVRKERIVTGQLDKQTPVFT 317

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
             + +I F P W++P SI  ++++  L++    +++  + + D+ G+ V    ++W   +
Sbjct: 318 RTLKKITFKPTWIVPESIKVREILPSLQRGGGMMREWQLELRDKDGQTVDWRRINWYRTD 377

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT--PEPILFNNVVRFETSGCVRVRNII 350
              F   Q  G  + M   K  F S++  +MHD   P+  +FN   R  + GC+RV+N I
Sbjct: 378 IRIFNVVQPNGAKSVMGKVKFSFPSQHTVFMHDAYPPDKWMFNKARRTYSHGCMRVQNPI 437

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKT-TPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
            L   LLK+   +    + + V+T        +   +P+H  Y +A    D  +    D+
Sbjct: 438 GLAEILLKEDKGFEAAQVRDAVRTGGNDNEFDIERRIPIHMTYFTALVGDDGKLHTFPDV 497

Query: 410 YGLDNVHVGII 420
           YG +      +
Sbjct: 498 YGHERRITLAL 508


>gi|260642730|ref|ZP_05859514.1| putative periplasmic protein [Bacteroides finegoldii DSM 17565]
 gi|260620827|gb|EEX43698.1| putative periplasmic protein [Bacteroides finegoldii DSM 17565]
          Length = 512

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 19/267 (7%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILH 232
            +L +NL R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L 
Sbjct: 240 DRLLLNLERARWQYALDKGKKYVVANVAAFMLQAVNEETDSILEMRICVGSVRNKTPLLS 299

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W    
Sbjct: 300 SRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGTQVDPHSIKWAKYA 359

Query: 293 PP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +  +QD    N++      F +  + Y+HDTP    F    R  + GCVR++  +
Sbjct: 360 GKGVPYTVKQDNKTGNSLGRIIFRFPNPYSVYLHDTPSRWAFMRKNRAVSHGCVRLQKAL 419

Query: 351 DLDVWLLKDTPTWSRYHIEEVVK------TRKTTPV----------KLATEVPVHFVYIS 394
           D   +LL++        I   +         K  P+           L   VP+   Y +
Sbjct: 420 DFAFFLLEEPDELLEDRIRIAMDLKPISEEGKKLPISAAYRELKHYSLEKYVPLFIDYQT 479

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            +   D+ + + DDIY  D   +  + 
Sbjct: 480 VYLSADNNLMYCDDIYKYDPSLLKAMT 506


>gi|163759199|ref|ZP_02166285.1| hypothetical protein HPDFL43_05525 [Hoeflea phototrophica DFL-43]
 gi|162283603|gb|EDQ33888.1| hypothetical protein HPDFL43_05525 [Hoeflea phototrophica DFL-43]
          Length = 250

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 109/233 (46%), Positives = 154/233 (66%), Gaps = 2/233 (0%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAF 84
           S        S ++ IIN       +D+FD   +R      +  PI S +TI   E+A+  
Sbjct: 18  SAAGAAKAQSTIEAIINSPRRGSWDDQFDAKSSRSVAKTATRYPISSADTIGFVERAVFD 77

Query: 85  YQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           YQDI++RGGWP +P  + L +G S   V+ LR+RLI SGDL  + GLS AFD+YV+ AVK
Sbjct: 78  YQDIIARGGWPFVPATKKLRMGVSEPEVRLLRQRLIASGDLSANTGLSNAFDSYVDGAVK 137

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            FQ RHGL P G++ + + +A+NV  D+R+ QL+ NL+R++  +   +G RYV+VNIPAA
Sbjct: 138 KFQARHGLPPDGILGNYSYQALNVSADVRLGQLETNLVRLRS-MSGFLGDRYVMVNIPAA 196

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            +EAVENG+V LR T IVG++DRQTPIL+S+I+ I+ NPYW  PR   +KD++
Sbjct: 197 QIEAVENGRVVLRHTAIVGKIDRQTPILNSKIHEIILNPYWTSPRLDHRKDIV 249


>gi|42524313|ref|NP_969693.1| putative amidase [Bdellovibrio bacteriovorus HD100]
 gi|39576522|emb|CAE80686.1| putative amidase [Bdellovibrio bacteriovorus HD100]
          Length = 510

 Score =  265 bits (679), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 86/354 (24%), Positives = 161/354 (45%), Gaps = 28/354 (7%)

Query: 92  GGWPELP--IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           G W ++     PL L +    ++ ++ RL + G     + +   FD  +  AV   Q   
Sbjct: 158 GTWQDIVPVTTPLRLYSIHPVIREIKSRLALLGY--TMRNMDDRFDGDLLKAVTDIQWNM 215

Query: 150 GLDPSGMVDSS--TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
            + P G +         ++V    R+RQ+QV++ +++    Q    +Y+ VN+  +    
Sbjct: 216 RIRPDGEISPKGKVWSFLSVSCMDRVRQIQVDMEKMR-WFPQYFEKKYIFVNLAMSYFIM 274

Query: 208 VENGK---VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR---- 260
           ++        +    I GR  R++P +   I  ++ NP+WV+P +I  +D +  L+    
Sbjct: 275 MDQSTDWPRVMSFRTINGRPARKSPTMRDEIVNVIINPFWVVPPTIFYEDKVNDLKDLTS 334

Query: 261 -QDPQYLKDNNIH-MIDEKGKEVFVEEVDWNSPEP----PNFIFRQDPGKINAMASTKIE 314
            Q  +Y   ++    +    ++V    +DW         P+ I RQ P   NA+   K +
Sbjct: 335 EQIREYFDSHHYEAWVGGFRRKVDPTTIDWKGIAAGTVDPDIIIRQLPHLGNALGVLKFD 394

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             +    Y+HDT +  LF+  +R  +SGCVR+   +DL  +LL+DTP W R  I  ++  
Sbjct: 395 LTNSFAIYLHDTNQRELFDTPMRQLSSGCVRLEKPLDLAEYLLEDTP-WDRQTIASMMAR 453

Query: 375 R-----KTTPVKLA--TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
                 K T + +     +PV+  Y+++    D +++F DDIYG +   +  + 
Sbjct: 454 PGEVVAKPTEIPVPSYKRMPVYTAYLTSMMNSDEVVRFVDDIYGQNPAVLRHLD 507


>gi|145637696|ref|ZP_01793349.1| hypothetical protein CGSHiHH_01956 [Haemophilus influenzae PittHH]
 gi|145269098|gb|EDK09048.1| hypothetical protein CGSHiHH_01956 [Haemophilus influenzae PittHH]
          Length = 461

 Score =  264 bits (676), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 66/220 (30%), Positives = 118/220 (53%), Gaps = 6/220 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSEQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           L   LLK+   W+      V+ ++K T   + ++ PV ++
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKNTSAPIRSDNPVFYI 450


>gi|300778249|ref|ZP_07088107.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300503759|gb|EFK34899.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 468

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 74/250 (29%), Positives = 123/250 (49%), Gaps = 7/250 (2%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           +  I+++ +N+ R++ +        Y+LVNIPA SL+ V+  K  L   VIVG+    +P
Sbjct: 215 EAEIKKVAINMERLRWM--GISSDAYLLVNIPAYSLDFVQKDK-TLHYKVIVGKPSTPSP 271

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +L SR++     P W +P++I  K+M+  + ++ QYL++++  + D  GK V V      
Sbjct: 272 VLKSRVDYFTTAPDWKVPQNIFIKEMLPKIIKNSQYLEEHHYSLYDRSGKIVPVTSAKLK 331

Query: 290 SP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
               +P  +  RQ  G  NA+ +    F +    Y+HDT +  LF    R  + GC+RV 
Sbjct: 332 QAYRKPYQYSIRQSSGCDNALGAVVFRFSNSYGVYLHDTSQKQLFEKTQRALSHGCIRVE 391

Query: 348 NIIDLDVWLLK-DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
           N  DL   LLK D        ++  +   +     L   VP+   Y++    K+  + F 
Sbjct: 392 NAGDLAAQLLKHDGTEDEIPLMKSFMDRYERKDFVLKQPVPIMITYLTCLV-KNGKMVFY 450

Query: 407 DDIYGLDNVH 416
           +DIY LD V 
Sbjct: 451 NDIYNLDPVL 460


>gi|85709388|ref|ZP_01040453.1| hypothetical protein NAP1_10923 [Erythrobacter sp. NAP1]
 gi|85688098|gb|EAQ28102.1| hypothetical protein NAP1_10923 [Erythrobacter sp. NAP1]
          Length = 460

 Score =  262 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 58/273 (21%), Positives = 115/273 (42%), Gaps = 21/273 (7%)

Query: 159 SSTLEAMNVPVDL---RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +   E + V       + + +Q N+ R +  L + +G +Y++ N+P   L      ++  
Sbjct: 183 ARLREELAVTPAEEAEKRKLIQANMDRWR-WLARDLGTQYLITNVPEYQLRLTVRDRIIS 241

Query: 216 RSTVIVGRVDR-QTPILHSRINRIMFNPYWVIPRSIIQKDMMA-LLRQDPQYLKDNNIHM 273
               +VG+  R  TP L   +  ++FNP W +P+SI++ + +   +  +P + + N    
Sbjct: 242 TYRTVVGKPGRTATPQLAEMVEGVVFNPTWTVPQSIVKGEGLGERVLGNPGWARANGYTA 301

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
                  +                  Q PG  N++   K+E  + +  + HDTP   LF 
Sbjct: 302 TRGSNGWI---------------TVVQQPGPGNSLGRMKLEMPNPHAIFFHDTPSRHLFA 346

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
           N  R  + GC+R    ++L + +       +R    E+  + K T V +  ++P +  Y 
Sbjct: 347 NANRALSHGCIRTERALELAITMAILGKGATRDEAVEIATSGKYTKVMIEKQLPAYITYF 406

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
           +     +  ++  DDIYG D   +  +  P + 
Sbjct: 407 TMGVDIEGELRTFDDIYGRDAPVLASLDKPREA 439


>gi|85374905|ref|YP_458967.1| hypothetical protein ELI_10390 [Erythrobacter litoralis HTCC2594]
 gi|84787988|gb|ABC64170.1| hypothetical protein ELI_10390 [Erythrobacter litoralis HTCC2594]
          Length = 473

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 18/256 (7%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR-QT 228
             R + ++ N+ R +  L + +G +Y++ N+P   L    N K+      IVG+  R  T
Sbjct: 209 SERFKLIRANMDRWR-WLPRDLGGQYLMTNVPEYQLRLTVNDKIVRTYKTIVGKPGRTAT 267

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMM-ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           P L   +  ++ NP W +P+SI++ + + A +  +P + +             V      
Sbjct: 268 PQLAEVVEGVILNPTWTVPQSIVKGEGLGAKVLNNPGWARAKGYKATKGANGWV------ 321

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                       Q PG  N++   K++  +R+  ++HDTP   LF    R  + GC+R  
Sbjct: 322 ---------TVVQQPGPTNSLGRMKLDMPNRHAIFLHDTPSRNLFGTSNRALSHGCIRTE 372

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
              +L + L       +     E++ + + T V    ++PV+  Y +  +  D  +    
Sbjct: 373 RATELALTLSILQAGLTADEGVELLNSGEYTRVGFEKKMPVYITYFTMATDIDGKLSTFK 432

Query: 408 DIYGLDNVHVGIIPLP 423
           D+YG D+        P
Sbjct: 433 DLYGRDDAVKAAFDAP 448


>gi|332880541|ref|ZP_08448215.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332681529|gb|EGJ54452.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 508

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 77/341 (22%), Positives = 134/341 (39%), Gaps = 34/341 (9%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR--------------HGLDPSGMVD 158
           ++  RL  + D          +D   ESA + F  +                + P   + 
Sbjct: 166 QIFNRLEQT-DTTQKAPFRRLYDIETESADQEFVHKALSLLKDGNFTDFFRDIQPDNPLY 224

Query: 159 SS-TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG-LR 216
              T   +        R+  VN+ R +         +YV VN+ AA+L AV+  K   L 
Sbjct: 225 RQLTDHYLQTQNPETRRKAIVNIERSRWRTPFAAHDKYVWVNLAAATLYAVDENKPEYLD 284

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
             + +G    +TP+L SRI R+  NPYW IP SI++K++      D  Y   N   + ++
Sbjct: 285 MKICIGSPKNKTPMLQSRIERVDMNPYWNIPYSIVKKEIAPRHAGDEAYFSRNRYRIFNK 344

Query: 277 -KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
             G+E+    V  +      +  RQD G+ N++      F +  + Y+HDT     F   
Sbjct: 345 ETGEELPPAAVTSDMLTSGRYRVRQDNGEGNSLGRLIFRFPNNFSIYLHDTNNRQAFKRT 404

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK-TRKTTPVKLATE--------- 385
            R  + GC+R+   ++L V+LL      +   + E +      + V +  +         
Sbjct: 405 NRAISHGCIRIEKPLELAVFLLNSPEEKTVNKLREAIGLPPLNSSVPIEKKEGEQLKVGI 464

Query: 386 ------VPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
                 +PV   Y + +   D   +   D YG D + +  +
Sbjct: 465 QRFDPSIPVVIDYYTLYPKPDGGWEESPDPYGYDEILLKKL 505


>gi|255533072|ref|YP_003093444.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
 gi|255346056|gb|ACU05382.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
          Length = 512

 Score =  260 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 80/296 (27%), Positives = 125/296 (42%), Gaps = 51/296 (17%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG----------- 222
           + + VN+ R++  L   +G  +V VNIP  +L             V VG           
Sbjct: 215 KTVMVNMERLRWKLP-DLGEEHVEVNIPDFTLTWFSGQDTLSHMKVCVGGAREKDYAEKI 273

Query: 223 -----------RVD-RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
                      +    +TPIL+S++N I  NP W IP SI + ++     +DP YL +NN
Sbjct: 274 KLYLKSGNLDDKPKNHETPILYSKLNSIQVNPIWNIPVSIARSEIYWQAIRDPYYLSNNN 333

Query: 271 IHMIDEKGKEVFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           I +  +       + + WN    E   F F+Q  G+ NA+   K  F + ++ Y+HDT  
Sbjct: 334 IKVYYKGQLVTDPDTIQWNKYPREKLPFQFKQGSGEGNALGKFKFIFDNGSSIYLHDTNN 393

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL------ 382
              F    R  + GCVRV   ++    L+KD   + +  +E  +    TT ++L      
Sbjct: 394 KSAFARNNRAISHGCVRVEKPLEFAEMLVKDKYQYDQLRMEVNLPPVDTTKMELYRKKLA 453

Query: 383 ------------------ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
                                VP+   YI+AWS ++  IQFR D+YGLD      +
Sbjct: 454 KKADTLNIFQLKPKWFGTKKPVPLIINYITAWS-QNGTIQFRPDVYGLDETLYAAM 508


>gi|145641085|ref|ZP_01796666.1| hypothetical protein CGSHiR3021_08446 [Haemophilus influenzae
           R3021]
 gi|145274246|gb|EDK14111.1| hypothetical protein CGSHiR3021_08446 [Haemophilus influenzae
           22.4-21]
          Length = 288

 Score =  260 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 119/220 (54%), Gaps = 6/220 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 63  AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 119

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 120 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 179

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 180 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSDQ 238

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           L   LLK+   W+      V+ ++KTT   + ++ PV ++
Sbjct: 239 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFYI 277


>gi|262040976|ref|ZP_06014198.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041670|gb|EEW42719.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 466

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 5/185 (2%)

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNS 290
             +N ++ NP W +P ++ +KD++  +R +P YL+ +   ++     +  +    VDW++
Sbjct: 265 GALNNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWST 324

Query: 291 PEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               N  FR  Q PG  N++   K    S +  Y+HDTP   LF   VR  +SGCVRV  
Sbjct: 325 ITENNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNK 384

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
             +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R D
Sbjct: 385 ASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTD 443

Query: 409 IYGLD 413
           IY  D
Sbjct: 444 IYNYD 448


>gi|262361436|gb|ACY58157.1| hypothetical protein YPD4_1249 [Yersinia pestis D106004]
          Length = 205

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 6/190 (3%)

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVD 287
           + S +N ++ NP W +P S++++D++   R D  Y + N   ++     +   +    +D
Sbjct: 1   MSSALNNVVVNPPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMID 60

Query: 288 WNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           W+   P NF +R  Q PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVR
Sbjct: 61  WSIISPNNFPYRLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVR 120

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V    DL   LL+D   W+   +   VK   TT V +   VPV   Y++AW  +D   QF
Sbjct: 121 VNKASDLANMLLQDA-GWNDARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQF 179

Query: 406 RDDIYGLDNV 415
           R DIY  D +
Sbjct: 180 RTDIYNYDKM 189


>gi|330996788|ref|ZP_08320660.1| conserved domain protein [Paraprevotella xylaniphila YIT 11841]
 gi|329572510|gb|EGG54161.1| conserved domain protein [Paraprevotella xylaniphila YIT 11841]
          Length = 508

 Score =  259 bits (663), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 116/270 (42%), Gaps = 19/270 (7%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG-LRSTVIVGRVDRQ 227
            + R + + +N+ R +    +    +YV VN+ AA L AV+  K   L   + +G    +
Sbjct: 237 PETRRKAI-INIERSRWRTPRAAHDKYVWVNLAAAKLYAVDEKKPEYLDMKICIGSPKSK 295

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEEV 286
           TP+L SRI R+  NPYW IP SI++K++      +  Y   N   +  +  G+E+    V
Sbjct: 296 TPMLQSRIERVDMNPYWNIPYSIVKKEIAPRHAGNEAYFSRNRYRIFSKETGEELPPAAV 355

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
             +      +  RQD G+ N++      F +  + Y+HDT     F    R  + GC+R+
Sbjct: 356 TADMLTSGRYRVRQDNGEGNSLGRLIFRFPNNFSIYLHDTNNKQAFKRTNRAISHGCIRI 415

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVV-------------KTRKTTPV---KLATEVPVHF 390
              ++L V+LL      +   + E +             K  +   V   +    +PV  
Sbjct: 416 EKPLELAVFLLDTPEEKTVNRLREAIGLPPLNSSIPIEKKEGEPLKVGIQRFDPSIPVVI 475

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            Y + +   D   +   D YG D + +  +
Sbjct: 476 DYYTLYPKPDGGWEESPDPYGYDEILLKKL 505


>gi|149185534|ref|ZP_01863850.1| hypothetical protein ED21_20954 [Erythrobacter sp. SD-21]
 gi|148830754|gb|EDL49189.1| hypothetical protein ED21_20954 [Erythrobacter sp. SD-21]
          Length = 475

 Score =  255 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 116/265 (43%), Gaps = 25/265 (9%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR-QTP 229
            RI+ ++ N+ R +  L Q +G +Y++ N+P   L    NG++      IVG+  R  TP
Sbjct: 207 ARIKLIRANMDRWR-WLPQDLGRQYLVTNVPEYMLRLTVNGRIIKSYRTIVGKPGRTATP 265

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMM-ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
            L   +  ++FNP W +P+SI+  + +   +  +P + ++            +       
Sbjct: 266 QLAEMVEAVIFNPTWTVPQSIVVGEGLGNKVLNNPGWARNAGYKATKGANGWI------- 318

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                      Q PG  N++   K++  + +  ++HDTP   LFN   R  + GC+RV+ 
Sbjct: 319 --------TVVQQPGPTNSLGLMKLDMPNEHAIFLHDTPSRHLFNQDARALSHGCIRVKG 370

Query: 349 IIDLDVW--LLKDTPTWS-----RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
             +L +   +L +    +     +  + E+  + + T  ++  + PV+  Y +  +  + 
Sbjct: 371 ARELAMTMSMLGNASNRADIPAIQEEVSEITMSGEYTRYEMKKQWPVYITYFTMATDVNG 430

Query: 402 IIQFRDDIYGLDNVHVGIIPLPEDH 426
            ++   DIY  D   +  +  P   
Sbjct: 431 EMKTFRDIYDRDKPVLAALDAPRQE 455


>gi|190149392|ref|YP_001967917.1| hypothetical protein APP7_0123 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189914523|gb|ACE60775.1| Uncharacterized protein [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
          Length = 213

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 5/198 (2%)

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           IVGR DR+TP+++S+++ ++ NP W IP +I+ KD++  L ++P +       + D KG 
Sbjct: 2   IVGRDDRRTPVMYSKLSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGN 61

Query: 280 EVFVEEVDWNSPEPPN---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           ++    V+W          +  RQ  G  +A+   K    S +  Y+HDTP   LF    
Sbjct: 62  KINPRSVNWAQYVNSKNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTD 121

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGCVRV    DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW
Sbjct: 122 RALSSGCVRVERSDDLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAW 180

Query: 397 SPKDSIIQFRDDIYGLDN 414
             ++  +    DIY  D 
Sbjct: 181 V-ENGKVYTLPDIYKFDT 197


>gi|299140698|ref|ZP_07033836.1| periplasmic protein [Prevotella oris C735]
 gi|298577664|gb|EFI49532.1| periplasmic protein [Prevotella oris C735]
          Length = 472

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 33/277 (11%)

Query: 175 QLQVNLMRIKKLLEQKMG--LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           ++  N+ R +     + G   +YVLVNIP+  L AV NG+  L   +  G  + +TP+L 
Sbjct: 192 RILCNMERCRWRYYDEPGKHEKYVLVNIPSFHLRAV-NGREVLEMKIGCGTTETKTPLLT 250

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSP 291
           SRI R+  NP WVIPRSI +K++      D QY   +   + D K G++V  + +  +  
Sbjct: 251 SRIMRMDINPQWVIPRSITEKNIANHF-GDRQYFDSHRYFVRDRKTGQKVPFDRITQDMF 309

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
              +++  Q  G  N++      F +  + ++HDT    +F+   R  + GC+RV    D
Sbjct: 310 HSKDYLVIQKGGIGNSLGRIIFRFNNSFSVFLHDTNRHNVFSQENRGVSHGCIRVERPFD 369

Query: 352 LDVWLLKDTPT--------------------WSRYHIEEVVKTRKTT--------PVKLA 383
           L V+LLKD                             + + K +  T         +K+ 
Sbjct: 370 LAVFLLKDKNESLIRKLHYSMTAEIGGESTVLPEEEKKMIKKQKPDTLQRSMLISSLKVE 429

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            ++P+   Y + +   +  +Q+  D+YG D V   ++
Sbjct: 430 PQIPIFITYFTIYPDVNGKLQYFSDVYGYDKVIFDVL 466


>gi|326388316|ref|ZP_08209912.1| hypothetical protein Y88_3197 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207048|gb|EGD57869.1| hypothetical protein Y88_3197 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 386

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 23/245 (9%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            R   L  N+ R +  L Q +G  YVLVN  A  +    +G+      V+VG+    TP 
Sbjct: 152 ARRATLATNMDRWR-WLPQSLGADYVLVNAAAFEVRLWRHGQQVGTWPVVVGKTKSPTPT 210

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
             ++++ + FNP+W IP +I+++ +  ++R+ P   +                       
Sbjct: 211 FSAQVSGVTFNPWWDIPPAIVRESIGGMMRRHPALARQRGYIHTGAS------------- 257

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                  +RQ PG  NA+   K+   +  N Y+HDTPE  LF    R  + GC+RV + I
Sbjct: 258 -------YRQKPGPANALGQMKLVMPNPFNVYLHDTPEKKLFARDTRAFSHGCIRVSDAI 310

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
                L++D    S   ++ ++ T +TT V L   +PV+  Y +A +  D  +    DIY
Sbjct: 311 GFATTLVQDVK--SADEVKAIIATGRTTTVDLPMHLPVYVTYFTATTRSDGTLAILPDIY 368

Query: 411 GLDNV 415
             D  
Sbjct: 369 KRDGT 373


>gi|296283068|ref|ZP_06861066.1| hypothetical protein CbatJ_05580 [Citromicrobium bathyomarinum
           JL354]
          Length = 468

 Score =  253 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 18/261 (6%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR- 226
           P   R + +Q N+ R +  L + +G +Y++ N+P   L    N K+      IVG+  R 
Sbjct: 203 PGSKRYKLIQANMDRWR-WLPRDLGHQYLITNVPEYQLRLTVNDKIMRTYRTIVGKPGRT 261

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMA-LLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
            TP L   +  ++ NP W +P+SI++ + +   +  +P +                    
Sbjct: 262 ATPQLAESVEGVILNPNWTVPQSIVKGEGLGERVLGNPSWAASKGYKATRG--------- 312

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
                         Q PG  NA+   K++  +R+  + HDTP   LF+   R  + GC+R
Sbjct: 313 ------ANGYISVVQGPGPGNALGRMKLDMPNRHAIFFHDTPSRGLFSQADRALSHGCIR 366

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
                +L + L       +     E + + + T V+  +++P +  Y +  +  D  +  
Sbjct: 367 TERATELALTLAILQAGLTADEGVEKLASGEYTRVEFNSKMPAYITYFTMGTTIDGEMAT 426

Query: 406 RDDIYGLDNVHVGIIPLPEDH 426
             DIY  D   +     P   
Sbjct: 427 FKDIYDRDAPVLAAFEAPRKA 447


>gi|145629244|ref|ZP_01785043.1| hypothetical protein CGSHi22121_10590 [Haemophilus influenzae
           22.1-21]
 gi|144978747|gb|EDJ88470.1| hypothetical protein CGSHi22121_10590 [Haemophilus influenzae
           22.1-21]
          Length = 459

 Score =  253 bits (647), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 6/206 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 234 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 290

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 291 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 350

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 351 NKFPYRVRQAAGD-SALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 409

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKT 377
           L   LLK+   W+      V+ ++K 
Sbjct: 410 LASILLKEA-GWTETRKNTVLASKKP 434


>gi|281425838|ref|ZP_06256751.1| putative cell wall degradation protein [Prevotella oris F0302]
 gi|281400099|gb|EFB30930.1| putative cell wall degradation protein [Prevotella oris F0302]
          Length = 472

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 33/277 (11%)

Query: 175 QLQVNLMR--IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           ++  N+ R   +   E     +YVLVNIP+  L AV NG+  L   +  G  + +TP+L 
Sbjct: 192 RILCNMERCRWRYYDEPSKHEKYVLVNIPSFHLRAV-NGREVLEMKIGCGTTETKTPLLT 250

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSP 291
           SRI R+  NP WVIPRSI +K++      D QY   +   + D K G++V  + +  +  
Sbjct: 251 SRIMRMDINPQWVIPRSITEKNIANHF-GDRQYFDSHRYFVRDRKTGQKVPFDRITQDMF 309

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
              +++  Q  G  N++      F +  + ++HDT    +F+   R  + GC+RV    +
Sbjct: 310 HSKDYLVIQKGGIGNSLGRIIFRFNNSFSVFLHDTNRHNVFSQENRRVSHGCIRVERPFE 369

Query: 352 LDVWLLKDTPT--------------------WSRYHIEEVVKTRKTT--------PVKLA 383
           L V+LLKD                             + + K +  T         +K+ 
Sbjct: 370 LAVFLLKDKNESLIRKLHYSMTAEIGGESTVLPEEEKKMIKKQKPDTLQRSMLISSLKVE 429

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            ++P+   Y + +   +  +Q+  D+YG D V   ++
Sbjct: 430 PQIPIFITYFTIYPDVNGKLQYFSDVYGYDKVIFDVL 466


>gi|218461005|ref|ZP_03501096.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli Kim 5]
          Length = 245

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 92/212 (43%), Positives = 136/212 (64%), Gaps = 4/212 (1%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            S LD ++N       +D+FD   A R    I S+ PI+  +++A  ++AI  YQ I + 
Sbjct: 35  QSALDGLLNAPRRGNWDDQFDAKAASRTATAIVSNTPILGPQSVASAQQAIMQYQQIAAA 94

Query: 92  GGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           GGWPE+      L LG S  +VQ LR+RL I+GDL    GLS AFD+YV+ AVK FQ RH
Sbjct: 95  GGWPEVNPGDQRLQLGVSHPAVQALRQRLAITGDLPREAGLSSAFDSYVDGAVKRFQARH 154

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G++   TL+AMN+P D+R++QL  N++R++    + +G R+++VNIPAA +EAVE
Sbjct: 155 GLPADGVLGEFTLKAMNIPADVRLQQLNTNIVRLQTF-PEDLGRRHLMVNIPAAYVEAVE 213

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           +G V  R T +VGR+ R T +++S+I  ++ N
Sbjct: 214 DGSVATRHTAVVGRLSRPTHLVNSKIYEVILN 245


>gi|149275869|ref|ZP_01882014.1| hypothetical protein PBAL39_21400 [Pedobacter sp. BAL39]
 gi|149233297|gb|EDM38671.1| hypothetical protein PBAL39_21400 [Pedobacter sp. BAL39]
          Length = 532

 Score =  249 bits (637), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 80/308 (25%), Positives = 127/308 (41%), Gaps = 51/308 (16%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           L+A  +      R + +N+ R++  L   MG  YV VNIP  SL             V V
Sbjct: 223 LKAGGLGSSASARTILINMERLRWKLP-DMGNEYVEVNIPDFSLTWFNKQDTVSHMKVCV 281

Query: 222 G----------------------RVD-RQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           G                      +    +TPIL+S++N I  NP W IP SI + ++  +
Sbjct: 282 GGAREANYKEKIATYLKTKSLDDKPKNHETPILYSKLNSIQVNPIWNIPVSIARSEIYWM 341

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFY 316
            R+DP YL +NNI++  +       + + WN    E   F F+Q  G  NA+   K  F 
Sbjct: 342 ARKDPFYLSNNNINVYYKGKLVNDPDTIQWNKYPREKLPFQFKQGSGGGNALGKFKFIFD 401

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           + ++ Y+HDT     F    R  + GCVRV   ++    L+     + +  +E  +    
Sbjct: 402 NGSSIYLHDTNNKTAFGRANRAISHGCVRVERPLEFAEKLVGSKYQYDQLRMEVNLPPLD 461

Query: 377 TTPVKL------------------------ATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
           TT + +                           VP+   Y++AWS ++  I+FR D+Y L
Sbjct: 462 TTKMNVYRKKLAQKADTLNAFQLKPKWFGTKKPVPLIINYVTAWS-QNGKIEFRPDVYRL 520

Query: 413 DNVHVGII 420
           D      +
Sbjct: 521 DETLWTAM 528


>gi|317502835|ref|ZP_07960937.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315666050|gb|EFV05615.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 509

 Score =  248 bits (635), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 34/294 (11%)

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQ--KMGLRYVLVNIPAASLEAVENGKVGLRS 217
            +L A+    + R R +  N+ R +   +    +  +YVLVNIP+  L  V    V    
Sbjct: 215 QSLLAITRDKNER-RTILCNMDRCRWRYKDTPDLHEKYVLVNIPSFHLRMVNRDDVR-EM 272

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI-DE 276
            +  G  D +TP+L SRI R+  NP W++PRSII+K ++     D  Y   ++  +   +
Sbjct: 273 KIGCGSKDTKTPLLTSRIIRMDVNPQWIVPRSIIKKSIVNHC-GDRHYFDSHHFFVRHRK 331

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            GK++  +++        +++  Q  G  N++      F +  + ++HDT +  +F+   
Sbjct: 332 TGKKIPFDQITREMLLSKDYLVIQTGGLGNSLGRIIFRFPNGFSVFLHDTNQQNIFSQTD 391

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI-----------------EEVVKTRKTTP 379
           R  + GCVRV    DL V+LLKD        +                 EE     KT P
Sbjct: 392 RDVSHGCVRVERPFDLAVFLLKDKEASIIRKLHYSMTAKIGEEGVNSSEEEHKNMEKTRP 451

Query: 380 VKLAT-----------EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
             L             +VP++  Y + +      +Q   D+YG D V    +  
Sbjct: 452 DTLKKSLILRSLSVEPQVPIYLTYFTIYPDGKGKLQHFADVYGFDKVIFKSLRN 505


>gi|300727069|ref|ZP_07060488.1| putative cell wall degradation protein [Prevotella bryantii B14]
 gi|299775613|gb|EFI72204.1| putative cell wall degradation protein [Prevotella bryantii B14]
          Length = 507

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 14/266 (5%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQK--MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           N+  + R R L VN+ R +  L     +  +YV+VNIPA SL AV+  KV  +  V+VG 
Sbjct: 240 NITAEQR-RLLLVNMERSRWRLSDYPYLHTKYVIVNIPALSLFAVDGDKVQ-QMKVVVGA 297

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK-GKEVF 282
           +  +TP+LHS   R+  NP W+IP SI+ K  +A    +  Y   ++  + +   GK V 
Sbjct: 298 LKTKTPLLHSNFTRMDINPQWLIPMSIL-KSSVARFAGNTSYFNRHHYFIRNRSTGKVVP 356

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
             +V        N++  Q+ G  N++      F +  + Y+HDT    +F    R  + G
Sbjct: 357 TNQVTSAMILSGNYVVVQEGGPYNSLGRIIFRFNNDYSIYLHDTNSRGVFQKEDRCLSHG 416

Query: 343 CVRVRNIIDLDVWLLKDTP--------TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
           CVRV N  DL V++L +          + +   +    K +    +K+  ++PV  VY +
Sbjct: 417 CVRVENPFDLAVFMLDNNKSVIGRIKYSMTVDSVTGPDKNKLIHSMKVMQDIPVFIVYYT 476

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGII 420
            +  +   ++   D+YG D +    +
Sbjct: 477 LYPNRQGELEQYQDVYGYDQIIYKHL 502


>gi|288801197|ref|ZP_06406652.1| peptidoglycan-binding domain 1 [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288331808|gb|EFC70291.1| peptidoglycan-binding domain 1 [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 460

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 26/270 (9%)

Query: 175 QLQVNLMRIKKLLEQ--KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           ++ VN+ R +       ++  +YVLVN+P+  L+AV+   V     V  G +  +TP+L+
Sbjct: 188 KVLVNMERCRWRHNDYPELHKKYVLVNVPSFYLQAVDEDSV-FSMRVACGALSTKTPLLN 246

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSP 291
           S I R+  NP W+IP SI++K +++ L  +  Y   ++  +     GKE+ + EV  +  
Sbjct: 247 STIERMDINPQWIIPLSIVKKQIISQL-GNRHYFDSHSYFIRHVATGKEIDISEVTPDML 305

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +   Q  G+ NA+      F +  + Y+HDT     F+   R  + GC+RV   ++
Sbjct: 306 LSGAYKVVQRGGEGNALGRIVFRFPNNFSVYLHDTSSREAFSRFDRGVSHGCIRVEKPLE 365

Query: 352 LDVWLLKDTPTWSRYHI---------------------EEVVKTRKTTPVKLATEVPVHF 390
           L ++LL+D        +                      ++ + R      L   VP+  
Sbjct: 366 LAIFLLQDKEEALIDKLIYSTTVDMKTDSRNNEKDCLENKIDRKRLINSKSLKPSVPLFI 425

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            Y + +  +  +++   D+YG D V    +
Sbjct: 426 TYYTLYPDEKGVMRDYPDVYGYDKVIARYL 455


>gi|260912258|ref|ZP_05918809.1| peptidoglycan binding protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260633559|gb|EEX51698.1| peptidoglycan binding protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 549

 Score =  247 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 24/276 (8%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
               R+R L  N+ R +   +       +YVLVN+P+  L+A+E G   L   +  G +D
Sbjct: 274 SAADRVRLL-CNIERSRWRQDDYPQNHRKYVLVNVPSFHLDAIE-GDSVLTMRMACGTLD 331

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK-GKEVFVE 284
            +TP+L+S I R+  NP W+IPRSII+K+++A    +  Y   +   +++   G+ V   
Sbjct: 332 TKTPLLNSHIMRMDVNPQWIIPRSIIKKEVIAHA-GNTDYFDRHRYFILNRSTGRRVDPC 390

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            V       P++   Q+ G+ N++      F +  + ++HDT     F    R  + GC+
Sbjct: 391 SVSAGMLLTPDYFVVQEGGEGNSLGRIVFRFNNNFSIFIHDTSSKWAFERGNRGVSHGCI 450

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP------------------VKLATEV 386
           RV+   +L V+LLKD        I   ++   + P                  VK+   V
Sbjct: 451 RVQKPFELAVFLLKDKDKSLIDKITYSMQADLSKPKDGEEPKPRVDYRRLVNSVKVNPNV 510

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           P+   Y + +      IQ   D+YG D V    +  
Sbjct: 511 PLFITYYTLYPDMAGRIQTYADVYGYDQVLYRYLRN 546


>gi|312886219|ref|ZP_07745834.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311301326|gb|EFQ78380.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 542

 Score =  246 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 48/298 (16%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD---- 225
            L++R +++N+ R++     K   RY+ VNIPA  L+ +EN KV     V +G       
Sbjct: 240 SLQLRTIKLNMERLRWQTPAKDS-RYLWVNIPAFKLQWIENKKVVFDMKVCLGEPKPAGY 298

Query: 226 -------------------RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
                               +T IL SRIN I  NP W IP SI Q ++   + ++P YL
Sbjct: 299 DTMLLRYLKTHSIDDKPVNHETTILCSRINTIQLNPNWNIPSSIAQNEIYYAILRNPAYL 358

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMH 324
            +NNI +  +       + + W   +     + F+QD  ++NA+   K  F +    Y+H
Sbjct: 359 SNNNIRVYYKDKLVTQPDTIRWGRIQRQKIPYKFKQDASELNALGKFKFIFDNEAGIYLH 418

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWL--------------------LKDTPTWS 364
           DTP    F +  R  + GCVRV + + L   L                    LKDT  ++
Sbjct: 419 DTPNKKAFGSSWRAVSHGCVRVEDPLKLSEALVNDTNMVDNIRMEVGLKPVNLKDTTKYN 478

Query: 365 RYHIEEVVKTR--KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
               +  VK    K+  + L  ++ +   Y + W  ++  + F  D Y +D V    +
Sbjct: 479 AIQAKRAVKGFELKSKYIGLKPDMQLFIDYYTCWPDENGKLVFYADAYRMDTVLEKAM 536


>gi|284036319|ref|YP_003386249.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
 gi|283815612|gb|ADB37450.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
          Length = 403

 Score =  245 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 9/245 (3%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQT 228
            LR+ +  +N  R    + +    ++VLVNIPA  L   +  GK  L   VI G+ D+ T
Sbjct: 160 SLRLIRQTLNFYR---YINRFDPDQFVLVNIPAGELNVFDRTGKRLLPMQVISGKPDKMT 216

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P + + I  I+  PYW +P++I   +M+  +++D  Y+ + N+ ++D K KEV  EE+DW
Sbjct: 217 PCMVTYIQDIVMYPYWNVPQNIALDEMLPRMKRDLSYIYNQNLQILDAKNKEVDPEEIDW 276

Query: 289 NSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV-VRFETSGCVR 345
            S    NF +  RQ  G  N++   K    +    Y+HDT    LF +    + + GCVR
Sbjct: 277 ESLSETNFPYRVRQASGCENSLGLLKFNLANPLAIYLHDTNSRDLFKSTKDHWRSHGCVR 336

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V+  ++L   +L    T+    + + +  +K   +    + PV   Y  A       + F
Sbjct: 337 VQKPVELANLILG-AKTFDADFMNKCLIDQKPKTLP-TKKFPVFITYNIADVDAAGKLHF 394

Query: 406 RDDIY 410
            +D+Y
Sbjct: 395 YNDVY 399


>gi|315608208|ref|ZP_07883200.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315250177|gb|EFU30174.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 514

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 26/271 (9%)

Query: 174 RQLQVNLMRIKKLLEQKMG--LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
            ++  N+ R +  L+       +YVLVNIP+  L AV +G   L   V  G  + +TP+L
Sbjct: 242 AKILCNIERCRWRLKDYPQRYKKYVLVNIPSFKLCAV-DGDSVLEMRVGCGTFETKTPLL 300

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNS 290
           +S+I R+  NP W+IPRSI++K ++  +  D  Y +     + +   G+E+ +++     
Sbjct: 301 YSQIKRMDINPQWIIPRSIVKKSIIKHV-GDKNYFESRGYLIKNIHTGEEIDLDKASLGM 359

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            E   F   Q  GK N++      F +  + Y+HDTP    F+   R  + GC+RV+   
Sbjct: 360 LENREFAVIQRGGKGNSLGRIVFRFDNDFSVYLHDTPSRDFFSREDRGVSHGCIRVQKPF 419

Query: 351 DLDVWLLKDTPTWSRYHIE-------EVVKTRKTTPVKL--------------ATEVPVH 389
           +L  ++L +        I         + +  K   + +                +VP+ 
Sbjct: 420 ELAKFILGNANDELIRKIAYSIQADISIHRDDKNKSLPIDTLNRKLLIRTCYVKPKVPLF 479

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            +Y + +  K+ ++ F DD+YG D V    +
Sbjct: 480 IIYFTIYPDKNGVLTFYDDVYGYDQVIYRQL 510


>gi|307946680|ref|ZP_07662015.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307770344|gb|EFO29570.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 429

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 6/289 (2%)

Query: 20  LPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           L     +    +  + +++ +N         D F       +     D   +   +  + 
Sbjct: 142 LRYATHVSSGRVQPNKINKALNIFPDRPKAKDLFHALETTSNFSAFLDSLPLQTASYLRL 201

Query: 79  EKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           +  +  Y++  + GG+  +P    L        V  L+ERL+    L   +     ++  
Sbjct: 202 QIRLGEYREKAANGGFTSIPKGEVLKPEMIDPRVPTLKERLVQEDFLLAEQHSGSTYNGA 261

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  AVK FQ  HGL+  G++  STLEA+NV ++ R+ Q+++N+ R ++ +   +G  YV 
Sbjct: 262 LVEAVKNFQSYHGLEVDGIIGKSTLEALNVSINDRLIQMELNMER-RRWMPDNLGDTYVF 320

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VN+   +L+ V NGK    + VIVG+    TP+    +  +  NPYW +P SI  ++ + 
Sbjct: 321 VNLADQALKVVRNGKTWHTTPVIVGKPYHATPVFSDVMTYVEVNPYWNVPYSISTREYLP 380

Query: 258 LLRQDPQYL-KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            L+ +   L +  +  + + KG  VF  ++   S       F   PG  
Sbjct: 381 KLQANANALSEKKHAGISERKGSCVFKRQLV--SLFTAKLPFPAAPGPG 427


>gi|288925831|ref|ZP_06419762.1| putative periplasmic protein [Prevotella buccae D17]
 gi|288337486|gb|EFC75841.1| putative periplasmic protein [Prevotella buccae D17]
          Length = 505

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 26/271 (9%)

Query: 174 RQLQVNLMRIKKLLEQKMG--LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
            ++  N+ R +  L+       +YVLVNIP+  L AV +G   L   V  G  + +TP+L
Sbjct: 233 AKILCNIERCRWRLKDYPQRYKKYVLVNIPSFKLCAV-DGDSVLEMRVGCGTFETKTPLL 291

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNS 290
           +S+I R+  NP W+IPRSI++K ++  +  D  Y +     + +   G+E+ +++     
Sbjct: 292 YSQIKRMDINPQWIIPRSIVKKSIIKHV-GDKNYFESRGYLIKNIHTGEEIDLDKASLGM 350

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            E   F   Q  GK N++      F +  + Y+HDTP    F+   R  + GC+RV+   
Sbjct: 351 LENREFAVIQRGGKGNSLGRIVFRFDNDFSVYLHDTPSRDFFSREDRGVSHGCIRVQKPF 410

Query: 351 DLDVWLLKDTPTWSRYHIE-------EVVKTRKTTPVKLAT--------------EVPVH 389
           +L  ++L +        I         + +  K   + + T              +VP+ 
Sbjct: 411 ELAKFILGNANDELIRKIAYSIQADISIHRDDKNKSLPIDTLNRKLLIRTCYVMPKVPLF 470

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            +Y + +  K+ ++ F DD+YG D V    +
Sbjct: 471 IIYFTIYPDKNGVLTFYDDVYGYDQVIYRQL 501


>gi|255036894|ref|YP_003087515.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
 gi|254949650|gb|ACT94350.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
          Length = 398

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 4/238 (1%)

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTPILHSRIN 236
           +N  R     + +   R+VLVNI  A L A+++ G+  L    +VG+ D  TP + +   
Sbjct: 157 LNAYRW-IHRQIQGSPRFVLVNIRGAYLTAMDSAGQNVLTMRTVVGKRDTPTPTIDTYAT 215

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
            I+ +PYW +P+SI  K++      DP+YL  N I +I + G+ +  +E+DW       F
Sbjct: 216 SIVTHPYWNVPKSIAIKEIFPKAAADPEYLSRNRIQVIGKDGQAIDPQELDWGDLTAEKF 275

Query: 297 I--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
              FRQ+ G+ N++   K+E  +    Y+HDT    LF +  R+ + GCVRV+   DL  
Sbjct: 276 PYRFRQETGEDNSLGLLKVEIKNPLAIYLHDTNARYLFKSGQRWRSHGCVRVQYPTDLAN 335

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
           ++       S +  E    +      KL   +PV  +Y+ A       + +  D+Y  
Sbjct: 336 YMAGSKLLDSDFMTEPDSVSHPPKWHKLQVRIPVFLLYLPADCNPKGDLMYFPDVYKR 393


>gi|284038422|ref|YP_003388352.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
 gi|283817715|gb|ADB39553.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
          Length = 378

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 14/255 (5%)

Query: 167 VPVDLRIRQLQ--VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGR 223
           +   L I Q+Q  +N  R    L +    + ++VNIP+A+L  ++  GK  L S V+VG+
Sbjct: 122 MSDSLTIEQVQETLNTYR---WLNRFRNSKRIVVNIPSATLRVIDRQGKTLLNSRVVVGK 178

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ-YLKDNNIHMIDEKGKEVF 282
            D  TP+  + I  ++  PYW +PRSI+ K+M+  ++++P   L   N+ +ID KG+ V 
Sbjct: 179 ADTPTPLFTAFIPSLVMYPYWNVPRSIMVKEMLPRIQKNPALVLSFLNLDVIDAKGQVVD 238

Query: 283 VEEVDWNSPEPP------NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            + V+W+            +  RQ  G  NA+   K    S  + Y+HDT     F +  
Sbjct: 239 PKTVNWSVSASAVYNGSFPYRLRQATGCANALGVLKFNVNSPYDVYLHDTNARHAFASEN 298

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  + GC+RV    +L   LL  T  +S  ++    K      V+L   VPV   Y    
Sbjct: 299 RQLSHGCIRVEKPAELANLLLGYT-RFSDDYLTSCPKNASPKTVQLPVSVPVITTYNVLD 357

Query: 397 SPKDSIIQFRDDIYG 411
                 IQ   D+YG
Sbjct: 358 IDAAGAIQVYPDVYG 372


>gi|87198452|ref|YP_495709.1| hypothetical protein Saro_0427 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134133|gb|ABD24875.1| conserved hypothetical protein [Novosphingobium aromaticivorans DSM
           12444]
          Length = 499

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 105/256 (41%), Gaps = 18/256 (7%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-DRQT 228
             +   ++ N+ R +  L + +G +Y+L N+P   L      K+     VIVG+     T
Sbjct: 239 QKQAALIRANMDRWR-WLARDLGTQYLLANVPEQVLRLTVRNKIISTYKVIVGKPGKTAT 297

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMM-ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           P L   +  ++FNP W +P+SI+  + + A L  +P+  +     +       ++     
Sbjct: 298 PQLAETVEGVIFNPTWTVPQSIVVGEGLGARLVNNPRQAEREGYKVTKAGDGTIY----- 352

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                       Q PG  N++   K++  + +  ++HDTP   LFN   R  + GCVRV 
Sbjct: 353 ----------VVQQPGDNNSLGRMKLDMPNEHAIFLHDTPNRNLFNLPARALSHGCVRVE 402

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
              +L + +       +         ++  T V +    PV+  Y +     + +++   
Sbjct: 403 RATELAMTMAILGAGMTPDDAVAAHTSKVYTKVPMTKTFPVYLTYFTVARDVNGMLRSFP 462

Query: 408 DIYGLDNVHVGIIPLP 423
           DIY  D   +     P
Sbjct: 463 DIYNRDAPVLATFAQP 478


>gi|288928347|ref|ZP_06422194.1| lipoprotein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331181|gb|EFC69765.1| lipoprotein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 460

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 24/275 (8%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
               RIR L  N+ R +           +YVLVN+P+  L+A+E G   L   +  G +D
Sbjct: 185 SETDRIRLL-CNVERSRWRQTDYPQNHRKYVLVNVPSYHLDAIE-GDSVLTMRMACGTLD 242

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE-KGKEVFVE 284
            +TP+L+S I R+  NP W+IPRSII+K+++     +P Y + +   +++   G+ V   
Sbjct: 243 TKTPLLNSHIMRMDVNPQWIIPRSIIKKEVVGHA-GNPDYFERHRYFILNRPSGRRVDPA 301

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            V       P++   Q+ G+ N++      F +  + ++HDT     F+   R  + GC+
Sbjct: 302 NVSAGMLLNPDYFVIQEGGEGNSLGRVVFRFNNNFSIFIHDTSSKWAFDRGSRSVSHGCI 361

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP------------------VKLATEV 386
           RV+   +L V+LL          I   ++   + P                  VK+   V
Sbjct: 362 RVQKPFELAVFLLGKKDKTLIDKINYSMQADLSKPKEGEEKRTRVDYRRLVNSVKVNPNV 421

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           P+   Y + +      +    D+YG D V    + 
Sbjct: 422 PLFITYYTLYPDVKGKMHTYADVYGYDKVLYRYLR 456


>gi|326386118|ref|ZP_08207742.1| hypothetical protein Y88_2010 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209343|gb|EGD60136.1| hypothetical protein Y88_2010 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 505

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 18/255 (7%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-DRQTP 229
            +I  ++ N+ R +  L + +GL+Y+++N+P   L    N K+      IVGR     TP
Sbjct: 246 KQIAMIRANMDRWR-WLGRDLGLQYLIINVPEQELRLTVNNKIIRTYKAIVGRPGKTATP 304

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMAL-LRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
            L  ++  ++FNP W +P+SI+  + +   L   P   K             +       
Sbjct: 305 QLAEQVKNVVFNPTWTVPQSIVVGEGLGKDLIAHPAKAKRLGYVATQSADGTI------- 357

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                      Q PG  NA+   K++  + +  Y+HDTP   LFN   R  + GC+R   
Sbjct: 358 --------TVVQQPGNTNALGRVKLDMPNDHAIYIHDTPNRTLFNQPQRALSHGCIRAER 409

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
             +L + +             +   + K T V +A   PV+  Y +     + +++   D
Sbjct: 410 ATELAMTMAILGADLPPQTAVDYSLSGKYTKVPMAKPFPVYITYFTVARDVNGLMRSFPD 469

Query: 409 IYGLDNVHVGIIPLP 423
           +YG D   +     P
Sbjct: 470 LYGRDAKVIASFAQP 484


>gi|148554282|ref|YP_001261864.1| hypothetical protein Swit_1361 [Sphingomonas wittichii RW1]
 gi|148499472|gb|ABQ67726.1| Uncharacterized protein [Sphingomonas wittichii RW1]
          Length = 418

 Score =  240 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 65/254 (25%), Positives = 99/254 (38%), Gaps = 31/254 (12%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L+ NL R +  + + +G RY+ VNIP   L  + NG       V+VG     TP L   
Sbjct: 191 RLRANLERWR-WMPRDLGDRYIYVNIPGYRLSVINNGIEEASYNVVVGAPRTPTPQLELY 249

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
              I+ NP W +P SI++              +      I      V             
Sbjct: 250 AQSIVANPGWTVPHSIVK----------AGGTRGKGFRWIRNPDGSVSAW---------- 289

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
                Q PG  NA+   KI+  + +  Y+HDTP   +F    R  + GC+RV NI +L  
Sbjct: 290 -----QAPGPTNALGRIKIDMPNPHAIYLHDTPNRAVFARENRALSHGCIRVENIEELAA 344

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L              +    KT   +L   VPV+ VY +A +  D  ++   D YG D 
Sbjct: 345 MLQGGDGLD-----AALADPGKTKVFQLERSVPVYLVYFTAQADPDGTVRPLGDPYGRDK 399

Query: 415 VHVGIIPLPEDHPI 428
             +  +    +  +
Sbjct: 400 ALLAKLGAAMEGKL 413


>gi|294674104|ref|YP_003574720.1| lipoprotein [Prevotella ruminicola 23]
 gi|294472724|gb|ADE82113.1| putative lipoprotein [Prevotella ruminicola 23]
          Length = 496

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 27/293 (9%)

Query: 153 PSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNIPAASLEAVEN 210
           P   +  + L  M+      +  QL VN+ R +  +E      R +LVNIPA  L A++ 
Sbjct: 196 PDTYIYKALLREMDKTTNADKRHQLAVNMERCRWQIEHPKDVKRQILVNIPAQQLWAIDV 255

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
             V L   +  G V  +TP+LHS I+ +  NP WVIP++I++ +++     D  Y   N 
Sbjct: 256 DSV-LDMRICCGAVPTKTPLLHSAISYMQVNPEWVIPQNIVKTEVV-HHAGDSAYFARNR 313

Query: 271 IHMIDE-KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
             +ID+  G  + V  V  N+         Q  G  N++        +  + Y+HDT   
Sbjct: 314 YSVIDKESGDTLNVASVGANALLSGKLRISQKGGVGNSLGRIVFRSQNDFSIYLHDTNNR 373

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT----------- 378
             F    R  + GCVRV+   +L  +LL D   W+   +   +     T           
Sbjct: 374 SAFQRDRRTLSHGCVRVQKPFELASFLLSDVDEWTLESLRISMDIPPVTDRGREWLHKHA 433

Query: 379 ----------PVKLATEVPVHFVYISAWSPKD-SIIQFRDDIYGLDNVHVGII 420
                        +   VP++ +Y + +       I +  D+YG D V    +
Sbjct: 434 DAPHPYRLISYHAVKPHVPLYILYYTTFPNPKTGAIDYWPDLYGFDKVISKEL 486


>gi|261880240|ref|ZP_06006667.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270333074|gb|EFA43860.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 458

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 70/289 (24%), Positives = 123/289 (42%), Gaps = 33/289 (11%)

Query: 165 MNVPVDLRIRQ--LQVNLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           +  P   R+++  + VN+ R +  ++       +YVLVNIP+  L AV+  KV L   + 
Sbjct: 170 LQSPGLSRMQRNRILVNMERCRWRMQDNPQRHEKYVLVNIPSFHLRAVDGDKV-LTMRIA 228

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE-KGK 279
            G    +TP++ S I R+  NP WV+P+SI++K ++  L  +  Y   N   + +   G+
Sbjct: 229 FGSNKNKTPLIVSAIKRMDVNPQWVMPKSIVRKSVVPQL-GNINYFTQNRYFIRNRQTGE 287

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            V V  V     E  ++   Q  G+ NAM      F +  + Y+HDT    +F+  VR  
Sbjct: 288 HVDVSSVSPEMLESGDYFVIQRGGEGNAMGRIVFRFDNNLSIYLHDTSSRTIFDRSVRNV 347

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV--------------------------K 373
           + GC+RV    +L  ++L          I   +                          +
Sbjct: 348 SHGCIRVEKPFELSKFVLAKKDDKLVDRINYSMHADVSPVNMKKEEMTERMMLVADTLDR 407

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +R    V +   VP+  +Y + +      I+   D+YG D++    +  
Sbjct: 408 SRLIGSVNIKPMVPIFILYYTMYPDASGKIETFSDVYGYDSLIYQQLRN 456


>gi|281422421|ref|ZP_06253420.1| putative cell wall degradation protein [Prevotella copri DSM 18205]
 gi|281403484|gb|EFB34164.1| putative cell wall degradation protein [Prevotella copri DSM 18205]
          Length = 451

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 13/270 (4%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTV 219
           L+A  +   +RI+ L  N+ R +           +YV+VNIP+  L A+++ +  L   +
Sbjct: 182 LKAGGLGKAMRIKIL-CNMERCRWRQYDNPWQHEKYVVVNIPSFHLLAIDH-QDTLSMRI 239

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKG 278
             G    +TPIL+S I R+  NP W +PRSI+  DM+  +  +  Y +  N ++ +   G
Sbjct: 240 GCGASKTKTPILNSHIKRMELNPQWFVPRSIVLHDMIHRV-GNHGYFRARNYYVREVATG 298

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           KEV ++ V  +      +   Q  GK NA+      F +  + ++HDT    +F    R 
Sbjct: 299 KEVDLDRVTRSMLISGAYGIAQRGGKGNALGRIIFRFDNNFSVFLHDTNSKGVFGQEDRG 358

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHI-----EEVVKTRK--TTPVKLATEVPVHFV 391
            + GC+R+    D  V+LL D     +  I      + +  +K     VK+  +VP+   
Sbjct: 359 VSHGCIRIEKPYDFAVFLLADKNEKLKEKIYYSMTADSLANKKLVVNNVKVNPQVPLFIT 418

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           Y + +      I    D+YG D +   ++ 
Sbjct: 419 YYTLYPLAGGRIADYSDVYGFDAIIFDMLR 448


>gi|103486925|ref|YP_616486.1| hypothetical protein Sala_1440 [Sphingopyxis alaskensis RB2256]
 gi|98977002|gb|ABF53153.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
          Length = 409

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 97/251 (38%), Gaps = 17/251 (6%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            + ++VN+ R +  + + +G RYV+ N+P      V  G V      +VG+    TP L+
Sbjct: 142 AQAIRVNMERWR-WMPRDLGERYVVSNVPEYLTRVVHGGTVIATHKAVVGKKSTPTPQLN 200

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
                I+ NP W +PRSII + + A + ++P   +                      +  
Sbjct: 201 PMATGIIVNPNWTLPRSIINEGIGATIARNPAAARAQGYT----------------WTGS 244

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                  Q PG  NA+   K+E  + +  Y+HDTP    FN   R  + GC+R    +  
Sbjct: 245 GKTLSVVQKPGPNNALGVMKMEMLNEHAIYLHDTPSKNAFNAAARAFSHGCIRTERALHF 304

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              +       S     E + + KTT        PV+  Y +        ++   D+Y  
Sbjct: 305 SGLMAVMFAGRSPEEFGEAIASGKTTRFGFDQPFPVYVAYWTVVPDGKGGVKKLADLYER 364

Query: 413 DNVHVGIIPLP 423
           D   V     P
Sbjct: 365 DAPVVASFARP 375


>gi|323345681|ref|ZP_08085904.1| cell wall degradation protein [Prevotella oralis ATCC 33269]
 gi|323093795|gb|EFZ36373.1| cell wall degradation protein [Prevotella oralis ATCC 33269]
          Length = 507

 Score =  235 bits (601), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 28/277 (10%)

Query: 171 LRIRQLQVNLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            RI+ L  N+ R +  L        +YVLVNIP+  L AV+   V L   +  G ++ +T
Sbjct: 231 ERIKML-CNMERCRWRLYDYPWRHRKYVLVNIPSFHLRAVDQDSV-LEMKIGCGSLETKT 288

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-KEVFVEEVD 287
           P+L SRI R+  NP WVIPRSI++K +      D  Y   +  ++ + K  K + V  V 
Sbjct: 289 PLLTSRIMRMDLNPQWVIPRSIVRKSIANHA-GDSAYFASHRYYVRERKTIKRIPVSLVS 347

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
            +     ++   Q+ G+ NA+      F +  + ++H T  P +F    R  + GCVRV 
Sbjct: 348 RSMLNSSDYFVIQEGGEGNALGRIIFRFNNNFSVFLHYTSAPGVFEQSSRDVSHGCVRVE 407

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVV----------------------KTRKTTPVKLATE 385
             +DL V+LLK+        I   +                      K++    +K+  E
Sbjct: 408 KPLDLAVFLLKNKDEKIIEKIRYSMTVDLGNQRDKGQRGVEFRPPVDKSKLIGSLKVEPE 467

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           VP+   Y + +  +   ++   D+YG D V    +  
Sbjct: 468 VPLFITYYTLYPDRYGQLEEFPDVYGYDRVIYNYLGN 504


>gi|197105408|ref|YP_002130785.1| hypothetical protein PHZ_c1945 [Phenylobacterium zucineum HLK1]
 gi|196478828|gb|ACG78356.1| hypothetical protein PHZ_c1945 [Phenylobacterium zucineum HLK1]
          Length = 483

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 14/252 (5%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           R +  N+ R +  L + +G R++LVN  +A L   E+G+   R  VIVGR    TP +  
Sbjct: 231 RLILANMDRARG-LPRALGPRFILVNAASAELRVYEDGEEVDRMPVIVGRPSAATPPMAG 289

Query: 234 RINRIMFNPYWVIPRSIIQKDMMAL-LRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWN 289
            I    F PYW +P  +++++     LR+ P +L       + +     + +   E+DW 
Sbjct: 290 VIRYARFRPYWNLPEGMVREEFAPRVLREGPGFLAAAGFEALSDWSPQARVLDPAEIDWR 349

Query: 290 SPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
           +      +   RQ PG  N + + K+   +    Y+HDTP+   F    R  ++GC+R+ 
Sbjct: 350 AVARGERSLRLRQSPGPGNILGNVKLMLPNHLGIYLHDTPDKASFRRSRRTLSAGCIRLA 409

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
           +   L   LL+    W      E         V L   VPV+ +Y++A   +   +    
Sbjct: 410 DADRLTRRLLE----WEE---GERPPEGLNQRVDLPRGVPVYILYLTAERGEGGEVLRHP 462

Query: 408 DIYGLDNVHVGI 419
           D+YG D+  +  
Sbjct: 463 DLYGRDSQVIAA 474


>gi|282877810|ref|ZP_06286623.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
 gi|281300126|gb|EFA92482.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
          Length = 361

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 32/272 (11%)

Query: 174 RQLQVNLMRIKKLLEQKMG--LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R++  NL R +  L+ + G   +Y L+N+P+  L A ++ K  L   + +G +D +TP++
Sbjct: 82  RKVICNLERARWRLDDEPGKHEKYALINLPSMHLMARDHDK-TLSMRIGIGALDTKTPLI 140

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNS 290
            SRI R+  NP WV+PRSII+K ++     +  Y       + + K GK + V +V  + 
Sbjct: 141 TSRIVRMDVNPQWVMPRSIIEKSVVPQA-GNKDYFDARRYFIRERKTGKRMDVTQVSADM 199

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            +  N+   Q+ GK NAM      F ++   Y+HDT    +F    R  + GC+R+    
Sbjct: 200 LKSGNYFVIQEGGKGNAMGRIVFRFKNKFAIYLHDTSSKGVFEREDRGVSHGCIRLEKPF 259

Query: 351 DLDVWLLKDTPTWSRYHIEEVV---------------------------KTRKTTPVKLA 383
           D  V+LL D    +   I   +                           + +    V++ 
Sbjct: 260 DFAVFLLNDKDEKTIERIRYSMEADIHSTYMDDNPSSDKKPSMETNKLDRAKLIKSVQVK 319

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             VP+   Y + +  +++++    D+YG D+V
Sbjct: 320 PTVPLFITYYTLYPNENNVMTEYPDVYGFDSV 351


>gi|282879885|ref|ZP_06288612.1| conserved domain protein [Prevotella timonensis CRIS 5C-B1]
 gi|281306279|gb|EFA98312.1| conserved domain protein [Prevotella timonensis CRIS 5C-B1]
          Length = 491

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 29/269 (10%)

Query: 179 NLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
           NL R +  L+  +    +YV+VNIPA  L A+++ +  +R  V VG    +TP+L SRI 
Sbjct: 220 NLERTRWRLKDNLFAQDKYVMVNIPAMELLAIDH-EQVMRMRVGVGTNTTKTPLLSSRIM 278

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEEVDWNSPEPPN 295
           R+  NP WV+P+SII K  +A    D  Y +++   + +   G  V   +V         
Sbjct: 279 RMDVNPQWVMPKSIIDKS-VARHAGDSAYFENHRYFIRNRETGNRVDPRQVTSEMLRSGQ 337

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +   Q+ GK NAM      F +    Y+HDT    +F+   R  + GCVRV    +L V+
Sbjct: 338 YFVIQEGGKGNAMGRIVFRFKNNFAVYLHDTSSRGVFDQSNRGVSHGCVRVEKPFELAVF 397

Query: 356 LLKDTPTWSRYHIEEVV------------------------KTRKTTPVKLATEVPVHFV 391
           LLKD        +   +                        +++    V++   VP++  
Sbjct: 398 LLKDKDEELIEKMRYSMQADIHSHYQKKLTATSNLPNDTLQESKLINSVRVQPAVPLYIT 457

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           Y + +  +   ++   DIYG D V    +
Sbjct: 458 YYTLYPNEQHGMREYQDIYGFDAVIYKQL 486


>gi|148553414|ref|YP_001260996.1| hypothetical protein Swit_0490 [Sphingomonas wittichii RW1]
 gi|148498604|gb|ABQ66858.1| Uncharacterized protein [Sphingomonas wittichii RW1]
          Length = 572

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 21/254 (8%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
                +++L++NL R + L       R+V+V+  +A L   E GK      V+VG  + +
Sbjct: 333 SPRETVQRLRLNLDRARLLPG--PWTRHVVVDAASARLWYYEGGKQRAMMRVVVGAPETE 390

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD--PQYLKDNNIHMIDEKGKEVFVEE 285
           TP+L   +   + NPYW +P  +IQ+ +   +     P  L+   +       + +  +E
Sbjct: 391 TPMLAGMVRYAVLNPYWNVPDYLIQRRLAPKIVAGATPASLRMEVLSDWSASPRRLAGDE 450

Query: 286 VDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
           VDW +          RQ PG+ NAM   K  F +    Y+HDTP+  L +   R  ++GC
Sbjct: 451 VDWPAVAAGRKLVRMRQLPGRDNAMGRVKFIFPNDLGIYLHDTPDKGLLSKADRHLSNGC 510

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK---TTPVKLATEVPVHFVYISAWSPKD 400
           +R           L+D P   R      +          V L   +PV+  YI+A   + 
Sbjct: 511 IR-----------LQDAPGLYRLMFGRPLPAASKQPERDVALPAPIPVYLTYITATPTER 559

Query: 401 SIIQFRDDIYGLDN 414
             I F  D+YG D 
Sbjct: 560 G-IGFLKDVYGRDE 572


>gi|240142210|ref|YP_002966720.1| hypothetical protein MexAM1_META2p0532 [Methylobacterium extorquens
           AM1]
 gi|240012154|gb|ACS43379.1| Hypothetical protein MexAM1_META2p0532 [Methylobacterium extorquens
           AM1]
          Length = 290

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 101/223 (45%), Gaps = 8/223 (3%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R V+VN+    L A  +G+  L S V+VGR    TP L + +  +  NP W +P +I++ 
Sbjct: 66  RLVVVNVAGRFLAAYRDGEPELESRVVVGRDGWHTPDLATSVASVTLNPTWTVPETILRD 125

Query: 254 D-MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           +     L  DP + + N   ++   G+ V  + V   + E       Q PG  NA+   K
Sbjct: 126 EGWRGELASDPGWAERNGFDVLLG-GRRVAADRV--GTAELLKATLVQRPGADNALGRMK 182

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
           I   +  + Y+HDT EP  F++     + GCVRV   ++L  W+L      S   + ++V
Sbjct: 183 IAMRNAGSIYLHDTNEPGGFDDPGHSGSHGCVRVELALELATWVL----GASGPEVADLV 238

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
               T        VPV F Y +AW      + +  DIY  D  
Sbjct: 239 LGGSTIVRTTPEPVPVVFGYFTAWPDAVGRVAYYPDIYRRDAA 281


>gi|204789654|gb|ACI02035.1| hypothetical protein [uncultured bacterium]
          Length = 397

 Score =  213 bits (543), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 5/191 (2%)

Query: 175 QLQVNLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           ++ VN+ R +           +YVLVNIP+  L A++  +  L   +  G    +TPIL+
Sbjct: 209 KILVNMERCRWREADSPARHKKYVLVNIPSFHLYAIDE-QDTLAMKIGCGSTKTKTPILN 267

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSP 291
           S I R+  NP W +PRSI+ KDM+     +P Y    N ++ D   G+EV   +V     
Sbjct: 268 SYIKRMDLNPKWFVPRSIMVKDMV-HHAGNPAYFNARNYYISDRSTGEEVNPAQVTRTML 326

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +   Q  GK N++      F +  + Y+HDT    +F+   R  + GC+RV    +
Sbjct: 327 LSGKYGVVQRGGKGNSLGRIIFRFDNNFSVYLHDTSSQAVFSREDRDVSHGCIRVEKPFE 386

Query: 352 LDVWLLKDTPT 362
           L  +LL +   
Sbjct: 387 LAKFLLHEKNE 397


>gi|218458505|ref|ZP_03498596.1| hypothetical protein RetlK5_03208 [Rhizobium etli Kim 5]
          Length = 239

 Score =  196 bits (498), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 17/229 (7%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSVSVQRLRERLIISGDLD---- 125
                 +  +A  +     G   ++ +     L  G+SS  +  + + +   G       
Sbjct: 14  PQFEALKAELAKLRA-ADGGNEGQIVVSLSGLLRPGDSSPEIANIVKAVQKHGSETLRTD 72

Query: 126 -----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQV 178
                 +      +   + + V+ FQ   GL   G++  +T+ AM        +I +L+V
Sbjct: 73  HAATFAAYAGGSDYSPEIVALVEDFQKERGLKADGVIGQATVRAMTGGDTNASKIDKLEV 132

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
            + + +  L + +G RYV++N PA      ++GK  L   V+VG  + QT   +  I  +
Sbjct: 133 AMEQAR-WLPEDLGSRYVMINQPAYMAYYHDDGKEQLSMRVVVGGKNNQTYFFNDEIETV 191

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
            FNP+W +P+SII  +M+  LR DP YL      +    G  V    VD
Sbjct: 192 EFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-RVNGHAVASSSVD 239


>gi|163759200|ref|ZP_02166286.1| hypothetical protein HPDFL43_05530 [Hoeflea phototrophica DFL-43]
 gi|162283604|gb|EDQ33889.1| hypothetical protein HPDFL43_05530 [Hoeflea phototrophica DFL-43]
          Length = 125

 Score =  190 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 63/120 (52%), Positives = 91/120 (75%)

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
           +FRQDPGK NAM+STKI F++ +  YMHDTP+  +FN ++RFE+SGCVRV+N+ DL+ WL
Sbjct: 1   MFRQDPGKGNAMSSTKINFHNPHAVYMHDTPQQGVFNQLMRFESSGCVRVQNVRDLNTWL 60

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           L+DTP W+R  IE  + + ++T + L+  VPV+F Y +AW+ +D ++QFRDD+Y  D V 
Sbjct: 61  LRDTPGWNRQAIEATIASGESTEILLSEPVPVYFTYFTAWASEDGVVQFRDDVYQRDGVE 120


>gi|218680582|ref|ZP_03528479.1| Peptidoglycan-binding domain 1 protein [Rhizobium etli CIAT 894]
          Length = 150

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 84/132 (63%), Positives = 103/132 (78%), Gaps = 1/132 (0%)

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            E +DWN  E PN +FRQDPGK NAMASTKI FY++N  YMHDTP+  LFN ++RFE+SG
Sbjct: 3   PETIDWNG-EAPNLMFRQDPGKTNAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSG 61

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           CVRV+N+ DL  WLL++TP W+R  +E+V+ T   TPVKLATEVPV+FVYISAW   D I
Sbjct: 62  CVRVQNVRDLSNWLLRETPGWNRQQMEQVIATGVNTPVKLATEVPVYFVYISAWGMPDGI 121

Query: 403 IQFRDDIYGLDN 414
           +QFRDDIY +D 
Sbjct: 122 VQFRDDIYQMDG 133


>gi|218515096|ref|ZP_03511936.1| hypothetical protein Retl8_16076 [Rhizobium etli 8C-3]
          Length = 152

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 5/150 (3%)

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            G  V    VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +
Sbjct: 3   NGHAVASSSVDWYG-STDNVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDM 61

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  + GCVR+ N   +   +L      +   + + + + +   V++  ++PV+  Y +AW
Sbjct: 62  RALSHGCVRLSNPRAMAAAVLGT----TVDDVAKQIASGQNHAVRVPQKIPVYVSYFTAW 117

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
             K+ ++++ DD+YG D             
Sbjct: 118 PNKEGVVEYFDDVYGRDAYVEKAFDATTKA 147


>gi|312890410|ref|ZP_07749947.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311297180|gb|EFQ74312.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 436

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 31/206 (15%)

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T  A  +  +   R + VNL R++    +    +YVLVNIP   L  ++NGK  L   V
Sbjct: 234 GTTAAPGMSAEETQRAILVNLERLR-WKNKPSESKYVLVNIPDYQLNFMDNGKSILNMKV 292

Query: 220 IVG---------------------RV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
            VG                     R   R+TP L+S I     NP W IP+SI  K+++ 
Sbjct: 293 CVGEGRNKDHSHNLVEYDDSYQIDRPFSRETPQLNSMIYVAEVNPVWNIPQSIASKEIIV 352

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP---NFIFRQDPGKINAMASTKIE 314
              +DP YL + NI +     +    E + W +       ++ F+Q PG  N++   K  
Sbjct: 353 EAAKDPYYLSNKNIVVYKGGQEVEDPETIKWATLSENEKASYSFKQKPGDDNSLGKIKFL 412

Query: 315 FYSRNNTYMHDT---PEPILFNNVVR 337
           F +  N Y+  T   P   L N   R
Sbjct: 413 FKNSTNVYL--TILRPSRHLLNRCGR 436


>gi|254501948|ref|ZP_05114099.1| hypothetical protein SADFL11_1986 [Labrenzia alexandrii DFL-11]
 gi|222438019|gb|EEE44698.1| hypothetical protein SADFL11_1986 [Labrenzia alexandrii DFL-11]
          Length = 522

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 77/429 (17%), Positives = 143/429 (33%), Gaps = 19/429 (4%)

Query: 10  ILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVDMGIDSDIP 68
            +   F    L     L    +   VL        H+    D      A   +     I 
Sbjct: 100 WIELLFTGHFLDFANDLRAGRVTPRVLYPGAYMPVHTINGTDALKRLAAAPQLLDFVSIW 159

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
               +T    +  +     +   GG+  L I+  L  G     V  LR R+   G L   
Sbjct: 160 EPQDDTYRLLKTHLERLYAVKDDGGFTYLDIQEELSPGAQGDQVPDLRRRMFEDG-LVGE 218

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                 FD  +  AV   + R+ L  S  V    + A+N+P++ RI Q+   + RI+ + 
Sbjct: 219 GTGGELFDKRLAFAVAQSKHRYVLPVSSEVTPRLIRALNIPIERRIEQVSNAMERIRWIP 278

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +     + +N         E+G+V +         DR      + I  + F+P W +P
Sbjct: 279 P-EFSRVKLFINKGENQFVFSESGRVVMEGQAFANCPDRNHANTATAIEAVTFHPTWQVP 337

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP-------NFIFRQ 300
              +  +++  L+ DP  ++    ++   KG +V +  + W    P         F    
Sbjct: 338 LEFLGNELLPRLKDDPTEVEGVGYYL-RRKGADVPLSSLPWGQATPRAINRFKDEFNLYL 396

Query: 301 DPGKINAMASTKIEFY--SRNNTYMHDT-PEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
                N + S         +   +  D+ PE  +F N      +    + + + L   ++
Sbjct: 397 PASDENPLGSYAFRLRQEQKLALFHLDSAPEDGVFCNPY--LPANAFGIVDGLALLEQVI 454

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           +    +    IE  +    T      + +     + S W      I+F  D Y  D+   
Sbjct: 455 EPRV-FPAEGIENRLARGDTITFPARSGLMAVATHQSVWLQYQGAIRFGHDPYLEDSRLT 513

Query: 418 GII-PLPED 425
             +   P+ 
Sbjct: 514 AALSGRPKP 522


>gi|46204583|ref|ZP_00209472.1| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 259

 Score =  149 bits (376), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISG 122
           +  +P  + +T  +T +A   YQ     GGW  LP       G+S  ++  LR  L ++G
Sbjct: 124 EDPLPTFTAQTFVETMRAAERYQVYAEAGGWKTLPADFAPKPGDSHPAIPSLRHHLTLTG 183

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL      S  +D  + +AVK FQ RHGL  +G+    TL A+NVP ++R RQL+ +  R
Sbjct: 184 DLPADAPPSDRYDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPAEVRQRQLRASAQR 243

Query: 183 IKKLLEQKMGLRYVLVN 199
           +        G RYV VN
Sbjct: 244 LMG-SSFAFGERYVTVN 259


>gi|262361435|gb|ACY58156.1| hypothetical protein YPD4_1248 [Yersinia pestis D106004]
          Length = 412

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/279 (21%), Positives = 100/279 (35%), Gaps = 54/279 (19%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHS---IVN 49
           M+GYL          +  LY    Y +     +++        ++E    SY +     +
Sbjct: 138 MLGYLHFISGVGANGSVWLYSNVPYKMAMPPAAVLN--AWQKAVNEGSTASYLASLAPQH 195

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKA-----IAFYQDILSRGGW--PELPIR-P 101
            ++D     + + +    P     T            I   ++IL R G   P  P++ P
Sbjct: 196 PQYDKMQQALKLMLADRRPWPQMPTGPSLRPGQLSDDIPALREILDRTGMLHPTTPVKAP 255

Query: 102 LHLGNSSVSVQRLRERLII-----------------------SGDLDPSKG--------L 130
             +   + +V  + + L +                       S D  P+           
Sbjct: 256 EVIPVENPTVAVVNDDLSVDEEKNRTQTNSLVVSPSAVSVPESDDAAPAPMPPVSVVTLT 315

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
              +   +  AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L    
Sbjct: 316 DNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGHV 375

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
                ++VNIP  SL   ++G   L S VIVGR  R+TP
Sbjct: 376 --DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTP 412


>gi|254489086|ref|ZP_05102290.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
 gi|214042094|gb|EEB82733.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
          Length = 236

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 78/217 (35%), Gaps = 44/217 (20%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +LVNIPA  L A + G   LRS +IVG    +TP L + ++ + F P W    S+I    
Sbjct: 61  ILVNIPAFELIAFDRGVPVLRSRIIVGTPWHRTPRLTTYVSAVRFRPTWRPTPSMI---- 116

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                   +Y                      W             PG+ N +    I  
Sbjct: 117 -----ASGEYADR------------------VW------------PPGRNNPLGLVAIRL 141

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
                 Y+HDT     F+   R  + GCVRV+    L  ++L          +  +   R
Sbjct: 142 QPGLLVYLHDTNHREKFDQEYRALSHGCVRVQQWDRLVAFVL----GIDLAEVHRLANGR 197

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
           +T  V  A  +PV   Y + +      I    DIY L
Sbjct: 198 ETFDVP-APPIPVTLGYFTRFPNAAGQIVDHPDIYRL 233


>gi|289808938|ref|ZP_06539567.1| hypothetical protein Salmonellaentericaenterica_32767 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 108

 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           MHDTP   LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +
Sbjct: 1   MHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNI 59

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 60  RQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 90


>gi|312885582|ref|ZP_07745218.1| conserved hypothetical protein [Mucilaginibacter paludis DSM 18603]
 gi|311301894|gb|EFQ78927.1| conserved hypothetical protein [Mucilaginibacter paludis DSM 18603]
          Length = 468

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 103/259 (39%), Gaps = 19/259 (7%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            +  +R++ VN+ R++ +     G  Y+ +NIP+ +L+    G   +   V VG+  R+T
Sbjct: 211 PEASLRRVAVNMERLRWMPVN--GRTYIQINIPSLTLKLHR-GDTDISYRVAVGK--RET 265

Query: 229 PIL--HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE-- 284
           P L     +  I+  P   +P     +  +     +   ++++   + D  GK +     
Sbjct: 266 PALMASGALTSIVVGPP--VPD---NRRWLPPSISNISSVEEHGFQVYDRNGKWIDPTVA 320

Query: 285 EVDWNSPEPPNFIFRQDP--GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            +      P  +     P  G          +       ++      +L+       ++G
Sbjct: 321 NIKMARQNPAKYKLISAPAVGPGKGSGIL-FKMNGIAGVHLLGCTGGLLYKPRQPATSNG 379

Query: 343 CVRVRNIIDLDVWLLK-DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
            +++    +L   LLK D    S   +  V+  ++ +  +    +PV+  Y++    KD 
Sbjct: 380 TIQLVQAENLADALLKGDNSLHSAEQLHRVIARKERSNYRFKKPMPVYITYLTCAV-KDG 438

Query: 402 IIQFRDDIYGLDNVHVGII 420
           +++  +D+Y  D+    ++
Sbjct: 439 LLETYEDVYHKDDHLASVM 457


>gi|330860173|emb|CBX70494.1| hypothetical protein YEW_AT04130 [Yersinia enterocolitica W22703]
          Length = 132

 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           IVGR  R+TP++ S +N ++ NP W +P S++++D++   R D  Y + +   ++     
Sbjct: 2   IVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKARYDSSYFQRHGYTVLSGWSN 61

Query: 280 E---VFVEEVDWNSPEPPNFIF--RQDPGKINAMA 309
           +   V    +DW+   P NF +  RQ PG  N++ 
Sbjct: 62  DAEVVDPSMIDWSMISPNNFPYRLRQAPGASNSLG 96


>gi|218659271|ref|ZP_03515201.1| hypothetical protein RetlI_06191 [Rhizobium etli IE4771]
          Length = 211

 Score =  124 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 75/189 (39%), Gaps = 18/189 (9%)

Query: 55  FLARVDMGIDSDIPIISKE--TIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSV 109
            LAR+     + I   S +       +  +A  +     G   ++ +     L  G+SS 
Sbjct: 25  KLARMSPDTGAYIASRSPDSPQFEALKAELAKLRA-ADGGNEEQIVVSLSGLLRPGDSSP 83

Query: 110 SVQRLRERLIISGDLD---------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  + + +   G             +      +   + + V+ FQ   GL   G++  +
Sbjct: 84  EIANIVKAVQKHGSETLRTDHAATFAAYAGGSDYSPEIVALVEDFQKERGLKADGVIGQA 143

Query: 161 TLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           T+ AM        +I +L+V + + +  L + +G RYV++N PA       +GK  L   
Sbjct: 144 TVRAMTGGDTNASKIDKLEVAMEQAR-WLPEDLGSRYVMINQPAYMAYYHNDGKEQLSMR 202

Query: 219 VIVGRVDRQ 227
           V+VG  + Q
Sbjct: 203 VVVGGKNNQ 211


>gi|261213952|ref|ZP_05928233.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915559|gb|EEX82420.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 527

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 17/225 (7%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 250 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 308

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 309 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 366

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 367 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 426

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
           ++  L    G RYV+VN PA      E+G+  L   V++G    +
Sbjct: 427 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHR 470


>gi|260754701|ref|ZP_05867049.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|260674809|gb|EEX61630.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
          Length = 527

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 17/225 (7%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 250 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 308

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 309 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 366

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 367 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 426

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
           ++  L    G RYV+VN PA      E+G+  L   V++G    +
Sbjct: 427 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHR 470


>gi|260757925|ref|ZP_05870273.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260761747|ref|ZP_05874090.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260668243|gb|EEX55183.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260672179|gb|EEX59000.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 527

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 17/225 (7%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 250 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 308

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 309 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 366

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 367 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 426

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
           ++  L    G RYV+VN PA      E+G+  L   V++G    +
Sbjct: 427 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHR 470


>gi|260883727|ref|ZP_05895341.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260873255|gb|EEX80324.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
          Length = 517

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 17/225 (7%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 240 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 298

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 299 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 356

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 357 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 416

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
           ++  L    G RYV+VN PA      E+G+  L   V++G    +
Sbjct: 417 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHR 460


>gi|260545357|ref|ZP_05821098.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
 gi|260096764|gb|EEW80639.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
          Length = 517

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 17/225 (7%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-- 73
               L   +   E  I A  L    +     +        LAR +    + +     +  
Sbjct: 240 SARALRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLAR-ESDPSAYLHGFQPDNA 298

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVS---VQRLRER------LIISGD 123
             A  ++A+A  +    RG    +     +  G+ S     V  L  R      L    D
Sbjct: 299 QYAALKRALADTE--PPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRD 356

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMR 182
           +  +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R
Sbjct: 357 VLAAHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMER 416

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
           ++  L    G RYV+VN PA      E+G+  L   V++G    +
Sbjct: 417 LR-WLPHDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHR 460


>gi|307946679|ref|ZP_07662014.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307770343|gb|EFO29569.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 97

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 1/91 (1%)

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           +FN   R  + GC+RV    DL   LL     +S+  +E++   +K T +KL   + VH 
Sbjct: 1   MFNRAQRDFSHGCIRVAKPFDLGDVLLSP-EGYSKGKLEKIRDGQKRTVIKLNKPLKVHL 59

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            Y++AW  KD    FR DIY  D V +  + 
Sbjct: 60  TYLTAWMNKDGSTHFRRDIYSRDAVLLKALR 90


>gi|330860174|emb|CBX70495.1| hypothetical protein YEW_AT04140 [Yersinia enterocolitica W22703]
          Length = 112

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           +      +   +  AVK FQ  HGL   G++ + T E +NV    R   L +N+ R++ L
Sbjct: 15  ATVTDNVYTPELMEAVKRFQRWHGLSDDGVIGARTREWLNVSPQTRATLLALNIQRLRIL 74

Query: 187 LEQKMGLRYVLVNIPAASLEAVEN 210
             +      ++VNIP  SL   + 
Sbjct: 75  PGRV--DNGIMVNIPNYSLNYYKK 96


>gi|312890411|ref|ZP_07749948.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311297181|gb|EFQ74313.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 91

 Score =  104 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 40/85 (47%)

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
           +R  + GCVR+   +D    L  D+  +       V    + T + L  +VPV+  Y + 
Sbjct: 1   MRAVSHGCVRLEKPLDFAHALFGDSAKYKTIEKCIVEDNPEPTSLSLNNKVPVYITYFTC 60

Query: 396 WSPKDSIIQFRDDIYGLDNVHVGII 420
           WS     +QFR DIYGLD V    +
Sbjct: 61  WSDDSGTLQFRKDIYGLDIVLYAHL 85


>gi|218458323|ref|ZP_03498414.1| hypothetical protein RetlK5_02246 [Rhizobium etli Kim 5]
          Length = 90

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV+N+ DL  WLL++TP WSR  +E+V+ +   TP+KLA EVPV+FVYISAW   D 
Sbjct: 1   GCVRVQNVRDLTNWLLRETPGWSRQQMEQVIASGVNTPIKLAAEVPVYFVYISAWGMPDG 60

Query: 402 IIQFRDDIYGLDN 414
           I+QFRDDIY +D 
Sbjct: 61  IVQFRDDIYQMDG 73


>gi|330860172|emb|CBX70493.1| hypothetical protein YEW_AT04120 [Yersinia enterocolitica W22703]
          Length = 85

 Score = 92.2 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           +    DL   LL+D   W+   +   +K   TT V +   VPV   Y++AW   D   QF
Sbjct: 1   MNKASDLANMLLQDA-GWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQF 59

Query: 406 RDDIYGLD 413
           R DIY  D
Sbjct: 60  RTDIYNYD 67


>gi|31790351|gb|AAP58608.1| hypothetical protein [uncultured Acidobacteria bacterium]
          Length = 335

 Score = 91.0 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 70/229 (30%), Gaps = 44/229 (19%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                    + +N+P   L   +NGK      + VG  +    I       I++NP W+ 
Sbjct: 81  FAPDQPDIRLTLNVPTFRLTLWQNGKEVKSYYIGVGMKEHPLDIGAREAREIIWNPAWIP 140

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P S   ++M                       K V   EV             +     N
Sbjct: 141 PPSDWVREM-----------------------KGVSPGEV------------IKASDPRN 165

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDV-WLLKDTPTW 363
            +   KI        +          ++V    + GCVR+      DL    +   +   
Sbjct: 166 PLGKLKIPLGDSYLIHQ----ARGW-SDVGNLVSHGCVRMPRPELYDLADKIVAARSLPV 220

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
           S   IE    + KT  V+  + + V   Y +    +D  +    D+YG 
Sbjct: 221 SSKRIEAAKHSFKTLVVRFDSPLSVDINYDTM-VIEDGTLHLYPDVYGR 268


>gi|296132569|ref|YP_003639816.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR]
 gi|296031147|gb|ADG81915.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR]
          Length = 279

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 48/137 (35%), Gaps = 19/137 (13%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S   V+ ++ERL+  G       +   FD    +AV  FQ   GL   G+V   T  A+ 
Sbjct: 16  SGPDVKAVQERLVDLGYYKG--RVDGVFDPATANAVVAFQKSRGLKADGVVGPDTWSALG 73

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRY-VLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
             + +                    G  Y + ++     L   ++G       V VG+  
Sbjct: 74  TDMAVSAA----------------PGQGYRIFIDTERFRLSLFKDGVHQAAWPVAVGKPS 117

Query: 226 RQTPILHSRINRIMFNP 242
             TPI    I   + NP
Sbjct: 118 TPTPIGDWVITEKIMNP 134



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 97  LPIRPLHLG-NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
              R L +G      + ++++RL   G       L   F     +AV  FQ   GL P G
Sbjct: 199 FTGRLLQIGIPPGSDIVQVQQRLQTLGYYKEE--LDGQFGPTTRNAVIAFQRVRGLVPDG 256

Query: 156 MVDSSTLEAM 165
           +V   T E +
Sbjct: 257 IVGPRTYEEL 266


>gi|157374221|ref|YP_001472821.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sediminis HAW-EB3]
 gi|157316595|gb|ABV35693.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sediminis HAW-EB3]
          Length = 333

 Score = 80.6 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 40/190 (21%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +  + +++N+P   L     NGK      V +GRV R+TP + ++I   + NP W
Sbjct: 84  MLLPDVPRKGIVINLPELRLYYFPTNGKEVHVFPVGIGRVGRETPEMVTKIKSRIPNPSW 143

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI         R+D  +L +           EV    V                G 
Sbjct: 144 TPPASI---------RRD--HLAERG---------EVLPRVV--------------PAGP 169

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    ++    + +Y +H T +   F   +R  +SGCVR+ N  D++    +     
Sbjct: 170 DNPLGKYAMQLSHGDGSYLIHGTNKD--FGVGMR-VSSGCVRL-NPDDIEWLFHQAKYGD 225

Query: 364 SRYHIEEVVK 373
           S   I E VK
Sbjct: 226 SVRVINETVK 235


>gi|170725525|ref|YP_001759551.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella woodyi ATCC 51908]
 gi|169810872|gb|ACA85456.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella woodyi ATCC 51908]
          Length = 301

 Score = 79.9 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 40/194 (20%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +    +++N+P   L    +NGK      V +GR+ R+TP + ++I   + NP W
Sbjct: 84  MLLPDVPRTGIVINLPELRLYYFPKNGKEVHVFPVGIGRIGRETPEMVTKIKSRIPNPSW 143

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI +KD          +L++           EV    V                G 
Sbjct: 144 TPPASI-RKD----------HLEERG---------EVLPRIV--------------PAGP 169

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    ++    + +Y +H T +   F   +R  +SGC+R+ N  D++    +     
Sbjct: 170 DNPLGKYAMQLSYGDGSYLIHGTNKD--FGIGMR-VSSGCIRL-NPDDIEWLFHQAKYGD 225

Query: 364 SRYHIEEVVKTRKT 377
           S   I + VKT   
Sbjct: 226 SVRIINQTVKTSSE 239


>gi|120554152|ref|YP_958503.1| hypothetical protein Maqu_1226 [Marinobacter aquaeolei VT8]
 gi|120324001|gb|ABM18316.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
          Length = 87

 Score = 79.1 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 78  TEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLD---------- 125
               +A Y+ +  +GGWP+LP R   L  G+    V  LR+RL+++G+L           
Sbjct: 1   MRAGLAQYRHLERQGGWPQLPNRQQSLRPGDVHEEVALLRKRLLVTGELAITHVDELAGQ 60

Query: 126 ---PSKGLSVAFDAYVESAVKLFQMR 148
               S   +  +D ++  AV+ FQ  
Sbjct: 61  SIVSSHPETYEYDEHLVDAVRRFQQH 86


>gi|159040579|ref|YP_001539832.1| cell wall hydrolase/autolysin [Salinispora arenicola CNS-205]
 gi|157919414|gb|ABW00842.1| cell wall hydrolase/autolysin [Salinispora arenicola CNS-205]
          Length = 387

 Score = 79.1 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 19/104 (18%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +RP+  G+   +V  +R  L     L PS   S  FDA+ E AV+ FQ   GL   G V 
Sbjct: 1   MRPIRPGDRGPAVTEIRRVLAGLDLLVPSAPDSDEFDAHTERAVRAFQQSRGLSVDGRVG 60

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           + T  A++               R +      +G R +  ++P 
Sbjct: 61  TETWRALD-------------AARWR------LGARTLYHSVPE 85



 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 45/131 (34%), Gaps = 23/131 (17%)

Query: 56  LARVDMGIDSDIPII--SKETIAQTEKAIAFYQD--------ILSRGGWPELPIRPLHLG 105
           + RV  G+D  +P    S E  A TE+A+  +Q          +    W  L      LG
Sbjct: 16  IRRVLAGLDLLVPSAPDSDEFDAHTERAVRAFQQSRGLSVDGRVGTETWRALDAARWRLG 75

Query: 106 NS-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                           ++ L+ERL+  G           +      A+  FQ   GL P 
Sbjct: 76  ARTLYHSVPEPLTGEDIRSLQERLLEMGY--DVGRADAIYGVRTARALAQFQREVGLIPD 133

Query: 155 GMVDSSTLEAM 165
           G     TL ++
Sbjct: 134 GTCGPHTLNSL 144


>gi|145597090|ref|YP_001161387.1| cell wall hydrolase/autolysin [Salinispora tropica CNB-440]
 gi|145306427|gb|ABP57009.1| cell wall hydrolase/autolysin [Salinispora tropica CNB-440]
          Length = 392

 Score = 78.3 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 19/104 (18%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +RP+  G+   +V  +R+ L     L P+   S  FDA+ E AV+ FQ   GL   G V 
Sbjct: 1   MRPIRPGDRGPAVTEIRKVLAGLDLLVPAAPDSDEFDAHTERAVRAFQQSRGLSVDGRVG 60

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           + T +A++               R +      +G R +  ++P 
Sbjct: 61  TETWQALD-------------AARWR------LGARTLYHSVPE 85



 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 45/131 (34%), Gaps = 23/131 (17%)

Query: 56  LARVDMGIDSDIPII--SKETIAQTEKAIAFYQD--------ILSRGGWPELPIRPLHLG 105
           + +V  G+D  +P    S E  A TE+A+  +Q          +    W  L      LG
Sbjct: 16  IRKVLAGLDLLVPAAPDSDEFDAHTERAVRAFQQSRGLSVDGRVGTETWQALDAARWRLG 75

Query: 106 NS-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                           ++ L+ERL+  G           +      A+  FQ   GL P 
Sbjct: 76  ARTLYHSVPEPLIGEDIRSLQERLLEMGY--DVGRADAIYGVRTARALAQFQREVGLAPD 133

Query: 155 GMVDSSTLEAM 165
           G     T+ ++
Sbjct: 134 GTCGPHTVNSL 144


>gi|218507870|ref|ZP_03505748.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli Brasil 5]
          Length = 103

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            S LD ++N       +D+FD   A R    + S+ PI+  +++A  ++AI  YQ I + 
Sbjct: 35  QSALDGLLNAPRRGNWDDQFDAKAASRTASAVVSNTPILGPQSVASAQQAIMQYQQIAAA 94

Query: 92  GGWPEL 97
           GGWPE+
Sbjct: 95  GGWPEV 100


>gi|329118082|ref|ZP_08246794.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465742|gb|EGF12015.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 349

 Score = 76.4 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 74/234 (31%), Gaps = 73/234 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            +V++NIP   L    +GK+     V VG+   QT I   +I    FNP W IP+SI QK
Sbjct: 57  THVVINIPQQRLFLYSDGKLSKIYPVAVGKAMTQTNIGSHKIGAKAFNPTWHIPKSI-QK 115

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           ++             N I  +                           PG  N +    +
Sbjct: 116 EL------------KNGITSV--------------------------PPGPKNPLGPVFV 137

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + V
Sbjct: 138 RLGDPKLGLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------QFAKTV 180

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGIIP 421
            T            P   +Y  A   +D      +  FR D Y   N+    + 
Sbjct: 181 STGS----------PADVIYQMAALNEDGAGNLWLAAFR-DPYNKKNLDTAALR 223


>gi|302531346|ref|ZP_07283688.1| N-acetylmuramoyl-L-alanine amidase [Streptomyces sp. AA4]
 gi|302440241|gb|EFL12057.1| N-acetylmuramoyl-L-alanine amidase [Streptomyces sp. AA4]
          Length = 382

 Score = 76.4 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGM 156
           +R L  G++   V  +R  L     L P  G      FD  VE AV+ FQ R GL   G+
Sbjct: 1   MRVLRRGDAGPDVAEIRSILAGMDLLPPVAGTERYNTFDVAVEQAVRAFQQRRGLITDGV 60

Query: 157 VDSSTLEAM 165
           V  +T +A+
Sbjct: 61  VGPATYQAL 69



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 8/96 (8%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSV----SVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           A YQ +  +G    L  RPL    SS      V  L+ERL   G    +      F    
Sbjct: 64  ATYQAL--KGASYHLGSRPLQYLLSSPVHGDDVFTLQERLTELGF--DAGRPDGYFGPQT 119

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           E A++ FQ    L   G+   +T+  ++     R R
Sbjct: 120 ERALRTFQRDMRLTSDGICGPATIRELHRLSSPRAR 155


>gi|163751582|ref|ZP_02158804.1| hypothetical protein KT99_01257 [Shewanella benthica KT99]
 gi|161328590|gb|EDP99743.1| hypothetical protein KT99_01257 [Shewanella benthica KT99]
          Length = 320

 Score = 76.0 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 41/190 (21%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +  + +++N+P   L    +NGK      V +GR+ R+TP + ++I   + NP W
Sbjct: 104 MLLPDVPRKGIVLNLPELRLYYFPKNGKQVHVFPVGIGRIGRETPEMVTKIKARIPNPSW 163

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI +K+ +                       EV    V                G 
Sbjct: 164 TPPASI-RKEHLER--------------------GEVLPAIV--------------PAGP 188

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N + +  ++    + +Y +H T +   F   +R  +SGCVR+ N  D++    +     
Sbjct: 189 DNPLGNYAMQLSYGDGSYLIHGTNKD--FGVGMR-VSSGCVRL-NPDDIEWLFNQTQYGD 244

Query: 364 SRYHIEEVVK 373
               I + VK
Sbjct: 245 PVRVINQTVK 254


>gi|331700382|ref|YP_004336621.1| cell wall hydrolase/autolysin [Pseudonocardia dioxanivorans CB1190]
 gi|326955071|gb|AEA28768.1| cell wall hydrolase/autolysin [Pseudonocardia dioxanivorans CB1190]
          Length = 388

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)

Query: 102 LHLGNSSVSVQRLRERLIISGD-----LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           L  G+S  +V  +R  L   G        P       FD +VE AV+ FQ R GL   G+
Sbjct: 4   LRRGDSGPAVAEIRGMLARYGLPAGQQAPPGGPAEQLFDEHVEQAVRAFQQRRGLITDGV 63

Query: 157 VDSSTLEAM 165
           V  +T  A+
Sbjct: 64  VGPATYRAL 72



 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 45/129 (34%), Gaps = 13/129 (10%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR 100
                      FD  + +          +I+   +       A Y+ +   G W +L  R
Sbjct: 30  QAPPGGPAEQLFDEHVEQAVRAFQQRRGLITDGVV-----GPATYRALREAG-W-KLGDR 82

Query: 101 PLHL----GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            L L      S   V  L+ERL+  G           FD   E  +K FQ  +GL P G+
Sbjct: 83  MLALLISAPMSGDDVVTLQERLLELGY--DVGRPGGVFDDQTERGLKGFQRDYGLVPDGV 140

Query: 157 VDSSTLEAM 165
               TL A+
Sbjct: 141 CGPQTLRAL 149


>gi|302870718|ref|YP_003839355.1| cell wall hydrolase/autolysin [Micromonospora aurantiaca ATCC
           27029]
 gi|302573577|gb|ADL49779.1| cell wall hydrolase/autolysin [Micromonospora aurantiaca ATCC
           27029]
          Length = 417

 Score = 75.3 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           + +RP+  G+   +V  +R  L     L    G    +DA  E AV+ FQ   GL   G 
Sbjct: 30  VVVRPIRPGDQGPAVAEIRTVLAGLELLPAEAGGDD-YDAQTERAVRAFQQSRGLSVDGR 88

Query: 157 VDSSTLEAM 165
           V + T  A+
Sbjct: 89  VGAETWRAL 97



 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 35/109 (32%), Gaps = 21/109 (19%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNS-----------SVSVQRLRE 116
           AQTE+A+  +Q          +    W  L       G                V+ L+E
Sbjct: 68  AQTERAVRAFQQSRGLSVDGRVGAETWRALDAARWRFGARALYHAVPEPLTGEDVRSLQE 127

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL+  G           +      AV  FQ   GL P G     T+ A+
Sbjct: 128 RLLEMGY--DVGRADAIYGIRTSRAVAQFQREMGLKPDGSCGPHTVNAL 174


>gi|119512142|ref|ZP_01631234.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
 gi|119463232|gb|EAW44177.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
          Length = 407

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   SV+ L+E+L  +G       ++  +D   E AV+ FQ  HGL   G+V  ST
Sbjct: 66  LERGDQGPSVKNLQEQLQQAGFY--QAPITEVYDFSTEDAVRRFQQAHGLAVDGIVGVST 123

Query: 162 LEAMNVPVDLRIRQ 175
            + +      +I+Q
Sbjct: 124 RQKLETSPTPQIKQ 137



 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+ S +V+ L+ERL ++G        +  F    E A+K FQ  + LD  G+   +T
Sbjct: 202 LQKGDESEAVRILQERLRVAGFFSGQA--TGVFGPVTEDALKAFQQAYELDVDGIAGPAT 259

Query: 162 LEAM 165
           L  +
Sbjct: 260 LRKL 263



 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             +    L  G+   +V+ L++ LI +G    +   S  FD+   +AV  FQ  + L  S
Sbjct: 277 QAVSTDNLTRGHQGEAVKLLQQHLIQAGYFKGTP--SGYFDSSTAAAVSQFQAANYLAVS 334

Query: 155 GMVDSSTLEAM 165
           G+   +T   +
Sbjct: 335 GIAGPTTRAKL 345


>gi|317126727|ref|YP_004100839.1| cell wall hydrolase/autolysin [Intrasporangium calvum DSM 43043]
 gi|315590815|gb|ADU50112.1| cell wall hydrolase/autolysin [Intrasporangium calvum DSM 43043]
          Length = 418

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSG 155
           L  G+S  +V  +  RL+++GDL  S         +  FD  VE AVK FQ R GL   G
Sbjct: 9   LRRGDSGPAVADVCARLLLTGDLPASWAERGVPRGTAVFDETVEEAVKSFQQRRGLLVDG 68

Query: 156 MVDSSTLEAMNV 167
           +V  ST   ++ 
Sbjct: 69  VVGRSTYSVLDG 80



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
              V RL+ RL+  G       +        ++A++ FQ   GL P G +   TL A
Sbjct: 100 GDDVVRLQARLLELGFTPG--KVDGIHGPATDAALRSFQAAVGLTPDGTLGPETLRA 154


>gi|257057905|ref|YP_003135737.1| N-acetylmuramoyl-L-alanine amidase [Saccharomonospora viridis DSM
           43017]
 gi|256587777|gb|ACU98910.1| N-acetylmuramoyl-L-alanine amidase [Saccharomonospora viridis DSM
           43017]
          Length = 382

 Score = 74.9 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +R L  G++   V  +R  L     L PS+   G +  FD  VE AV+ FQ + GL   G
Sbjct: 1   MRVLRRGDTGPEVAEIRSMLSALDLLPPSEEANGHAAFFDQQVEHAVRAFQQQRGLITDG 60

Query: 156 MVDSSTLEAMNVP 168
           +V  +T  A+   
Sbjct: 61  VVGPATYRALRGS 73



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 9/95 (9%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSV----SVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           A Y+ +  RG    L  RPL    SS      V  L+ERL   G    +      F    
Sbjct: 65  ATYRAL--RGSTYHLGSRPLAYSVSSPVHGDDVFALQERLTELGY--DAGRPDGGFGPQT 120

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLR 172
           E A+K FQ  +GL   G+   +T+ A+  +    R
Sbjct: 121 ERALKNFQRDYGLVVDGICGPATVRALRQLSPRAR 155


>gi|119486095|ref|ZP_01620157.1| Peptidoglycan-binding domain 1 protein [Lyngbya sp. PCC 8106]
 gi|119456870|gb|EAW37998.1| Peptidoglycan-binding domain 1 protein [Lyngbya sp. PCC 8106]
          Length = 225

 Score = 74.9 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 67/176 (38%), Gaps = 12/176 (6%)

Query: 4   YLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGI 63
           Y KI K    FF+   + +G++        +   +++           FD  +      +
Sbjct: 34  YRKIYKFFSMFFLITAILLGVNAAFALQQGNRGIKVVELQKKLHKIGYFDGQITGYYGTL 93

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP------LHLGNSSVSVQRLRER 117
             +     + T   T   IA Y+ + + G    +  +       L LG+S   V  L++ 
Sbjct: 94  TQNAVSQFQATNGLTVDGIAGYKTLAALGLSEAITTQTSQHTSLLKLGSSGSLVIELQQH 153

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM----NVPV 169
           L + G  D    ++  +D   + AV LFQM  GL   G+V   T  A+    N P 
Sbjct: 154 LQVLGYYDG--LMTGYYDLSTQQAVILFQMDVGLKSDGIVGPLTQAAIESQFNSPP 207


>gi|300791154|ref|YP_003771445.1| N-acetylmuramoyl-L-alanine amidase [Amycolatopsis mediterranei U32]
 gi|299800668|gb|ADJ51043.1| N-acetylmuramoyl-L-alanine amidase [Amycolatopsis mediterranei U32]
          Length = 382

 Score = 74.5 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPSGM 156
           +R L  G++   V  +R  L     L P  G      FD  VE AV+ FQ R GL   G+
Sbjct: 1   MRVLRRGDAGPDVAEIRSILAGMDLLPPVTGTDDYDTFDVAVEHAVRAFQQRRGLMTDGI 60

Query: 157 VDSSTLEAM 165
           V  +T +A+
Sbjct: 61  VGPATFQAL 69



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 14/109 (12%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLD 125
           Q  + +     I+    +  L     HLG+               V  L+ERL   G   
Sbjct: 50  QQRRGLMT-DGIVGPATFQALKGASYHLGSRPLSYMIASPVHGDDVFTLQERLTELGF-- 106

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
            +      F    E A+K FQ    L P GM   +T+  ++     R R
Sbjct: 107 DAGRPDGYFGPQTERALKTFQRDMRLTPDGMCGPATIRELHRLSSPRAR 155


>gi|315506955|ref|YP_004085842.1| cell wall hydrolase/autolysin [Micromonospora sp. L5]
 gi|315413574|gb|ADU11691.1| cell wall hydrolase/autolysin [Micromonospora sp. L5]
          Length = 386

 Score = 74.5 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +RP+  G+   +V  +R  L     L    G    +DA  E AV+ FQ   GL   G V 
Sbjct: 1   MRPIRPGDQGPAVAEIRTVLAGLELLPAEAGGDD-YDAQTERAVRAFQQSRGLSVDGRVG 59

Query: 159 SSTLEAM 165
           + T  A+
Sbjct: 60  AETWRAL 66



 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 35/109 (32%), Gaps = 21/109 (19%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNS-----------SVSVQRLRE 116
           AQTE+A+  +Q          +    W  L       G                V+ L+E
Sbjct: 37  AQTERAVRAFQQSRGLSVDGRVGAETWRALDAARWRFGARALYHAVPEPLTGEDVRSLQE 96

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL+  G           +      AV  FQ   GL P G     T+ A+
Sbjct: 97  RLLEMGY--DVGRADAIYGIRTSRAVAQFQREMGLKPDGSCGPHTVNAL 143


>gi|134103806|ref|YP_001109467.1| N-acetylmuramoyl-L-alanine amidase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291005736|ref|ZP_06563709.1| N-acetylmuramoyl-L-alanine amidase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133916429|emb|CAM06542.1| N-acetylmuramoyl-L-alanine amidase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 383

 Score = 74.5 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG--LSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           LH G+   +V  +R  L   G L    G      +DA VE AV++FQ + GL   G+V  
Sbjct: 4   LHRGDVGPAVAEIRNTLAALGLLPAPNGRPDPATYDAAVEHAVRVFQQQRGLITDGVVGP 63

Query: 160 STLEAM 165
           +T  A+
Sbjct: 64  ATYRAL 69



 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S   V  L+ERL+  G    +      F    E A++ FQ  +GL+P G+    TL A+
Sbjct: 90  SGDDVFALQERLLELGY--DAGRPDGIFGHETEQALRSFQRDYGLNPDGICGPGTLRAL 146


>gi|184201995|ref|YP_001856202.1| putative N-acetylmuramoyl-L-alanine amidase [Kocuria rhizophila
           DC2201]
 gi|183582225|dbj|BAG30696.1| putative N-acetylmuramoyl-L-alanine amidase [Kocuria rhizophila
           DC2201]
          Length = 411

 Score = 74.5 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 5/74 (6%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPS-----KGLSVAFDAYVESAVKLFQMRHGLD 152
           P   L  G +   V  LRERL+ +G  D +           FD  V+ AV+ FQ R GL 
Sbjct: 6   PGAALRHGMTDRRVAGLRERLVRAGADDAALSPDAATDPTVFDQRVDGAVRGFQQRKGLI 65

Query: 153 PSGMVDSSTLEAMN 166
             G+V   T  A+N
Sbjct: 66  VDGVVGPDTESALN 79



 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V+ L+  L + G       L   F    E AVK  Q   G+   G+V   TL  +
Sbjct: 98  MHGDDVEELQNNLSLLGFY--YGHLDGTFARQTEYAVKELQSSLGVPEDGVVGLDTLTGL 155


>gi|294139659|ref|YP_003555637.1| LysM domain-containing protein [Shewanella violacea DSS12]
 gi|293326128|dbj|BAJ00859.1| LysM domain protein [Shewanella violacea DSS12]
          Length = 307

 Score = 74.1 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 41/190 (21%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +  + +++N+P   L    +NGK      V +GRV R+TP + ++I   + NP W
Sbjct: 84  MLLPDVPRKGIVLNLPELRLYYFSKNGKQVHVFPVGIGRVGRETPEMVTKIKARIPNPSW 143

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI +K+ +                       E+    V                G 
Sbjct: 144 TPPASI-RKEHLER--------------------GEILPPVV--------------AAGP 168

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N + +  ++    + +Y +H T +   F   +R  +SGCVR+ N  D++    +     
Sbjct: 169 DNPLGNYAMQLSYGDGSYLIHGTNKD--FGIGMR-VSSGCVRL-NPDDIEWLFNQTKYGD 224

Query: 364 SRYHIEEVVK 373
               I + VK
Sbjct: 225 PVRVINQTVK 234


>gi|238061899|ref|ZP_04606608.1| cell wall hydrolase/autolysin [Micromonospora sp. ATCC 39149]
 gi|237883710|gb|EEP72538.1| cell wall hydrolase/autolysin [Micromonospora sp. ATCC 39149]
          Length = 388

 Score = 74.1 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 30/67 (44%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +RP+  G+   +V  +R  L     L P    +  FD   E AV+ FQ   GL   G V 
Sbjct: 1   MRPIRTGDRGPAVSEIRAVLTGLDLLTPGSSAADEFDTETERAVRAFQQSRGLSVDGRVG 60

Query: 159 SSTLEAM 165
           + T  A+
Sbjct: 61  AETWRAL 67



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 25/83 (30%), Gaps = 13/83 (15%)

Query: 94  WPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           W  L      LG                V+ L+ERL+  G           +      AV
Sbjct: 64  WRALDAARWRLGARTLYHAVPEPLTGEDVRSLQERLLEMGY--DVGRADAVYGVRTSRAV 121

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
             FQ   GL P G     T+  +
Sbjct: 122 AQFQREMGLKPDGSCGPHTMRVL 144


>gi|333008911|gb|EGK28371.1| peptidoglycan-binding domain 1 domain protein [Shigella flexneri
           K-272]
 gi|333020221|gb|EGK39491.1| peptidoglycan-binding domain 1 domain protein [Shigella flexneri
           K-227]
          Length = 74

 Score = 73.7 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 3   DAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 56


>gi|284043195|ref|YP_003393535.1| glycoside hydrolase family 24 [Conexibacter woesei DSM 14684]
 gi|283947416|gb|ADB50160.1| glycoside hydrolase family 24 [Conexibacter woesei DSM 14684]
          Length = 391

 Score = 73.3 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 5/95 (5%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           S   + +  + +A  + +L R     L  RPL  G  +  V+ +R  L ++G +D  +  
Sbjct: 112 SATALQRVARRLARPRTVLER-----LRARPLRRGAKTPDVKTVRTYLELAGLVDRDRTR 166

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              +   +  AV+ FQ R GL   G+V   T  A+
Sbjct: 167 RDEYGEPLALAVRAFQRRVGLTEDGLVGPKTFAAL 201


>gi|332968887|gb|EGK07934.1| ErfK/YbiS/YcfS/YnhG family protein [Kingella kingae ATCC 23330]
          Length = 305

 Score = 72.9 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 70/238 (29%), Gaps = 71/238 (29%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                 +YV++N+P   L    NG++     V VG+   QT +   RI    FNP W IP
Sbjct: 30  APDAEGQYVVINVPQQRLFLYNNGRLQKVYPVAVGKAMTQTNLGEHRIGAKAFNPTWHIP 89

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI ++                        G +                     PG  N 
Sbjct: 90  LSIQRE---------------------RGDGVKTVP------------------PGPSNP 110

Query: 308 MASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           +    +          +H T  P    +V    + GCVR+++   L              
Sbjct: 111 LGPVFVRMGDPKLGLGIHGTSNPG---SVPGVASHGCVRMKSPDAL-------------- 153

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF----RDDIYGLDNVHVGII 420
                ++T  T  V           Y  A   +D           D Y  +N+ V  +
Sbjct: 154 EFARTIRTGSTALVS----------YEMAALNQDGAGNLWLAAFKDPYRKNNLRVNAL 201


>gi|75907183|ref|YP_321479.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75700908|gb|ABA20584.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 575

 Score = 72.9 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L  G+ +  V  L+++L  SG    +   +  F +  E+AVK FQ  +GL  
Sbjct: 48  WCLPAAAALKKGHRNPQVASLQQKLRASGYFSQAA--TGYFGSVTEAAVKRFQEANGLKA 105

Query: 154 SGMVDSSTLEAM 165
            G+V ++TL A+
Sbjct: 106 DGIVGAATLAAL 117



 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 76/228 (33%), Gaps = 60/228 (26%)

Query: 95  PELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P +      L  G+ S  V  L+E+L   G    +  ++  FD   ++AV  FQ  + L 
Sbjct: 131 PPIAASKSSLKRGDISDRVMSLQEKLQADGYYQGA--ITGNFDTATQAAVIQFQQANRLV 188

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMR---IKKLLEQKMGLRYVLVNI--------- 200
             G+V   T   +        R+L  +L +   ++  L ++       V I         
Sbjct: 189 ADGIVGPKTSSVLASST----RKLAASLPQKTTLEPFLTEQPQKPQNQVKIAPQSAAPPS 244

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR----INRIMFNPYWVIPRSIIQKDMM 256
           P+  +  +           I G++  ++ +           +M+N       +I   D  
Sbjct: 245 PSQKMRLI---------KTISGKISPKSVVYSGNGLFFAQNMMYN------HTITVYD-- 287

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF--IFRQDP 302
                        N  ++     +V  +EVD +      F   +R  P
Sbjct: 288 ------------RNYELV-----KVIPDEVDLSKYGHSRFKGKYRGAP 318


>gi|17230433|ref|NP_486981.1| hypothetical protein all2941 [Nostoc sp. PCC 7120]
 gi|17132035|dbj|BAB74640.1| all2941 [Nostoc sp. PCC 7120]
          Length = 572

 Score = 72.9 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L  G+ +  V  L+++L  SG        +  F +  E+AVK FQ  +GL   
Sbjct: 51  PTVAA--LKKGHRNPQVASLQQKLRASGYFPQVA--TGYFGSVTEAAVKRFQQANGLKAD 106

Query: 155 GMVDSSTLEAM 165
           G+V ++TL A+
Sbjct: 107 GIVGAATLAAL 117



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 74/225 (32%), Gaps = 57/225 (25%)

Query: 95  PELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P++      L  G+ S  V  L+E+L   G    +  ++  FDA  ++AV  FQ  + L 
Sbjct: 131 PQIATSKSSLKQGDISDRVMSLQEKLQADGYYQGA--ITGNFDAATQAAVIQFQQANRLV 188

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI---------PAA 203
             G+V   T   +        R+L  +L +   L           V I         P+ 
Sbjct: 189 VDGIVGPQTSSVLASST----RKLAASLPQKTTLEPFLTQQPQNQVKISPQSAAPPSPSQ 244

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSR----INRIMFNPYWVIPRSIIQKDMMALL 259
            +  +           I G++  ++ +           +M+N       +I   D     
Sbjct: 245 KMRLI---------KTISGKISPKSVVYSGNGLFFAQNMMYN------HTITVYD----- 284

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF--IFRQDP 302
                     N  ++     +V  +EVD +      F   +R  P
Sbjct: 285 ---------RNYELV-----KVIPDEVDLSKYGHSRFKGKYRGAP 315


>gi|295703171|ref|YP_003596246.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
 gi|294800830|gb|ADF37896.1| N-acetylmuramoyl-L-alanine amidase cwlL (Cell wall hydrolase)
           (Autolysin) [Bacillus megaterium DSM 319]
          Length = 281

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 13/166 (7%)

Query: 7   INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSD 66
            N+ L       +   G       IH +     I +   S     +D  +  +   +   
Sbjct: 25  GNRWL------GLNARGTYGTTYAIHGNNNPASIGKYVSSGCVRMYDEEVEWLFSKVTVG 78

Query: 67  IPII---SKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISG 122
            P++   S ++      A   Y    + G  P       L  G+   +V+ L+++L   G
Sbjct: 79  TPVVITTSSKSFNDI-AAANGYNVSGNSGSAPAPSTGTVLKKGSKGNAVKELQQKLTSLG 137

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
               +KG    F A  +SAV+ FQ  HGL   G+V  ST +A+   
Sbjct: 138 Y--NTKGTDGVFGANTDSAVRKFQKDHGLTADGIVGPSTYKALGSS 181



 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+   +VQ L+++L   G    +KG    F A  ESAV+ FQ  + L   G+   
Sbjct: 215 QTLKKGSKGSNVQALQKKLTALGY--DTKGTDGIFGANTESAVRNFQKDNKLAADGIAGP 272

Query: 160 STLEAM 165
           +TL A+
Sbjct: 273 NTLAAI 278


>gi|118620070|ref|YP_908402.1| hydrolase [Mycobacterium ulcerans Agy99]
 gi|118572180|gb|ABL06931.1| hydrolase [Mycobacterium ulcerans Agy99]
          Length = 406

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 8/73 (10%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLD-PSKGLSV-------AFDAYVESAVKLFQMRHGLD 152
            L  G+ S +V  +R  L   G LD P + LS         FD  ++ AV+ FQ   GL 
Sbjct: 11  TLRCGDRSAAVAEIRAALAALGMLDNPDEDLSTGRHIALELFDPELDHAVRAFQQHRGLL 70

Query: 153 PSGMVDSSTLEAM 165
             G+V  +T  A+
Sbjct: 71  VDGIVGEATYRAL 83



 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 14/148 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
                L +++ P         I  E +   ++     F     + +D    I+ + T   
Sbjct: 26  AALAALGMLDNPDEDLSTGRHIALELFDPELDHAVRAFQQHRGLLVDG---IVGEATYRA 82

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
             +A   Y+ + +R  + +    PL  G+    V  L+ RL   G       +   F   
Sbjct: 83  LREA--SYR-LGARTLYHQFGA-PL-YGD---DVATLQARLQDLGFYTG--LVDGYFGLQ 132

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +A+  +Q  +G+   G+    TL ++
Sbjct: 133 THNALMSYQREYGMSADGICGPETLRSL 160


>gi|183985449|ref|YP_001853740.1| hydrolase [Mycobacterium marinum M]
 gi|183178775|gb|ACC43885.1| hydrolase [Mycobacterium marinum M]
          Length = 406

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 8/73 (10%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLD-PSKGLSV-------AFDAYVESAVKLFQMRHGLD 152
            L  G+ S +V  +R  L   G LD P + LS         FD  ++ AV+ FQ   GL 
Sbjct: 11  TLRCGDRSAAVAEIRAALAALGMLDNPDEDLSTGRHIALELFDPELDHAVRAFQQHRGLL 70

Query: 153 PSGMVDSSTLEAM 165
             G+V  +T  A+
Sbjct: 71  VDGIVGEATYRAL 83



 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 14/148 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
                L +++ P         I  E +   ++     F     + +D    I+ + T   
Sbjct: 26  AALAALGMLDNPDEDLSTGRHIALELFDPELDHAVRAFQQHRGLLVDG---IVGEATYRA 82

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
             +A   Y+ + +R  + +    PL  G+    V  L+ RL   G       +   F   
Sbjct: 83  LREA--SYR-LGARTLYHQFGA-PL-YGD---DVATLQARLQDLGFYTG--LVDGYFGLQ 132

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +A+  +Q  +G+   G+    TL ++
Sbjct: 133 THNALMSYQREYGMSADGICGPETLRSL 160


>gi|78223666|ref|YP_385413.1| peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Geobacter
           metallireducens GS-15]
 gi|78194921|gb|ABB32688.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Geobacter
           metallireducens GS-15]
          Length = 293

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 94/268 (35%), Gaps = 85/268 (31%)

Query: 162 LEAMN-VPVDL--RIRQ-LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           L  +N +      R  Q L+V+    ++++ +++    +++NIP  +L    NG+V    
Sbjct: 52  LAQLNRIDPQKPLRAGQVLRVDT---RRIVPRQIDDG-IVINIPDRTLYYFRNGEVDRVL 107

Query: 218 TVIVGRV---------DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           +V VG+          D  TP  + RI   + +P W +P SI +K+M             
Sbjct: 108 SVAVGKPKPVNDPEKRDWHTPTGNFRIIGKVKDPTWRVPPSI-RKEM------------- 153

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST--KIEFYSRNNTYMHDT 326
                  E+GKEV                    PGK N +     K          +H T
Sbjct: 154 ------KERGKEVKTIV---------------PPGKKNPLGKYALKTSIP---GILIHST 189

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
             P    +V  F + GC+RV              P +       V  T +TT   +   V
Sbjct: 190 NAP---ESVYSFSSHGCIRV-------------FPEFMEDFFNSV--TEETTGEIIYEPV 231

Query: 387 PVHFVYISAWSPKDSII--QFRDDIYGL 412
                 ++     +  +  +   DIY  
Sbjct: 232 K-----MTV---AEGQVFLEVHRDIYNR 251


>gi|294497796|ref|YP_003561496.1| putative peptidoglycan binding domain-containing protein [Bacillus
           megaterium QM B1551]
 gi|294347733|gb|ADE68062.1| Putative peptidoglycan binding domain protein [Bacillus megaterium
           QM B1551]
          Length = 354

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 13/166 (7%)

Query: 7   INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSD 66
            N+ L       +   G       IH +     I +   S     +D  +  +   +   
Sbjct: 102 GNRWL------GLNARGTYGTTYAIHGNNNPASIGKYVSSGCVRMYDEEVEWLFSKVTVG 155

Query: 67  IPII---SKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISG 122
            P++   S ++      A   Y    + G  P       L  G+   +V+ L+++L   G
Sbjct: 156 TPVVITTSSKSFNDI-AAANGYNVSGNSGSTPAPSTGTVLKKGSKGNAVKELQQKLTSLG 214

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
               ++G    F A  +SAV+ FQ  HGL   G+V  ST +A+   
Sbjct: 215 Y--NTQGTDGVFGANTDSAVRKFQKDHGLTADGIVGPSTYKALGSS 258



 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+   +VQ L+++L   G    +KG    F A  E+AV+ FQ  + L   G+   
Sbjct: 288 QTLKKGSKGSNVQALQKKLTAIGY--NTKGTDGIFGANTEAAVRNFQKDNKLAADGIAGP 345

Query: 160 STLEAM 165
           +TL A+
Sbjct: 346 NTLTAI 351


>gi|254818669|ref|ZP_05223670.1| putative N-acetylmuramoyl-L-alanine amidase [Mycobacterium
           intracellulare ATCC 13950]
          Length = 407

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 9/73 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA---------FDAYVESAVKLFQMRHGLD 152
           L  G+ S +V  +R  L   G LD S    +          FDA ++ AV+ FQ   GL 
Sbjct: 12  LRCGDRSAAVTEIRATLASLGMLDGSDDEDLTTGRHVALELFDAELDQAVRAFQQHRGLL 71

Query: 153 PSGMVDSSTLEAM 165
             G+V  +T  A+
Sbjct: 72  VDGIVGEATYRAL 84



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 22/94 (23%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLS 131
           A Y+ +               LG                V  L+ RL   G       + 
Sbjct: 79  ATYRALKEA---------SYRLGARTLYHQFGAPLFGDDVATLQARLQDLGFYTG--LVD 127

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             F     +A+  +Q  +GL   G+    TL ++
Sbjct: 128 GYFGLQTHNALMSYQREYGLSADGICGPETLRSL 161


>gi|254507501|ref|ZP_05119635.1| general secretion pathway protein A [Vibrio parahaemolyticus 16]
 gi|219549571|gb|EED26562.1| general secretion pathway protein A [Vibrio parahaemolyticus 16]
          Length = 490

 Score = 72.2 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Y+ I     W +     L  G     V  L   L +   L   +  S  +D+ ++  VKL
Sbjct: 399 YRQI-----WRKYWGGSLKPGMQGEPVALLDRHLSML--LGKPRTGSDRYDSALQEKVKL 451

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           FQ   GL   G+   +TL+ +
Sbjct: 452 FQRWQGLSVDGIAGKNTLQRL 472


>gi|157960797|ref|YP_001500831.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella pealeana ATCC
           700345]
 gi|157845797|gb|ABV86296.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella pealeana ATCC
           700345]
          Length = 303

 Score = 72.2 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 41/173 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +  + V++N+    L    + GK      V +GRV R+TP + +RI   + NP W
Sbjct: 84  MLLPDVPHKGVVINLAELRLYYFPKGGKEVHVFPVGIGRVGRETPEMVTRIKSRIPNPSW 143

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI +K+          +L++           EV    V                G 
Sbjct: 144 TPPASI-RKE----------HLEERG---------EVLPRVV--------------PAGP 169

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
            N +    I+    + +Y +H T +   F   +R  ++GC+R+ N  D+  WL
Sbjct: 170 ENPLGKFAIQLSYGDGSYLIHGTNKD--FGIGMR-VSAGCIRL-NPDDI-EWL 217


>gi|332970134|gb|EGK09128.1| zinc D-Ala-D-Ala carboxypeptidase [Desmospora sp. 8437]
          Length = 243

 Score = 71.8 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLF 145
           +   GW     R L  G+S   V+ L+ R+       PS+    +   F    E+AVK F
Sbjct: 30  VDAYGW----SRTLKQGDSGADVRELQIRVAGWAADSPSRTYVAVDGVFGPGTEAAVKRF 85

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q  +GL P G+V  +T  A+N
Sbjct: 86  QRAYGLSPDGVVGPATQSALN 106


>gi|127511939|ref|YP_001093136.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella loihica PV-4]
 gi|126637234|gb|ABO22877.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella loihica PV-4]
          Length = 313

 Score = 71.8 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 75/190 (39%), Gaps = 40/190 (21%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +  + +++N+P   L    +NG+      V +GR+ R+TP + ++I   + NP W
Sbjct: 84  MLLPDVPRKGIVINLPELRLYYFPKNGREVHVFPVGIGRIGRETPEMTTKIKARIPNPSW 143

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P S+  +           +L++           EV    V                G 
Sbjct: 144 TPPASLRAE-----------HLRERG---------EVLPPVV--------------PAGP 169

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    ++    + +Y +H T +   F   +R  ++GC+R+ N  D++    +     
Sbjct: 170 DNPLGKYAMQLSYGDGSYLIHGTNKD--FGIGMR-VSAGCIRL-NPDDIEWLFHQAKYGD 225

Query: 364 SRYHIEEVVK 373
           S   I + VK
Sbjct: 226 SVRVINQTVK 235


>gi|167622954|ref|YP_001673248.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167352976|gb|ABZ75589.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 299

 Score = 71.8 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 41/185 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +  + +++N+    L    + GK      V +GRV R+TP + ++I   + NP W
Sbjct: 84  MLLPDVPHKGIVINLAELRLYYFPKGGKEVHVFPVGIGRVGRETPEMVTKIKSRIPNPSW 143

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI +KD          +L++                                  G 
Sbjct: 144 TPPASI-RKD----------HLEERG-----------------------EELPRVVPAGP 169

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    I+    + +Y +H T +   F   +R  ++GC+R+ N  D+  WL       
Sbjct: 170 DNPLGKFAIQLSYGDGSYLIHGTNKD--FGIGMR-VSAGCIRL-NPDDI-EWLFDKVKYG 224

Query: 364 SRYHI 368
            R  I
Sbjct: 225 ERVTI 229


>gi|295694715|ref|YP_003587953.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
 gi|295410317|gb|ADG04809.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
          Length = 276

 Score = 71.4 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 20/140 (14%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                   V  ++ RL + G L    G    +      AV  FQ   GL   G+V  +T 
Sbjct: 12  TPYMRGPDVIAVQRRLTVFGRLSSWDG---IYGPVTARAVAEFQRASGLLSDGIVGPATW 68

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            A+ +              +++       G  ++ ++     L   +  ++     V VG
Sbjct: 69  VALGI-------------EQVEW----GGGQFHIAIDTERRVLSLFQRDRLIRSFPVAVG 111

Query: 223 RVDRQTPILHSRINRIMFNP 242
           +    TP+    I   + NP
Sbjct: 112 KPTTPTPVGDWVIVEKIANP 131



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 97  LPIRPLHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           L  R LH+G +    + +++  L + G           F    ++AV+ FQ    L   G
Sbjct: 196 LTTRLLHMGVTPGDDIAQVQRMLQVLGFYRG--DTDGIFGRITDTAVRAFQQSAQLTVDG 253

Query: 156 MVDSST 161
           +V   T
Sbjct: 254 IVGPRT 259


>gi|150389053|ref|YP_001319102.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149948915|gb|ABR47443.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 280

 Score = 71.4 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 16/144 (11%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R +        V  ++ERL+  G  D    +   +D  +  AV+ +Q  +G+ P G+V 
Sbjct: 8   LRLVEPYMEGPDVMHIQERLVEIGFYDGE--IDGIYDEGLFEAVRTYQTEYGITPDGIVG 65

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
             T  ++ +  D+              +++       + +++    L   +  ++     
Sbjct: 66  PDTWNSIGLSPDV--------------MVDLPTEGYAIDIDLEQRILTLKQYTEILQSYP 111

Query: 219 VIVGRVDRQTPILHSRINRIMFNP 242
           V VG+    TP    RI +   NP
Sbjct: 112 VAVGKPQTPTPPGDWRIIQKTLNP 135



 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +  ++  L   G  +    + + +D     AV+ FQ    +   G+V   T   + + 
Sbjct: 213 ADILDVKNILATLGYYEGE--IDMIYDEETMEAVRNFQRDFNIIADGVVGVDTYNKLQLA 270

Query: 169 VDL 171
           ++ 
Sbjct: 271 IEQ 273


>gi|212633981|ref|YP_002310506.1| LysM domain-containing protein [Shewanella piezotolerans WP3]
 gi|212555465|gb|ACJ27919.1| LysM domain protein [Shewanella piezotolerans WP3]
          Length = 260

 Score = 71.4 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 72/190 (37%), Gaps = 40/190 (21%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +  + V++N+    L    + G+      V +GR+ R+TP + +RI   + NP W
Sbjct: 45  MLLPDVPHKGVVINLAELRLYYFPKGGQEVHVFPVGIGRIGRETPEMVTRIKSRIPNPSW 104

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI +K+          +L++                                  G 
Sbjct: 105 TPPASI-RKE----------HLEERG-----------------------EELPRVVLAGP 130

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    I+    + +Y +H T +   F   +R  ++GC+R+ N  D++    +     
Sbjct: 131 DNPLGKYAIQLSYGDGSYLIHGTNKD--FGIGMR-VSAGCIRL-NPDDIEWLFNEVKYGD 186

Query: 364 SRYHIEEVVK 373
           S   I + VK
Sbjct: 187 SVTVINQTVK 196


>gi|108802363|ref|YP_642560.1| peptidoglycan binding domain-containing protein [Mycobacterium sp.
           MCS]
 gi|119871516|ref|YP_941468.1| peptidoglycan binding domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126438343|ref|YP_001074034.1| peptidoglycan binding domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108772782|gb|ABG11504.1| Peptidoglycan-binding domain 1 [Mycobacterium sp. MCS]
 gi|119697605|gb|ABL94678.1| Peptidoglycan-binding domain 1 protein [Mycobacterium sp. KMS]
 gi|126238143|gb|ABO01544.1| Peptidoglycan-binding domain 1 protein [Mycobacterium sp. JLS]
          Length = 398

 Score = 71.4 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL--------SVAFDAYVESAVKLFQMRHG 150
           +  L  G+   +V  +R  L   G LD             +  FD +++ AV+ FQ   G
Sbjct: 1   MSSLRHGDRGAAVTEIRAALSALGLLDSPDDDLTTGRHVVADLFDDHLDQAVRAFQQHRG 60

Query: 151 LDPSGMVDSSTLEAM 165
           L   G+V  +T  A+
Sbjct: 61  LLVDGIVGEATYRAL 75



 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 18/150 (12%)

Query: 19  ILPMGLSLVEKPIHASVLDE-IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
                L L++ P         ++ + +   ++     F     + +D    I+ + T   
Sbjct: 18  AALSALGLLDSPDDDLTTGRHVVADLFDDHLDQAVRAFQQHRGLLVDG---IVGEATYRA 74

Query: 78  TEKAIAFY--QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
            ++A      + ++ + G P               V  L+ RL   G       +   F 
Sbjct: 75  LKEASYRLGARTLMHQFGAP----------MYGDDVATLQARLQDLGFYTG--LVDGHFG 122

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                 +  +Q  +GL P G+    TL ++
Sbjct: 123 LQTHHGLTSYQREYGLYPDGICGPETLRSL 152


>gi|146282381|ref|YP_001172534.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas stutzeri A1501]
 gi|145570586|gb|ABP79692.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas stutzeri A1501]
          Length = 451

 Score = 71.0 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 45/182 (24%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++NI    +     GK V     + +GR    +P+  +RI  +  NP
Sbjct: 219 RFILPPGPREG-IVINIAEYRMYYYPEGKNVVHTFPLGIGREGWGSPVGTARITAMTSNP 277

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P+SI +++                                  ++ +         P
Sbjct: 278 AWYPPKSI-REE----------------------------------HAADGDPLPTVVPP 302

Query: 303 GKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKD 359
           G  N +   K+           H + +   F   +R  + GC R+   N+++L   +   
Sbjct: 303 GPDNPLGPYKMSLSLPGYLI--HGSNKK--FGIGMR-VSHGCFRMLNHNVLELAKMVKVG 357

Query: 360 TP 361
           TP
Sbjct: 358 TP 359


>gi|120406998|ref|YP_956827.1| peptidoglycan binding domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119959816|gb|ABM16821.1| Peptidoglycan-binding domain 1 protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 395

 Score = 71.0 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 9/89 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL--------SVAFDAYVESAVKLFQMRHG 150
           +  L  G+   +V  +R  L   G +D             +  FD  ++ AV+ FQ   G
Sbjct: 1   MSSLRRGDRGGAVAEIRAALSALGMIDSPDEDLTTGKHVAADMFDDDLDHAVRAFQQHRG 60

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           L   G+V  +T  A+      R+    +N
Sbjct: 61  LLVDGIVGEATYRAL-KEASYRLGARTLN 88



 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 20/151 (13%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
                L +++ P      DE +    H +  D FD+ L            ++    + + 
Sbjct: 18  AALSALGMIDSP------DEDLTTGKH-VAADMFDDDLDHAVRAFQQHRGLLVDGIVGE- 69

Query: 79  EKAIAFYQDILSRGGWPELPIRPL--HLG--NSSVSVQRLRERLIISGDLDPSKGLSVAF 134
               A Y+ +        L  R L    G       V  L+ RL   G       +   F
Sbjct: 70  ----ATYRALKEAS--YRLGARTLNHQFGAPMYGDDVATLQSRLQDLGFYTG--LVDGHF 121

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                +A+  +Q  +GL P G+    TL ++
Sbjct: 122 GLQTHNALSSYQREYGLYPDGICGPETLRSL 152


>gi|240168399|ref|ZP_04747058.1| hydrolase [Mycobacterium kansasii ATCC 12478]
          Length = 406

 Score = 71.0 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 8/72 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLS--------VAFDAYVESAVKLFQMRHGLDP 153
           L  G+ S +V  +R  L   G LD                FDA ++ AV+ FQ   GL  
Sbjct: 12  LRCGDRSAAVTEIRAALAALGMLDNPDEDLITGRHIALEVFDAELDQAVRAFQQHRGLLV 71

Query: 154 SGMVDSSTLEAM 165
            G+V  +T  A+
Sbjct: 72  DGIVGEATYRAL 83



 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
                L +++ P    +    I  E + + ++     F     + +D    I+ + T   
Sbjct: 26  AALAALGMLDNPDEDLITGRHIALEVFDAELDQAVRAFQQHRGLLVDG---IVGEATYRA 82

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
            ++A   Y+ + +R  + +    PL  G+    V  L+ RL   G       +   F   
Sbjct: 83  LKEA--SYR-LGARTLYHQFGA-PL-YGD---DVATLQARLQDLGFYTG--LVDGYFGLQ 132

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +A+  +Q  +GL P G+    TL ++
Sbjct: 133 THNALMSYQREYGLAPDGICGPETLRSL 160


>gi|325267376|ref|ZP_08134037.1| ErfK/YbiS/YcfS/YnhG family protein [Kingella denitrificans ATCC
           33394]
 gi|324981171|gb|EGC16822.1| ErfK/YbiS/YcfS/YnhG family protein [Kingella denitrificans ATCC
           33394]
          Length = 363

 Score = 71.0 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 69/232 (29%), Gaps = 71/232 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YV++NIP   L    NG++     V VG+   QT +   RI    FNP W IP SI ++
Sbjct: 78  QYVVINIPQQRLFLYNNGRLQKVYPVAVGKAMTQTTLGEHRIGAKAFNPTWHIPLSIQRE 137

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                     PG  N +    +
Sbjct: 138 ---------------------RGDGVKSVP------------------PGPRNPLGPVFV 158

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                   +
Sbjct: 159 RLGEPRLGLGIHGTSNPG---SVPGVASHGCVRMKSPDAL--------------EFARTI 201

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLDNVHVGII 420
            +  T          V   Y  A   +D      +    D Y   N+ V  +
Sbjct: 202 TSGTT----------VMVSYEMAALNQDGAGNLWLAVFRDPYNKRNLRVDAL 243


>gi|323499427|ref|ZP_08104399.1| general secretion pathway protein A [Vibrio sinaloensis DSM 21326]
 gi|323315483|gb|EGA68522.1| general secretion pathway protein A [Vibrio sinaloensis DSM 21326]
          Length = 536

 Score = 71.0 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 13/90 (14%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Y+ I     W +     L  G    +V +L   L +   L      S  +D+ +E  VKL
Sbjct: 445 YRHI-----WRQYWSTALKPGMQGEAVLQLEHHLSVL--LGQPSLNSNVYDSALEEKVKL 497

Query: 145 FQMRHGLDPSGMVDSSTLEAM------NVP 168
           FQ   GL   G+    TLE +      NVP
Sbjct: 498 FQRWQGLAVDGIAGKRTLERLESLIRENVP 527


>gi|330470820|ref|YP_004408563.1| cell wall hydrolase/autolysin [Verrucosispora maris AB-18-032]
 gi|328813791|gb|AEB47963.1| cell wall hydrolase/autolysin [Verrucosispora maris AB-18-032]
          Length = 388

 Score = 70.6 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG-LSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           +RP+  G+   +V  +R  L     L  + G     FD   E AV+ FQ   GL   G V
Sbjct: 1   MRPIRSGDRGPAVAEIRAVLTSLDLLSKATGPYDDEFDTATERAVRAFQQSRGLSVDGRV 60

Query: 158 DSSTLEAM 165
            + T  A+
Sbjct: 61  GAETWRAL 68



 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 11/139 (7%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGID-SDIPIISKETIAQTEKAI--AFYQ 86
            I A +    +        +D FD    R       S    +     A+T +A+  A ++
Sbjct: 15  EIRAVLTSLDLLSKATGPYDDEFDTATERAVRAFQQSRGLSVDGRVGAETWRALDAARWR 74

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            + +R  +  +P+ PL    +   V+ L+ERL+  G    +      +      AV  FQ
Sbjct: 75  -LGARTLYHAVPV-PL----TGEDVRSLQERLLEMGY--DTGRADAIYGIRTSRAVAQFQ 126

Query: 147 MRHGLDPSGMVDSSTLEAM 165
              GL P G     T+ A+
Sbjct: 127 REVGLTPDGTCGPHTMGAL 145


>gi|218755707|ref|ZP_03534503.1| hydrolase [Mycobacterium tuberculosis GM 1503]
 gi|254548919|ref|ZP_05139366.1| hydrolase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289764106|ref|ZP_06523484.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|289711612|gb|EFD75628.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
          Length = 406

 Score = 70.2 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHGLDP 153
           L  G+ S +V  +R  L   G LD  +             FDA ++ AV+ FQ   GL  
Sbjct: 12  LRCGDRSAAVTEIRAALTALGMLDHQEEDLTTGRNVALELFDAQLDQAVRAFQQHRGLLV 71

Query: 154 SGMVDSSTLEAM 165
            G+V  +T  A+
Sbjct: 72  DGIVGEATYRAL 83



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 21/109 (19%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNS-----------SVSVQRLRE 116
           AQ ++A+  +Q         I+    +  L      LG                V  L+ 
Sbjct: 54  AQLDQAVRAFQQHRGLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQA 113

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL   G       +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 114 RLQDLGFYTG--LVDGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 160


>gi|15843548|ref|NP_338585.1| N-acetymuramyl-L-alanine amidase-related protein [Mycobacterium
           tuberculosis CDC1551]
 gi|31795088|ref|NP_857581.1| putative hydrolase [Mycobacterium bovis AF2122/97]
 gi|57117169|ref|YP_178027.1| hydrolase [Mycobacterium tuberculosis H37Rv]
 gi|121635901|ref|YP_976124.1| putative hydrolase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|121639826|ref|YP_980050.1| putative hydrolase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663782|ref|YP_001285305.1| N-acetymuramyl-L-alanine amidase-related protein [Mycobacterium
           tuberculosis H37Ra]
 gi|148825123|ref|YP_001289877.1| hydrolase [Mycobacterium tuberculosis F11]
 gi|167969452|ref|ZP_02551729.1| hypothetical hydrolase [Mycobacterium tuberculosis H37Ra]
 gi|215405973|ref|ZP_03418154.1| hydrolase [Mycobacterium tuberculosis 02_1987]
 gi|215413843|ref|ZP_03422508.1| hydrolase [Mycobacterium tuberculosis 94_M4241A]
 gi|215425177|ref|ZP_03423096.1| hydrolase [Mycobacterium tuberculosis T92]
 gi|215432896|ref|ZP_03430815.1| hydrolase [Mycobacterium tuberculosis EAS054]
 gi|215448262|ref|ZP_03435014.1| hydrolase [Mycobacterium tuberculosis T85]
 gi|219555762|ref|ZP_03534838.1| hydrolase [Mycobacterium tuberculosis T17]
 gi|224992321|ref|YP_002647011.1| putative hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800965|ref|YP_003033967.1| hydrolase [Mycobacterium tuberculosis KZN 1435]
 gi|254366451|ref|ZP_04982495.1| hypothetical hydrolase [Mycobacterium tuberculosis str. Haarlem]
 gi|260184845|ref|ZP_05762319.1| hydrolase [Mycobacterium tuberculosis CPHL_A]
 gi|260198975|ref|ZP_05766466.1| hydrolase [Mycobacterium tuberculosis T46]
 gi|260203128|ref|ZP_05770619.1| hydrolase [Mycobacterium tuberculosis K85]
 gi|289441358|ref|ZP_06431102.1| hydrolase [Mycobacterium tuberculosis T46]
 gi|289445516|ref|ZP_06435260.1| hydrolase [Mycobacterium tuberculosis CPHL_A]
 gi|289556183|ref|ZP_06445393.1| hydrolase [Mycobacterium tuberculosis KZN 605]
 gi|289567871|ref|ZP_06448098.1| hydrolase [Mycobacterium tuberculosis T17]
 gi|289572567|ref|ZP_06452794.1| hydrolase [Mycobacterium tuberculosis K85]
 gi|289747759|ref|ZP_06507137.1| hydrolase [Mycobacterium tuberculosis 02_1987]
 gi|289748453|ref|ZP_06507831.1| hydrolase [Mycobacterium tuberculosis T92]
 gi|289756050|ref|ZP_06515428.1| hydrolase [Mycobacterium tuberculosis EAS054]
 gi|289760088|ref|ZP_06519466.1| hydrolase [Mycobacterium tuberculosis T85]
 gi|297636602|ref|ZP_06954382.1| hydrolase [Mycobacterium tuberculosis KZN 4207]
 gi|297733597|ref|ZP_06962715.1| hydrolase [Mycobacterium tuberculosis KZN R506]
 gi|298527387|ref|ZP_07014796.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306778809|ref|ZP_07417146.1| hydrolase [Mycobacterium tuberculosis SUMu002]
 gi|306791520|ref|ZP_07429822.1| hydrolase [Mycobacterium tuberculosis SUMu005]
 gi|306795585|ref|ZP_07433887.1| hydrolase [Mycobacterium tuberculosis SUMu006]
 gi|307086717|ref|ZP_07495830.1| hydrolase [Mycobacterium tuberculosis SUMu012]
 gi|313660928|ref|ZP_07817808.1| hydrolase [Mycobacterium tuberculosis KZN V2475]
 gi|7478145|pir||C70851 probable hydrolase - Mycobacterium tuberculosis (strain H37RV)
 gi|13883926|gb|AAK48399.1| N-acetymuramyl-L-alanine amidase-related protein [Mycobacterium
           tuberculosis CDC1551]
 gi|31620686|emb|CAD96132.1| PUTATIVE HYDROLASE [Mycobacterium bovis AF2122/97]
 gi|38490393|emb|CAE55652.1| PROBABLE HYDROLASE [Mycobacterium tuberculosis H37Rv]
 gi|121491548|emb|CAL70005.1| Putative hydrolase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|121495474|emb|CAL73963.1| Putative hydrolase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|134151963|gb|EBA44008.1| hypothetical hydrolase [Mycobacterium tuberculosis str. Haarlem]
 gi|148507934|gb|ABQ75743.1| N-acetymuramyl-L-alanine amidase-related protein [Mycobacterium
           tuberculosis H37Ra]
 gi|148723650|gb|ABR08275.1| hypothetical hydrolase [Mycobacterium tuberculosis F11]
 gi|224775437|dbj|BAH28243.1| putative hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322469|gb|ACT27072.1| hydrolase [Mycobacterium tuberculosis KZN 1435]
 gi|289414277|gb|EFD11517.1| hydrolase [Mycobacterium tuberculosis T46]
 gi|289418474|gb|EFD15675.1| hydrolase [Mycobacterium tuberculosis CPHL_A]
 gi|289440815|gb|EFD23308.1| hydrolase [Mycobacterium tuberculosis KZN 605]
 gi|289536998|gb|EFD41576.1| hydrolase [Mycobacterium tuberculosis K85]
 gi|289541624|gb|EFD45273.1| hydrolase [Mycobacterium tuberculosis T17]
 gi|289688287|gb|EFD55775.1| hydrolase [Mycobacterium tuberculosis 02_1987]
 gi|289689040|gb|EFD56469.1| hydrolase [Mycobacterium tuberculosis T92]
 gi|289696637|gb|EFD64066.1| hydrolase [Mycobacterium tuberculosis EAS054]
 gi|289715652|gb|EFD79664.1| hydrolase [Mycobacterium tuberculosis T85]
 gi|298497181|gb|EFI32475.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308328146|gb|EFP16997.1| hydrolase [Mycobacterium tuberculosis SUMu002]
 gi|308339869|gb|EFP28720.1| hydrolase [Mycobacterium tuberculosis SUMu005]
 gi|308343881|gb|EFP32732.1| hydrolase [Mycobacterium tuberculosis SUMu006]
 gi|308363867|gb|EFP52718.1| hydrolase [Mycobacterium tuberculosis SUMu012]
 gi|323717331|gb|EGB26536.1| hydrolase [Mycobacterium tuberculosis CDC1551A]
 gi|328460693|gb|AEB06116.1| hydrolase [Mycobacterium tuberculosis KZN 4207]
          Length = 406

 Score = 70.2 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHGLDP 153
           L  G+ S +V  +R  L   G LD  +             FDA ++ AV+ FQ   GL  
Sbjct: 12  LRCGDRSAAVTEIRAALTALGMLDHQEEDLTTGRNVALELFDAQLDQAVRAFQQHRGLLV 71

Query: 154 SGMVDSSTLEAM 165
            G+V  +T  A+
Sbjct: 72  DGIVGEATYRAL 83



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 21/109 (19%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNS-----------SVSVQRLRE 116
           AQ ++A+  +Q         I+    +  L      LG                V  L+ 
Sbjct: 54  AQLDQAVRAFQQHRGLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQA 113

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL   G       +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 114 RLQDLGFYTG--LVDGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 160


>gi|327480636|gb|AEA83946.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas stutzeri DSM 4166]
          Length = 321

 Score = 70.2 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 45/182 (24%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++NI    +     GK V     + +GR    +P+  +RI  +  NP
Sbjct: 89  RFILPPGPREG-IVINIAEYRMYYYPEGKNVVHTFPLGIGREGWGSPVGTARITAMTSNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P+SI +++                                  ++ +         P
Sbjct: 148 AWYPPKSI-REE----------------------------------HAADGDPLPTVVPP 172

Query: 303 GKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKD 359
           G  N +   K+           H + +   F   +R  + GC R+   N+++L   +   
Sbjct: 173 GPDNPLGPYKMSLSLPGYLI--HGSNKK--FGIGMR-VSHGCFRMLNHNVLELAKMVKVG 227

Query: 360 TP 361
           TP
Sbjct: 228 TP 229


>gi|326905748|gb|EGE52681.1| hydrolase [Mycobacterium tuberculosis W-148]
          Length = 406

 Score = 70.2 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHGLDP 153
           L  G+ S +V  +R  L   G LD  +             FDA ++ AV+ FQ   GL  
Sbjct: 12  LRCGDRSAAVTEIRAALTALGMLDHQEEDLTTGRNVALELFDAQLDQAVRAFQQHRGLLV 71

Query: 154 SGMVDSSTLEAM 165
            G+V  +T  A+
Sbjct: 72  DGIVGEATYRAL 83



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 21/109 (19%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNS-----------SVSVQRLRE 116
           AQ ++A+  +Q         I+    +  L      LG                V  L+ 
Sbjct: 54  AQLDQAVRAFQQHRGLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQA 113

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL   G       +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 114 RLQDLGFYTG--LVDGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 160


>gi|296134424|ref|YP_003641671.1| spore cortex-lytic enzyme [Thermincola sp. JR]
 gi|296033002|gb|ADG83770.1| spore cortex-lytic enzyme [Thermincola potens JR]
          Length = 229

 Score = 70.2 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L+ G+    V +L+ RL   G       +   F A    AVK FQ +HGL P G+V  +
Sbjct: 32  TLYWGSKGSDVIKLQTRLKDWGYFKG--PVDGVFGAATSRAVKNFQRKHGLTPDGVVGPA 89

Query: 161 TLEAMNVPVDLR 172
           T  A+ +    R
Sbjct: 90  TWRALGISAFSR 101


>gi|254233397|ref|ZP_04926723.1| hypothetical protein TBCG_03842 [Mycobacterium tuberculosis C]
 gi|124603190|gb|EAY61465.1| hypothetical protein TBCG_03842 [Mycobacterium tuberculosis C]
          Length = 401

 Score = 70.2 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHGLDP 153
           L  G+ S +V  +R  L   G LD  +             FDA ++ AV+ FQ   GL  
Sbjct: 12  LRCGDRSAAVTEIRAALTALGMLDHQEEDLTTGRNVALELFDAQLDQAVRAFQQHRGLLV 71

Query: 154 SGMVDSSTLEAM 165
            G+V  +T  A+
Sbjct: 72  DGIVGEATYRAL 83



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 21/109 (19%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNS-----------SVSVQRLRE 116
           AQ ++A+  +Q         I+    +  L      LG                V  L+ 
Sbjct: 54  AQLDQAVRAFQQHRGLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQA 113

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL   G       +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 114 RLQDLGFYTG--LVDGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 160


>gi|117929357|ref|YP_873908.1| cell wall hydrolase/autolysin [Acidothermus cellulolyticus 11B]
 gi|117649820|gb|ABK53922.1| cell wall hydrolase/autolysin [Acidothermus cellulolyticus 11B]
          Length = 378

 Score = 70.2 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSV-------AFDAYVESAVKLFQMRHGLDPS 154
           + LG+ S +V  +R RL   G L  + G           FD  V+ A++ FQ + GL   
Sbjct: 7   MRLGDRSFAVAEIRHRLAHLGLLSRTNGDHDCVRAACDVFDETVDHAIRAFQQQRGLRTD 66

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 67  GVVDAETFRAL 77



 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 11/105 (10%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +P  PL +G+    V  L+ RL   G           F    E+A++ FQ   GL   G 
Sbjct: 92  VPGHPL-VGD---DVAALQRRLCDMGF--DCGRCDGIFGPLTEAALREFQRNVGLPADGT 145

Query: 157 VDSSTLEAMN----VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
             + TL A+       V  R  +L+  L R++       G   VL
Sbjct: 146 CGADTLRALQRLRRTVVGGRPYELRETL-RLRHHPPTVAGKCVVL 189


>gi|54027638|ref|YP_121880.1| putative N-acetylmuramoyl-L-alanine amidase [Nocardia farcinica IFM
           10152]
 gi|54019146|dbj|BAD60516.1| putative N-acetylmuramoyl-L-alanine amidase [Nocardia farcinica IFM
           10152]
          Length = 397

 Score = 70.2 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 12/76 (15%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG------------LSVAFDAYVESAVKLFQMRH 149
           L  G++  +V  +R  L   G L    G               +FD +++SAV+ FQ   
Sbjct: 4   LRHGDTGPAVAEVRSTLASLGFLHAHAGSDESQSPEYWKDTEASFDHHLDSAVRAFQQHR 63

Query: 150 GLDPSGMVDSSTLEAM 165
           GL   G+V  +T  A+
Sbjct: 64  GLLVDGVVGPATYRAL 79



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 10/97 (10%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++   T    ++A   Y+ + +R    +L   PL  G+    V  L+ +L   G      
Sbjct: 70  VVGPATYRALKEA--SYR-LGARTLIYQLSA-PL-YGD---DVATLQRKLQDLGFY--VH 119

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   F  +   A+  FQ   GL   G+    TL ++
Sbjct: 120 RVDGYFGPHTHDALTAFQREIGLSADGICGPDTLRSL 156


>gi|23013110|ref|ZP_00053052.1| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 84

 Score = 70.2 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
           ++L   +L   P W     E +   R T  + L     V+ +Y +AW+ +  I+ FRDDI
Sbjct: 1   MELGELMLG--PRWQGKLAENIAANRSTRTLMLERTTQVYMMYWTAWTDEAGILHFRDDI 58

Query: 410 YGLDNVHVGIIPL---PEDHP 427
           YG D   +  +     P   P
Sbjct: 59  YGHDRRLMTAMERSRSPAPRP 79


>gi|83588974|ref|YP_428983.1| ErfK/YbiS/YcfS/YnhG [Moorella thermoacetica ATCC 39073]
 gi|83571888|gb|ABC18440.1| ErfK/YbiS/YcfS/YnhG [Moorella thermoacetica ATCC 39073]
          Length = 294

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +P  PL  G  S  V  L+ RL   G           +    E AVK FQ+ HGL  +G
Sbjct: 217 TMPTGPLKPGQGSPEVITLQARLREKGFYLFGPTDGD-YGLMTELAVKEFQLYHGLTATG 275

Query: 156 MVDSSTLEAM 165
           + D+ TL A+
Sbjct: 276 VADARTLRAL 285



 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 33/132 (25%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM---- 165
            V  L+ RL   G       L+  ++   + AV  FQ  H L P G V  +T + +    
Sbjct: 31  DVSDLQLRLAQMGYYFG--PLNGIYNKTTQRAVINFQREHHLTPLGRVGPATWKELARGI 88

Query: 166 -------NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
                    P   +  ++ ++  R+                     L  + +G+V  +  
Sbjct: 89  AVAHQAPAGPPPGKNLKIVIDTERL--------------------VLTILVDGRVFQKYP 128

Query: 219 VIVGRVDRQTPI 230
           V +G+    +P+
Sbjct: 129 VAIGKYTSPSPV 140


>gi|325003245|ref|ZP_08124357.1| N-acetylmuramoyl-L-alanine amidase [Pseudonocardia sp. P1]
          Length = 386

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+S  +V+ +R  L   G L    P       FD  V+ AV++FQ   GL   G+V 
Sbjct: 4   LRRGDSGPAVREIRATLRELGLLPALSPGTSDRDVFDDEVDHAVRVFQQGRGLITDGIVG 63

Query: 159 SSTLEAM 165
             T  A+
Sbjct: 64  PDTARAL 70



 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              V  L+ERL+  G        S  FD   E A+  FQ  +G+ P GM    TL A+
Sbjct: 92  GDDVATLQERLLELGYNPGRP--SGLFDQQTEQALMRFQRDYGMVPDGMCGPETLRAL 147


>gi|296167152|ref|ZP_06849559.1| N-acetylmuramoyl-l-alanine amidase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295897474|gb|EFG77073.1| N-acetylmuramoyl-l-alanine amidase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 405

 Score = 69.9 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL--------SVAFDAYVESAVKLFQMRHGLDP 153
           L  G+ S +V  +R  L   G LD  +             FDA ++ AV+ FQ   GL  
Sbjct: 12  LRCGDRSAAVTEVRATLAALGLLDIPEDDLATGRHVSPEVFDAELDQAVRAFQQHRGLLV 71

Query: 154 SGMVDSSTLEAM 165
            G+V  +T  A+
Sbjct: 72  DGIVGEATYRAL 83



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 37/115 (32%), Gaps = 18/115 (15%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRG-----GWPELPIRPLHLGNS-----------SVS 110
            P +    + Q  +A   ++ +L  G      +  L      LG                
Sbjct: 48  SPEVFDAELDQAVRAFQQHRGLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDD 107

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V  L+ RL   G       +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 108 VATLQARLQDLGFYTG--LVDGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 160


>gi|145221431|ref|YP_001132109.1| peptidoglycan binding domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315446817|ref|YP_004079696.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium sp. Spyr1]
 gi|145213917|gb|ABP43321.1| Peptidoglycan-binding domain 1 protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315265120|gb|ADU01862.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium sp. Spyr1]
          Length = 395

 Score = 69.9 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDL-DPSKGLSV-------AFDAYVESAVKLFQMRHG 150
           +  L  G+   +V  +R  L   G   DP + LS         FD  ++ AV+ FQ   G
Sbjct: 1   MSSLRRGDRGGAVAEIRAALAALGMATDPDEDLSTGKHVAADLFDDELDHAVRAFQQHRG 60

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           L   G+V  +T  A+      R+    +N
Sbjct: 61  LLVDGIVGEATYRAL-KEASYRLGARTLN 88



 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 83  AFYQDILSRGGWPELPIRPL--HLG--NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           A Y+ +        L  R L    G       V  L+ RL   G       +   F    
Sbjct: 70  ATYRALKEAS--YRLGARTLNHQFGAPMYGDDVATLQARLQDLGFYTG--LVDGHFGLQT 125

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +A+  +Q  +GL P G+    TL ++
Sbjct: 126 HNALSSYQREYGLYPDGICGPETLRSL 152


>gi|225386952|ref|ZP_03756716.1| hypothetical protein CLOSTASPAR_00702 [Clostridium asparagiforme
           DSM 15981]
 gi|225046964|gb|EEG57210.1| hypothetical protein CLOSTASPAR_00702 [Clostridium asparagiforme
           DSM 15981]
          Length = 538

 Score = 69.9 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Y   +  G    +P   L +G     V +L+ RL+  G +D +   +  +      AVK 
Sbjct: 63  YLADVDLGDAEPIPDY-LRIGVRHAIVAKLQARLMELGFMD-NDEPTDYYGEMTVQAVKH 120

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           FQ ++ L   G+V +ST +A+ +  D +
Sbjct: 121 FQRQNELAQDGIVGNSTWDAI-MSPDAK 147



 Score = 58.3 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L LG    +V+R+++ L   G L     ++  +    ++AVK FQ R+GL   
Sbjct: 288 PNARSNGLMLGERGDAVKRMQQLLSKHGYLYSGN-VTGYYGEATQTAVKNFQSRNGLSVD 346

Query: 155 GMVDSSTLEAM 165
           G+V   TL  +
Sbjct: 347 GLVGVQTLAKL 357



 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V   ++RL   G L      +  +      A+K FQ R+     G +  ST
Sbjct: 224 LSYGEKSDVVLACQKRLKELGYLTTEPDGT--YGEDTAIAIKQFQARNDQIVDGYLGPST 281

Query: 162 LEAMNVPVDLRIRQLQV 178
             A++   + R   L +
Sbjct: 282 RMALD-SPNARSNGLML 297



 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 6/94 (6%)

Query: 77  QTEKAIAFYQDILSRGGW-----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           Q +  +A    I+    W     P+     +  G     +QR+++RL   G L  +  ++
Sbjct: 122 QRQNELAQ-DGIVGNSTWDAIMSPDAKYYAVSKGTQGDDIQRIQQRLYELGYLATADLVT 180

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             F    E+AV   Q  +GL+  G V   T+  +
Sbjct: 181 GNFGDSTEAAVLKLQEVNGLNMDGKVGQKTINLL 214


>gi|330839341|ref|YP_004413921.1| NLP/P60 protein [Selenomonas sputigena ATCC 35185]
 gi|329747105|gb|AEC00462.1| NLP/P60 protein [Selenomonas sputigena ATCC 35185]
          Length = 220

 Score = 69.9 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                +G+    V  ++ RL   G    + G    F      AVK FQ  HGL+  G+V 
Sbjct: 23  ASAFRIGDQGSDVAEIQGRLASLGYDVAADGD---FGPATAEAVKAFQSAHGLEADGLVG 79

Query: 159 SSTLEAM 165
           S+T  A+
Sbjct: 80  SATYSAL 86


>gi|260886859|ref|ZP_05898122.1| endopeptidase, cell wall lytic activity [Selenomonas sputigena ATCC
           35185]
 gi|260863458|gb|EEX77958.1| endopeptidase, cell wall lytic activity [Selenomonas sputigena ATCC
           35185]
          Length = 216

 Score = 69.9 bits (170), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                +G+    V  ++ RL   G    + G    F      AVK FQ  HGL+  G+V 
Sbjct: 19  ASAFRIGDQGSDVAEIQGRLASLGYDVAADGD---FGPATAEAVKAFQSAHGLEADGLVG 75

Query: 159 SSTLEAM 165
           S+T  A+
Sbjct: 76  SATYSAL 82


>gi|261253884|ref|ZP_05946457.1| general secretion pathway protein A [Vibrio orientalis CIP 102891]
 gi|260937275|gb|EEX93264.1| general secretion pathway protein A [Vibrio orientalis CIP 102891]
          Length = 540

 Score = 69.5 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 15/149 (10%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARV---DMGIDSDIPIISKETIAQTEKA 81
           +L    +  + LDE++  +   +++ + D          +  +    +I  + +    + 
Sbjct: 379 ALFRCQLDQASLDELVQANRPVLLSLQIDEQPRFAILYSVSGEQVELLIGSQLVTFDRQW 438

Query: 82  IA-----FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
           +A      Y+ I     W       L  G S   + +L + L     L   + +S  FD+
Sbjct: 439 LASIWQGQYRHI-----WQSYWSETLKQGMSGEEIAQLDKALSQV--LGEPESVSEYFDS 491

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            V+  V+LFQ   GL   G+    TL  +
Sbjct: 492 DVKRKVELFQRWQGLSVDGIAGKKTLRLL 520


>gi|298370231|ref|ZP_06981547.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298281691|gb|EFI23180.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 350

 Score = 69.1 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 71/233 (30%), Gaps = 71/233 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +G++     V VG+   QT +   +I    FNP W IP+SI ++
Sbjct: 49  QHVFINIPQQRLFIYTDGQLTKAYPVAVGKSMTQTTLGEHKIGVKAFNPTWHIPQSIQKE 108

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                     PG  N +    +
Sbjct: 109 ---------------------RGDGVKSVP------------------PGPKNPLGPVFV 129

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                   +
Sbjct: 130 RLGDPKLGLGIHGTNTP---ASVPGIRSHGCVRMKSPDAL--------------EFATTI 172

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLDNVHVGIIP 421
            T            P + +Y  A   +D+     +    D Y   N++   + 
Sbjct: 173 TTGS----------PAYVIYQMASLNEDANKNLWLAAYRDPYNKKNLNTDALR 215


>gi|238020377|ref|ZP_04600803.1| hypothetical protein GCWU000324_00257 [Kingella oralis ATCC 51147]
 gi|237867357|gb|EEP68363.1| hypothetical protein GCWU000324_00257 [Kingella oralis ATCC 51147]
          Length = 331

 Score = 69.1 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 53/158 (33%), Gaps = 43/158 (27%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           V++NIP   L   ++G +     V VG+   QT I   +I    FNP W IP SI ++  
Sbjct: 52  VVINIPQQRLFLFKDGSLKKVYPVGVGKAMSQTNIGEHKIGAKAFNPTWHIPLSIQKE-- 109

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                 G +                     PG  N +    +  
Sbjct: 110 -------------------RGDGVKSVP------------------PGPKNPLGPVFVRL 132

Query: 316 YSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            +      +H T  P    +V    + GCVR+++   L
Sbjct: 133 GNPKLGLGIHGTSNP---ASVPGVVSHGCVRMKSPDAL 167


>gi|330448220|ref|ZP_08311868.1| lysM domain protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492411|dbj|GAA06365.1| lysM domain protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 300

 Score = 69.1 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 63/188 (33%), Gaps = 53/188 (28%)

Query: 189 QKMGLRYVLVNIPAASLEAV--ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             +  + ++VN+    L     ++        + +GRV R+TP + + IN  + NP W  
Sbjct: 87  PDVSHKGIVVNLAELRLYYFPKDDASKVYIFPIGIGRVGRETPSMTTTINEKVKNPTWTP 146

Query: 247 PRSI-----IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P SI      + D++  +                                          
Sbjct: 147 PASIRKEHAARGDILPAVV----------------------------------------P 166

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            G  N +   K+     +  Y +H T +   F   +R  + GC+R+ N  D+  WL    
Sbjct: 167 AGPDNPLGDYKMRLAYGHGEYLIHGTNKD--FGIGMR-VSGGCIRM-NPWDV-EWLFPHV 221

Query: 361 PTWSRYHI 368
              ++  I
Sbjct: 222 ALGTQVRI 229


>gi|325927742|ref|ZP_08188970.1| putative chitinase [Xanthomonas perforans 91-118]
 gi|325541943|gb|EGD13457.1| putative chitinase [Xanthomonas perforans 91-118]
          Length = 584

 Score = 69.1 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 12/121 (9%)

Query: 64  DSDIPIISKETI---AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           D++  + S ET        +A A +    +  G        L  G++S  V +L++ L  
Sbjct: 356 DANGKLTSPETFWNQGHQHEAGARHTQAAAASG-----TGALRHGDNSQDVGKLQQDLNR 410

Query: 121 SGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQL 176
            G  D           F      AV  FQ +HGL   G+V   T  A+   P   R  Q+
Sbjct: 411 LGVRDAQGNRLAEDGRFGDNTREAVMAFQKQHGLQQDGVVGRDTRAALAAQPAQTREAQV 470

Query: 177 Q 177
            
Sbjct: 471 A 471


>gi|223984154|ref|ZP_03634305.1| hypothetical protein HOLDEFILI_01598 [Holdemania filiformis DSM
           12042]
 gi|223963886|gb|EEF68247.1| hypothetical protein HOLDEFILI_01598 [Holdemania filiformis DSM
           12042]
          Length = 262

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +P   +  G+ +  V   ++ L   G   P   +S  FDA ++ AV+ FQ  HGL   G+
Sbjct: 180 VPFTQIQKGDKNTEVCVAQDALWALGY--PITKISGVFDAELDQAVRAFQRDHGLVADGI 237

Query: 157 VDSSTLEAM 165
           +   T EA+
Sbjct: 238 LGKLTWEAL 246


>gi|41410439|ref|NP_963275.1| CwlM [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118465835|ref|YP_884413.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium avium 104]
 gi|41399273|gb|AAS06891.1| CwlM [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118167122|gb|ABK68019.1| putative N-acetylmuramoyl-L-alanine amidase [Mycobacterium avium
           104]
          Length = 406

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 8/72 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHGLDP 153
           L  G+ S +V  +R  L   G L  +              FDA ++ AV+ FQ   GL  
Sbjct: 12  LRCGDRSAAVTEIRATLASLGLLASADEDLSTGRHVALELFDAELDQAVRAFQQHRGLLV 71

Query: 154 SGMVDSSTLEAM 165
            G+V  +T  A+
Sbjct: 72  DGIVGEATYRAL 83



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 22/94 (23%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLS 131
           A Y+ +               LG                V  L+ RL   G       + 
Sbjct: 78  ATYRALKEA---------SYRLGARTLYHQFGAPLYGDDVATLQARLQDLGFYTG--LVD 126

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             F     +A+  +Q  +GL   G+    TL ++
Sbjct: 127 GYFGLQTHNALMSYQREYGLSADGICGPETLRSL 160


>gi|260769654|ref|ZP_05878587.1| hypothetical protein VFA_002712 [Vibrio furnissii CIP 102972]
 gi|260614992|gb|EEX40178.1| hypothetical protein VFA_002712 [Vibrio furnissii CIP 102972]
 gi|315182349|gb|ADT89262.1| hypothetical protein vfu_B01066 [Vibrio furnissii NCTC 11218]
          Length = 308

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 42/175 (24%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+    L   E   +      V +GR+ R TP + + I++   NP W  P+SI +++
Sbjct: 96  IVVNLAELRLYYFEPETRKVHIFPVGIGRIGRDTPEMETVISQKRPNPTWTPPQSI-RQE 154

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +A   + P  +                                    G  N +    + 
Sbjct: 155 YLAKGIELPAVV----------------------------------PAGPENPLGEYALR 180

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
               N  Y +H T +   F   +R  +SGC+R+ +  D+  WL +      +  I
Sbjct: 181 LGYGNGEYLIHGTNKD--FGIGMR-VSSGCIRM-DPKDI-EWLFQQVQRGEKVRI 230


>gi|260424725|ref|ZP_05778983.1| endopeptidase, cell wall lytic activity [Dialister invisus DSM
           15470]
 gi|260402963|gb|EEW96510.1| endopeptidase, cell wall lytic activity [Dialister invisus DSM
           15470]
          Length = 246

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
              LG+S  +V+ L+ RL  +G L  + G    F+    SAVK FQ +H LD  G+V   
Sbjct: 25  SYSLGDSGDAVKDLQRRLTQAGCLVRADG---RFNETTVSAVKKFQKKHNLDVDGVVGPV 81

Query: 161 TLEAM 165
           T +A+
Sbjct: 82  TYKAL 86


>gi|254777652|ref|ZP_05219168.1| putative N-acetylmuramoyl-L-alanine amidase [Mycobacterium avium
           subsp. avium ATCC 25291]
          Length = 406

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 8/72 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHGLDP 153
           L  G+ S +V  +R  L   G L  +              FDA ++ AV+ FQ   GL  
Sbjct: 12  LRCGDRSAAVTEIRATLASLGLLASADEDLSTGRHVALELFDAELDQAVRAFQQHRGLLV 71

Query: 154 SGMVDSSTLEAM 165
            G+V  +T  A+
Sbjct: 72  DGIVGEATYRAL 83



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 22/94 (23%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLS 131
           A Y+ +               LG                V  L+ RL   G       + 
Sbjct: 78  ATYRALKEA---------SYRLGARTLYHQFGAPLYGDDVATLQARLQDLGFYTG--LVD 126

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             F     +A+  +Q  +GL   G+    TL ++
Sbjct: 127 GYFGLQTHNALMSYQREYGLSADGICGPETLRSL 160


>gi|15808975|gb|AAL08577.1|AF418548_3 N-acetylmuramoyl-l-alanine amidase [Mycobacterium avium subsp.
           paratuberculosis]
          Length = 406

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 8/72 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHGLDP 153
           L  G+ S +V  +R  L   G L  +              FDA ++ AV+ FQ   GL  
Sbjct: 12  LRCGDRSAAVTEIRATLASLGLLASADEDLSTGRHVALELFDAELDQAVRAFQQHRGLLV 71

Query: 154 SGMVDSSTLEAM 165
            G+V  +T  A+
Sbjct: 72  DGIVGEATYRAL 83



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 28/94 (29%), Gaps = 22/94 (23%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLS 131
           A Y+ +               LG                V  L+ RL   G       + 
Sbjct: 78  ATYRALKEA---------SYRLGARTLYHQFGAPLYGDDVATLQARLQDLGFYTG--LVD 126

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             F     +A+  +Q  +GL   G+    TL ++
Sbjct: 127 GYFGLQTHNALMSYQREYGLSADGICGPETLRSL 160


>gi|114567178|ref|YP_754332.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338113|gb|ABI68961.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 283

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 53/140 (37%), Gaps = 12/140 (8%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +  S   +  +++RL   G     +     F    E+A+K FQ   GL   G+VD +T 
Sbjct: 12  KIRMSGPDIHLMQKRLKELGYNPGVEDG--IFGEQSEAALKAFQASRGLVVDGVVDPNT- 68

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             + +     IR     L   ++   Q      + +++    L    +G       V VG
Sbjct: 69  -WLLLEPSSSIR-----LQNKRE--GQAWEQPRISIDVVKRRLTYT-SGSFKKTYPVAVG 119

Query: 223 RVDRQTPILHSRINRIMFNP 242
           +    TP+ +  I +   NP
Sbjct: 120 KPQTPTPLGNWTIVQKTVNP 139



 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 7/80 (8%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V+ ++  L   G           F    E+AV  FQ  + L   G+V  
Sbjct: 207 RVLSRGDQGSDVKEVQRMLRTLGYYRVKPDG--KFGPKTEAAVIAFQRDNQLIADGIVGP 264

Query: 160 STLEAMNVPVDLRIRQLQVN 179
            T  A+      +   L +N
Sbjct: 265 YTHHAL-----QKAYDLAIN 279


>gi|312898059|ref|ZP_07757465.1| 3D domain protein [Megasphaera micronuciformis F0359]
 gi|310620884|gb|EFQ04438.1| 3D domain protein [Megasphaera micronuciformis F0359]
          Length = 166

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG +   V  ++  LI +G L  + G    F +  ++AV+ FQ  HGL   G+V + T+ 
Sbjct: 6   LGMTGTRVASVQNMLIGTGYL--TDGADGVFGSGTQAAVQRFQADHGLTADGIVGTQTMN 63

Query: 164 AM 165
           A+
Sbjct: 64  AL 65


>gi|266620407|ref|ZP_06113342.1| endopeptidase, cell wall lytic activity [Clostridium hathewayi DSM
           13479]
 gi|288867984|gb|EFD00283.1| endopeptidase, cell wall lytic activity [Clostridium hathewayi DSM
           13479]
          Length = 513

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V  L++RL+  G +D +   +  F    ESAVK FQ ++ L   G+V   T
Sbjct: 87  LRNGVEHPIVASLQQRLMDLGFMD-NDEPTQYFGTMTESAVKTFQRQNHLAQDGIVGPET 145

Query: 162 LEAMNVPVDLR 172
           L A+ +    +
Sbjct: 146 LNAI-MTPSAK 155



 Score = 63.7 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V   + RL   G L  +     A+     +AVK FQ R+ L   G +  ST
Sbjct: 232 LSYGEKSDVVLACQTRLKELGYLTTTPDG--AYGDDTAAAVKQFQARNDLVVDGYLGPST 289

Query: 162 LEAMNVPVDLRIRQLQV 178
             A+N   + +   L +
Sbjct: 290 RVALN-SAEAQANGLML 305



 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L LG    +V R+++ L   G L  S  ++  +    E AVK FQ  +GL   G V 
Sbjct: 300 ANGLMLGEQGETVTRIQQLLNKYGYLS-SANVTGYYGEVTEKAVKSFQSSNGLTADGSVG 358

Query: 159 SSTLEAMNVPVDLRI 173
             T+  +      + 
Sbjct: 359 RQTMNKLTGSNVKKA 373



 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              ++R++ RL   G L     ++  F    E+AV   Q  +GL+  G V   T+  +
Sbjct: 165 GDDIKRIQNRLYELGYLATGDLVTGHFGDDTEAAVIKLQEVNGLNVDGKVGRQTINLL 222


>gi|187939515|gb|ACD38663.1| putative peptidoglycan-binding domain-containing protein
           [Pseudomonas aeruginosa]
          Length = 268

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ S  V++L+ RL        +      F A  E AV+ FQ  HGL   G+    
Sbjct: 2   TLRYGDRSQEVRQLQRRLNTW--AGANLYEDGHFGAATEDAVRAFQRSHGLVADGIAGPK 59

Query: 161 TLEAM 165
           TL A+
Sbjct: 60  TLAAL 64


>gi|218672072|ref|ZP_03521741.1| hypothetical protein RetlG_10705 [Rhizobium etli GR56]
          Length = 58

 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
             +   VK+  +VPV+  Y +AW  KD ++++ DD+YG D             
Sbjct: 1   NGQNHAVKVPQKVPVYVSYFTAWPNKDGVVEYFDDVYGRDTYVKKAFDATTKA 53


>gi|307943635|ref|ZP_07658979.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307773265|gb|EFO32482.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 399

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 47/128 (36%), Gaps = 18/128 (14%)

Query: 50  DRFDNFLARVDMGID------------SDIPIISKETIAQTEKAIAFYQDILSRGGWPEL 97
           D F  FL R  +  D             + P   K   A   +A   Y  +         
Sbjct: 156 DAFIRFLERSGLSQDLREADFEAIARRYNGPGQVKHYAALMRRA---YAKLGGDQSDTHK 212

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            +  L LG+    V+ L++RL   G      G    F    + AV  FQ+ HGL P G+V
Sbjct: 213 DVNLLKLGSEGYRVEALQKRLASLGYTLRPDGD---FGPATKRAVVGFQVDHGLTPDGVV 269

Query: 158 DSSTLEAM 165
              T EA+
Sbjct: 270 GPKTQEAL 277


>gi|294668409|ref|ZP_06733512.1| hypothetical protein NEIELOOT_00327 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309727|gb|EFE50970.1| hypothetical protein NEIELOOT_00327 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 317

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 69/233 (29%), Gaps = 71/233 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            +V++NIP   L    +GK+     V VG+   QT +   +I    FNP W IP+SI QK
Sbjct: 32  HHVVINIPQQRLFLYTDGKLAKIYPVAVGKAMTQTNLGSHKIGAKAFNPIWHIPKSI-QK 90

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           ++                      G                       PG  N +    +
Sbjct: 91  EL--------------------NNGVTSIP------------------PGPKNPLGPVFV 112

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 113 RLGDPKLGLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------QFAKTI 155

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF----RDDIYGLDNVHVGIIP 421
            T            P   +Y  A    D           D Y   N++   + 
Sbjct: 156 TTGS----------PADVIYQMAALNVDGAGNLWLAAYRDPYNKKNLNTAALR 198


>gi|17313229|ref|NP_490609.1| hypothetical protein phiCTXp12 [Pseudomonas phage phiCTX]
 gi|4063783|dbj|BAA36237.1| unnamed protein product [Pseudomonas phage phiCTX]
          Length = 268

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ S  V +L+ RL        +      F A  E AV+ FQ  HGL   G+    
Sbjct: 2   TLRYGDRSQEVLQLQRRLNTW--AGANLYEDGHFGAATEDAVRAFQRSHGLVADGIAGPK 59

Query: 161 TLEAM 165
           TL A+
Sbjct: 60  TLAAL 64


>gi|307943228|ref|ZP_07658573.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307774024|gb|EFO33240.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 399

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            A   +A   YQ I   G     P  R L LG+    V+ L+ERLI  G    + G    
Sbjct: 190 YASLMQA--AYQRIGKSGETTSNPRGRMLRLGSEGYRVKALQERLITLGYHLQADGD--- 244

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           F       V  FQ+ HGL P G+V   T E M+  V +   ++
Sbjct: 245 FGPATRRQVVAFQVDHGLKPDGVVGPLTEERMDEAVPINASKI 287


>gi|75907389|ref|YP_321685.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701114|gb|ABA20790.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 412

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 6/78 (7%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   SV+ L+++L  +G       ++  +D   E AV+ FQ   GL   G+V +ST
Sbjct: 66  LERGDQGPSVRNLQQKLQQAGFY--QAPVTQVYDFSTEEAVRRFQEAAGLPVDGVVGAST 123

Query: 162 LEAMN----VPVDLRIRQ 175
           LE ++     PV  +++Q
Sbjct: 124 LEKLDQWRSTPVANQVQQ 141



 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+ L++RL ++G    +   +  F    E AVK FQ  + LD  G+V  +T
Sbjct: 204 LVKGDEGEAVRSLQQRLRVAGFYYGNA--TGVFGPITEEAVKRFQTAYKLDVDGIVGPAT 261

Query: 162 LEAM 165
           +  +
Sbjct: 262 IRRL 265



 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+   +V+ L+E+LI +G L      +  F  Y   AVK FQ  + L  SG+   +
Sbjct: 286 KLTVGDRGEAVRVLQEQLIQAGYLQGQP--NGYFGPYTAEAVKRFQAANYLSASGIAGPT 343

Query: 161 TLEAM 165
           T   +
Sbjct: 344 TRAKL 348


>gi|68537190|ref|YP_251895.1| putative hydrolase [Corynebacterium jeikeium K411]
 gi|260579551|ref|ZP_05847422.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           jeikeium ATCC 43734]
 gi|68264789|emb|CAI38277.1| putative hydrolase [Corynebacterium jeikeium K411]
 gi|258602322|gb|EEW15628.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           jeikeium ATCC 43734]
          Length = 395

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 15/93 (16%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSV------------AFDAYVESAVKLFQMRH 149
           L +G+ S  V  +R  L   G L+  +G +              FD  +  A+K FQ + 
Sbjct: 6   LQVGDRSPRVAEVRGTLARLGLLEGYEGDATGSKSQRWTSEEEVFDETLAEALKAFQQQR 65

Query: 150 GLDPSGMVDSSTLEAM---NVPVDLRIRQLQVN 179
           G+   G +   TL A+   +  +  R+  LQ N
Sbjct: 66  GIIADGTITPGTLRALREASYTLGARVLSLQSN 98



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 30/148 (20%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGNS----------SVSVQRLRER 117
           ET+A+  KA    + I++ G      +R L      LG               V +L+ +
Sbjct: 52  ETLAEALKAFQQQRGIIADGTITPGTLRALREASYTLGARVLSLQSNQFVGDDVAQLQTQ 111

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN--------VPV 169
           L   G    +  +   F     SAV  +Q+ +GL+  G+V   TL A++           
Sbjct: 112 LHDLGFY--TSRVDGHFGPRTHSAVVNYQLNYGLNNDGVVGPDTLRALSYLGRRITGGSP 169

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
                +      +I+    Q  G R V+
Sbjct: 170 QSIREK-----EQIRSAGPQLTGKRVVI 192


>gi|323496502|ref|ZP_08101560.1| hypothetical protein VISI1226_13136 [Vibrio sinaloensis DSM 21326]
 gi|323318779|gb|EGA71732.1| hypothetical protein VISI1226_13136 [Vibrio sinaloensis DSM 21326]
          Length = 301

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 67/197 (34%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           V++N+    L   E N  +     V +GRV R TP + + I++   NP W  P SI +K+
Sbjct: 93  VVINLAELRLYYFEPNTDLVHIFPVGIGRVGRDTPEMTTTISQKRPNPTWTPPASI-RKE 151

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +A   + P  +                                    G  N +    + 
Sbjct: 152 YLAKGIELPAVV----------------------------------PAGPENPLGEYALR 177

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                  Y +H T +   F   +R  +SGC+R+ +  D+  WL        +  +     
Sbjct: 178 LAHGAGDYLIHGTNKD--FGIGLR-VSSGCIRM-DPKDI-DWLFPRVNLGDKVRV----- 227

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 228 INEPIKVSLEPDRSVFI 244


>gi|118470140|ref|YP_891129.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium smegmatis str.
           MC2 155]
 gi|118171427|gb|ABK72323.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium smegmatis str.
           MC2 155]
          Length = 396

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISG-------DLDPSKGLS-VAFDAYVESAVKLFQMRHG 150
           +  L  G+   +V  +R  L   G       DL   + ++   FD  ++ AV+ FQ   G
Sbjct: 1   MSSLRRGDRGGAVTEIRAALAALGLIENPDTDLSTGRHVALDVFDDELDHAVRAFQQHRG 60

Query: 151 LDPSGMVDSSTLEAM 165
           L   G+V  +T  A+
Sbjct: 61  LLVDGIVGEATYRAL 75



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V  L+ RL   G       +   F     +A+  +Q  +GL P G+    TL ++
Sbjct: 95  MYGDDVATLQARLQDLGFYTG--LVDGYFGLQTHNALMSYQREYGLYPDGICGPETLRSL 152


>gi|298243007|ref|ZP_06966814.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
 gi|297556061|gb|EFH89925.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
          Length = 545

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L I     G++  +V  L+ +L   G    S  +   F     +AVK FQ  HGL  
Sbjct: 105 WPAL-IVTTSQGSTGSAVLALQRQLNAHG---ASLSVDGQFGPATAAAVKSFQSSHGLSA 160

Query: 154 SGMVDSSTLEAMNVPVDLRI 173
            G+    T  A+      + 
Sbjct: 161 DGVAGPQTWNALVGSKSSQA 180



 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 8/82 (9%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
               WP++       G +  +V  ++  L   G    S  +  +F     S  K FQ  H
Sbjct: 179 QAYSWPDIGQ-----GATGENVYSIQLMLQAHGY---SLPIDGSFGPQTASTAKAFQSAH 230

Query: 150 GLDPSGMVDSSTLEAMNVPVDL 171
           GL   G+V   T   + V    
Sbjct: 231 GLGADGIVGPQTWPVLIVTTSQ 252



 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 8/81 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
              WP +       G++   V  ++  L   G    + G+          AV  FQ   G
Sbjct: 42  AYAWPLIGQ-----GSTGEDVYSVQLMLQARGYSLSTDGIDG---PQTTGAVVSFQSAQG 93

Query: 151 LDPSGMVDSSTLEAMNVPVDL 171
           L   G+V   T  A+ V    
Sbjct: 94  LQADGVVGPQTWPALIVTTSQ 114



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 4/78 (5%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           I+    WP L I     G++  +V  L+ +L   G    S  +   F +  E+AVK +Q 
Sbjct: 237 IVGPQTWPVL-IVTTSQGSTGSAVLALQRQLNAHG---ASLSVDGQFGSATETAVKNYQS 292

Query: 148 RHGLDPSGMVDSSTLEAM 165
              L   G+       ++
Sbjct: 293 SQKLSVDGVAGPQIWSSL 310


>gi|227111739|ref|ZP_03825395.1| hypothetical protein PcarbP_02182 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 340

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 72/208 (34%), Gaps = 46/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     GK   +   + +G++ R TP++ + I+    NP W
Sbjct: 89  MLLPDTPREGIVVNLAELRLYYYPKGKNTVIVYPIGIGQLGRNTPLMTTSISEKRENPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL++  I +                             G 
Sbjct: 149 T-PTANIRK----------HYLEEQGIKL-----------------------PAVVPAGP 174

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L  + P  
Sbjct: 175 DNPMGLHALRLSAHGGVYLLHGTNAD--FGIGMR-VSSGCIRL-RPDDI-KALFDNVPVG 229

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       I+  V+      V++   +
Sbjct: 230 TRVQIVNDAIKTSVEPDGKRYVEVHQPL 257


>gi|89897696|ref|YP_521183.1| hypothetical protein DSY4950 [Desulfitobacterium hafniense Y51]
 gi|89337144|dbj|BAE86739.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 231

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           IL+ G +  L  R L  G+    V  L+++L   G +     +   + +  ++AV  FQ 
Sbjct: 22  ILASGAYGALGDRALSQGSRGSEVTELQKKLASLGYVVG--KVDGVYGSKTKAAVTRFQK 79

Query: 148 RHGLDPSGMVDSSTLEAM 165
             GL   G+  + T++ +
Sbjct: 80  ERGLKVDGIAGAQTIKEL 97


>gi|15616233|ref|NP_244538.1| cell wall lytic activity [Bacillus halodurans C-125]
 gi|10176295|dbj|BAB07390.1| cell wall lytic activity [Bacillus halodurans C-125]
          Length = 416

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G S   V+ L+E L   G  +     +  F +  E AV+ FQM+HGL   G
Sbjct: 32  ALGDQTLRKGQSHPDVKELQEALKKKGFFN-YHTSTGYFGSITEDAVREFQMKHGLQVDG 90

Query: 156 MVDSSTLEAM 165
           +    TL A+
Sbjct: 91  IAGPQTLNAL 100



 Score = 63.7 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 6/102 (5%)

Query: 69  IISKETIAQT-EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
           I   +T+A    +A A       +   P      L  G+   +V+ L+  L   G    S
Sbjct: 179 IAGPQTLAALTNQAPA---ASAPQYNAPVQQTTVLRQGSRGDAVRDLQRSLKDLGYYKSS 235

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
             +   F A   +AV+ FQ + GL   G+    TL A++V  
Sbjct: 236 --IDGIFGAGTTTAVREFQRKMGLTVDGVAGPQTLNALHVNP 275



 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+S  +V+ L+E+L   G  + S  ++  +      AV+ FQ  + L   G+    T
Sbjct: 127 LRFGSSGQAVRDLQEKLKAKGYYNHS--ITGQYGRITTEAVREFQRANRLTVDGIAGPQT 184

Query: 162 LEAM-NVPVDLRIRQ 175
           L A+ N        Q
Sbjct: 185 LAALTNQAPAASAPQ 199


>gi|219670845|ref|YP_002461280.1| spore cortex-lytic enzyme [Desulfitobacterium hafniense DCB-2]
 gi|219541105|gb|ACL22844.1| spore cortex-lytic enzyme [Desulfitobacterium hafniense DCB-2]
          Length = 228

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           IL+ G +  L  R L  G+    V  L+++L   G +     +   + +  ++AV  FQ 
Sbjct: 19  ILASGAYGALGDRALSQGSRGSEVTELQKKLASLGYVVG--KVDGVYGSKTKAAVTRFQK 76

Query: 148 RHGLDPSGMVDSSTLEAM 165
             GL   G+  + T++ +
Sbjct: 77  ERGLKVDGIAGAQTIKEL 94


>gi|56965585|ref|YP_177319.1| endopeptidase, cell wall lytic activity [Bacillus clausii KSM-K16]
 gi|56911831|dbj|BAD66358.1| cell wall lytic activity endopeptidase [Bacillus clausii KSM-K16]
          Length = 417

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 3/88 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L LG+ +  V  L+ +L   G  + +   +  +     SAV+ FQ  +GL   
Sbjct: 204 PASSTGSLRLGDRNSQVTDLQNQLRSLGYFNQNA--TGYYGEVTRSAVREFQKNNGLSAD 261

Query: 155 GMVDSSTLEAM-NVPVDLRIRQLQVNLM 181
           G+    T   + N P  +   Q   N  
Sbjct: 262 GIAGPQTFAKLSNSPAPVNKNQTVNNNQ 289



 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L +G+   SV  L+E L   G  + S   +  +      AV+ FQ  + L   
Sbjct: 118 PSSKTSLLRVGSRGGSVTALQEDLRKLGFFNQSP--TGYYGTVTRDAVRAFQRANNLQAD 175

Query: 155 GMVDSSTLEAM 165
           G+   +T  A+
Sbjct: 176 GIAGPATQAAL 186



 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  R L  G S   V  L+  L   G           F  +   AV  +Q  + L   G
Sbjct: 30  ALGDRTLRQGMSHPDVTELQNALKEKGFFTYGTATG-YFGTHTRDAVIAYQKANNLLVDG 88

Query: 156 MVDSSTLEAM 165
           +    TL ++
Sbjct: 89  VAGPQTLSSL 98


>gi|886316|gb|AAB53132.1| N-acetymuramyl-L-alanine amidase [Mycobacterium leprae]
          Length = 205

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 8/73 (10%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDL-DPSKGLSVA-------FDAYVESAVKLFQMRHGLD 152
            L  G+ + +V  +R  L   G L  P   L+ +       FD  ++ AV+ FQ   GL 
Sbjct: 11  TLRCGDRNAAVTEIRSALAALGLLHSPGDDLTTSKYIALDLFDPQLDDAVRAFQQHRGLL 70

Query: 153 PSGMVDSSTLEAM 165
             G+V  +T  A+
Sbjct: 71  VDGVVGEATHRAL 83



 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S   V  L+ RL   G       +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 104 SGDDVATLQARLQDLGFYTGM--VDGHFGLQTHNALISYQREYGLTADGICGPETLRSL 160


>gi|21106554|gb|AAM35357.1| lytic enzyme [Xanthomonas axonopodis pv. citri str. 306]
          Length = 589

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 12/122 (9%)

Query: 64  DSDIPIISKETI---AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           D++  + S E         +A A +    S  G        +  G+SS  V +L++ L  
Sbjct: 361 DANGKLTSPENFWNQGHQHQAGARHTQAASASG-----TGAVRHGDSSQDVGKLQQDLNR 415

Query: 121 SGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQL 176
            G  D           F      AV  FQ +HGL   G+V   T  A++  PV  R  Q+
Sbjct: 416 LGVRDAQGNRLAEDGRFGDNTREAVMAFQKQHGLQQDGVVGRDTRAALSAQPVQTREAQV 475

Query: 177 QV 178
             
Sbjct: 476 AA 477


>gi|77748527|ref|NP_640821.2| lytic enzyme [Xanthomonas axonopodis pv. citri str. 306]
          Length = 584

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 12/122 (9%)

Query: 64  DSDIPIISKETI---AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           D++  + S E         +A A +    S  G        +  G+SS  V +L++ L  
Sbjct: 356 DANGKLTSPENFWNQGHQHQAGARHTQAASASG-----TGAVRHGDSSQDVGKLQQDLNR 410

Query: 121 SGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQL 176
            G  D           F      AV  FQ +HGL   G+V   T  A++  PV  R  Q+
Sbjct: 411 LGVRDAQGNRLAEDGRFGDNTREAVMAFQKQHGLQQDGVVGRDTRAALSAQPVQTREAQV 470

Query: 177 QV 178
             
Sbjct: 471 AA 472


>gi|115377053|ref|ZP_01464270.1| penicillin-resistant DD-carboxypeptidase [Stigmatella aurantiaca
           DW4/3-1]
 gi|310820371|ref|YP_003952729.1| penicillin-resistant dd-carboxypeptidase-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115365961|gb|EAU64979.1| penicillin-resistant DD-carboxypeptidase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393443|gb|ADO70902.1| penicillin-resistant DD-carboxypeptidase-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 303

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 40/130 (30%), Gaps = 21/130 (16%)

Query: 46  SIVNDRFDNFLARVDMGIDSD-----IPIISKETIAQTEKAIAFYQDILSRGGWPELPIR 100
              + +F    A       S        I+  +T A+   A A           P  P  
Sbjct: 46  GAADGQFGPKTAAAVKAFQSAKGLVADGIVGPKTWAKLNSAAA-----------PSAPGG 94

Query: 101 P---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G S   V  L+ RL   G    +      F     +AVK FQ   GL   G+V
Sbjct: 95  SGPTLKQGQSGAPVTALQNRLNQLGF--NAGAADGQFGPKTTAAVKAFQHSKGLVADGVV 152

Query: 158 DSSTLEAMNV 167
              T   + +
Sbjct: 153 GPKTWNQLGI 162



 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 98  PIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P +P L LG+S  SV+ L++ L  +G    +      F     +AVK FQ   GL   G+
Sbjct: 17  PSQPTLKLGSSGASVKTLQQSLAKAGFSPGAADG--QFGPKTAAAVKAFQSAKGLVADGI 74

Query: 157 VDSSTLEAMN 166
           V   T   +N
Sbjct: 75  VGPKTWAKLN 84


>gi|148807399|gb|ABR13472.1| hypothetical protein [Pseudomonas aeruginosa]
          Length = 268

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ S  V++L+ RL        +      F A  E AV+ FQ  HGL   G+    
Sbjct: 2   TLRYGDRSQEVRQLQRRLNTW--AGANLYEDGHFGAATEDAVRAFQRSHGLVADGIAGPK 59

Query: 161 TLEAM 165
           TL A+
Sbjct: 60  TLSAL 64


>gi|323701941|ref|ZP_08113610.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533027|gb|EGB22897.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans
           DSM 574]
          Length = 314

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 23/158 (14%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
                  V+ L+  L + G       ++  +D   + AV+ FQ  H L   G+VD  T  
Sbjct: 48  PLMQGEDVKNLQLELQVLGYY--QGPINGIYDFLTQKAVQQFQADHRLKADGVVDEPTWY 105

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            M        RQ+++ + + + L     G   ++++     L  + +GK   +  +  G 
Sbjct: 106 QM-------ARQIELPVTKSETLPPPT-GQIALIIDTTKRKLTVMADGKPYKQFNIACGA 157

Query: 224 VDRQTPILHSRINRIMFNPYW-----------VIPRSI 250
            +  +P+   ++     N  W            +P  I
Sbjct: 158 PETPSPVGSWQVAHKAIN--WGDGFGTRWLGLNVPWGI 193



 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  ++  L   G       +   F   +E AVK F+  +GL     V+   
Sbjct: 251 LVQGDRGADVYEVQRTLKRLGYYKAE--VDGIFGYQMEQAVKKFRKANGLPMDNQVNEVM 308

Query: 162 LEAM 165
            +A+
Sbjct: 309 YQAL 312


>gi|296269327|ref|YP_003651959.1| peptidoglycan-binding domain 1 protein [Thermobispora bispora DSM
           43833]
 gi|296092114|gb|ADG88066.1| Peptidoglycan-binding domain 1 protein [Thermobispora bispora DSM
           43833]
          Length = 270

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 15/118 (12%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L LG    +V+ L+ RL   G       +   +    ++AV  FQ  HG+ PS  V
Sbjct: 58  PATTLRLGAKGAAVRALQARLKELGY--HPGKIDGRYGGATQAAVWAFQKVHGIKPSSTV 115

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
              T  A+  P   ++            L+ +    R + VN+    +   + G+  L
Sbjct: 116 GRRTWAALERPRAPKV------------LVPRGRPDR-IEVNLTQQIMVLYKKGRPVL 160


>gi|213422205|ref|ZP_03355271.1| hypothetical protein Salmonentericaenterica_32498 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 61

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 1   ALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 43


>gi|332799591|ref|YP_004461090.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1]
 gi|332697326|gb|AEE91783.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1]
          Length = 307

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 52/127 (40%), Gaps = 11/127 (8%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
                  V+ ++ +L   G  +    +S  +D     AVK FQ   GL+  G++ S TL+
Sbjct: 39  PPMYGHDVREIQTQLKNMGYYN--DPISGVYDNITSKAVKAFQQDMGLEVDGILGSRTLD 96

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            +         Q   +L       E+  G   +++      L  +++GK   +  V VG+
Sbjct: 97  KI----AELFEQPVAHLE-----PEKPKGEVSLVIFTLERQLIVLDDGKPFKQFPVAVGK 147

Query: 224 VDRQTPI 230
            +  TPI
Sbjct: 148 FNTPTPI 154



 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
              +  L  G+    V  +++RL   G  +        ++   + AV  FQ   GL PSG
Sbjct: 234 TFGLNTLSQGSRGSDVLEVQKRLAGYGFYNG--DYDGIYEHETQKAVLAFQKAKGLYPSG 291

Query: 156 MVDSSTLEAMNV 167
            VD++T + + +
Sbjct: 292 KVDAATYKELGI 303


>gi|254506022|ref|ZP_05118167.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus 16]
 gi|219551245|gb|EED28225.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus 16]
          Length = 301

 Score = 67.9 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 66/197 (33%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           V++N+    L   E +  +     V +GRV R TP + + I++   NP W  P SI +K+
Sbjct: 93  VVINLAELRLYYFEPDSGLVHIFPVGIGRVGRDTPEMSTTISQKRPNPTWTPPASI-RKE 151

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +A   + P  +                                    G  N +    + 
Sbjct: 152 YLAKGIELPAVV----------------------------------PAGPENPLGEYALR 177

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                  Y +H T +   F   +R  +SGC+R+    D+  WL        +  +     
Sbjct: 178 LAYGAGDYLIHGTNKD--FGIGLR-VSSGCIRME-PKDI-DWLFPKVSLGEKVRV----- 227

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 228 INEPIKVSLEPDRSVFI 244


>gi|90577710|ref|ZP_01233521.1| hypothetical protein VAS14_11704 [Vibrio angustum S14]
 gi|90440796|gb|EAS65976.1| hypothetical protein VAS14_11704 [Vibrio angustum S14]
          Length = 300

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 53/188 (28%)

Query: 189 QKMGLRYVLVNIPAASLEAV--ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             +  + ++VN+    L     ++        + +GRV R+TP + + IN  + NP W  
Sbjct: 87  PDVAHKGIVVNLAELRLYYFPKDDASKVYIFPIGIGRVGRETPSMTTSINEKVKNPTWTP 146

Query: 247 PRSI-----IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P SI      + D++  +                                          
Sbjct: 147 PASIRKEHAARGDILPAVV----------------------------------------P 166

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            G  N + + K+     +  Y +H T +   F   +R  + GC+R+ N  D+  WL    
Sbjct: 167 AGPDNPLGNYKMRLAYGHGEYLIHGTNKD--FGIGMR-VSGGCIRM-NPWDV-EWLFPHV 221

Query: 361 PTWSRYHI 368
              ++  I
Sbjct: 222 ALGTQVRI 229


>gi|17229182|ref|NP_485730.1| cell wall-binding protein [Nostoc sp. PCC 7120]
 gi|17135510|dbj|BAB78056.1| cell wall-binding protein [Nostoc sp. PCC 7120]
          Length = 424

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 6/78 (7%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   SV+ L+++L  +G       ++  +D   E AV+ FQ   GL   G+V +ST
Sbjct: 66  LERGDQGPSVRNLQQKLQQAGFY--QAPVTQVYDFSTEEAVRRFQAAAGLPVDGVVGAST 123

Query: 162 LEAMNV----PVDLRIRQ 175
           LE ++     PV  +++Q
Sbjct: 124 LEKLDQWRSSPVANQVQQ 141



 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+ L++RL ++G    +   +  F    E AVK FQ  + LD  G+V  +T
Sbjct: 216 LVKGDEGEAVRSLQQRLRVAGFYYGNA--TGVFGPITEEAVKRFQTAYRLDVDGIVGPAT 273

Query: 162 LEAM 165
           +  +
Sbjct: 274 IRRL 277



 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+   +V+ L+E+LI +G L      +  F  Y   AVK FQ  + L  SG+   +
Sbjct: 298 KLTVGDRGEAVRVLQEQLIQAGYLQGQP--NGYFGPYTAEAVKRFQAANYLAASGIAGPT 355

Query: 161 TLEAM 165
           T   +
Sbjct: 356 TRAKL 360


>gi|254514047|ref|ZP_05126108.1| general secretion pathway protein A [gamma proteobacterium NOR5-3]
 gi|219676290|gb|EED32655.1| general secretion pathway protein A [gamma proteobacterium NOR5-3]
          Length = 563

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 94  WPELP--IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P  +R L LG+S   V+R+ E L    D  P       FDA +E  VKLFQ + GL
Sbjct: 463 WRPSPGVLRTLQLGDSGEDVRRVAE-LFARLDRQPKPLTESLFDARLEQRVKLFQQQQGL 521

Query: 152 DPSGMVDSSTLEAMNVPVDL 171
              G++  +TL A+++ V  
Sbjct: 522 RADGVLGENTLRALSLSVGD 541


>gi|119493485|ref|ZP_01624152.1| Peptidoglycan-binding domain 1 protein [Lyngbya sp. PCC 8106]
 gi|119452668|gb|EAW33848.1| Peptidoglycan-binding domain 1 protein [Lyngbya sp. PCC 8106]
          Length = 612

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G    LP   L  G++  +V  L++RL   G  D    ++  FDA  E AV  FQ  + +
Sbjct: 212 GNPTPLPSGVLQQGDTGPAVGVLQQRLFRLGFYDGE--ITNYFDARTEQAVIRFQQAYRI 269

Query: 152 DPSGMVDSSTLEAM 165
            P+G V  +T+  +
Sbjct: 270 QPTGQVGPTTVSYL 283



 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 9/120 (7%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-------LHLG 105
           + F AR +  +         +   Q       Y    +  G P +P  P       L LG
Sbjct: 250 NYFDARTEQAVIRFQQAYRIQPTGQVGPTTVSYLISATGEGIPSIPTTPVANPSLPLRLG 309

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   SV  +++RL + G  + S  ++  FD     AV  FQ  +G+  +G+V ++T   +
Sbjct: 310 DRGTSVSLVQQRLRVLGYYNGS--VNGIFDLTTRRAVLAFQQDYGISQTGVVGATTQSYL 367



 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G+    V  +++ L   G  +    ++  +      AV  FQ  +GL   G+V 
Sbjct: 58  AQLITQGSRGAEVSAIQQSLQSLGFFN--ATVTGYYGPITRDAVIRFQQANGLSADGVVG 115

Query: 159 SSTLEAM 165
            +TL A+
Sbjct: 116 PNTLAAL 122



 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G++   V+++++RL           ++  FD   + AV  FQ  +G+  +G+V  +T  
Sbjct: 447 VGDTGFEVRKVQQRLRDLNYYRG--PINGFFDRTTQDAVVRFQRSNGITQTGVVGPTTRI 504

Query: 164 AM 165
            M
Sbjct: 505 YM 506



 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  L+ RL   G  + S   +  F +  ++AV  FQ  + +  +G+V   T
Sbjct: 142 LGQGDQGPGVTDLQTRLRQLGYFNTSP--TGFFGSITQNAVIRFQQANLIPATGLVSEET 199

Query: 162 LEAMN 166
           L  +N
Sbjct: 200 LVFLN 204


>gi|189423824|ref|YP_001951001.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter lovleyi SZ]
 gi|189420083|gb|ACD94481.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter lovleyi SZ]
          Length = 448

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 87/242 (35%), Gaps = 59/242 (24%)

Query: 162 LEAMNV---PVDLRIRQL-QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           L AMN       L+  QL + N  RI  +   +     +++NIP   L   + G +   +
Sbjct: 190 LAAMNGLSHKDALKAGQLLRYNNQRI--IPPHRTRDG-IVINIPDRMLYLFQQGSMAFST 246

Query: 218 TVIVGRVD------RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
            V +G          +TP+   +I     +P W +P SI Q++M                
Sbjct: 247 AVALGTPTKTDQFVWETPVGKFKIVNKAKDPTWTVPPSI-QEEM---------------- 289

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST--KIEFYSRNNTYMHDTPEP 329
                +GKEV +  +               PGK N +     K          +H T +P
Sbjct: 290 ---RLEGKEV-ITSI--------------PPGKDNPLGKYAMKTSLP---GILIHSTTKP 328

Query: 330 ILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
               ++  + + GC+RV    + +L   +  +T     Y   + +   +   V L   V 
Sbjct: 329 W---SIYTYASHGCIRVYPERMEELFKLVKPNTAGEIIYKPVK-LAVTEDGRVLLEAHVD 384

Query: 388 VH 389
           ++
Sbjct: 385 IY 386


>gi|118581595|ref|YP_902845.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
 gi|118504305|gb|ABL00788.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
          Length = 346

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 83/249 (33%), Gaps = 75/249 (30%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV------DRQTPILHSRINR 237
           +K++ ++M    +++NIP  +L   + GK+     V +G+       D  TP    R+  
Sbjct: 130 RKIIPRRMS-HGIVINIPDRTLYYFKEGKLTTSLPVALGQPQKGATYDWMTPTGKFRVVA 188

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
              +P W +PRSI                  + +    +  K V                
Sbjct: 189 KQTDPTWYVPRSI-----------------RSEMEARGKDVKTVVP-------------- 217

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
               PG  N +    I+        +H T  P    ++ RF + GC+RV    + D    
Sbjct: 218 ----PGPRNPLGKYAIKTSLP-GILIHSTTRPG---SIYRFASHGCIRVYPEQMKDFFNE 269

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII--QFRDDIYGLD 413
           +  +TP    Y            PVKLA               ++  +  +   D YG  
Sbjct: 270 VRVNTPGEIIYQ-----------PVKLA-------------VTEEGRVFLEVHHDAYGR- 304

Query: 414 NVHVGIIPL 422
            V +  +  
Sbjct: 305 GVELHALAR 313


>gi|291570839|dbj|BAI93111.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 225

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+SS  V  L+ +L   G        +  F      AVK FQ  +GL   G+   
Sbjct: 160 KSLSHGDSSSRVANLQHKLAYYGYFHARA--TGYFGPITTKAVKAFQRDYGLRVDGVAGP 217

Query: 160 STLEAMNV 167
           +TL A+ +
Sbjct: 218 ATLAALGM 225



 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            ++ G+S   V +L+  L   G        +  F +  + +VK FQ  +GL   G+V  +
Sbjct: 63  SIYYGSSGNHVVQLQNALANHGYF--RARSTGYFGSMTKHSVKAFQRDYGLAVDGIVGPA 120

Query: 161 TLEAM 165
           T  A+
Sbjct: 121 TASAL 125


>gi|15828462|ref|NP_302725.1| hydrolase [Mycobacterium leprae TN]
 gi|221230939|ref|YP_002504355.1| putative hydrolase [Mycobacterium leprae Br4923]
 gi|13093892|emb|CAC32236.1| putative hydrolase [Mycobacterium leprae]
 gi|219934046|emb|CAR72804.1| putative hydrolase [Mycobacterium leprae Br4923]
          Length = 406

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 8/73 (10%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDL-DPSKGLSVA-------FDAYVESAVKLFQMRHGLD 152
            L  G+ + +V  +R  L   G L  P   L+ +       FD  +E AV+ FQ   GL 
Sbjct: 11  TLRCGDRNAAVTEIRSALAALGLLHSPGDDLTTSKYIALDLFDPQLEHAVRAFQQHRGLL 70

Query: 153 PSGMVDSSTLEAM 165
             G+V  +T  A+
Sbjct: 71  VDGVVGEATHRAL 83



 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 21/166 (12%)

Query: 7   INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSD 66
            + +        +  +  +L    +  S  D++    Y ++  D FD  L          
Sbjct: 9   GDTLRCGDRNAAVTEIRSALAALGLLHSPGDDLTTSKYIAL--DLFDPQLEHAVRAFQQH 66

Query: 67  IPIISKETI-AQTEKAI--AFYQDILSRGGWPELPIRPL--HLGN--SSVSVQRLRERLI 119
             ++    +   T +A+  A Y+          L  R L    G   S   V  L+ RL 
Sbjct: 67  RGLLVDGVVGEATHRALKEASYR----------LGARTLYHRFGAPLSGDDVATLQARLQ 116

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             G       +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 117 DLGFYTGM--VDGHFGLQTHNALISYQREYGLTADGICGPETLRSL 160


>gi|261404540|ref|YP_003240781.1| peptidoglycan-binding domain 1 protein [Paenibacillus sp. Y412MC10]
 gi|261281003|gb|ACX62974.1| Peptidoglycan-binding domain 1 protein [Paenibacillus sp. Y412MC10]
          Length = 159

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           GWP      L  G+S   V+ L+  L  SG       +  +F A V SAVK FQ R GL 
Sbjct: 36  GWPT-----LRQGSSGGYVRALQSNLWASGYQSTVGSIDGSFGAGVTSAVKAFQSREGLT 90

Query: 153 PSGMVDSSTLEAMN 166
             G+V S +  AMN
Sbjct: 91  SDGVVGSGSWNAMN 104


>gi|254490906|ref|ZP_05104088.1| ErfK/YbiS/YcfS/YnhG family [Methylophaga thiooxidans DMS010]
 gi|224463815|gb|EEF80082.1| ErfK/YbiS/YcfS/YnhG family [Methylophaga thiooxydans DMS010]
          Length = 394

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 55/171 (32%), Gaps = 51/171 (29%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAV-----ENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           + +L        +++NI    L        ++ +  +   + +GR    TP+  +RI   
Sbjct: 91  RFILP-DAPREGIVINIAEMRLYYYPKTAKDSLQQVVTHPIGIGREGWATPLGKTRITNK 149

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
           + NP W  P SI +K+                                  +         
Sbjct: 150 VKNPTWTPPESI-RKE----------------------------------HLENGDPLPK 174

Query: 299 RQDPGKINAMASTKIE--FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
               G  N + + K+          Y +H T +P  F   +R  + GC+R+
Sbjct: 175 VVPAGPDNPLGAYKMNLSMPG----YLLHGTNKP--FGVGLR-VSHGCIRL 218


>gi|261822001|ref|YP_003260107.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
 gi|261606014|gb|ACX88500.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
          Length = 340

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 72/208 (34%), Gaps = 46/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     GK   +   + +G++ R TP++ + ++    NP W
Sbjct: 89  MLLPDTPREGIVVNLAELRLYYYPKGKNTVIVYPIGIGQLGRNTPLMTTSVSEKRENPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL++  I +                             G 
Sbjct: 149 T-PTANIRK----------HYLEEQGIKL-----------------------PAVVPAGP 174

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L  + P  
Sbjct: 175 DNPMGLHALRLSAHGGVYLLHGTNAD--FGIGMR-VSSGCIRL-RPDDI-KALFDNVPVG 229

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       I+  V+      V++   +
Sbjct: 230 TRVQILNDAIKTSVEPDGKRYVEVHQPL 257


>gi|258655499|ref|YP_003204655.1| cell wall hydrolase/autolysin [Nakamurella multipartita DSM 44233]
 gi|258558724|gb|ACV81666.1| cell wall hydrolase/autolysin [Nakamurella multipartita DSM 44233]
          Length = 383

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+   +V  LR+ L     L    G+   SV FD  V+ A++ FQ R GL   G+V 
Sbjct: 3   LRRGDRGPAVADLRDALASLQLLPSLNGVDRGSVEFDTTVDRAIRDFQQRRGLIADGIVG 62

Query: 159 SSTLEAM 165
             T  ++
Sbjct: 63  PVTARSL 69



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L    +   V  L+ RL   G    +      F    + +V+ FQ   GL   G+    
Sbjct: 84  TLSAPMTGDDVMALQTRLSEMGY--NTGRPDGIFGPLTDLSVRDFQRHRGLADDGVFGPQ 141

Query: 161 TLEAMNV 167
           T + +N 
Sbjct: 142 TYKELNR 148


>gi|125974461|ref|YP_001038371.1| peptidoglycan binding domain-containing protein [Clostridium
           thermocellum ATCC 27405]
 gi|256005183|ref|ZP_05430151.1| Peptidoglycan-binding domain 1 protein [Clostridium thermocellum
           DSM 2360]
 gi|281418988|ref|ZP_06250006.1| Peptidoglycan-binding domain 1 protein [Clostridium thermocellum
           JW20]
 gi|125714686|gb|ABN53178.1| Peptidoglycan-binding domain 1 [Clostridium thermocellum ATCC
           27405]
 gi|255990837|gb|EEU00951.1| Peptidoglycan-binding domain 1 protein [Clostridium thermocellum
           DSM 2360]
 gi|281407445|gb|EFB37705.1| Peptidoglycan-binding domain 1 protein [Clostridium thermocellum
           JW20]
 gi|316941598|gb|ADU75632.1| Peptidoglycan-binding domain 1 protein [Clostridium thermocellum
           DSM 1313]
          Length = 360

 Score = 67.2 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           I   +T++  ++ I       S GG        L  G S  SV  L++ L   G L  S 
Sbjct: 86  IAGPDTLSLIKRLINERTASRSSGG------TTLKEGMSGSSVTALQKDLKALGYL--SV 137

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             +  + +  + AVK  Q +HGL+  G+    TL 
Sbjct: 138 DPTGYYGSLTKEAVKKLQAKHGLEQDGIAGPKTLA 172



 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V  L+  L   G LD +   +  + +   +AVK  Q  +GL   G+    T
Sbjct: 34  LKEGMSGSQVTSLQRDLNTLGYLDVTP--TGYYGSLTTAAVKKLQRNYGLKEDGIAGPDT 91

Query: 162 LEAMNVPVDLR 172
           L  +   ++ R
Sbjct: 92  LSLIKRLINER 102


>gi|75910509|ref|YP_324805.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75704234|gb|ABA23910.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 305

 Score = 67.2 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 12/101 (11%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           S  P  +    AQ    I +     +  GWP      L +G  +  V +L++RL   G L
Sbjct: 208 SSTPRFAPTPSAQRISGIQY-----TSEGWPI-----LRVGMKNSEVTKLQQRLSQLGFL 257

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               G+   F    E A+K  Q R+G++P G+   +T EA+
Sbjct: 258 KG--GVDGYFGVQTEEALKAAQRRYGIEPDGVAGGATWEAL 296



 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           AIA  Q I  +     +    L +G+    V  L+  L + G    +  +   ++    +
Sbjct: 46  AIATPQQIAQQV---VINRPTLKIGSQGERVSELQAALRLLGFYSGA--IDGVYNENTAN 100

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAM 165
           AV  F+   GL P G+VD+ T + +
Sbjct: 101 AVSGFKQAAGLTPDGIVDAITWQRL 125


>gi|323491182|ref|ZP_08096368.1| general secretion pathway protein A [Vibrio brasiliensis LMG 20546]
 gi|323314550|gb|EGA67628.1| general secretion pathway protein A [Vibrio brasiliensis LMG 20546]
          Length = 540

 Score = 67.2 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 15/122 (12%)

Query: 49  NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAF-----YQDILSRGGWPELPIRPLH 103
             RF    A     +     +++ E I    + +       Y+ I     W       L 
Sbjct: 409 QPRFAVLYALSATKVQL---LVNDELIEFERQWLEEIWHGEYRHI-----WKGYWDETLK 460

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G     V  L + L     L  ++  S  FD  +++ V+LFQ   GL   G+    TL 
Sbjct: 461 PGMQGQQVALLDKHLSQL--LGQAESDSPMFDQQLKNKVELFQRWQGLSVDGIAGQKTLR 518

Query: 164 AM 165
            +
Sbjct: 519 LL 520


>gi|227329828|ref|ZP_03833852.1| hypothetical protein PcarcW_21820 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 340

 Score = 66.8 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 72/208 (34%), Gaps = 46/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     GK   +   + +G++ R TP++ + ++    NP W
Sbjct: 89  MLLPDTPREGIVVNLAELRLYYYPKGKNTVIVYPIGIGQLGRNTPLMTTSVSEKRENPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL++  I +                             G 
Sbjct: 149 T-PTANIRK----------HYLEEQGIKL-----------------------PAVVPAGP 174

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L  + P  
Sbjct: 175 DNPMGLHALRLSAHGGVYLLHGTNAD--FGIGMR-VSSGCIRL-RPDDI-KALFDNVPVG 229

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       I+  V+      V++   +
Sbjct: 230 TRVQIVNDAIKTSVEPDGKRYVEVHQPL 257


>gi|253688821|ref|YP_003018011.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755399|gb|ACT13475.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 340

 Score = 66.8 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 72/208 (34%), Gaps = 46/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     GK   +   + +G++ R TP++ + ++    NP W
Sbjct: 89  MLLPDTPREGIVVNLAELRLYYYPKGKNTVIVYPIGIGQLGRNTPLMTTSVSEKRENPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL++  I +                             G 
Sbjct: 149 T-PTANIRK----------HYLEEQGIKL-----------------------PAVVPAGP 174

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L  + P  
Sbjct: 175 DNPMGLHALRLSAHGGVYLLHGTNAD--FGIGMR-VSSGCIRL-RPDDI-KALFDNVPVG 229

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       I+  V+      V++   +
Sbjct: 230 TRVQILNDAIKTSVEPDGKRYVEVHQPL 257


>gi|50120795|ref|YP_049962.1| hypothetical protein ECA1865 [Pectobacterium atrosepticum SCRI1043]
 gi|49611321|emb|CAG74768.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 340

 Score = 66.8 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 72/208 (34%), Gaps = 46/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     GK   +   + +G++ R TP++ + ++    NP W
Sbjct: 89  MLLPDTPREGIVVNLAELRLYYYPKGKNTVIVYPIGIGQLGRNTPLMTTSVSEKRENPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL++  I +                             G 
Sbjct: 149 T-PTANIRK----------HYLEEQGIKL-----------------------PAVVPAGP 174

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L  + P  
Sbjct: 175 DNPMGLHALRLSAHGGVYLLHGTNAD--FGIGMR-VSSGCIRL-RPDDI-KALFDNVPVG 229

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       I+  V+      V++   +
Sbjct: 230 TRVQILNDAIKTSVEPDGKRYVEVHQPL 257


>gi|17230237|ref|NP_486785.1| hypothetical protein alr2745 [Nostoc sp. PCC 7120]
 gi|17131838|dbj|BAB74444.1| alr2745 [Nostoc sp. PCC 7120]
          Length = 305

 Score = 66.8 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 14/110 (12%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           S  P       AQ    I +     +  GWP      L +G  +  V +L++RL   G L
Sbjct: 208 SSTPRFGPTPSAQRISGIQY-----TSEGWPI-----LRVGMKNSEVTKLQQRLSQLGFL 257

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM--NVPVDLR 172
             S  +   F    E A+K  Q R+G++P G+   +T EA+        R
Sbjct: 258 KGS--VDGYFGVQTEEALKAAQRRYGIEPDGVAGGATWEALLRRSSPQRR 305



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           AIA  Q I  +     +    L +G+    V  L+  L + G    +  +   ++    +
Sbjct: 46  AIATPQQIAQQV---VINRPTLKIGSQGERVSELQAALRLLGFYSGA--IDGVYNENTAN 100

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAM 165
           AV  F+   GL P G+VD++T + +
Sbjct: 101 AVSGFKQAAGLTPDGIVDAATWQRL 125


>gi|212378958|gb|ACJ24812.1| matrix metalloproteinase [Pinus taeda]
          Length = 364

 Score = 66.8 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 6/111 (5%)

Query: 89  LSRGGWPELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           ++ G W     R L     G+    +  L+      G L     ++  FD  VESAV+ +
Sbjct: 48  VAAGAWEGF--RNLTNACKGDRMQGLPDLKRYFRRFGYLSAQNNVTEDFDEAVESAVRTY 105

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ-VNLMRIKKLLEQKMGLRY 195
           Q   GL+ +G++D +T+  + VP   R   +   + MR + L     G   
Sbjct: 106 QKNFGLNVTGVLDEATISQLMVPRCGREDIINGSSAMRGRGLFPFFPGSPR 156


>gi|186681476|ref|YP_001864672.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186463928|gb|ACC79729.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 379

 Score = 66.8 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   SV+ L+++L  +G       ++  +D   + AV+ FQ   GL   G+V +ST
Sbjct: 66  LEKGDQGPSVRNLQQKLKTAGFY--QASVTQVYDVSTQEAVRRFQKAVGLPVDGIVGAST 123

Query: 162 LEAM 165
           L+ +
Sbjct: 124 LQKL 127



 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+   SV+ ++E+LI +G L+     +  +  Y   AV+ FQ  + L  SG+   +
Sbjct: 255 KLRVGDRGESVRIIQEQLIQAGYLEGEP--NGYYGPYTADAVRRFQAANFLAASGVAGPT 312

Query: 161 TLEAM 165
           T   +
Sbjct: 313 TRAKL 317



 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L+ERL I+G    +   +  F    E +VK FQ  + L   G+   +T
Sbjct: 174 LAKGDEGEDVRALQERLRIAGFYYGNA--TGIFGPITEESVKRFQDSYKLSVDGIAGPAT 231

Query: 162 LEAM 165
           L  +
Sbjct: 232 LRKL 235


>gi|89073704|ref|ZP_01160218.1| hypothetical protein SKA34_11185 [Photobacterium sp. SKA34]
 gi|89050479|gb|EAR55971.1| hypothetical protein SKA34_11185 [Photobacterium sp. SKA34]
          Length = 300

 Score = 66.8 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 53/188 (28%)

Query: 189 QKMGLRYVLVNIPAASLEAV--ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             +  + ++VN+    L     ++        + +GRV R+TP + + IN+ + NP W  
Sbjct: 87  PDVAHKGIVVNLAELRLYFFPKDDASKVYIFPIGIGRVGRETPSMTTSINQKVKNPTWTP 146

Query: 247 PRSI-----IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P SI      + D++  + Q                                        
Sbjct: 147 PASIRKEHAAKGDILPAVVQ---------------------------------------- 166

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            G  N + + K+     +  Y +H T +   F   +R  + GC+R+ N  D+  WL    
Sbjct: 167 AGPDNPLGNYKMRLAYGHGEYLIHGTNKD--FGIGMR-VSGGCIRM-NPWDV-EWLFPHV 221

Query: 361 PTWSRYHI 368
              ++  I
Sbjct: 222 ALGTQVRI 229


>gi|297568445|ref|YP_003689789.1| Peptidoglycan-binding domain 1 protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924360|gb|ADH85170.1| Peptidoglycan-binding domain 1 protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 442

 Score = 66.4 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 33/89 (37%), Gaps = 14/89 (15%)

Query: 94  WPEL-PIRPLHLGNSSVSVQRLRERLIIS-----GDLDP--------SKGLSVAFDAYVE 139
           WP L P   L  G+    V++LR  L        G  +         +   +  FDA + 
Sbjct: 332 WPPLLPGELLQEGDQGPEVRQLRFLLQQLAAELSGHEEERAAATLAATASGADYFDAELA 391

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V  FQ  HGL+  G+V   T   +   
Sbjct: 392 ELVGNFQAAHGLEADGIVGPQTWRQLRRS 420


>gi|291566539|dbj|BAI88811.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 543

 Score = 66.4 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           +++  T+A  E        I++R    + P  P L  G+    V  L+ RL   G  +  
Sbjct: 39  LLTGVTVASAESLTNRETQIVARATPTQNPTSPVLRRGSRGQDVAELQIRLRELGYFNNP 98

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              +  F    + AV+ FQ   GL P G+V   T +A+
Sbjct: 99  NLGN--FGPITQQAVRQFQSDRGLRPDGIVGQETRQAL 134


>gi|284050956|ref|ZP_06381166.1| peptidoglycan binding domain-containing protein [Arthrospira
           platensis str. Paraca]
          Length = 247

 Score = 66.4 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+SS  V  L+ +L   G        +  F      +VK FQ  +GL   G+   
Sbjct: 182 KSLSHGDSSSRVANLQHKLAYYGYFHARA--TGYFGPITTKSVKAFQRDYGLKVDGVAGP 239

Query: 160 STLEAMNV 167
           +TL A+ +
Sbjct: 240 ATLAALGM 247



 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            ++ G+S   V +L+  L   G        +  F +  + +VK FQ  +GL   G+V  +
Sbjct: 85  SIYYGSSGNHVVQLQNALANHGYF--RARSTGYFGSMTKHSVKAFQRDYGLAVDGIVGPA 142

Query: 161 TLEAM 165
           T  A+
Sbjct: 143 TASAL 147


>gi|325290484|ref|YP_004266665.1| spore cortex-lytic enzyme [Syntrophobotulus glycolicus DSM 8271]
 gi|324965885|gb|ADY56664.1| spore cortex-lytic enzyme [Syntrophobotulus glycolicus DSM 8271]
          Length = 228

 Score = 66.4 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G+  L  R L  G+    V  L++RL + G +   +     F     +AV+LFQ  HGL 
Sbjct: 24  GYSALGDRTLSRGSRGPEVVDLQKRLSMLGYVTGPQDG--IFGRKTNAAVRLFQKEHGLT 81

Query: 153 PSGMVDSSTLEAM 165
             GM  ++T+  +
Sbjct: 82  VDGMAGTNTIREL 94


>gi|300934360|ref|ZP_07149616.1| putative hydrolase [Corynebacterium resistens DSM 45100]
          Length = 394

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 15/93 (16%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQMRH 149
           L +G+SS  V  +R  L   G L+  +G                FDA +  A+K FQ + 
Sbjct: 6   LQVGDSSPRVAEVRGTLARLGLLEGFEGDATGLSKQRWSAKDQVFDADLAEALKAFQQQR 65

Query: 150 GLDPSGMVDSSTLEAM---NVPVDLRIRQLQVN 179
           G+   GM+ S TL A+   +  +  R+  LQ N
Sbjct: 66  GIIADGMITSGTLRALREASYTLGARVLSLQSN 98



 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 15/98 (15%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN- 166
              V +L+ +L   G    +  +   F     +AV  +Q+ +GL+  G+V  +TL A++ 
Sbjct: 102 GDDVAQLQTQLHDLGFY--TNRIDGHFGHKTHAAVVSYQLNYGLNNDGVVGPNTLRALSY 159

Query: 167 -------VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
                          +      +I+    Q  G R V+
Sbjct: 160 LGRRITGGSPQSIREK-----EQIRSAGPQLSGKRVVI 192


>gi|319653745|ref|ZP_08007842.1| hypothetical protein HMPREF1013_04460 [Bacillus sp. 2_A_57_CT2]
 gi|317394588|gb|EFV75329.1| hypothetical protein HMPREF1013_04460 [Bacillus sp. 2_A_57_CT2]
          Length = 266

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ L  G+    V +++ +L  +G  +    L   +     SAVK FQ + GL   G+  
Sbjct: 96  LKVLRYGDIGKQVIQIQYQLKQTGHYES--NLDGIYGNGTVSAVKSFQKQQGLTADGIAG 153

Query: 159 SSTLEAMNVPVD 170
             T   ++    
Sbjct: 154 PRTRAELDRKAK 165



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  R L  G+S   V  L++ L+  G + P    +  + +    AVK FQ +  L   G
Sbjct: 28  ALGDRTLANGSSGSDVAELQDYLMTKG-VFPYHTSTGYYGSITVEAVKDFQRKRHLKVDG 86

Query: 156 MVDSSTLEAMNV 167
           +  S T  A+ V
Sbjct: 87  IAGSQTSHALKV 98


>gi|258591429|emb|CBE67730.1| General secretion pathway protein A [NC10 bacterium 'Dutch
           sediment']
          Length = 574

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 6/91 (6%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           PEL   P+  G     V+ LRER      +         FD  + + V  FQ    L   
Sbjct: 487 PELSSVPIRPGARGKDVEWLRERFAEFDGVPGGGRDRQVFDNDLRTRVIAFQRSRSLTAD 546

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           G+V   TL  +      R  ++     R+++
Sbjct: 547 GVVGKETLTHL--SAAQRDPKVP----RLRR 571


>gi|78046052|ref|YP_362227.1| putative lytic enzyme [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78034482|emb|CAJ22127.1| putative lytic enzyme [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 584

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGL 151
           P      L  G++S  V +L++ L   G  D           F      AV  FQ +HGL
Sbjct: 385 PASGTSALRHGDNSQDVGKLQQDLNRLGVRDAQGNRLAEDGRFGDNTREAVMAFQKQHGL 444

Query: 152 DPSGMVDSSTLEAM-NVPVDLRIRQLQ 177
              G+V   T  A+   P   R  Q+ 
Sbjct: 445 QQDGVVGRDTRAALAAQPAQTREAQVA 471


>gi|56963694|ref|YP_175425.1| peptidoglycan binding domain-containing protein [Bacillus clausii
           KSM-K16]
 gi|56909937|dbj|BAD64464.1| peptidoglycan-binding domain-containing protein [Bacillus clausii
           KSM-K16]
          Length = 355

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            P+H G  S  V++L++ L+ SG L+     S  +D+ V +AVK FQ  + L   G+   
Sbjct: 58  SPIHEGEKSERVEKLQDYLVESGYLEDQD-RSHTYDSKVVAAVKQFQQDNNLLVDGIAGV 116

Query: 160 STLEAMNVPVDLRIRQLQVNL 180
            TL +M V +      L VN+
Sbjct: 117 QTLGSMAV-LQEGSDGLLVNM 136



 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
           CFF   +L   L  V +   A     I        V    D  +    +           
Sbjct: 34  CFFFMSVLLFSLISVPEQADADTFSPIHEGEKSERVEKLQDYLVESGYLEDQDRSHTYDS 93

Query: 73  ETIAQTEKAIAFYQDILSRG--GWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           + +A  ++      ++L  G  G   L  +  L  G+  + V  L+++L           
Sbjct: 94  KVVAAVKQ-FQQDNNLLVDGIAGVQTLGSMAVLQEGSDGLLVNMLQKKLAQLQYY--QAD 150

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM----NVPVDLRIRQ 175
           +   +    ++AV  FQ ++GL   G+    T +A+      P + R ++
Sbjct: 151 IDGYYGVLTKAAVTAFQKQNGLAVDGIAGPLTFKALYYSEAEPAEQREKK 200


>gi|284034921|ref|YP_003384852.1| cell wall hydrolase/autolysin [Kribbella flavida DSM 17836]
 gi|283814214|gb|ADB36053.1| cell wall hydrolase/autolysin [Kribbella flavida DSM 17836]
          Length = 377

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R   +G+S  +V  +  +L   G L P       +D     AV+ FQ + GL   G+V 
Sbjct: 7   ARIYRIGDSGEAVAEIIGKLQRLGLLAPGPRS--VYDEETAHAVRGFQQQRGLMIDGIVG 64

Query: 159 SSTLEAM 165
             T  A+
Sbjct: 65  PQTYRAI 71



 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 33/98 (33%), Gaps = 13/98 (13%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSV----SVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           Y+ I     W  L  R L    S       V  L+ +L   G       +   F    + 
Sbjct: 68  YRAIDDA-RW-RLGDRLLTYVVSHPLTGDDVVALQAKLQELGF--AVARVDGIFGPDTQR 123

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
           AV  FQ   GL   G    ST +A+      RIR +  
Sbjct: 124 AVTEFQRNMGLPADGTCGPSTFKAL-----QRIRPMAT 156


>gi|169632015|ref|YP_001705664.1| N-acetylmuramoyl-L-alanine amidase CwlM [Mycobacterium abscessus
           ATCC 19977]
 gi|169243982|emb|CAM65010.1| N-acetylmuramoyl-L-alanine amidase CwlM [Mycobacterium abscessus]
          Length = 395

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL--------SVAFDAYVESAVKLFQMRHG 150
              +  G+   +V  +RE L   G L+    +           FDA ++ AV+ FQ   G
Sbjct: 5   ASNIRHGDRGPAVTEVREVLTALGFLEDPDEVLATGRHVMVDRFDATLDDAVRAFQQCRG 64

Query: 151 LDPSGMVDSSTLEAM 165
           L   G+V  +T   +
Sbjct: 65  LLVDGIVGPATYRTL 79



 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 16/132 (12%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDS-----DIPIISKETIAQTEKAIAFYQDILSR 91
           DE++    H ++ DRFD  L                 I+   T    ++A   Y+ + +R
Sbjct: 34  DEVLATGRH-VMVDRFDATLDDAVRAFQQCRGLLVDGIVGPATYRTLKEA--SYR-LGAR 89

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
             + +              V  L++RL   G        +  F     +++  +Q  +GL
Sbjct: 90  TLFHQFSAP-----MYGDDVATLQKRLQDLGFYTGLVDGN--FGLQTYNSLMSYQREYGL 142

Query: 152 DPSGMVDSSTLE 163
              G+    TL 
Sbjct: 143 TADGICGPETLR 154


>gi|261213072|ref|ZP_05927356.1| hypothetical protein VCJ_003350 [Vibrio sp. RC341]
 gi|260838137|gb|EEX64814.1| hypothetical protein VCJ_003350 [Vibrio sp. RC341]
          Length = 306

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 65/202 (32%), Gaps = 57/202 (28%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK- 253
           +++N+    L      +       V +GR+ R TP++ + I+    NP W  P SI ++ 
Sbjct: 95  IVINLAELRLYYFRPDEGKVYIFPVGIGRIGRDTPVMQTSISSKRKNPTWTPPESIRREH 154

Query: 254 ----DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
               D++  +                                           G  N + 
Sbjct: 155 KAKGDILPAVV----------------------------------------PAGPDNPLG 174

Query: 310 STKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              +     +  Y +H T +   F   +R  +SGC+R+ +  D+  WL +      +  I
Sbjct: 175 DYAMRLAYGSGEYLIHGTNKD--FGIGMR-VSSGCIRM-DPKDI-EWLFQQVERGEKVRI 229

Query: 369 EEVVKTRKTTPVKLATEVPVHF 390
                  +   V L  +  V  
Sbjct: 230 -----INEPIKVALEPDRSVFI 246


>gi|229491220|ref|ZP_04385048.1| peptidoglycan-binding domain 1 protein [Rhodococcus erythropolis
           SK121]
 gi|229321958|gb|EEN87751.1| peptidoglycan-binding domain 1 protein [Rhodococcus erythropolis
           SK121]
          Length = 396

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 14/78 (17%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK--------------GLSVAFDAYVESAVKLFQM 147
           L  G+   +V  +R  L   G L                       FD  ++SAV+ FQ 
Sbjct: 4   LRHGDHGPAVAEIRGTLTKLGYLHHGTSGIRRESADGAHWVAPDAIFDHQLDSAVRAFQQ 63

Query: 148 RHGLDPSGMVDSSTLEAM 165
           + GL   G+V  +T  ++
Sbjct: 64  QRGLLVDGIVGPATYRSL 81



 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 11/122 (9%)

Query: 45  HSIVNDRFDNFL-ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH 103
            +I + + D+ + A           I+   T     +A   Y+ + +R    +L   PL 
Sbjct: 47  DAIFDHQLDSAVRAFQQQRGLLVDGIVGPATYRSLREA--SYR-LGARTLIYQLSA-PL- 101

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G+    V  L+ +L   G    +  +   F      ++  FQ   G+   G+    TL 
Sbjct: 102 YGD---DVAALQAKLQDLGFY--AGRVDGFFGPQTHESLSSFQREIGIAADGICGPQTLR 156

Query: 164 AM 165
           ++
Sbjct: 157 SL 158


>gi|226309507|ref|YP_002769469.1| N-acetylmuramoyl-L-alanine amidase [Rhodococcus erythropolis PR4]
 gi|226188626|dbj|BAH36730.1| putative N-acetylmuramoyl-L-alanine amidase [Rhodococcus
           erythropolis PR4]
          Length = 396

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 14/78 (17%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK--------------GLSVAFDAYVESAVKLFQM 147
           L  G+   +V  +R  L   G L                       FD  ++SAV+ FQ 
Sbjct: 4   LRHGDHGPAVAEIRGTLTKLGYLHHGTSGIRRESADGAHWVAPDAIFDHQLDSAVRAFQQ 63

Query: 148 RHGLDPSGMVDSSTLEAM 165
           + GL   G+V  +T  ++
Sbjct: 64  QRGLLVDGIVGPATYRSL 81



 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 11/122 (9%)

Query: 45  HSIVNDRFDNFL-ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH 103
            +I + + D+ + A           I+   T     +A   Y+ + +R    +L   PL 
Sbjct: 47  DAIFDHQLDSAVRAFQQQRGLLVDGIVGPATYRSLREA--SYR-LGARTLIYQLSA-PL- 101

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G+    V  L+ +L   G    +  +   F      ++  FQ   G+   G+    TL 
Sbjct: 102 YGD---DVAALQAKLQDLGFY--AGRVDGFFGPQTHESLSSFQREIGIAADGICGPQTLR 156

Query: 164 AM 165
           ++
Sbjct: 157 SL 158


>gi|256398134|ref|YP_003119698.1| cell wall hydrolase/autolysin [Catenulispora acidiphila DSM 44928]
 gi|256364360|gb|ACU77857.1| cell wall hydrolase/autolysin [Catenulispora acidiphila DSM 44928]
          Length = 381

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               G+S  +V  +RERL   G +D           FD  VE+AV+ FQ        GMV
Sbjct: 6   TYRRGDSGPAVAAIRERLARLGLIDAGSIPAQGEPVFDDAVENAVRHFQQTRRTTVDGMV 65

Query: 158 DSSTLEAM 165
              T+  +
Sbjct: 66  TPGTMRLL 73



 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 22/143 (15%)

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIA-QTEKAIAFYQD--------ILSRGGWP 95
                      LAR+ +     IP   +       E A+  +Q         +++ G   
Sbjct: 12  SGPAVAAIRERLARLGLIDAGSIPAQGEPVFDDAVENAVRHFQQTRRTTVDGMVTPGTMR 71

Query: 96  ELPIRPLHLGNSS-----------VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
            L      LG+               V  L+  L+  G       ++ A+D     AV+ 
Sbjct: 72  LLEEASWRLGDRDLVPSPAEPPFGDDVAELQRSLLTLGF--DCGRVNGAYDPTTVGAVRE 129

Query: 145 FQMRHGLDPSGMVDSSTLEAMNV 167
           FQ   GL  +G+ D +T++A+N 
Sbjct: 130 FQRNVGLPATGVTDLATVQALNR 152


>gi|119511408|ref|ZP_01630520.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
 gi|119463953|gb|EAW44878.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
          Length = 267

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG  +  V++L+ RL   G L         F    E+AVK  Q R+GL+  G+V  +T
Sbjct: 203 LRLGMRNSEVRKLQARLKQLGFLAGDVDGD--FGMNTEAAVKAAQQRYGLEADGVVGGAT 260

Query: 162 LEAM 165
            EA+
Sbjct: 261 WEAL 264



 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           AI   Q I        +    L  G+    V  L+  L + G    +  +   +     S
Sbjct: 47  AIVAPQRIAQATPTASISRPTLRFGSQGERVLELQAALKLLGFYSGA--VDGVYREETAS 104

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAM 165
           AV LF+    L+P G+VD+ T E +
Sbjct: 105 AVSLFKRAVALNPDGIVDAMTWERL 129


>gi|284053689|ref|ZP_06383899.1| Peptidoglycan-binding domain 1 protein [Arthrospira platensis str.
           Paraca]
          Length = 130

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           +++  T+A  E        I++R    + P  P L  G+    V  L+ RL   G  +  
Sbjct: 11  LLTGVTVASAESLTNRETQIVARATPTQNPTSPVLRRGSRGQDVAELQIRLRELGYFNNP 70

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              +  F    + AV+ FQ   GL P G+V   T +A+
Sbjct: 71  NLGN--FGPITQQAVRQFQSDRGLRPDGIVGQETRQAL 106


>gi|284989789|ref|YP_003408343.1| peptidoglycan-binding domain 1 protein [Geodermatophilus obscurus
           DSM 43160]
 gi|284063034|gb|ADB73972.1| Peptidoglycan-binding domain 1 protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 234

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V   + RL+ +  LD    +   F    E A + FQ  HGL   G+V   T
Sbjct: 167 LRRGDRGAAVATWQWRLVQA--LDRQVDVDEVFGPMTEQATRDFQSAHGLAVDGVVGPRT 224

Query: 162 LEAM 165
             AM
Sbjct: 225 RAAM 228


>gi|160935923|ref|ZP_02083297.1| hypothetical protein CLOBOL_00816 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441165|gb|EDP18882.1| hypothetical protein CLOBOL_00816 [Clostridium bolteae ATCC
           BAA-613]
          Length = 533

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     ++RL++RL+  G +D +   +  F    + AVK FQ ++ L   G+V + T
Sbjct: 81  LRIGVRHEIIKRLQQRLMDLGFMD-NDEPTDYFGEMTQQAVKHFQRQNELPTDGIVGNVT 139

Query: 162 LEAMNVPVDLR 172
            +A+ +  D +
Sbjct: 140 WDAI-MSPDAK 149



 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V   +ERL   G L  +     A+      AVK FQ R+     G +  ST
Sbjct: 226 LSYGEKSDVVLACQERLKELGYLTTTPDG--AYGEDTVVAVKQFQARNDQVVDGYLGPST 283

Query: 162 LEAMNVPVDLRIRQLQV 178
             A+N   D R   L +
Sbjct: 284 RIALN-SPDARANGLML 299



 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 13/101 (12%)

Query: 78  TEKAIAFYQD--------ILSRGGW-----PELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           T++A+  +Q         I+    W     P+     +  G     ++R+++RL   G L
Sbjct: 116 TQQAVKHFQRQNELPTDGIVGNVTWDAIMSPDAKYYAVSKGTQGDDIERIQQRLYELGYL 175

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +  ++  F    E+AV   Q  +GL+  G V   T+  +
Sbjct: 176 ATADLVTGNFGDSTEAAVLKLQEVNGLEQDGKVGQRTINLL 216



 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+     L LG    +V ++++ L   G L     ++  +    E+AV+ FQ R+GL   
Sbjct: 290 PDARANGLMLGERGDAVTKVQQLLNKHGYLVSGN-VTGYYGEATENAVRNFQSRNGLTSD 348

Query: 155 GMVDSSTLEAMNVPVDLR 172
           G+V   T+  +      R
Sbjct: 349 GLVGVQTMAKLTGDNVRR 366


>gi|115380132|ref|ZP_01467166.1| hypothetical protein STIAU_0960 [Stigmatella aurantiaca DW4/3-1]
 gi|310822017|ref|YP_003954375.1| hypothetical protein STAUR_4769 [Stigmatella aurantiaca DW4/3-1]
 gi|115362855|gb|EAU62056.1| hypothetical protein STIAU_0960 [Stigmatella aurantiaca DW4/3-1]
 gi|309395089|gb|ADO72548.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 529

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L  G+    V+ L+ RL   G +L    G    F    E+AVK FQ +H L+  G+V   
Sbjct: 235 LKEGSKGTEVKTLQGRLEKLGFELGQQDG---VFGPKTEAAVKRFQSKHNLEADGIVGPK 291

Query: 161 TLEAMNVPVDLRIRQ 175
           T +A+   +  R  Q
Sbjct: 292 THQAIEKALSARTEQ 306



 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 38/108 (35%), Gaps = 19/108 (17%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPI--------RPLHLGNSSVSVQRLRERLII 120
            I K   A+TE+A        S   W + P           L  G    SV+ L++ L +
Sbjct: 295 AIEKALSARTEQAKRQSDAFESGSKWKDAPALADVKSGKEHLQQGMEGGSVKHLQKLLGV 354

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGL---DPSGMVDSSTLEAM 165
             D          F      AV  FQ  H L   D +G V   TL AM
Sbjct: 355 ETD--------GKFGPNTRKAVAEFQREHRLDVGDAAGSVGPKTLAAM 394


>gi|84385389|ref|ZP_00988421.1| uncharacterized protein conserved in bacteria [Vibrio splendidus
           12B01]
 gi|84379986|gb|EAP96837.1| uncharacterized protein conserved in bacteria [Vibrio splendidus
           12B01]
          Length = 353

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 43/187 (22%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L      + +++N+    L   E  K       V +GRV R TP + ++I++   NP
Sbjct: 134 RLILP-DTPRKGIVINLAELRLYYFEPEKNQVHVFPVGIGRVGRDTPEMITKISQKRPNP 192

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI +K+ +    + P+ +                                    
Sbjct: 193 TWTPPNSI-RKEYLEKGIELPRVV----------------------------------PA 217

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           G  N +    +        Y +H T +   F   +R  +SGC+R+    D+  WL +   
Sbjct: 218 GPENPLGEYALRLAYGAGDYLIHGTNKD--FGIGLR-VSSGCIRME-PKDI-EWLFEQVS 272

Query: 362 TWSRYHI 368
              +  I
Sbjct: 273 RGEQVTI 279


>gi|332982629|ref|YP_004464070.1| spore cortex-lytic enzyme [Mahella australiensis 50-1 BON]
 gi|332700307|gb|AEE97248.1| spore cortex-lytic enzyme [Mahella australiensis 50-1 BON]
          Length = 235

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L+ G     V  ++ +L   G  D     S  +     +AV+ FQ ++GL   G+V 
Sbjct: 34  TGNLYYGAKGDKVAEVQRKLKQWGYYDGPVDAS--YGPKTFAAVQQFQRKNGLKVDGVVG 91

Query: 159 SSTLEAMNVPVDL 171
            +T  AM V ++ 
Sbjct: 92  PATAAAMGVTLNT 104


>gi|148974051|ref|ZP_01811584.1| hypothetical protein VSWAT3_13027 [Vibrionales bacterium SWAT-3]
 gi|145965748|gb|EDK30996.1| hypothetical protein VSWAT3_13027 [Vibrionales bacterium SWAT-3]
          Length = 319

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 56/207 (27%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L      + +++N+    L   E  K       V +GR+ R TP + ++I++   NP
Sbjct: 100 RLILP-DTPRKGIVINLAELRLYYFEPEKNQVHVFPVGIGRIGRDTPEMITKISQKRPNP 158

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P+SI +++ +    + P+ +                                    
Sbjct: 159 TWTPPKSI-REEYLEKGIELPKVV----------------------------------PA 183

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           G  N +    +        Y +H T +   F   +R  +SGC+R+              P
Sbjct: 184 GPENPLGEYALRLAYGAGDYLIHGTNKD--FGIGLR-VSSGCIRME-------------P 227

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPV 388
               +  E+V +  + T +     + V
Sbjct: 228 KDIEWLFEQVSRGEQVTFIN--EPIKV 252


>gi|225024391|ref|ZP_03713583.1| hypothetical protein EIKCOROL_01266 [Eikenella corrodens ATCC
           23834]
 gi|224942888|gb|EEG24097.1| hypothetical protein EIKCOROL_01266 [Eikenella corrodens ATCC
           23834]
          Length = 310

 Score = 66.0 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 59/163 (36%), Gaps = 41/163 (25%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NIP   L   ENG++     V VG+   +TP+ +  I    +NP W IP SI ++
Sbjct: 33  QHVVINIPQMRLFLYENGQLKNVYPVAVGKNRTRTPLGNYHIGSKAYNPTWSIPASIRRE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
              A L +                     +  +               PG  N +    +
Sbjct: 93  RAAAGLPE---------------------ISSI--------------PPGPSNPLGPVFV 117

Query: 314 EF-YSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLD 353
                R    +H T  P    +V    + GCVR+   N +   
Sbjct: 118 RLGPPRLGLGIHGTNAP---ASVPGIRSHGCVRMHSNNALQFA 157


>gi|108805098|ref|YP_645035.1| cell wall hydrolase/autolysin [Rubrobacter xylanophilus DSM 9941]
 gi|108766341|gb|ABG05223.1| cell wall hydrolase/autolysin [Rubrobacter xylanophilus DSM 9941]
          Length = 358

 Score = 65.6 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 30/67 (44%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R L  G+    V  L+ RL   G    ++G+   F    E AV+ FQ R G+   G+V 
Sbjct: 1   MRTLRRGDRGREVVDLQTRLQALGYDLGNRGIDGVFREETELAVRAFQQRVGILADGLVG 60

Query: 159 SSTLEAM 165
             T   +
Sbjct: 61  PVTWREL 67



 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 12/84 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W EL       G               V  ++  L   G       ++  FD     AV+
Sbjct: 64  WRELVEAGYRPGGRLLYLRQPPFRGADVMEMQRMLNDLGF--DPGAVNGLFDGRTARAVR 121

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ   GL P G+VD +  + +++
Sbjct: 122 DFQKNAGLQPDGVVDGAVFKTLSI 145


>gi|302388464|ref|YP_003824286.1| Peptidoglycan-binding domain 1 protein [Clostridium saccharolyticum
           WM1]
 gi|302199092|gb|ADL06663.1| Peptidoglycan-binding domain 1 protein [Clostridium saccharolyticum
           WM1]
          Length = 510

 Score = 65.6 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V  L+ERL+  G +D  +     F    E+AVK +Q ++GL   G+V   T
Sbjct: 86  LRNGVEHPVVASLQERLMDLGFMDNDEPTH-YFGNVTEAAVKTYQRQNGLVQDGIVGPET 144

Query: 162 LEAMNVPVDLR 172
           L ++ +    +
Sbjct: 145 LNSI-MSPSAK 154



 Score = 60.2 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 14/97 (14%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           I+  ET+       A Y  +                G     + R++ RL   G L  + 
Sbjct: 139 IVGPETLNSIMSPSAKYYAVSK--------------GVEGEDISRIQSRLYELGYLASAG 184

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +S +F    E+AVK  Q  +GL+  G V   T+  +
Sbjct: 185 QVSGSFGDETEAAVKKLQEVNGLNIDGKVGRQTINLL 221



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG    SV R+++ L   G L  S  ++  +    E AVK FQ  +GL   G V   T
Sbjct: 302 LTLGEQGDSVTRIQQLLNKYGYL-ASSNVTGYYGEVTEKAVKAFQSNNGLTADGSVGQLT 360

Query: 162 LEAM 165
           +  +
Sbjct: 361 MGKL 364



 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V   ++RL   G L  +     A+     +AVK FQ R+ L   G +  ST
Sbjct: 231 LAYGEKSDVVLTSQQRLKELGYLITAPDG--AYGDDTVTAVKQFQSRNDLVVDGYLGPST 288

Query: 162 L 162
            
Sbjct: 289 R 289


>gi|154497714|ref|ZP_02036092.1| hypothetical protein BACCAP_01690 [Bacteroides capillosus ATCC
           29799]
 gi|150273212|gb|EDN00357.1| hypothetical protein BACCAP_01690 [Bacteroides capillosus ATCC
           29799]
          Length = 224

 Score = 65.6 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
              G++  +V+ ++ +L   G    +  +   +    E AVK FQ ++GL   G+   +T
Sbjct: 33  YRQGSTGDAVRTIQTKLSNWGYFSGA--IDGIYGPKTEEAVKYFQRKNGLTADGVAGPAT 90

Query: 162 LEAMNVP 168
           L A+ + 
Sbjct: 91  LRALGMS 97


>gi|83643225|ref|YP_431660.1| hypothetical protein HCH_00323 [Hahella chejuensis KCTC 2396]
 gi|83631268|gb|ABC27235.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 315

 Score = 65.6 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 40/168 (23%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPILHSRINRIMFNP 242
           + +L   +    +L+N+    L   +  K  L +  + +G VD  TPI+ ++I   M NP
Sbjct: 88  RFILPPGL-RNGILINLAEYRLYYFQPDKKRLYTVPIGIGTVDFPTPIMDTKIVTRMKNP 146

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI Q+ +                   DE G+++                     
Sbjct: 147 TWYPPESIRQRQL-------------------DEYGEQLPRAV---------------PA 172

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
           G  N + +   +    ++  +H T    +    +R  + GC+R+ N  
Sbjct: 173 GPDNPLGAYAFKL-DADSYLIHGT-NKGV-GIGMR-VSHGCIRLYNWD 216


>gi|288554208|ref|YP_003426143.1| endopeptidase, cell wall lytic activity [Bacillus pseudofirmus OF4]
 gi|288545368|gb|ADC49251.1| endopeptidase, cell wall lytic activity [Bacillus pseudofirmus OF4]
          Length = 393

 Score = 65.6 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L +G +   V  L+E L   G     +     + +    AV+ FQ  +GL   G
Sbjct: 25  ALGDQTLRVGMNHTDVTELQEALKSKGYFTFDRATG-YYGSITADAVRKFQASNGLKVDG 83

Query: 156 MVDSSTLEAM 165
           +    T  A+
Sbjct: 84  IAGPQTFAAL 93



 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V RL++RL   G  +     +  +      +V+ FQ  + L   G+    T
Sbjct: 191 LRQGTRSAEVTRLQDRLRQLGYFNS--NSTGYYGTVTTESVRRFQAVNKLQVDGVAGPQT 248

Query: 162 LEAM 165
           L  +
Sbjct: 249 LSRL 252



 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 42/122 (34%), Gaps = 10/122 (8%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH 103
           Y SI  D    F A   + +D    I   +T A  +   +      S           L 
Sbjct: 62  YGSITADAVRKFQASNGLKVDG---IAGPQTFAALKANGSTVTAASSNT-----SSATLR 113

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G    +V  L+++L   G    +  +   F    E AV+ FQ   GL   G+    T  
Sbjct: 114 TGARGAAVTNLQQQLRNHGHFSSA--VDGVFGPLTERAVRSFQSARGLSVDGIAGPQTFS 171

Query: 164 AM 165
           A+
Sbjct: 172 AL 173


>gi|326204425|ref|ZP_08194283.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
 gi|325985457|gb|EGD46295.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
          Length = 508

 Score = 65.6 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             +P+   +LG+ +  + + ++RL   G L  +   S  +D     AVK FQ  +GL   
Sbjct: 203 KAVPM-SFYLGDENKEILQYKQRLYELGYL--TAKPSGKYDNDTVQAVKRFQENNGLIAD 259

Query: 155 GMVDSSTLEAM 165
           G +   T + +
Sbjct: 260 GFIGPVTKDLL 270



 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            + LG     VQ+L+ERL   G +  + G    F    + AVK FQ R+GL   G V   
Sbjct: 138 TVSLGAEGTDVQQLQERLYELGYMGKATG---YFGTDTDIAVKDFQKRNGLFDDGNVGKQ 194

Query: 161 TLEAM 165
           T E +
Sbjct: 195 TREVL 199



 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+S   V +++  L   G L   K ++  F +   +AV  FQ ++GL   G + S T
Sbjct: 280 LDIGDSGDDVTKVQTYLKKLGYL---KSVTGYFGSDTHNAVLKFQSKNGLGKDGKIGSQT 336

Query: 162 LEAMNVPVDLR 172
           +  + +  D +
Sbjct: 337 IAKL-LSPDAK 346


>gi|254416303|ref|ZP_05030057.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196176985|gb|EDX71995.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 320

 Score = 65.6 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+    V  +++RL   G  D     +  F      AV+ FQ   GL P G+V 
Sbjct: 59  AQTLQPGSRGSQVIEIQQRLRELGYFDQQP--TGYFGPITTEAVQQFQRSQGLIPDGIVG 116

Query: 159 SSTLEAM 165
             T   +
Sbjct: 117 QRTQSVL 123



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V  L+ +L  +G  DP + +   +    ++AV+ FQ  + L P G+ + 
Sbjct: 182 RELRPGDRGQEVFELQLKLRQAGF-DPGR-VDGIYGFQTQNAVEQFQEANNLFPDGVANQ 239

Query: 160 STLEAM 165
            TL+A+
Sbjct: 240 DTLQAL 245


>gi|254228730|ref|ZP_04922153.1| ErfK/YbiS/YcfS/YnhG family [Vibrio sp. Ex25]
 gi|262396548|ref|YP_003288401.1| hypothetical protein VEA_001253 [Vibrio sp. Ex25]
 gi|151938677|gb|EDN57512.1| ErfK/YbiS/YcfS/YnhG family [Vibrio sp. Ex25]
 gi|262340142|gb|ACY53936.1| hypothetical protein VEA_001253 [Vibrio sp. Ex25]
          Length = 308

 Score = 65.6 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 47/204 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +  + +++N+    L     G+ +     V +GR+ R TP++ +RI++   NP W  P
Sbjct: 97  PDVPHKGIVINLAELRLYYFPKGEDIVHVFPVGIGRIGRDTPVMTTRISQKRPNPTWTPP 156

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + +  A     P  +                                    G  N 
Sbjct: 157 ASI-RAEYKAKGIDLPTVV----------------------------------PAGPDNP 181

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           +    +     N  Y +H T +   F   +R  ++GC+R+ +  D+  WL +        
Sbjct: 182 LGMFALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPSDI-EWLFEKVRNGEEV 236

Query: 367 HIEEVVKTRKTTPVKLATEVPVHF 390
           +I       +   V L  +  V  
Sbjct: 237 NI-----INQPVKVSLEPDRSVFL 255


>gi|20808596|ref|NP_623767.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis
           MB4]
 gi|254479061|ref|ZP_05092416.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|20517226|gb|AAM25371.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis
           MB4]
 gi|214035017|gb|EEB75736.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 324

 Score = 65.6 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L LG+    V  L+ RL   G       +   F    E+AVK +Q   GL P+
Sbjct: 172 PPVEYPTLRLGDRGPFVVNLQARLKSLGF--DPGPIDGIFGPKTEAAVKAYQQSRGLPPT 229

Query: 155 GMVDSSTLEAM 165
           G+VD +T  A+
Sbjct: 230 GIVDETTWNAL 240


>gi|121534863|ref|ZP_01666682.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
 gi|121306462|gb|EAX47385.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
          Length = 211

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 14/151 (9%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L    +  G S   V  L+  L I G  +    +   FDA   +A+  FQ   GL  +G
Sbjct: 11  RLDTTRIGEGASGPLVAELQHILAIRGHYNGE--IHGRFDAETRAALARFQEEQGLPVTG 68

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK----MGLRYVLVNIPAASLEAVENG 211
            +   T   +         ++ V+          +    +   ++L+      L   E+ 
Sbjct: 69  ELTPLTFCRL-----QAAEKISVD---PAPQPPARGKSSLSRPHILITKAKRQLTLFESN 120

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
               +  V +G+    TP+ +  I   + NP
Sbjct: 121 TPFRQWPVAIGKPHTPTPVGNFAIAAKIMNP 151


>gi|300866800|ref|ZP_07111480.1| Peptidoglycan-binding domain 1 (fragment) [Oscillatoria sp. PCC
           6506]
 gi|300335209|emb|CBN56640.1| Peptidoglycan-binding domain 1 (fragment) [Oscillatoria sp. PCC
           6506]
          Length = 491

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+    V  L++ L   G        +  +DA   +AV+ FQ   GL   G+ 
Sbjct: 51  PALALRRGDRGPEVVELQKNLQTRGYYAGE--TTGFYDAATRAAVRKFQQEKGLRVDGIA 108

Query: 158 DSSTLEAM 165
              TL  +
Sbjct: 109 GRRTLSKL 116


>gi|319949441|ref|ZP_08023502.1| N-acetylmuramoyl-L-alanine amidase cwlM [Dietzia cinnamea P4]
 gi|319436903|gb|EFV91962.1| N-acetylmuramoyl-L-alanine amidase cwlM [Dietzia cinnamea P4]
          Length = 396

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 14/77 (18%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKG--------------LSVAFDAYVESAVKLFQMR 148
             G+    V  +R  L   G L                       FDA +E+AV  FQ  
Sbjct: 4   RRGDRGPEVAAIRATLAGMGLLHNIDSVGVTEPETGSVLARTDAVFDADLETAVLAFQQA 63

Query: 149 HGLDPSGMVDSSTLEAM 165
            GL   G+V  +T  A+
Sbjct: 64  RGLISDGIVGPATQAAL 80



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 7/123 (5%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETI-AQTEKAIAFYQDILSRGGWPELPIRPLHL 104
           +  +  FD  L    +       +IS   +   T+ A+     +L       +  +P   
Sbjct: 43  ARTDAVFDADLETAVLAFQQARGLISDGIVGPATQAALDDASHVLGTRDLSYIVSKP--- 99

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
             +   V +L+ RL   G    +  +   F A   +AV  FQ    L+  G+V + TL+ 
Sbjct: 100 -MAGDDVAQLQRRLGELGFY--AGLVDGTFGALTHAAVTDFQRDCALEADGVVGAETLDT 156

Query: 165 MNV 167
           +N 
Sbjct: 157 INR 159


>gi|332711428|ref|ZP_08431360.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332349977|gb|EGJ29585.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 269

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            LPI  L  G    +VQ+L+ RL   G L     +   F    ++AV+  Q +  L+P G
Sbjct: 202 TLPI--LRQGMRGPAVQQLQRRLKSLGFLK--ATVDGVFGEVTKAAVQAAQRKFKLEPDG 257

Query: 156 MVDSSTLEAM 165
           +V  +T  A+
Sbjct: 258 IVGPATWNAL 267



 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+    V  L+  L + G       ++  +      AV   Q   GL P G++ ++
Sbjct: 53  TLDIGSEGERVSELQAVLKLLGYYTGE--VNGFYGDNTAIAVSKLQREAGLTPHGIMGAA 110


>gi|304386762|ref|ZP_07369030.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis ATCC
           13091]
 gi|304339162|gb|EFM05248.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis ATCC
           13091]
          Length = 365

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 74/233 (31%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 107 ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 127

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+ +  +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDIASL 212


>gi|325202722|gb|ADY98176.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M01-240149]
 gi|325208718|gb|ADZ04170.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           NZ-05/33]
          Length = 358

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 74/233 (31%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 107 ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 127

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+ +  +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDIASL 212


>gi|325128783|gb|EGC51645.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis N1568]
          Length = 344

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 74/233 (31%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 33  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 93  ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 113

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 114 RLGDPKLGLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 156

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+ +  +
Sbjct: 157 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDIASL 198


>gi|317131428|ref|YP_004090742.1| spore cortex-lytic enzyme [Ethanoligenens harbinense YUAN-3]
 gi|315469407|gb|ADU26011.1| spore cortex-lytic enzyme [Ethanoligenens harbinense YUAN-3]
          Length = 231

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG++   V++++ RL   G    +  +   + A   +AV  FQ ++GL   G+  S+TL
Sbjct: 41  RLGSTGSEVRQIQTRLKSWGYYTGT--VDGVYGAGTRAAVIAFQRKNGLTADGVAGSATL 98

Query: 163 EAMNVPV 169
            A+ +P 
Sbjct: 99  RAIGLPA 105


>gi|15676382|ref|NP_273518.1| hypothetical protein NMB0471 [Neisseria meningitidis MC58]
 gi|7225699|gb|AAF40908.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|316984751|gb|EFV63710.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|325140891|gb|EGC63400.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis CU385]
 gi|325199656|gb|ADY95111.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis H44/76]
          Length = 358

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 74/233 (31%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 107 ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 127

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+ +  +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDIASL 212


>gi|121635388|ref|YP_975633.1| hypothetical protein NMC1677 [Neisseria meningitidis FAM18]
 gi|161870603|ref|YP_001599775.1| hypothetical protein NMCC_1671 [Neisseria meningitidis 053442]
 gi|218768765|ref|YP_002343277.1| hypothetical protein NMA2014 [Neisseria meningitidis Z2491]
 gi|254805501|ref|YP_003083722.1| hypothetical protein NMO_1571 [Neisseria meningitidis alpha14]
 gi|120867094|emb|CAM10860.1| hypothetical protein NMC1677 [Neisseria meningitidis FAM18]
 gi|121052773|emb|CAM09119.1| hypothetical protein NMA2014 [Neisseria meningitidis Z2491]
 gi|161596156|gb|ABX73816.1| conserved hypothetical protein [Neisseria meningitidis 053442]
 gi|254669043|emb|CBA07504.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
 gi|254670599|emb|CBA06543.1| hypothetical protein NME_1166 [Neisseria meningitidis alpha153]
 gi|254672572|emb|CBA06223.1| hypothetical protein NMW_0790 [Neisseria meningitidis alpha275]
 gi|261391984|emb|CAX49448.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
           8013]
 gi|308388672|gb|ADO30992.1| hypothetical protein NMBB_0524 [Neisseria meningitidis alpha710]
 gi|319411005|emb|CBY91403.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
           WUE 2594]
 gi|325130769|gb|EGC53504.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           OX99.30304]
 gi|325134836|gb|EGC57472.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis M13399]
 gi|325136857|gb|EGC59455.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis M0579]
 gi|325138839|gb|EGC61390.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis ES14902]
 gi|325142905|gb|EGC65267.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           961-5945]
 gi|325198847|gb|ADY94303.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis G2136]
 gi|325203575|gb|ADY99028.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M01-240355]
 gi|325205535|gb|ADZ00988.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M04-240196]
          Length = 358

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 74/233 (31%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 107 ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 127

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+ +  +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDIASL 212


>gi|290967813|ref|ZP_06559366.1| 3D domain protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290782172|gb|EFD94747.1| 3D domain protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 170

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           + +G S  +VQRL+  LI +G L  S G    F A    AV  FQ   GLD  G+V + T
Sbjct: 1   MEMGMSGAAVQRLQYMLIDAGYL--SDGADGVFGAATRDAVTRFQAAKGLDADGVVGTRT 58

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKL 186
           L A+      +      N+   +++
Sbjct: 59  LTALAETGKKKTNNSAQNIWGKRRM 83


>gi|260774029|ref|ZP_05882944.1| hypothetical protein VIB_002508 [Vibrio metschnikovii CIP 69.14]
 gi|260610990|gb|EEX36194.1| hypothetical protein VIB_002508 [Vibrio metschnikovii CIP 69.14]
          Length = 306

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 71/197 (36%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+    L     N +      V +GR+ R TP + ++I+++  NP W  P+S ++ +
Sbjct: 96  IVVNLAELRLYYFPPNTQQVHIFPVGIGRIGRDTPEMTTQISQMRRNPTWTPPQS-VRNE 154

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +    + P  +                                    G  N M +  + 
Sbjct: 155 YLQRGIELPAVV----------------------------------PAGPDNPMGNYAMR 180

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL        +  I +   
Sbjct: 181 LAYGSGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPKDI-EWLFHQVDRGVKVRIID--- 232

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V+ 
Sbjct: 233 --EPIKVTLEPDRSVYL 247


>gi|167584280|ref|ZP_02376668.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           ubonensis Bu]
          Length = 268

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++   LG+    V  L+ RLI +G    +  ++  +D   ESAVK  Q   GL   G+  
Sbjct: 1   MKTHRLGDQGDDVGLLQRRLIRAGY---ALDVTHVYDEATESAVKAVQTEAGLVVDGIAG 57

Query: 159 SSTLEAM 165
             TL A+
Sbjct: 58  PKTLAAI 64


>gi|317492238|ref|ZP_07950667.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919577|gb|EFV40907.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 333

 Score = 65.2 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 66/208 (31%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+   +   + +G++ R TP + + +++ + NP W
Sbjct: 90  MLLPDAPREGIVINLAEMRLFYYPKGEGKVVVYPIGIGQLGRNTPEMVTSVSQSIANPTW 149

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
               +I                   +                     E          G 
Sbjct: 150 TPTANI-----------------RKHYK------------------AEGVTLPAVVPAGP 174

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   ++   Y +H T     F   +R  +SGC+R+    D+   L K  P  
Sbjct: 175 ENPMGLFALRLSAQGGVYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-EALFKTVPKG 229

Query: 364 SRYHIEEV-----VKTRKTTPVKLATEV 386
           +R  I        V+      V++   +
Sbjct: 230 TRVQIVNAPVKVSVEPDGKRYVEVHQPL 257


>gi|290475508|ref|YP_003468396.1| LysM domain-containing protein [Xenorhabdus bovienii SS-2004]
 gi|289174829|emb|CBJ81630.1| putative enzyme with LysM domain [Xenorhabdus bovienii SS-2004]
          Length = 356

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 75/210 (35%), Gaps = 48/210 (22%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + LL   +  + +++N+    L     GK   +   + +G+++R TP + + +++++ NP
Sbjct: 92  QMLLPDTL-RQGIIINLAEFRLYYFPKGKNYVVVYPIGIGQLERDTPTMTTSVSQLIKNP 150

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P + I+KD                I +                             
Sbjct: 151 TWT-PTTNIRKDY-----------ASRGIIL-----------------------PTVVPA 175

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           G  N M    +   +    Y +H T     F   +R  +SGC+R+    D++  L    P
Sbjct: 176 GADNPMGDFALRLAAGRGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDIEN-LFYSVP 230

Query: 362 TWSR-----YHIEEVVKTRKTTPVKLATEV 386
             +R       I+  V+      V++   +
Sbjct: 231 RGTRVQVINEPIKYTVEPTGKRYVEIHQPL 260


>gi|218508835|ref|ZP_03506713.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli Brasil 5]
          Length = 62

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/45 (62%), Positives = 35/45 (77%)

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +V+ T   TP+KLATEVPV++VYISAW   D I+QFRDDIY +D 
Sbjct: 1   QVIATGVNTPIKLATEVPVYYVYISAWGMPDGIVQFRDDIYQMDG 45


>gi|304313095|ref|YP_003812693.1| General secretion pathway protein-related protein, ATPase [gamma
           proteobacterium HdN1]
 gi|301798828|emb|CBL47061.1| General secretion pathway protein-related protein, ATPase [gamma
           proteobacterium HdN1]
          Length = 632

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 9/90 (10%)

Query: 94  WPELPIR---PLHLGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQ 146
           W ++P     PL  G  S  V  LR  L    DLD      +     +D  +   VK FQ
Sbjct: 541 W-QVPASYRAPLMPGVISPLVPWLRNGLSQL-DLDVSEVAGQASGSLYDPALVERVKAFQ 598

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
            + G    G+V   TL  +   +D  + +L
Sbjct: 599 RKQGEPADGIVGEMTLILLTRELDAHLPKL 628


>gi|111020641|ref|YP_703613.1| N-acetylmuramoyl-L-alanine amidase [Rhodococcus jostii RHA1]
 gi|110820171|gb|ABG95455.1| probable N-acetylmuramoyl-L-alanine amidase [Rhodococcus jostii
           RHA1]
          Length = 399

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 14/78 (17%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLS--------------VAFDAYVESAVKLFQM 147
           L  G+   +V  +R  L   G L      +                FD +++SAV+ FQ 
Sbjct: 4   LRHGDHGPAVAEIRGTLAGLGFLHNGVADTRREGTNGSHWIAPDAVFDHHLDSAVRAFQQ 63

Query: 148 RHGLDPSGMVDSSTLEAM 165
           + GL   G+V  +T  +M
Sbjct: 64  QRGLLVDGIVGPATYRSM 81



 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 10/97 (10%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           I+   T    ++A   Y+ + +R    +L   PL  G+    V  L+ RL   G      
Sbjct: 72  IVGPATYRSMKEA--SYR-LGARTLIYQLSA-PL-YGD---DVATLQTRLQDLGFYVG-- 121

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   F      ++  FQ   G+   G+   +TL ++
Sbjct: 122 RVDGFFGPQTHDSLSSFQREIGIAADGICGPATLRSL 158


>gi|312794953|ref|YP_004027875.1| hypothetical protein RBRH_00889 [Burkholderia rhizoxinica HKI 454]
 gi|312166728|emb|CBW73731.1| Hypothetical protein RBRH_00889 [Burkholderia rhizoxinica HKI 454]
          Length = 268

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           + PL LG+    V RL+ RLI +G       ++  +DA  E+AV   Q+  GL   G+  
Sbjct: 1   MNPLRLGDHGYEVGRLQRRLIRAGYRPQ---VTHRYDAATEAAVTALQIHTGLVVDGIAG 57

Query: 159 SSTLEAMN 166
             TL A+N
Sbjct: 58  PQTLIALN 65


>gi|167770795|ref|ZP_02442848.1| hypothetical protein ANACOL_02146 [Anaerotruncus colihominis DSM
           17241]
 gi|167666835|gb|EDS10965.1| hypothetical protein ANACOL_02146 [Anaerotruncus colihominis DSM
           17241]
          Length = 286

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 20/143 (13%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+    V+++++RL   G       +   F    + AV  FQ ++GL   G+  ++TL
Sbjct: 95  KTGSRGNEVRQIQQRLKNWGYYTGE--VDGIFGVETKKAVMSFQRKNGLTVDGIAGNATL 152

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           +AM +    +                       +L NI +A       G+      V VG
Sbjct: 153 KAMGIQSSQQTG----------GSGGYSSSDIALLANIISAEAR----GEP-FEGQVAVG 197

Query: 223 RV--DR-QTPILHSRINRIMFNP 242
            V  +R + P     ++ +++ P
Sbjct: 198 AVVLNRVEHPSFPDTLSGVVYQP 220


>gi|219668958|ref|YP_002459393.1| peptidoglycan-binding protein [Desulfitobacterium hafniense DCB-2]
 gi|219539218|gb|ACL20957.1| Peptidoglycan-binding domain 1 protein [Desulfitobacterium
           hafniense DCB-2]
          Length = 391

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   SV +L++ L   G    +      F    E+AV  FQ   GL P G+V   
Sbjct: 243 TLRQGSRGPSVVQLQQLLTARGFNPGAADG--IFGPRTEAAVIAFQRSSGLTPDGIVGIR 300

Query: 161 TLEAMNVP 168
           T  A+ V 
Sbjct: 301 TWTALGVT 308



 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G +  SV +L++ L   G    +  +   F    E+AV  FQ   GL   G+V
Sbjct: 160 PCPTLRQGATGPSVVQLQQLLTSHGFSPGA--IDGIFGPRTEAAVIAFQGSRGLVQDGIV 217

Query: 158 DSSTLEAMNV 167
              T  A+ V
Sbjct: 218 GVRTWTALGV 227



 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+   SV+ L+  L   G       +   F +  ++AV  FQ   GL   G+V   
Sbjct: 322 TLRMGSRGASVKELQSLLKAQGFSPG--NIDGIFGSRTQAAVIAFQKSRGLVQDGIVGIR 379

Query: 161 TLEAMNV 167
           T  A+ V
Sbjct: 380 TWTALGV 386



 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+   SV  L++ L   G    +  +   F     +AV  FQ   GL   G+V
Sbjct: 84  PCPVLRQGSQGPSVVHLQQLLTSHGFSPGA--IDGIFGPRTHAAVVAFQGSRGLVQDGVV 141

Query: 158 DSSTLEAMNV 167
              T  A+ V
Sbjct: 142 GVKTWTALGV 151


>gi|89894526|ref|YP_518013.1| hypothetical protein DSY1780 [Desulfitobacterium hafniense Y51]
 gi|89333974|dbj|BAE83569.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 404

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   SV +L++ L   G    +      F    E+AV  FQ   GL P G+V   
Sbjct: 256 TLRQGSRGPSVVQLQQLLTARGFNPGAADG--IFGPRTEAAVIAFQRSSGLTPDGIVGIR 313

Query: 161 TLEAMNVP 168
           T  A+ V 
Sbjct: 314 TWTALGVT 321



 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G +  SV +L++ L   G    +  +   F    E+AV  FQ   GL   G+V
Sbjct: 168 PCPTLRQGATGPSVVQLQQLLTSHGFSPGA--IDGIFGPRTEAAVIAFQGSRGLVQDGIV 225

Query: 158 DSSTLEAMNV 167
              T  A+ V
Sbjct: 226 GVRTWTALGV 235



 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+   SV+ L+  L   G       +   F +  ++AV  FQ   GL   G+V   
Sbjct: 335 TLRMGSRGASVKELQSLLKAQGFSPG--NIDGIFGSRTQAAVIAFQKSRGLVQDGIVGIR 392

Query: 161 TLEAMNV 167
           T  A+ V
Sbjct: 393 TWTALGV 399



 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+   SV  L++ L   G    +  +   F     +AV  FQ   GL   G+V
Sbjct: 92  PCPVLRQGSQGPSVVHLQQLLTSHGFSPGA--IDGIFGPRTHAAVVAFQGSRGLVQDGVV 149

Query: 158 DSSTLEAMNV 167
              T  A+ V
Sbjct: 150 GVKTWTALGV 159


>gi|331002315|ref|ZP_08325833.1| hypothetical protein HMPREF0491_00695 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410131|gb|EGG89565.1| hypothetical protein HMPREF0491_00695 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 539

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L LG+ +  V+RL+  L  +G L+ S      F    E+A+K FQ  +GL   G   
Sbjct: 317 ANGLRLGDQNEQVERLQSLLAKAGYLNDSNATG-YFGEITETALKRFQSNNGLSADGRAG 375

Query: 159 SSTLEAMN 166
           + T   +N
Sbjct: 376 AQTFAKLN 383



 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           E+    L LG  S  VQ ++ RL   G L  S   +   D  +  AV++FQ ++ L   G
Sbjct: 243 EIKANTLSLGEHSEVVQAIQNRLSELGYLTTSPDGTYGNDTEL--AVRVFQSKNDLVVDG 300

Query: 156 MVDSSTLEAMNVPVDLRIRQLQV-----NLMRIKKLLEQ 189
            +  ST   + +  + +   L++      + R++ LL +
Sbjct: 301 YLGPSTRAVI-LSSEAKANGLRLGDQNEQVERLQSLLAK 338



 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     + +++ERL+  G ++  +  +  F     SAV +FQ ++GL   G++  ST
Sbjct: 104 LEEGVQHSYIAKVQERLMELGFMEHDEPTN-YFGNVTRSAVMIFQRQNGLAQDGIIGPST 162

Query: 162 L 162
           L
Sbjct: 163 L 163



 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG+    V+R++ R+   G L  +  ++  +D   +      Q  + L   G V S T+
Sbjct: 177 KLGDVGEDVKRIQTRMYELGYLASADLITGTYDEKTQEGALKLQQINSLSEDGKVGSETM 236

Query: 163 EAM 165
             +
Sbjct: 237 NLL 239


>gi|325145008|gb|EGC67291.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M01-240013]
          Length = 358

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 73/233 (31%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 107 ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 127

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 212


>gi|221214643|ref|ZP_03587613.1| putative peptidoglycan binding domain protein [Burkholderia
           multivorans CGD1]
 gi|221165533|gb|EED98009.1| putative peptidoglycan binding domain protein [Burkholderia
           multivorans CGD1]
          Length = 266

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG+    V  L+ +LI +G           + +    AV  FQ  HGL   G+   
Sbjct: 3   KTLRLGDRGADVAYLQRQLIAAG---ARIDADALYGSATRGAVVAFQASHGLVADGIAGP 59

Query: 160 STLEAM 165
            T  A+
Sbjct: 60  KTWAAL 65


>gi|315651948|ref|ZP_07904950.1| endopeptidase [Eubacterium saburreum DSM 3986]
 gi|315485777|gb|EFU76157.1| endopeptidase [Eubacterium saburreum DSM 3986]
          Length = 533

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L LG+ +  V RL+  L  +G L+ +      F    ESA+K FQ  +GL+  G   
Sbjct: 316 ANGLVLGDQNEQVSRLQALLAKAGYLNEANATG-YFGEITESALKRFQSNNGLEADGRAG 374

Query: 159 SSTLEAMNV 167
           + T   +N 
Sbjct: 375 AQTFAKLNT 383



 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           E+    L LG  S  VQ ++ RL   G L  S   +   D  +  AV+ FQ ++ L   G
Sbjct: 242 EIKANTLSLGEHSEVVQAIQNRLFQLGYLTSSPDGTYGNDTEL--AVRTFQSKNDLVVDG 299

Query: 156 MVDSSTLEAMNVPVDLRIRQLQV 178
            +  ST   + +  + +   L +
Sbjct: 300 YLGPSTRAVI-LSKEAKANGLVL 321



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G     + R++ RL+  G +D +   +  F    ++AV +FQ ++GL   G++  STL
Sbjct: 106 GVQHSYIARVQSRLMELGFMD-NDEPTNYFGEVTKAAVMIFQRQNGLAQDGIIGPSTL 162



 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG+    V+R++ RL   G L  +  ++  +D   + A    Q  + L   G V S T+
Sbjct: 176 KLGDVGEDVKRIQNRLYELGYLASADMITGTYDERTQEAALKLQQINQLSEDGKVGSETM 235

Query: 163 EAM 165
             +
Sbjct: 236 NLL 238


>gi|218675980|ref|YP_002394799.1| hypothetical protein VS_II0198 [Vibrio splendidus LGP32]
 gi|218324248|emb|CAV25529.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 300

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 43/187 (22%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L      + +++N+    L   E  K       V +GRV R TP + ++I++   NP
Sbjct: 81  RLILP-DTPRKGIVINLAELRLYFFEPEKNQVHVFPVGIGRVGRDTPEMITKISQKRPNP 139

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI +K+ +    + P+ +                                    
Sbjct: 140 TWTPPNSI-RKEYLEKGIELPKVV----------------------------------PA 164

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           G  N +    +        Y +H T +   F   +R  +SGC+R+    D+  WL +   
Sbjct: 165 GPENPLGEYALRLAYGAGDYLIHGTNKD--FGIGLR-VSSGCIRME-PKDI-EWLFEQVS 219

Query: 362 TWSRYHI 368
              +  I
Sbjct: 220 RGEQVTI 226


>gi|209524094|ref|ZP_03272645.1| 40-residue YVTN family beta-propeller repeat protein [Arthrospira
           maxima CS-328]
 gi|209495469|gb|EDZ95773.1| 40-residue YVTN family beta-propeller repeat protein [Arthrospira
           maxima CS-328]
          Length = 510

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 6/107 (5%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLDP 126
           +++  T+A  E  I     I++R   P     P  L  G+    V  L+ RL   G  + 
Sbjct: 11  LLTGVTVASAESPINRETQIVARAT-PTQNQTPRVLRRGSRGQEVAELQIRLRELGYFNN 69

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLR 172
               +  F    + AV+ FQ   GL P G+V   T +A+  +P   +
Sbjct: 70  PNLGN--FGPITQQAVRQFQSDRGLRPDGIVGQETRQALALIPPSPK 114


>gi|86144591|ref|ZP_01062923.1| uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
 gi|85837490|gb|EAQ55602.1| uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
          Length = 296

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 43/187 (22%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L      + +++N+    L   E  K       V +GRV R TP + ++I++   NP
Sbjct: 77  RLILP-DTPRKGIVINLAELRLYFFEPEKNQVHVFPVGIGRVGRDTPEMITKISQKRPNP 135

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI +K+ +    + P+ +                                    
Sbjct: 136 TWTPPNSI-RKEYLEKGIELPKVV----------------------------------PA 160

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           G  N +    +        Y +H T +   F   +R  +SGC+R+    D+  WL +   
Sbjct: 161 GPENPLGEYALRLAYGAGDYLIHGTNKD--FGIGLR-VSSGCIRME-PKDI-EWLFEQVS 215

Query: 362 TWSRYHI 368
              +  I
Sbjct: 216 RGEQVTI 222


>gi|294627225|ref|ZP_06705812.1| lytic enzyme [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|294667703|ref|ZP_06732915.1| lytic enzyme [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|292598464|gb|EFF42614.1| lytic enzyme [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292602543|gb|EFF45982.1| lytic enzyme [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 244

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+ S  V +L++ L   G  D           F      AV  FQ +HGL   G+V 
Sbjct: 111 LRHGDDSQDVGKLQQDLNRLGVRDAQGNRLAEDGRFGDNTREAVTAFQKQHGLQQDGVVG 170

Query: 159 SSTLEAMN-VPVDLRIRQLQV 178
             T  A++  PV +R  Q+  
Sbjct: 171 RDTRAALSAQPVQIREAQVAA 191


>gi|161521380|ref|YP_001584807.1| peptidoglycan binding domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189352453|ref|YP_001948080.1| putative bacteriophage-encoded peptidoglycan-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|327198031|ref|YP_004306400.1| gp33 [Burkholderia phage KS5]
 gi|160345430|gb|ABX18515.1| Peptidoglycan-binding domain 1 protein [Burkholderia multivorans
           ATCC 17616]
 gi|189336475|dbj|BAG45544.1| putative bacteriophage-encoded peptidoglycan-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|310657165|gb|ADP02280.1| gp33 [Burkholderia phage KS5]
          Length = 266

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + LHLG+    V  L+ +L+ +G           + +    AV  FQ  HGL   G+   
Sbjct: 3   KTLHLGDRGADVAYLQRQLVAAG---ARIDADAIYGSATRGAVVAFQASHGLVADGIAGP 59

Query: 160 STLEAM 165
            T  A+
Sbjct: 60  KTWAAL 65


>gi|238926949|ref|ZP_04658709.1| NLP/P60 protein [Selenomonas flueggei ATCC 43531]
 gi|238885183|gb|EEQ48821.1| NLP/P60 protein [Selenomonas flueggei ATCC 43531]
          Length = 226

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
                 +G+    V  ++ +L   G    + G    F      AVK FQ  HGLD  G+V
Sbjct: 28  SAESFQIGDQGTDVAEIQGQLSNYGYDVAADGD---FGPATAEAVKEFQAAHGLDADGLV 84

Query: 158 DSSTLEAM 165
             +T EA+
Sbjct: 85  GPATYEAL 92


>gi|167630552|ref|YP_001681051.1| erfk/ybis/ycfs/ynhg [Heliobacterium modesticaldum Ice1]
 gi|167593292|gb|ABZ85040.1| erfk/ybis/ycfs/ynhg [Heliobacterium modesticaldum Ice1]
          Length = 307

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 21/161 (13%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           P         V  L+ERL   G       L   +D     AV   Q + GL   G V SS
Sbjct: 30  PAAPPLKGSDVAELQERLKELGYYSG--PLDGLYDRKTVDAVTQMQRQKGLKADGCVSSS 87

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T   + +   +   Q        +K     +G+  ++V +   +L  + +G V     V 
Sbjct: 88  T--WLALSPPVMTNQPA----EPRKPPSAPVGVITLVVELDKNTLSVLIDGNVYKTYPVA 141

Query: 221 VGRVDRQTPILHSRINRIMFNPYW-----------VIPRSI 250
            G+ D  +P+       +    +W            +P  I
Sbjct: 142 TGKRDTPSPV--GEWRIVDKQKHWGDGFGSRWLGFNVPWGI 180



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +L      +G +   V R++ RL   G           F A +E AV+ FQ +  +  +G
Sbjct: 230 KLSKSAYKIGMTGQEVARIQFRLQEKGFSPGLADG--RFGAEMEKAVRNFQKQQQISETG 287

Query: 156 MVDSSTLEAMNVPVDLR 172
           ++D +TL  ++  V+ +
Sbjct: 288 VIDEATLRLLDFQVEKK 304


>gi|209524911|ref|ZP_03273456.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209494560|gb|EDZ94870.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 225

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+S   V  L+ +L   G        +  F      AVK FQ  +GL   G+   
Sbjct: 160 KSLSHGDSCSRVTNLQHKLAYYGYFHARA--TGYFGPITTKAVKAFQRDYGLRVDGVAGP 217

Query: 160 STLEAMNV 167
           +TL A+ +
Sbjct: 218 ATLAALGM 225



 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            ++ G+S   V +L+  L   G        +  F +  + +VK FQ  +GL   G+V  +
Sbjct: 63  SIYYGSSGNHVVQLQNALANHGYF--RARSTGYFGSITKHSVKAFQRDYGLVADGIVGPA 120

Query: 161 TLEAM 165
           T  A+
Sbjct: 121 TASAL 125


>gi|295394855|ref|ZP_06805068.1| N-acetylmuramoyl-L-alanine amidase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972188|gb|EFG48050.1| N-acetylmuramoyl-L-alanine amidase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 378

 Score = 64.5 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           + +  +H G+S   V  ++ +L   G        S  FD   ES ++ FQ   G+   G+
Sbjct: 1   MTVSSIHPGDSDPLVATVKAQLHRLGY--QCDPSSDLFDHQFESVIREFQQSRGIVVDGV 58

Query: 157 VDSSTLEAM 165
           + + T + +
Sbjct: 59  IGAETFKEL 67



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 21/130 (16%)

Query: 42  ESYHSIVNDRFD----NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ--DILSRGGWP 95
           +    + + +F+     F     + +D    +I  ET  + E  IA Y+  D + R    
Sbjct: 30  DPSSDLFDHQFESVIREFQQSRGIVVDG---VIGAETFKELE--IARYKLGDRVLRFD-- 82

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
             P+RPL        V  L+ RL   G    S  ++  F +   +AV+  Q   GL P G
Sbjct: 83  --PVRPLQ----GDDVTELQHRLSRLGVYTES--ITFEFGSATHNAVREIQNELGLSPDG 134

Query: 156 MVDSSTLEAM 165
           +V  STL A+
Sbjct: 135 VVGPSTLAAL 144


>gi|302556105|ref|ZP_07308447.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302473723|gb|EFL36816.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 83

 Score = 64.5 bits (156), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GM 156
              L  G +   V  L++RL+   D+      S ++D  + +AV  FQ+ +G+     G+
Sbjct: 6   AGTLREGATGPEVTELQQRLLRIPDVYRDGATSGSYDPTLTAAVARFQLWYGIRGDETGV 65

Query: 157 VDSSTLEAM 165
             + T  A+
Sbjct: 66  YGNDTRAAL 74


>gi|226362884|ref|YP_002780664.1| N-acetylmuramoyl-L-alanine amidase [Rhodococcus opacus B4]
 gi|226241371|dbj|BAH51719.1| putative N-acetylmuramoyl-L-alanine amidase [Rhodococcus opacus B4]
          Length = 399

 Score = 64.1 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 14/78 (17%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK--------------GLSVAFDAYVESAVKLFQM 147
           L  G+   +V  +R  L   G L                       FD +++SAV+ FQ 
Sbjct: 4   LRHGDHGPAVAEIRGTLAGLGFLHNGVPGTRRESINGSHWIAPDAVFDHHLDSAVRAFQQ 63

Query: 148 RHGLDPSGMVDSSTLEAM 165
           + GL   G+V  +T  +M
Sbjct: 64  QRGLLVDGIVGPATYRSM 81



 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           I+   T    ++A   Y+ + +R    +L   PL  G+    V  L+ RL   G      
Sbjct: 72  IVGPATYRSMKEA--SYR-LGARTLIYQLSA-PL-YGD---DVATLQTRLQDLGFYVG-- 121

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   F     +++  FQ   G+   G+   +TL ++
Sbjct: 122 RVDGFFGPQTHNSLSSFQREIGIAADGICGPATLRSL 158


>gi|59801822|ref|YP_208534.1| hypothetical protein NGO1484 [Neisseria gonorrhoeae FA 1090]
 gi|194099286|ref|YP_002002380.1| hypothetical protein NGK_1755 [Neisseria gonorrhoeae NCCP11945]
 gi|239999553|ref|ZP_04719477.1| hypothetical protein Ngon3_08731 [Neisseria gonorrhoeae 35/02]
 gi|240014729|ref|ZP_04721642.1| hypothetical protein NgonD_08818 [Neisseria gonorrhoeae DGI18]
 gi|240017177|ref|ZP_04723717.1| hypothetical protein NgonFA_08426 [Neisseria gonorrhoeae FA6140]
 gi|240081184|ref|ZP_04725727.1| hypothetical protein NgonF_07718 [Neisseria gonorrhoeae FA19]
 gi|240113397|ref|ZP_04727887.1| hypothetical protein NgonM_07477 [Neisseria gonorrhoeae MS11]
 gi|240116255|ref|ZP_04730317.1| hypothetical protein NgonPID1_08470 [Neisseria gonorrhoeae PID18]
 gi|240121252|ref|ZP_04734214.1| hypothetical protein NgonPI_05693 [Neisseria gonorrhoeae PID24-1]
 gi|240124087|ref|ZP_04737043.1| hypothetical protein NgonP_09138 [Neisseria gonorrhoeae PID332]
 gi|240126296|ref|ZP_04739182.1| hypothetical protein NgonSK_08827 [Neisseria gonorrhoeae SK-92-679]
 gi|240128752|ref|ZP_04741413.1| hypothetical protein NgonS_09032 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494270|ref|ZP_05107441.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|260439930|ref|ZP_05793746.1| hypothetical protein NgonDG_02373 [Neisseria gonorrhoeae DGI2]
 gi|268595365|ref|ZP_06129532.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268597296|ref|ZP_06131463.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268599470|ref|ZP_06133637.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268601920|ref|ZP_06136087.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268682710|ref|ZP_06149572.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684880|ref|ZP_06151742.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268687137|ref|ZP_06153999.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291043209|ref|ZP_06568932.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293398537|ref|ZP_06642715.1| hypothetical protein NGNG_01196 [Neisseria gonorrhoeae F62]
 gi|59718717|gb|AAW90122.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|193934576|gb|ACF30400.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|226513310|gb|EEH62655.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268548754|gb|EEZ44172.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268551084|gb|EEZ46103.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268583601|gb|EEZ48277.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268586051|gb|EEZ50727.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268622994|gb|EEZ55394.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268625164|gb|EEZ57564.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268627421|gb|EEZ59821.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291012815|gb|EFE04798.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291611008|gb|EFF40105.1| hypothetical protein NGNG_01196 [Neisseria gonorrhoeae F62]
 gi|317164801|gb|ADV08342.1| hypothetical protein NGTW08_1380 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 358

 Score = 64.1 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 73/233 (31%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 107 ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 127

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAP---ASVPGIRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            T     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 171 ATGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 212


>gi|240118541|ref|ZP_04732603.1| hypothetical protein NgonPID_08787 [Neisseria gonorrhoeae PID1]
 gi|268604251|ref|ZP_06138418.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268588382|gb|EEZ53058.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
          Length = 358

 Score = 64.1 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 73/233 (31%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 107 ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 127

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAP---ASVPGIRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            T     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 171 ATGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 212


>gi|256381064|ref|YP_003104724.1| cell wall hydrolase/autolysin [Actinosynnema mirum DSM 43827]
 gi|255925367|gb|ACU40878.1| cell wall hydrolase/autolysin [Actinosynnema mirum DSM 43827]
          Length = 379

 Score = 64.1 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  +R  L   G L      S  FD  VE AV+ FQ + GL   G+V  +T
Sbjct: 4   LRRGDVGQDVAEVRATLTKLGLLT-DPHASRVFDLSVEHAVRTFQQQRGLITDGLVGPAT 62

Query: 162 LEAM 165
             A+
Sbjct: 63  YRAL 66



 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 25/129 (19%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLS 131
           A Y+ +               LG+               V  L+ERL+  G    +   +
Sbjct: 61  ATYRALRDAN---------YRLGDRPLAFLIAQPVTGDDVLTLQERLLELGY--DAGRAN 109

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQ--LQVNLMRIKKLLE 188
             F    E A++ FQ  +GL   GM    T+ A+  +   +R  +        R+++   
Sbjct: 110 GEFGQQTEQALRSFQSDYGLVVDGMCGPDTVRALRQLQPKVRGGRPVFLREQERVRRAGP 169

Query: 189 QKMGLRYVL 197
           +  G R ++
Sbjct: 170 RLSGKRIII 178


>gi|15616227|ref|NP_244532.1| N-acetylmuramoyl-L-alanine amidase (major autolysin) [Bacillus
           halodurans C-125]
 gi|10176289|dbj|BAB07384.1| N-acetylmuramoyl-L-alanine amidase (major autolysin) [Bacillus
           halodurans C-125]
          Length = 588

 Score = 64.1 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V +L++ L  +G    S   +  F +  ES VK FQ  HGL  +G+V S+
Sbjct: 179 TLRFGDRHPYVIQLKKDLAEAGF-PVSGSPTEYFGSVTESQVKAFQRAHGLTANGVVGSA 237

Query: 161 TLEAM 165
           T   +
Sbjct: 238 TYAKL 242



 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V +L++ L   G    S   +  F +  ES VK FQ  +GL   G+V S+
Sbjct: 330 TLRFGDRHPYVIQLKKDLAEVGF-PVSGSPTEYFGSVTESQVKAFQRAYGLTADGIVGSA 388

Query: 161 TLEAM 165
           T   +
Sbjct: 389 TYSKL 393



 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L  G+    V +L++ L  +G    S   +  F +  ES VK FQ  HGL  +G
Sbjct: 99  TVRPATLRFGDRHPYVIQLKKDLAEAGF-PVSGSPTEYFGSVTESQVKAFQRAHGLTANG 157

Query: 156 MVDSSTLEAM 165
           +V+S+T   +
Sbjct: 158 VVESATYAKL 167



 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V +L++ L  +G    S   +  F +  ES VK FQ  +GL   G+V S+
Sbjct: 254 TLRFGDRHPYVIQLKKDLAEAGF-PVSGSPTEYFGSVTESQVKAFQRTYGLTVDGIVGSA 312

Query: 161 TLEAM 165
           T   +
Sbjct: 313 TYSKL 317



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L LG    +V +L+  L  +G    S   +  F    E  VK FQ  +GL   G+  
Sbjct: 27  AQVLKLGTYDTAVIQLKIDLEKAGF-KVSDNPTTYFGPTTEQKVKEFQQAYGLTVDGIAG 85

Query: 159 SSTLEAM 165
            +TL  +
Sbjct: 86  PATLSKL 92


>gi|253701884|ref|YP_003023073.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
 gi|251776734|gb|ACT19315.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
          Length = 307

 Score = 64.1 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 52/166 (31%), Gaps = 49/166 (29%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKV--GLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            ++        ++VN+P   L     GK        + +G    +TP+    + + M NP
Sbjct: 100 WIVPHVKNDPDIVVNLPEYRLYLFSQGKPGGVFTFPLGIGDEGAETPLGSYTVIQKMTNP 159

Query: 243 YWVIPRSIIQKDM--MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            W +P SI + ++  +  +                                         
Sbjct: 160 SWHVPDSI-RHEVPELPQIV---------------------------------------- 178

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
            PG  N + +  +   SR N  +H T  P          + GC+R+
Sbjct: 179 PPGPSNPLGTHALRL-SRGNILIHGTNRPWGIGRRS---SHGCLRL 220


>gi|108758605|ref|YP_628829.1| penicillin-resistant DD-carboxypeptidase [Myxococcus xanthus DK
           1622]
 gi|5701723|dbj|BAA83081.1| penicillin-resistant DD-carboxypeptidase [Myxococcus xanthus]
 gi|108462485|gb|ABF87670.1| penicillin-resistant DD-carboxypeptidase [Myxococcus xanthus DK
           1622]
          Length = 302

 Score = 64.1 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G    +V +L+ +L  +G    +      F    +SAV+ FQ   GL   G+V   
Sbjct: 22  TLRSGARGAAVTQLQNKLRAAGFNPGASDG--VFGPKTQSAVQAFQRARGLQVDGIVGPK 79

Query: 161 TLEAMN 166
           T  A+N
Sbjct: 80  TWSALN 85



 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G     V+ L++RL + G    S      F    +SAVK FQ   GL   G+V   
Sbjct: 96  TLRNGARGEPVRALQQRLNVLGF--KSGTADGVFGPKTQSAVKAFQQSRGLVADGIVGPK 153

Query: 161 TLEAMNVPVD 170
           T + + + V 
Sbjct: 154 TWDKLGINVQ 163


>gi|312142018|ref|YP_004009354.1| n-acetylmuramoyl-l-alanine amidase cwlm [Rhodococcus equi 103S]
 gi|325677534|ref|ZP_08157198.1| N-acetylmuramoyl-L-alanine amidase [Rhodococcus equi ATCC 33707]
 gi|311891357|emb|CBH50678.1| N-acetylmuramoyl-L-alanine amidase cwlM [Rhodococcus equi 103S]
 gi|325551781|gb|EGD21479.1| N-acetylmuramoyl-L-alanine amidase [Rhodococcus equi ATCC 33707]
          Length = 400

 Score = 64.1 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 14/78 (17%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------------FDAYVESAVKLFQM 147
           L  G+   +V  +R  L   G L      +                FD +++SAV+ FQ 
Sbjct: 4   LRHGDHGPAVAEIRGTLTGLGFLHNGVAETQRESVNGSHWVSPDAMFDHHLDSAVRAFQQ 63

Query: 148 RHGLDPSGMVDSSTLEAM 165
           + GL   G+V  +T  ++
Sbjct: 64  QRGLLVDGIVGPATYRSL 81



 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 10/97 (10%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           I+   T    ++A   Y+ + +R    +L   PL  G+    V  L+ RL   G      
Sbjct: 72  IVGPATYRSLKEA--SYR-LGARTLIYQLSA-PL-YGD---DVAALQTRLQDLGFYVG-- 121

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   F      A+  FQ   G+   G+   +TL ++
Sbjct: 122 RVDGYFGPKTHEALSSFQREIGIAADGICGPATLRSL 158


>gi|209525841|ref|ZP_03274377.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209493814|gb|EDZ94133.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 472

 Score = 64.1 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V +++ RL   G L  S   +  F    ++AV  FQ  + L   G+V  +T
Sbjct: 54  LAIGDFGPEVTQIQNRLRALGYL--SANATGYFGEETQNAVIRFQRDNRLVQDGIVGPNT 111

Query: 162 LEAM 165
           + A+
Sbjct: 112 VVAL 115



 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  ++  L   G       ++  +D     AV+ FQM +GL P+G +  +
Sbjct: 213 SLGPGSFGPIVGLVQRELQRLGFFPGQ--ITNFYDEVTFQAVRNFQMVNGLTPTGFIGPT 270

Query: 161 TLEAM 165
           T   +
Sbjct: 271 TQSLL 275



 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L LG+    V  L++RL   G       +   F      AV  FQ  + +  +G V
Sbjct: 300 PSSILLLGSRGADVIALQQRLQQLGYYTGM--IDGVFGESTRVAVLRFQRDNAITQTGQV 357

Query: 158 DSSTLEAMNVPVDLR 172
             +T   +      R
Sbjct: 358 GPTTQFHLARATIQR 372



 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+S   V  L+ RL   G  +     +  F      AV  FQ  + +  +G+V   T
Sbjct: 140 LGLGDSGPGVTSLQNRLRNLGFFN--NNSTGYFGPITRDAVIRFQQANLIAATGLVTEDT 197

Query: 162 LEAMNV 167
           L  +N 
Sbjct: 198 LAILNR 203



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+  +V+R++ RL   G  +    ++  FD   ++AV  FQ  + +  +G+V  +T   
Sbjct: 400 GNAGENVRRIQRRLRELGFYNG--PINGFFDGQTQNAVIQFQQAYNITTTGIVGPTTETY 457

Query: 165 M-NVP 168
           + NV 
Sbjct: 458 LFNVT 462


>gi|332982674|ref|YP_004464115.1| cell wall hydrolase SleB [Mahella australiensis 50-1 BON]
 gi|332700352|gb|AEE97293.1| cell wall hydrolase SleB [Mahella australiensis 50-1 BON]
          Length = 238

 Score = 64.1 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG+       L +G+S   V +L+  L   G       ++  + +    AV  FQ   G
Sbjct: 30  SGGYTHAASTILKVGSSGSQVSQLQTALKQQGYF--YANVTGYYGSLTRDAVIRFQKDRG 87

Query: 151 LDPSGMVDSSTLEAM 165
           L   G+    TL A+
Sbjct: 88  LAADGIAGPQTLNAL 102


>gi|313885142|ref|ZP_07818894.1| peptidase, S41 family [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619833|gb|EFR31270.1| peptidase, S41 family [Eremococcus coleocola ACS-139-V-Col8]
          Length = 486

 Score = 64.1 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG  S SV  L   L   G    S      FD   E AVK FQ  H LD  G+V   T
Sbjct: 400 LSLGQHSDSVANLNVILNGMGY---SANQKDEFDQDTEKAVKAFQKDHDLDQDGIVTGDT 456

Query: 162 LEAMNVPVDLRIR 174
             A+N+     ++
Sbjct: 457 SAAINLAAQEYLQ 469


>gi|317130716|ref|YP_004096998.1| NLP/P60 protein [Bacillus cellulosilyticus DSM 2522]
 gi|315475664|gb|ADU32267.1| NLP/P60 protein [Bacillus cellulosilyticus DSM 2522]
          Length = 542

 Score = 64.1 bits (155), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V+ ++  L  +G  +    ++  +    +  V+ FQ   GL   G+    T
Sbjct: 139 LRVGSRGKDVEAVQTILKKTGFFNH-DAITGYYGTITQEGVRNFQRARGLKVDGIAGPQT 197

Query: 162 LEAMN 166
           + A+N
Sbjct: 198 IAALN 202



 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G  S  V  L+E+L   G  +     +  F      AV+ FQ  + L   G+V  
Sbjct: 35  KTLSFGVKSNDVVVLQEQLKEKGYFN-YPTATGYFGEVTRKAVQDFQRANNLKADGIVGP 93

Query: 160 STLEAM 165
            T  A+
Sbjct: 94  RTFAAL 99



 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L+  L   G       ++  F     +AV+ FQ  + L   G+    T
Sbjct: 253 LREGSQGEQVRTLQTALKELGYF--QGDVTTIFGPITRNAVRSFQQANSLKVDGVAGPQT 310

Query: 162 LEAM 165
            +A+
Sbjct: 311 FQAL 314



 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 7/102 (6%)

Query: 69  IISKETIAQTEKAIAFYQDILS-----RGGWPELPIRPLHLGNSSVSVQRLRERLIISGD 123
           +   +T    E+A+    +  S                L +G S V V  L+ RL + G 
Sbjct: 305 VAGPQTFQALERALTEKNNPSSTTPTSNNNANADATTLLRVGQSGVGVTELQARLKVLGY 364

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                  +  F    ++A+  FQ   GL   G+V  ST + +
Sbjct: 365 FKQEP--TGFFGDITKNALTQFQKDWGLVSDGLVTQSTWDKL 404


>gi|239629092|ref|ZP_04672123.1| peptidoglycan-binding domain 1 protein [Clostridiales bacterium
           1_7_47_FAA]
 gi|239519238|gb|EEQ59104.1| peptidoglycan-binding domain 1 protein [Clostridiales bacterium
           1_7_47FAA]
          Length = 559

 Score = 63.7 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V++L++RL+  G +D +   +  F    + AVK FQ ++ L   G+V ++T
Sbjct: 103 LRIGVRHEIVKKLQQRLMDLGFMD-NDEPTDYFGEMTQMAVKHFQRQNELPMDGIVGNAT 161

Query: 162 LEAM 165
            +A+
Sbjct: 162 WDAI 165



 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V   ++RL   G L  +     A+      AVK FQ R+     G +  ST
Sbjct: 248 LAYGEKSDVVLECQKRLKDLGYLTTTPDG--AYGEDTVVAVKQFQARNDQVVDGYLGPST 305

Query: 162 LEAMNVPVDLRIRQLQV 178
             A+N   D R   L +
Sbjct: 306 RIALN-SPDARANGLML 321



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 5/83 (6%)

Query: 88  ILSRGGWPELPIRPLHL-----GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           I+    W  +            G     +QR+++RL   G L  +  ++  F    E+AV
Sbjct: 156 IVGNATWDAIMAEDAKYYAVSKGTQGDDIQRIQQRLYELGYLASADLVTGNFGDSTEAAV 215

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
              Q  +GLD  G V   T+  +
Sbjct: 216 LKLQEVNGLDQDGKVGQRTINLL 238



 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+     L LG S  +V ++++ L   G L     ++  F    E A+K FQ R+GL   
Sbjct: 312 PDARANGLMLGESGDAVIKVQKLLNKHGYLVSGN-VTGYFGEATERAIKNFQSRNGLTSD 370

Query: 155 GMVDSSTLEAM 165
           G+V   T+  +
Sbjct: 371 GLVGVQTMAKL 381


>gi|251798289|ref|YP_003013020.1| cell wall hydrolase SleB [Paenibacillus sp. JDR-2]
 gi|247545915|gb|ACT02934.1| cell wall hydrolase SleB [Paenibacillus sp. JDR-2]
          Length = 212

 Score = 63.7 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 33/161 (20%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V+ L+ERL +         ++  F A  +SAV  FQ   GL P G+ 
Sbjct: 25  SAASLKVGSKGTEVKDLQERLYMLDYYKG--NITSYFSASTKSAVAAFQKGAGLKPDGVA 82

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
            S TL A++     R    ++     + +  +  G  Y               GK+ + +
Sbjct: 83  GSITLHALHKVTVDRSDLSRMA----RVVNAEAGGESY--------------KGKIAVAA 124

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPY----------WVIPR 248
            VI+ R   +T    S I  ++F P           W +P 
Sbjct: 125 -VILNRA--KTNGFPSTIRGVIFAPSAFSVVSNGQFWKMPT 162


>gi|310642862|ref|YP_003947620.1| cell wall hydrolase, sleb [Paenibacillus polymyxa SC2]
 gi|309247812|gb|ADO57379.1| cell wall hydrolase, SleB [Paenibacillus polymyxa SC2]
          Length = 217

 Score = 63.7 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 22/152 (14%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
             G  +     L  G  S  V  L+++L   G      G +  + +    AV  FQ  HG
Sbjct: 22  APGQAQAQSSALKKGIQSERVLELQQQLHSLGYFK--AGFTGYYGSLTSKAVARFQRDHG 79

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L P G+  ++T   ++    +R+  L       + +  +  G  +         +     
Sbjct: 80  LAPDGIAGAATQAKLDSFGKVRVTALD---QLARIIYSEARGESF------EGQVAV--- 127

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           G V L   V  G          S I  ++  P
Sbjct: 128 GAVVLN-RVQSG-------EFPSSIPDVILQP 151


>gi|289646814|ref|ZP_06478157.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 321

 Score = 63.7 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRA-SHGCFRMYNNNVLELADM 223


>gi|544113|sp|P36550|CWLL_BACLI RecName: Full=N-acetylmuramoyl-L-alanine amidase CwlL; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           Flags: Precursor
 gi|436573|dbj|BAA02647.1| CwlL protein [Bacillus licheniformis]
 gi|742336|prf||2009368D cell wall protein
          Length = 360

 Score = 63.7 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V+ L++RLI +G   P  G   +++     AVK  Q + G+   G+   +T
Sbjct: 196 LKKGASGSQVKALQKRLIAAGFSLPKYGADGSYENETVQAVKALQKKAGIAVDGIYGPAT 255

Query: 162 LEAM 165
            +A+
Sbjct: 256 EKAL 259



 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 104 LGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                  V++++E L            + G+   +     +AVK FQ+ HGL   G+  S
Sbjct: 290 PLMKGTGVRQIQEALAALYFYPDKGAKNNGIDGYYGPKTANAVKRFQLMHGLSADGIYGS 349

Query: 160 STLEAM 165
            T   +
Sbjct: 350 DTKAKL 355


>gi|313667851|ref|YP_004048135.1| hypothetical protein NLA_5060 [Neisseria lactamica ST-640]
 gi|313005313|emb|CBN86746.1| hypothetical protein NLA_5060 [Neisseria lactamica 020-06]
          Length = 340

 Score = 63.7 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 73/233 (31%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 107 ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 127

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 212


>gi|121534486|ref|ZP_01666309.1| NLP/P60 protein [Thermosinus carboxydivorans Nor1]
 gi|121306979|gb|EAX47898.1| NLP/P60 protein [Thermosinus carboxydivorans Nor1]
          Length = 219

 Score = 63.7 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 9/90 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                 G+    +  ++ RL   G      G    F    +SAV  FQ   GL+  G+V 
Sbjct: 24  SGVYEEGDQGPEIAAIQARLRELGYRLEVDGD---FGQATKSAVIAFQKDRGLEADGVVG 80

Query: 159 SSTLEAM---NVPVDLR---IRQLQVNLMR 182
           + T  A+   ++PV       R++    MR
Sbjct: 81  AQTYRALMGRDMPVSRDSSAARRVIQTAMR 110


>gi|307944091|ref|ZP_07659432.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307772437|gb|EFO31657.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 401

 Score = 63.7 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 75  IAQTEKAIAFYQDILSRGGWPEL--PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
            A   +    YQ I  +GG  +     R L LG+    V+ L+ERLI  G    + G   
Sbjct: 192 YAALMQ--TAYQRIA-KGGASKFNERGRMLRLGSDGYRVKALQERLITLGYHLQADGD-- 246

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            F       V  FQ+ HGL P G+V   T
Sbjct: 247 -FGPATRRQVVAFQVDHGLKPDGIVGPLT 274


>gi|256824326|ref|YP_003148286.1| cell wall-associated hydrolase, invasion-associated protein
           [Kytococcus sedentarius DSM 20547]
 gi|256687719|gb|ACV05521.1| cell wall-associated hydrolase, invasion-associated protein
           [Kytococcus sedentarius DSM 20547]
          Length = 422

 Score = 63.7 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +P+ LG +   V+ +  RL I         L          AVK FQ  HGL   G+V
Sbjct: 198 SGQPIKLGWTGTRVKLVLRRLGI-----DQGQLLHRMTPAAVDAVKRFQRAHGLTADGVV 252

Query: 158 DSSTLEAM 165
              T  AM
Sbjct: 253 GPRTWAAM 260



 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 30/65 (46%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL  G+    VQRL+  L   G++ P   L   + A    AV+ FQ R GL   G+  + 
Sbjct: 40  PLRPGHRGGYVQRLQWALNKVGNVTPKVALDGVYGAITTRAVRAFQTRQGLLVDGIAGTG 99

Query: 161 TLEAM 165
           T   +
Sbjct: 100 TKRRL 104


>gi|294632792|ref|ZP_06711351.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces sp. e14]
 gi|292830573|gb|EFF88923.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces sp. e14]
          Length = 248

 Score = 63.7 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVK 143
           D     GW     R L  G S   V  L+ R+       PS    G+  +F     +AV+
Sbjct: 32  DTARAYGW----SRTLSQGASGADVTELQIRVAGWAADSPSHSIVGVDGSFGPATAAAVR 87

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            FQ  +GL   G+   +T   +N
Sbjct: 88  RFQAAYGLGVDGVAGPATQAQLN 110


>gi|77460233|ref|YP_349740.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas fluorescens Pf0-1]
 gi|77384236|gb|ABA75749.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 323

 Score = 63.3 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 45/177 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    L     G+ V     + +GR    +PI H+ I     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRLYYYPKGRNVVYTFPLGIGREGWGSPIAHTTITAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPNVVPA 172

Query: 303 GKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
           G  N +   K    +       H + +   F   +R  + GC R+   N++++   +
Sbjct: 173 GPDNPLGPFKFTLGTPGYLI--HGSNKK--FGIGMRT-SHGCFRMFNNNVLEMASMV 224


>gi|269965347|ref|ZP_06179467.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269829993|gb|EEZ84222.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 308

 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 40/161 (24%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +  + +++N+    L     G+ +     V +GR+ R TP++ +RI++   NP W  P
Sbjct: 97  PDVPYKGIVINLAELRLYYFPKGEDIVHVFPVGIGRIGRDTPVMTTRISQKRPNPTWTPP 156

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + +  A     P  +                                    G  N 
Sbjct: 157 ASI-RAEYKAKGIDLPAVV----------------------------------PAGPDNP 181

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
           +    +     N  Y +H T +   F   +R  ++GC+R+ 
Sbjct: 182 LGMFALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRMD 219


>gi|91223276|ref|ZP_01258542.1| hypothetical protein V12G01_05516 [Vibrio alginolyticus 12G01]
 gi|91192089|gb|EAS78352.1| hypothetical protein V12G01_05516 [Vibrio alginolyticus 12G01]
          Length = 308

 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 40/161 (24%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +  + +++N+    L     G+ +     V +GR+ R TP++ +RI++   NP W  P
Sbjct: 97  PDVPYKGIVINLAELRLYYFPKGENIVHVFPVGIGRIGRDTPVMTTRISQKRPNPTWTPP 156

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + +  A     P  +                                    G  N 
Sbjct: 157 ASI-RAEYKAKGIDLPAVV----------------------------------PAGPDNP 181

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
           +    +     N  Y +H T +   F   +R  ++GC+R+ 
Sbjct: 182 LGMFALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRMD 219


>gi|150389177|ref|YP_001319226.1| spore cortex-lytic enzyme SleB [Alkaliphilus metalliredigens QYMF]
 gi|149949039|gb|ABR47567.1| Spore cortex-lytic enzyme SleB [Alkaliphilus metalliredigens QYMF]
          Length = 227

 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +  + L  G+S   V  L+ERL      D    +S  +      AV+LFQ  +GL   G
Sbjct: 25  SIYAQNLSWGSSGGEVTDLQERLTRWDYYDG--PISGTYGPQTHEAVRLFQRINGLTVDG 82

Query: 156 MVDSSTLEAMNV 167
           +V   T  A+ +
Sbjct: 83  IVGPQTRGALGM 94


>gi|188991086|ref|YP_001903096.1| hypothetical protein xccb100_1690 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167732846|emb|CAP51040.1| hypothetical protein with peptidoglycan-binding domain [Xanthomonas
           campestris pv. campestris]
          Length = 441

 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 3/74 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGL 151
           P      L  G     V++L+ +L   G +            F A  + AV+ FQ  HGL
Sbjct: 218 PSADDGKLEQGERGEQVKQLQGQLAQLGAIGRDGKPLHPDGDFGANTKHAVEQFQREHGL 277

Query: 152 DPSGMVDSSTLEAM 165
              G+V   T  A+
Sbjct: 278 QVDGVVGRQTQAAL 291


>gi|21244359|ref|NP_643941.1| hypothetical protein XAC3634 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110016|gb|AAM38477.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 306

 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L        V+ L++ L   G  D +        A+      AVK FQ  HGL   G+V 
Sbjct: 109 LRENARGAEVRTLQQTLQQLGYKDAAGNELKADGAYGQRTSDAVKAFQRAHGLQDDGVVG 168

Query: 159 SSTLEAM 165
             T  A+
Sbjct: 169 RDTQAAL 175


>gi|312883050|ref|ZP_07742781.1| hypothetical protein VIBC2010_07174 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369210|gb|EFP96731.1| hypothetical protein VIBC2010_07174 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 300

 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 59/175 (33%), Gaps = 42/175 (24%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           V++N+    L   + +G+      V +GR+ R TP++ + I++    P W  P SI +  
Sbjct: 92  VVINLAELRLYYFDPDGQTVHIFPVGIGRIGRDTPVMQTSISQKRIKPTWTPPDSIRK-- 149

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                     YL                         E          G  N + +  + 
Sbjct: 150 ---------SYLA------------------------EGIKLPPVVPAGPDNPLGNHALR 176

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                  Y +H T +   F   +R  +SGC+R+    D+  WL        R  I
Sbjct: 177 LAYGAGDYLIHGTNKD--FGVGLR-VSSGCIRME-PNDI-EWLFSQVQIGERVKI 226


>gi|222529549|ref|YP_002573431.1| spore cortex-lytic enzyme [Caldicellulosiruptor bescii DSM 6725]
 gi|222456396|gb|ACM60658.1| spore cortex-lytic enzyme [Caldicellulosiruptor bescii DSM 6725]
          Length = 225

 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 4/91 (4%)

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           IA YQ +  +     + +   + G++   V  +++RL   G  D        +  Y+  A
Sbjct: 20  IANYQHLKFKYALSPIILS--YYGSTGPEVIEIQKRLKQWGYYDGPIDGIYGYKTYM--A 75

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           V+ FQ ++GL   G+  S TL A+ +    R
Sbjct: 76  VRYFQAKNGLKVDGIAGSETLRALGIVTTTR 106


>gi|92113690|ref|YP_573618.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043]
 gi|91796780|gb|ABE58919.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043]
          Length = 387

 Score = 63.3 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 55/169 (32%), Gaps = 47/169 (27%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAV---ENGKVGL--RSTVIVGRVDRQTPILHSRINRI 238
           + +L        V+VNIP   L      + G+        + VGR+D  TP+  +RI   
Sbjct: 129 RFILP-DTPYEGVVVNIPEMRLYYYPPRKEGEPQRVETYAISVGRMDWSTPLGETRITAK 187

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
             NP W  P+SII++                                   ++ +      
Sbjct: 188 QENPPWYPPQSIIEE-----------------------------------HAADGRELPD 212

Query: 299 RQDPGKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV 346
              PG  N +   K+           H T  P      +R  T GC+R+
Sbjct: 213 VVPPGPDNPLGKYKMRLGLPGYLI--HGTNRPQ--GVGMR-VTHGCIRM 256


>gi|78049307|ref|YP_365482.1| hypothetical protein XCV3751 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037737|emb|CAJ25482.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 630

 Score = 63.3 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
             L        V+ L++ L   G  D          A+      AVK FQ  HGL   G+
Sbjct: 431 GVLRENARGAEVRTLQQTLQQLGYKDAGGNELKADGAYGQRTSEAVKAFQRAHGLQDDGV 490

Query: 157 VDSSTLEAM 165
           V   T  A+
Sbjct: 491 VGRDTQAAL 499


>gi|134300529|ref|YP_001114025.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
 gi|134053229|gb|ABO51200.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
          Length = 315

 Score = 63.3 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 20/135 (14%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           P +       V  L+E L      +     +  +D+  + A++ +Q  H L   G+VD  
Sbjct: 46  PANPPMQGKDVVDLQEELKALNYYNG--PTNGIYDSLTQRALRKYQQDHYLKNDGVVDWE 103

Query: 161 TLEAMNVPVDLRIRQLQVNLMR-----IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           T              L +NL +      K L     G   ++++     L  + +GK   
Sbjct: 104 TW-----------HSLALNLEKPVTKSEKTLPP--TGDMAIIIDTTTRKLTVLSDGKPYT 150

Query: 216 RSTVIVGRVDRQTPI 230
           +  V  G+    +P+
Sbjct: 151 QFNVACGKPSTPSPV 165



 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+    V  ++  L   G  +    +   F   +E+ +K F+  +GL     VDS
Sbjct: 250 KKLVRGDRGADVFEVQRTLKRLGYYEAQ--IDGIFGYSMEAGIKKFRKANGLPMDNFVDS 307

Query: 160 STLEAM 165
              +A+
Sbjct: 308 KMYKAL 313


>gi|296315100|ref|ZP_06865041.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria polysaccharea ATCC
           43768]
 gi|296838011|gb|EFH21949.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria polysaccharea ATCC
           43768]
          Length = 326

 Score = 63.3 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 73/233 (31%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 33  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 93  ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 113

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 114 RLGDPKLGLGIHGTNAP---TSVPGVRSHGCVRMKSPDAL--------------EFAKTI 156

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 157 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 198


>gi|167945516|ref|ZP_02532590.1| general secretion pathway protein A [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 99

 Score = 63.3 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            G+    V  LR RL +S  +   + G+S  FD  +   ++ +Q+R GL P G+    T 
Sbjct: 16  PGSDGPLVTWLRRRLALSNGIKLSADGVSQQFDEELGVQLREYQLRTGLKPDGVAGQKTQ 75

Query: 163 EAMN 166
             +N
Sbjct: 76  IQLN 79


>gi|331016238|gb|EGH96294.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 333

 Score = 63.3 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPNVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|325924744|ref|ZP_08186181.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
 gi|325544836|gb|EGD16182.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
          Length = 630

 Score = 63.3 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSGM 156
             L        V+ L++ L   G  D          A+      AVK FQ  HGL   G+
Sbjct: 431 GVLRENARGAEVRTLQQTLQQLGYKDAGGNEIKADGAYGQRTSEAVKAFQRAHGLQDDGV 490

Query: 157 VDSSTLEAM 165
           V   T  A+
Sbjct: 491 VGRDTQAAL 499


>gi|225568373|ref|ZP_03777398.1| hypothetical protein CLOHYLEM_04450 [Clostridium hylemonae DSM
           15053]
 gi|225162821|gb|EEG75440.1| hypothetical protein CLOHYLEM_04450 [Clostridium hylemonae DSM
           15053]
          Length = 267

 Score = 63.3 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 29/64 (45%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S    + L+E+LI  G    S G         + AVK +Q  HGL   G+V  +T
Sbjct: 201 LSPGASGGITKLLQEKLISLGYSCGSSGADGILGQDTQRAVKAYQKDHGLAADGIVGPAT 260

Query: 162 LEAM 165
            + +
Sbjct: 261 WKKL 264


>gi|262204653|ref|YP_003275861.1| cell wall hydrolase/autolysin [Gordonia bronchialis DSM 43247]
 gi|262088000|gb|ACY23968.1| cell wall hydrolase/autolysin [Gordonia bronchialis DSM 43247]
          Length = 396

 Score = 63.3 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 28/81 (34%), Gaps = 17/81 (20%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLS-----------------VAFDAYVESAVKL 144
             LG+   +V  +R  L   G L                          FDA  + AV+ 
Sbjct: 4   FRLGDHGSAVAEIRSILAGRGLLSAPSSQPTGLTNGTRSADGWTAPEDIFDAETDHAVRA 63

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           FQ   GL   G+V  +T  A+
Sbjct: 64  FQQERGLIVDGIVGPATYRAL 84



 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V  L+ RL   G    +  +   F    ++AV+L+Q  +GL   G+   +TL ++
Sbjct: 104 MVGDDVATLQSRLQNLGYY--TSLVDGVFGESTDNAVRLYQSEYGLSSDGICGPATLRSL 161


>gi|145223739|ref|YP_001134417.1| peptidoglycan binding domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315444065|ref|YP_004076944.1| negative regulator of beta-lactamase expression [Mycobacterium sp.
           Spyr1]
 gi|145216225|gb|ABP45629.1| Peptidoglycan-binding domain 1 protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315262368|gb|ADT99109.1| negative regulator of beta-lactamase expression [Mycobacterium sp.
           Spyr1]
          Length = 288

 Score = 63.3 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 15/82 (18%)

Query: 95  PELPIRP-----LHLGNSSVSVQRLRERL-----IISGDLDPSKGLSVAFDAYVESAVKL 144
           P +P+       L+ G+    V  L+ RL       +GDL     +   +    E+AV+ 
Sbjct: 199 PTVPVGEYAEVLLYRGSRGPQVAELQRRLKHAYAAYAGDL----RIDGVYGPDTEAAVRE 254

Query: 145 FQMR-HGLDPSGMVDSSTLEAM 165
           FQ R  GL   G+V  +T  A+
Sbjct: 255 FQRRTAGLKVDGVVGPATAAAL 276


>gi|253573824|ref|ZP_04851167.1| spore cortex-lytic enzyme [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251847352|gb|EES75357.1| spore cortex-lytic enzyme [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 240

 Score = 62.9 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +     L LG++S  V  L+ RL   G  +    L+  +    + AV+ FQ R+GL   G
Sbjct: 51  QAASGTLKLGSTSGDVWDLQYRLKALGIFNEQ--LTGYYGTKTQQAVRTFQSRYGLQVDG 108

Query: 156 MVDSSTLEAM 165
           +    T  A+
Sbjct: 109 VAGPQTWAAL 118


>gi|28210330|ref|NP_781274.1| gamma-D-glutamyl-L-diamino acid endopeptidase I [Clostridium tetani
           E88]
 gi|28202767|gb|AAO35211.1| gamma-D-glutamyl-L-diamino acid endopeptidase I [Clostridium tetani
           E88]
          Length = 423

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+    V+ ++  L   G    +  +   + +  E+AV+ FQ   GL   G+V  +T
Sbjct: 4   LKLGSRGPRVREVQSILKQMGYYRGT--VDGIYGSQTEAAVRNFQKNMGLIADGIVGENT 61

Query: 162 LEAM 165
             A+
Sbjct: 62  YRAL 65


>gi|332709864|ref|ZP_08429820.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332351235|gb|EGJ30819.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 393

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 18/130 (13%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGW---------------PELPIRPLHLGNSSV 109
           +D P + KE+I +  + +  Y+ +     +                 L  R L  G    
Sbjct: 17  ADTPAVLKESIQKLFQWLKEYKLVAYHRIYLLLLIAILSIVGMAEEALAQRVLREGRRGA 76

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            V  ++ RL   G  +     +  F +  ++AV  FQ + GL   G V   T   +  P 
Sbjct: 77  DVTEVQRRLRELGYFNRQP--TGYFGSITKNAVIRFQRKKGLPADGEVGPRTRAKL-FPS 133

Query: 170 DLRIRQLQVN 179
             R    + N
Sbjct: 134 QTRAAPSRRN 143



 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+   +V  ++ +L   G  +     +  F    E AV  FQ  +GL   G+
Sbjct: 144 VTQSGLRRGSRGSAVTEVQRQLRQLGYFNADP--TGYFGPVTEQAVIEFQTDYGLRADGI 201

Query: 157 VDSSTLEAM 165
           V S T   +
Sbjct: 202 VGSQTRAEL 210



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 6/80 (7%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR-HGLDPS 154
            +    L  G+    V+RL+E L   G    +  +   +    E AV  FQ+R + L P+
Sbjct: 246 PIRRSELRPGDRGPEVRRLQEELRSRGFNPGA--IDGRYGEETEDAVFKFQIRNNNLLPT 303

Query: 155 GMVDSSTLEAM---NVPVDL 171
           G+ D  TL+A+   N+  + 
Sbjct: 304 GIADLQTLQALGLININPEA 323


>gi|261401380|ref|ZP_05987505.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria lactamica ATCC 23970]
 gi|269208587|gb|EEZ75042.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria lactamica ATCC 23970]
          Length = 326

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 73/233 (31%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 33  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 93  ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 113

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 114 RLGDPKLGLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 156

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 157 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 198


>gi|157960800|ref|YP_001500834.1| peptidoglycan-binding domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157845800|gb|ABV86299.1| Peptidoglycan-binding domain 1 protein [Shewanella pealeana ATCC
           700345]
          Length = 558

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 94  WPELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +P  +G S+    +Q L   L    D   +  L   FD+ +E  +K FQ +HGL
Sbjct: 469 WQAPQNQPKEIGQSANQAQIQWLENSLARIND--RAPRLVDYFDSELEQQLKAFQRQHGL 526

Query: 152 DPSGMVDSSTLEAMN 166
              G+  + TL  +N
Sbjct: 527 SADGIAGTQTLIQLN 541


>gi|330958991|gb|EGH59251.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 321

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 53/176 (30%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 172

Query: 303 GKINAMASTKIEF-YSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K     S      H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGLGMSGYLI--HGSNKK--FGIGMRT-SHGCFRMYNDNVLELADM 223


>gi|17229032|ref|NP_485580.1| hypothetical protein alr1540 [Nostoc sp. PCC 7120]
 gi|17135360|dbj|BAB77906.1| alr1540 [Nostoc sp. PCC 7120]
          Length = 128

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           ++    L  G+S  +V  L+  L   G       +   F A  ++AV  FQ  +GL   G
Sbjct: 11  KVAEPVLRQGDSGAAVTELQRLLNAKG---VKVSVDGIFGAGTQAAVIKFQRANGLTADG 67

Query: 156 MVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           +V S T  A+       +R+  + +N     +   Q   L ++   IPAA+L
Sbjct: 68  IVGSKTWVALRKVPTPTIRLVDVALNYD-PTQFPHQVAALEWLQSQIPAATL 118


>gi|288554241|ref|YP_003426176.1| endopeptidase SpoIID/LytB [Bacillus pseudofirmus OF4]
 gi|288545401|gb|ADC49284.1| cell wall lytic activity, endopeptidase (spoIID/lytB) [Bacillus
           pseudofirmus OF4]
          Length = 527

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L L N   +V  L+++L   G    S  ++  F    +SAVK FQ  H L   G+V ++
Sbjct: 230 TLRLNNHGDAVSSLQQKLKDLGYYTSS--ITGTFGPQTDSAVKDFQRAHNLVADGIVGAN 287

Query: 161 TLEAM 165
           T  A+
Sbjct: 288 TYRAL 292



 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G +S +VQ L++ L  +G  + +   +  +      AV+ FQ +  L   G+    T
Sbjct: 140 LRQGTTSGAVQELQQLLSRAGHFNSNA--TGYYGRVTTEAVRAFQRQQNLTVDGIAGPKT 197

Query: 162 LEAM 165
           + A+
Sbjct: 198 ITAL 201



 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G +  +V  ++ +L   G    +   +  +    E AV+ FQ + GL   G+   +T
Sbjct: 326 LRIGTTGAAVTNMQAQLRTIGLFGQAP--TGYYGTVTEQAVRAFQRQQGLTVDGIAGPAT 383

Query: 162 LEAM 165
           L  +
Sbjct: 384 LGKL 387



 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G +   V+ L++ L   G  +     +  + +    AVK FQ  +GL  +G
Sbjct: 44  ALGDQALSEGMNDPDVKDLQKALKDRGHFN-YHTATGYYGSITTEAVKAFQKANGLPATG 102

Query: 156 MVDSSTLEAM 165
             D +TL  +
Sbjct: 103 NADLATLAQL 112


>gi|156976350|ref|YP_001447256.1| hypothetical protein VIBHAR_05123 [Vibrio harveyi ATCC BAA-1116]
 gi|156527944|gb|ABU73029.1| hypothetical protein VIBHAR_05123 [Vibrio harveyi ATCC BAA-1116]
          Length = 308

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 63/202 (31%), Gaps = 55/202 (27%)

Query: 189 QKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +  + +++N+    L        V     V +GR+ R TP + + I++   NP W  P
Sbjct: 97  PDVPHKGIVINLAELRLYYFPAKENVVHIFPVGIGRIGRDTPEMTTSISQKRPNPTWTPP 156

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + +  A     P  +                                    G  N 
Sbjct: 157 SSI-RAEYKAKGIDLPAVV----------------------------------PAGPDNP 181

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           +    +     +  Y +H T +   F   +R  +SGC+R+              P    +
Sbjct: 182 LGMFALRLAYGHGEYLIHGTNKD--FGIGMR-VSSGCIRM-------------DPNDIEW 225

Query: 367 HIEEVVKTRKTTPVKLATEVPV 388
             ++V +  K   +     V V
Sbjct: 226 LFDKVRRGEKVKIIN--QPVKV 245


>gi|170731554|ref|YP_001763501.1| peptidoglycan binding domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169814796|gb|ACA89379.1| Peptidoglycan-binding domain 1 protein [Burkholderia cenocepacia
           MC0-3]
          Length = 266

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 3/115 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG+    V  L+ +L+ +G           + +   SAV  FQ  HGL   G+   
Sbjct: 3   KTLRLGDRGADVSYLQRQLVAAG---ARLDTDAIYGSATRSAVMAFQASHGLVADGIAGP 59

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            T   ++            +L R    L+  +     +  + +     + +G+  
Sbjct: 60  KTWSTLSAGRRDPRHLTDADLQRAADRLQVDLAAVRAVNEVESRGAGFLPDGRPV 114


>gi|312622221|ref|YP_004023834.1| spore cortex-lytic enzyme [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202688|gb|ADQ46015.1| spore cortex-lytic enzyme [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 225

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 4/91 (4%)

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           IA YQ +  +     + +   + G++   V  +++RL   G  D        +  Y+  A
Sbjct: 20  IANYQHLKFKYALSPIILS--YYGSTGPEVIEIQKRLKQWGYYDGPIDGIYGYKTYM--A 75

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           V+ FQ ++GL   G+  S TL A+ +    R
Sbjct: 76  VRYFQAKNGLKVDGIAGSETLRALGIVTTTR 106


>gi|160880026|ref|YP_001558994.1| peptidoglycan binding domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|160428692|gb|ABX42255.1| Peptidoglycan-binding domain 1 protein [Clostridium phytofermentans
           ISDg]
          Length = 635

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 31/63 (49%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG     ++R+++RL   G L  +  ++  F    ESAVK  Q  +GL   G V   T+
Sbjct: 248 KLGMDGADIKRIQQRLYEMGYLATADMVTGHFGDVTESAVKKMQENNGLGVDGKVGKMTV 307

Query: 163 EAM 165
           + +
Sbjct: 308 DLL 310



 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G    +V  +++RL+  G ++ ++  +  + +    AVK+FQ +  L   G++   T E
Sbjct: 177 IGVRHSTVMEIQQRLMDLGFMEDAEP-TDYYGSITAEAVKMFQRQSDLKQDGILGPDTFE 235

Query: 164 AM 165
            +
Sbjct: 236 ML 237



 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG+S  +V+R++E L   G L  S  ++  F    E AVK FQ  +GL   G V   T+ 
Sbjct: 393 LGDSGDAVKRIQELLNKYGYLS-SANMTGYFGEVTEDAVKSFQKNNGLSADGNVGVMTMT 451

Query: 164 AMNVPVDLRI 173
            +     ++ 
Sbjct: 452 KLTSSDVVKA 461



 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G  S  V   ++RL   G L  +      +      AVK FQ R+ L   G +  ST
Sbjct: 320 IAYGEQSDIVLAAQKRLKELGYLTTTPDG--KYGNDTSVAVKQFQSRNDLVVDGFLGPST 377

Query: 162 LEAM 165
            E +
Sbjct: 378 REVL 381


>gi|302871645|ref|YP_003840281.1| spore cortex-lytic enzyme [Caldicellulosiruptor obsidiansis OB47]
 gi|302574504|gb|ADL42295.1| spore cortex-lytic enzyme [Caldicellulosiruptor obsidiansis OB47]
          Length = 225

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G++   V  ++ RL   G  D        +  Y+  AV+ FQ ++GL   G+  S TL 
Sbjct: 40  YGSTGPEVIEIQRRLKQWGYYDGPIDGIYGYKTYM--AVRYFQAKNGLKVDGIAGSETLR 97

Query: 164 AMNVPVDLR 172
           A+ +    R
Sbjct: 98  ALGIVTTTR 106


>gi|113478151|ref|YP_724212.1| peptidoglycan binding domain-containing protein [Trichodesmium
           erythraeum IMS101]
 gi|110169199|gb|ABG53739.1| Peptidoglycan-binding domain 1 [Trichodesmium erythraeum IMS101]
          Length = 163

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH G+    V +L+ +L + G     +     F    + AVK FQ   GL   G+V   T
Sbjct: 99  LHHGSRGHRVAKLQHQLGLMGYFHHPRATG-YFGHKTKYAVKAFQRDVGLRADGIVGPRT 157

Query: 162 LEAM 165
             A+
Sbjct: 158 RAAL 161


>gi|53802744|ref|YP_112601.1| general secretion pathway protein A [Methylococcus capsulatus str.
           Bath]
 gi|53756505|gb|AAU90796.1| general secretion pathway protein A [Methylococcus capsulatus str.
           Bath]
          Length = 549

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   +  L  G SS +V+ LR+                 FD  +++ V  FQ +HGL   
Sbjct: 470 PAANVTVLRPGESSPAVKWLRQHFPA----KKKPADPQRFDEALKAQVAAFQKQHGLIVD 525

Query: 155 GMVDSST-LEAMNVP 168
           G V   T +  +N  
Sbjct: 526 GTVGPHTFIRLLNET 540


>gi|52081895|ref|YP_080686.1| N-acetylmuramoyl-L-alanine amidase [Bacillus licheniformis ATCC
           14580]
 gi|52787285|ref|YP_093114.1| BlyA [Bacillus licheniformis ATCC 14580]
 gi|52005106|gb|AAU25048.1| N-acetylmuramoyl-L-alanine amidase [Bacillus licheniformis ATCC
           14580]
 gi|52349787|gb|AAU42421.1| BlyA [Bacillus licheniformis ATCC 14580]
          Length = 359

 Score = 62.9 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V+ L++RLI +G   P  G   ++      AVK  Q + G+   G+   +T
Sbjct: 195 LKKGASGSQVKALQKRLIAAGFSLPKYGADGSYGNETVQAVKALQKKAGIAVDGIYGPAT 254

Query: 162 LEAM 165
            +A+
Sbjct: 255 EKAL 258



 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 7/67 (10%)

Query: 106 NSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
               +V +++E L            + G+   +     +AVK FQ+ HGL   G+    T
Sbjct: 291 MKGTAVWQIQEALAALYFYPDKEAKNNGIDGYYGPKTANAVKRFQLMHGLSADGIYGPKT 350

Query: 162 ---LEAM 165
              +EA+
Sbjct: 351 KAKIEAL 357


>gi|300864057|ref|ZP_07108957.1| hypothetical protein OSCI_580016 [Oscillatoria sp. PCC 6506]
 gi|300337936|emb|CBN54103.1| hypothetical protein OSCI_580016 [Oscillatoria sp. PCC 6506]
          Length = 203

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+  I+ L LG+S+  V++L+ +L   G           +   V  AV+ FQ    L+  
Sbjct: 128 PQTGIKLLKLGSSNGCVKQLQLQLAALGYYRGKINGRFEYSTQV--AVQQFQQDSSLEAD 185

Query: 155 GMVDSSTLEAMN 166
           G+V S T +A+N
Sbjct: 186 GIVGSVTRKALN 197



 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 24/55 (43%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V  L+ RL   G    +   +  F    + A+  FQ  + L  SG++DS T   +
Sbjct: 64  VVELQNRLKELGYFPKNVKSTGFFGTITQEALAEFQCANNLLSSGILDSETSAKL 118


>gi|319644741|ref|ZP_07998974.1| N-acetylmuramoyl-L-alanine amidase cwlL [Bacillus sp. BT1B_CT2]
 gi|317392550|gb|EFV73344.1| N-acetylmuramoyl-L-alanine amidase cwlL [Bacillus sp. BT1B_CT2]
          Length = 359

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+S   V+ L++RLI +G   P  G   ++      AVK  Q   G+   G+   +T
Sbjct: 195 LKKGSSGSKVRALQKRLIAAGFSLPKYGADGSYGDETVQAVKALQKNAGIAVDGIYGPAT 254

Query: 162 LEAM 165
            +A+
Sbjct: 255 EKAL 258



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 4/66 (6%)

Query: 104 LGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                  V++++E L            + G+   +     +AVK FQ+ +GL   G+   
Sbjct: 289 PLMKGTGVRQIQEALAALYFYPDKGAKNNGIDGYYGPKTANAVKRFQLMYGLSADGIYGP 348

Query: 160 STLEAM 165
            T   +
Sbjct: 349 KTKAKL 354


>gi|172041696|ref|YP_001801410.1| putative hydrolase [Corynebacterium urealyticum DSM 7109]
 gi|171853000|emb|CAQ05976.1| putative hydrolase [Corynebacterium urealyticum DSM 7109]
          Length = 408

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 12/76 (15%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPS------------KGLSVAFDAYVESAVKLFQMRH 149
           L +G+ S  V  +R  L   G L                     FDA + +A++ FQ + 
Sbjct: 21  LTVGDKSPRVAEVRSALARLGMLSDYGAALTASNNEQWSEEEEFFDAVLATALRAFQQQR 80

Query: 150 GLDPSGMVDSSTLEAM 165
           G+   G+++ +TL A+
Sbjct: 81  GIIADGVINETTLRAL 96



 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 39/106 (36%), Gaps = 17/106 (16%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPL-----HLGNS----------SVSVQRLRERLI 119
           +A   +A    + I++ G   E  +R L      LGN              V  L+ +L 
Sbjct: 69  LATALRAFQQQRGIIADGVINETTLRALREASYKLGNRVLSLQDPQYVGDDVSELQSQLY 128

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             G       +   F      AV  +Q  +GL+  GMV   TL A+
Sbjct: 129 DLGFYTG--RVDGHFGPDTHQAVTQYQFEYGLNSDGMVGPDTLRAL 172


>gi|56421723|ref|YP_149041.1| cell wall lytic activity [Geobacillus kaustophilus HTA426]
 gi|56381565|dbj|BAD77473.1| cell wall lytic activity [Geobacillus kaustophilus HTA426]
          Length = 451

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 14/137 (10%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD--------ILSRGG 93
           E    + +        R+        P  +    A TE+A+  +Q         I+    
Sbjct: 27  EWKKGMSSPEIKQLQQRLKEKGFFTYPQATGYFGAITEEAVKAFQRAMNLPATGIVDDAT 86

Query: 94  WPELPIRP-----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           + +L   P     L +G+   +V  L+ RL   G       ++  + A    AVK FQ  
Sbjct: 87  YAKLKSAPASNDTLAIGSRGAAVSDLQRRLKQLGYF-RYPQITGYYGAVTADAVKQFQRA 145

Query: 149 HGLDPSGMVDSSTLEAM 165
           +GL  +G  D +TLE +
Sbjct: 146 NGLPATGRADRATLERL 162



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L +G     V++L+++L   G    S  ++  +      A++ FQ  +GL  +G V
Sbjct: 173 PSAALTVGARGDEVRKLQQQLKQLGYFTYSD-ITGYYGVLTADAIRRFQRDNGLPVTGAV 231

Query: 158 DSSTLEAM 165
           D+ T   +
Sbjct: 232 DNQTAARL 239



 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V+R++ +L   G       ++  +      AV+ FQ    L  +G+VDS T
Sbjct: 262 LSIGALGEDVKRIQTKLKELGYF--YTAITGYYGTATADAVRRFQQAAKLPATGIVDSET 319

Query: 162 L-EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
               +      ++  +++          + +G  YV 
Sbjct: 320 YERLLGQAPPTKVDVIELVAD-----AAELLGTPYVW 351


>gi|325288682|ref|YP_004264863.1| NLP/P60 protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324964083|gb|ADY54862.1| NLP/P60 protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 222

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G++  SV  L+ +L   G    +      F    ++AVK FQ    L P G+V   T
Sbjct: 30  LKMGSTGSSVVELQIKLSSLGY--SAGTADGIFGPKTQAAVKTFQSSTSLTPDGIVGPLT 87

Query: 162 LEAMNVPVDLRIRQLQVN 179
             A+N     ++R  + N
Sbjct: 88  QNALN-SAYAKVRTTEAN 104


>gi|255659253|ref|ZP_05404662.1| endopeptidase, cell wall lytic activity [Mitsuokella multacida DSM
           20544]
 gi|260848708|gb|EEX68715.1| endopeptidase, cell wall lytic activity [Mitsuokella multacida DSM
           20544]
          Length = 217

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 94  WPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W  +       +G+    V  ++ +L   G          A+      AVK FQM  G++
Sbjct: 14  WFSVAGASAFRVGDQGSDVAEIQGQLANLGY---DVTADGAYGPATVEAVKSFQMTQGIN 70

Query: 153 PSGMVDSSTLEAM 165
             G+V  ST  A+
Sbjct: 71  ADGLVGPSTYAAL 83


>gi|110635068|ref|YP_675276.1| peptidoglycan binding domain-containing protein [Mesorhizobium sp.
           BNC1]
 gi|110286052|gb|ABG64111.1| Peptidoglycan-binding domain 1 [Chelativorans sp. BNC1]
          Length = 300

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 8/106 (7%)

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRG--GWPELPIRPL-HLGNSSVSVQRLRERLIISG 122
           + P  ++ +      A+A Y+ +  +     P     PL   G+   +V+ L+  L  +G
Sbjct: 172 NGPGFARNSY-HLRLALA-YRRLAGQAVRSAPSQATTPLIRSGDRGAAVRNLQILLSAAG 229

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
               + G    F A  + A+  FQ  HGL   G+   +T++ +   
Sbjct: 230 YPVSADG---IFGAKTQQALLSFQRHHGLPADGIAGPATMKVLQGS 272


>gi|134301026|ref|YP_001114522.1| cell wall hydrolase SleB [Desulfotomaculum reducens MI-1]
 gi|134053726|gb|ABO51697.1| cell wall hydrolase, SleB [Desulfotomaculum reducens MI-1]
          Length = 234

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L+ G+S   V+ +++RL   G  D    +   F     SAV+ FQ  HGL   G+V   
Sbjct: 32  TLYWGSSGTKVRAVQQRLKDWGYYDG--PVDGYFSGKTASAVRKFQAYHGLATDGIVGPK 89

Query: 161 TLEAM 165
           T  AM
Sbjct: 90  TFSAM 94


>gi|156743286|ref|YP_001433415.1| peptidoglycan binding domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156234614|gb|ABU59397.1| Peptidoglycan-binding domain 1 protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 629

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSV-SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P+     L  G+S    +  L+ERL   G   P+  +   F    ++A + FQ RHGL  
Sbjct: 94  PQSSRPTLRQGSSHAEDITFLQERLNSDG-ATPALEVDGIFGPLTDAATREFQRRHGLIV 152

Query: 154 SGMVDSSTLEAMN 166
            G+V   T  A+N
Sbjct: 153 DGIVGPQTWGALN 165


>gi|21228276|ref|NP_634198.1| hypothetical protein MM_2174 [Methanosarcina mazei Go1]
 gi|20906735|gb|AAM31870.1| conserved protein [Methanosarcina mazei Go1]
          Length = 309

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 34/66 (51%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S  +V++++E LI      P  G +  F    E AV+ +Q   GL   G++ S
Sbjct: 28  RVLRRGDSGPAVKKIQEALIFLEIPVPGAGANGIFGDETELAVRSYQEARGLKVDGVIGS 87

Query: 160 STLEAM 165
            T+ ++
Sbjct: 88  ETIGSL 93


>gi|297585348|ref|YP_003701128.1| NLP/P60 protein [Bacillus selenitireducens MLS10]
 gi|297143805|gb|ADI00563.1| NLP/P60 protein [Bacillus selenitireducens MLS10]
          Length = 507

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G S  SV+ L+ RL   G       ++  F    +SAV  FQ   GL   G+  + 
Sbjct: 231 TLREGMSGDSVRALQTRLKDLGHYH--HRVTGIFGPLTKSAVISFQRNEGLTADGIAGAR 288

Query: 161 TLEAM 165
           TL+AM
Sbjct: 289 TLKAM 293



 Score = 59.1 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 1/69 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             R L  G     V+ L+  L   G L+  +     F       V+ FQ   GL   G+ 
Sbjct: 136 SSRLLREGVRGQDVEALQLALKQKGFLNIERATG-YFGTVTAKGVRDFQQARGLKVDGIA 194

Query: 158 DSSTLEAMN 166
              T+  +N
Sbjct: 195 GPQTIGRLN 203



 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G     V  L+  L   G        +  F    E AV+ FQ    +   G+V  
Sbjct: 35  QTLRQGMDHPDVVELQTMLKDKGYFT-YHTATGYFGTITEEAVRKFQREANIQVDGVVGP 93

Query: 160 STLEAM 165
            T   +
Sbjct: 94  ETYRQL 99



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 12/95 (12%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           I    T+   ++A A           P      L  G++  +V+ L+ERL  +G      
Sbjct: 284 IAGARTLKAMQQASAA----------PAPTGFLLKEGDTGSNVRELQERLKATGHYK--H 331

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            ++  F    + AV+ FQ +  L   G+V +S  E
Sbjct: 332 NVTGTFGPITKEAVRSFQSQWSLVNDGIVTASVWE 366


>gi|304436897|ref|ZP_07396861.1| endopeptidase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370096|gb|EFM23757.1| endopeptidase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 220

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
                 +G+    V  ++ +L   G    + G    F      AVK FQ  HGL   G+V
Sbjct: 22  SAESFQIGDQGTDVAEIQGQLSNYGYDVAADGD---FGPATAEAVKEFQAAHGLAVDGLV 78

Query: 158 DSSTLEAM 165
             ST EA+
Sbjct: 79  GPSTYEAL 86


>gi|224826667|ref|ZP_03699768.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
 gi|224601268|gb|EEG07450.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
          Length = 305

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 43/166 (25%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +V++N+P   L    +G +     V VG++  QTP     +  I   P W +P+SI Q++
Sbjct: 43  HVVINLPQTRLFVYRDGTLLKSYPVAVGKMLTQTPTGTYAVTGIYPKPIWYVPKSI-QEE 101

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--TK 312
           M                    ++GK V                    PG  N + +   +
Sbjct: 102 M-------------------KQQGKPVLTSV---------------PPGPDNPLGNAFVR 127

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
                R    MH T  P    +V  F + GCVR+   +I +L   +
Sbjct: 128 FGDP-RLGLGMHGTNVP---TSVPGFRSHGCVRLKNEDIDELASTV 169


>gi|158321097|ref|YP_001513604.1| spore cortex-lytic enzyme SleB [Alkaliphilus oremlandii OhILAs]
 gi|158141296|gb|ABW19608.1| Spore cortex-lytic enzyme SleB [Alkaliphilus oremlandii OhILAs]
          Length = 228

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+S   V+  + RL   G L+   G+   F      AV  FQ  +GL P G++ +
Sbjct: 29  QTLAWGSSGEDVRIAQSRLKQWGYLEG--GVDGVFGKTTYDAVIKFQKANGLTPDGVIGA 86

Query: 160 STLEAMNVP 168
            T  A+ + 
Sbjct: 87  QTRVALGMS 95


>gi|167589013|ref|ZP_02381401.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           ubonensis Bu]
          Length = 277

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 3/93 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++   LG+    V  L+ RLI +G    +  ++  +DA  E+AV   Q + GL   G+  
Sbjct: 1   MKTRRLGDHGDDVGLLQRRLIRAGY---AVQVTHIYDAATEAAVIALQRKTGLVDDGVAG 57

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             T  A+             +L R  + L   +
Sbjct: 58  PKTYAALATGQRDPQHLALADLERAARTLGVPL 90


>gi|330945267|gb|EGH46923.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 272

 Score = 62.9 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|209696096|ref|YP_002264026.1| general secretion pathway protein A [Aliivibrio salmonicida
           LFI1238]
 gi|208010049|emb|CAQ80372.1| general secretion pathway protein A [Aliivibrio salmonicida
           LFI1238]
          Length = 519

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +  R + LG+   ++  L + L  +  L+     S  F    E  VK FQ   GL   
Sbjct: 436 PIMTKRAMRLGDEGEAIVELNQLLSFA--LEQPLTDSNRFTEETEEQVKQFQAIFGLKTD 493

Query: 155 GMVDSSTLEAM------NVP 168
           G+V SSTL  +      NVP
Sbjct: 494 GVVGSSTLMWLDSVINTNVP 513


>gi|304404834|ref|ZP_07386495.1| spore cortex-lytic enzyme [Paenibacillus curdlanolyticus YK9]
 gi|304346641|gb|EFM12474.1| spore cortex-lytic enzyme [Paenibacillus curdlanolyticus YK9]
          Length = 217

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  SV V  L+ RL + G   P++ ++  +    + AV+ FQ  +GL   G+  S T
Sbjct: 33  LRYGYQSVDVPDLQFRLKVLGYFKPAQ-VTTYYGMMTQDAVERFQSDYGLPADGVAGSKT 91

Query: 162 LEAM 165
              +
Sbjct: 92  WSLL 95


>gi|319647510|ref|ZP_08001730.1| N-acetylmuramoyl-L-alanine amidase cwlL [Bacillus sp. BT1B_CT2]
 gi|317390358|gb|EFV71165.1| N-acetylmuramoyl-L-alanine amidase cwlL [Bacillus sp. BT1B_CT2]
          Length = 224

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+S   V+ L++RLI +G   P  G   ++      AVK  Q + G+   G+   +T
Sbjct: 60  LKKGSSGSQVKALQKRLIAAGFSLPKYGADGSYGNETVQAVKALQKKAGIAVDGIYGPAT 119

Query: 162 LEAM 165
            +A+
Sbjct: 120 EKAL 123



 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 104 LGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                 +V++++E L            + G+   +     +AVK FQM HGL   G+   
Sbjct: 154 PLMKGTAVRQVQEALAALYFYPDKGAKNNGIDGYYGPKTANAVKRFQMMHGLSADGIYGP 213

Query: 160 STLEAM 165
            T   +
Sbjct: 214 KTKAKL 219


>gi|312109409|ref|YP_003987725.1| NLP/P60 protein [Geobacillus sp. Y4.1MC1]
 gi|311214510|gb|ADP73114.1| NLP/P60 protein [Geobacillus sp. Y4.1MC1]
          Length = 452

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 13/126 (10%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           +T+A+  +A+A      S+   P+  IR L +G++   V++++ +L   G    S+ ++ 
Sbjct: 240 QTLAKINEAVA-----GSKTPAPKAAIR-LTIGSTGPEVKKVQTKLKQLGYFTHSE-ITG 292

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTL-EAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
            + +    AVK FQ   G+  +G+VD+ T    M      ++  + +          + +
Sbjct: 293 YYGSITAEAVKQFQKSAGIKATGVVDAETYERLMGQAPQKKLDAIALVAD-----AAELL 347

Query: 192 GLRYVL 197
           G  YV 
Sbjct: 348 GKPYVW 353



 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 48/110 (43%), Gaps = 15/110 (13%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++   T A+ ++A A                  + +G+    V+ L++ L   G      
Sbjct: 83  VVDDATYAKLKEAAAR-------------RTAEMKIGSRGNDVKVLQQNLKQLGYFK-YP 128

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQ 177
            ++  +    + AVK FQ  +GL  +G+ D+ T++++ N  ++ R  ++ 
Sbjct: 129 EITGYYGTITQDAVKRFQQNYGLPVTGIADARTVQSIQNEVMNRRPAKIA 178



 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V +L++ L   G       ++  +      AV+ FQ R+ L  +G  DS T
Sbjct: 183 LAIGSQGAEVSKLQQNLKQLGYFT-YPKITGYYGTVTADAVRQFQKRYSLPATGKADSQT 241

Query: 162 LEAMN 166
           L  +N
Sbjct: 242 LAKIN 246



 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G S+  V+ L++ L   G           F    E AVK FQ    L  +G+VD +T 
Sbjct: 31  KVGMSAPQVKELQQLLKEKGFFTYPAATG-YFGTITEQAVKAFQASVRLPVTGVVDDATY 89

Query: 163 EAMNVPVDLRIRQLQV 178
             +      R  ++++
Sbjct: 90  AKLKEAAARRTAEMKI 105


>gi|313893120|ref|ZP_07826697.1| NlpC/P60 family protein [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442473|gb|EFR60888.1| NlpC/P60 family protein [Veillonella sp. oral taxon 158 str. F0412]
          Length = 270

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+   SV  ++++LI  G    +   +  +    + AV+LFQ   GL   G+
Sbjct: 25  VGATTLQYGDKGKSVTAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDGI 82

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNL 180
           V  +T  A+          L  N 
Sbjct: 83  VGPATYNALMGAPRSTKAVLTQNA 106


>gi|282850480|ref|ZP_06259859.1| NlpC/P60 family protein [Veillonella parvula ATCC 17745]
 gi|294792103|ref|ZP_06757251.1| endopeptidase, cell wall lytic activity [Veillonella sp. 6_1_27]
 gi|282579973|gb|EFB85377.1| NlpC/P60 family protein [Veillonella parvula ATCC 17745]
 gi|294457333|gb|EFG25695.1| endopeptidase, cell wall lytic activity [Veillonella sp. 6_1_27]
          Length = 270

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+   SV  ++++LI  G    +   +  +    + AV+LFQ   GL   G+
Sbjct: 25  VGATTLQYGDKGKSVTAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDGI 82

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNL 180
           V  +T  A+          L  N 
Sbjct: 83  VGPATYNALMGAPRSTKAVLTQNA 106


>gi|269798242|ref|YP_003312142.1| NLP/P60 protein [Veillonella parvula DSM 2008]
 gi|294793974|ref|ZP_06759111.1| protein P60 [Veillonella sp. 3_1_44]
 gi|269094871|gb|ACZ24862.1| NLP/P60 protein [Veillonella parvula DSM 2008]
 gi|294455544|gb|EFG23916.1| protein P60 [Veillonella sp. 3_1_44]
          Length = 270

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+   SV  ++++LI  G    +   +  +    + AV+LFQ   GL   G+
Sbjct: 25  VGATTLQYGDKGKSVTAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDGI 82

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNL 180
           V  +T  A+          L  N 
Sbjct: 83  VGPATYNALMGAPRSTKAVLTQNA 106


>gi|118443217|ref|YP_877472.1| spore-cortex-lytic enzyme precursor [Clostridium novyi NT]
 gi|118133673|gb|ABK60717.1| spore-cortex-lytic enzyme precursor [Clostridium novyi NT]
          Length = 241

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 81  AIAFYQDILSR--GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            +  Y  I  +    +  +       G+ +  V  ++ RL      + +      ++ Y+
Sbjct: 17  MLFSYASIPQQVIPYFNSMKTSVYKYGSKNNIVTEIQRRLKAWDYYEGALDGKYGYETYL 76

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             AVK FQ ++GL   G+V  STL A+ +
Sbjct: 77  --AVKDFQRKNGLTVDGIVGDSTLSALGI 103


>gi|312877867|ref|ZP_07737814.1| spore cortex-lytic enzyme [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795371|gb|EFR11753.1| spore cortex-lytic enzyme [Caldicellulosiruptor lactoaceticus 6A]
          Length = 225

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G++   V  +++RL   G  D        +  Y+  AV+ FQ ++GL   G+  S TL 
Sbjct: 40  YGSTGPEVIEIQKRLKQWGYYDGPIDGIYGYKTYM--AVRYFQAKNGLKVDGIAGSETLR 97

Query: 164 AMNVPVDLR 172
           A+ +    R
Sbjct: 98  ALGIVTTTR 106


>gi|153836106|ref|ZP_01988773.1| ErfK/YbiS/YcfS/YnhG [Vibrio parahaemolyticus AQ3810]
 gi|260901112|ref|ZP_05909507.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ4037]
 gi|149750860|gb|EDM61605.1| ErfK/YbiS/YcfS/YnhG [Vibrio parahaemolyticus AQ3810]
 gi|308109403|gb|EFO46943.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ4037]
          Length = 308

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 40/161 (24%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            ++  + +++N+    L     G+ V     V +GR+ R TP++ + I++   NP W  P
Sbjct: 97  PEVPHQGIVINLAELRLYYFPEGEDVVHVFPVGIGRIGRDTPVMTTSISQKRPNPTWTPP 156

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + +                      + K V +  V                G  N 
Sbjct: 157 ASI-RAEY---------------------RAKGVDLPAVV-------------PAGPDNP 181

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
           +    +     N  Y +H T +   F   +R  ++GC+R+ 
Sbjct: 182 LGLFALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRMD 219


>gi|295400954|ref|ZP_06810929.1| NLP/P60 protein [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976956|gb|EFG52559.1| NLP/P60 protein [Geobacillus thermoglucosidasius C56-YS93]
          Length = 452

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 13/126 (10%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           +T+A+  +A+A      S+   P+  IR L +G++   V++++ +L   G    S+ ++ 
Sbjct: 240 QTLAKINEAVA-----GSKTPAPKAAIR-LTIGSTGPEVKKVQTKLKQLGYFTHSE-ITG 292

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTL-EAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
            + +    AVK FQ   G+  +G+VD+ T    M      ++  + +          + +
Sbjct: 293 YYGSITAEAVKQFQKSAGIKATGVVDAETYERLMGQAPQKKLDAIALVAD-----AAELL 347

Query: 192 GLRYVL 197
           G  YV 
Sbjct: 348 GKPYVW 353



 Score = 59.8 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 15/110 (13%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++   T A+ ++A A                  + +G+    V+ L++ L   G      
Sbjct: 83  VVDDATYAKLKEAAAR-------------RTAEMKIGSRGNDVKVLQQNLKQLGYFK-YP 128

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQ 177
            ++  +    + AVK FQ  +GL  +G+ D+ T++++ N  ++ R  Q+ 
Sbjct: 129 EITGYYGTITQDAVKRFQQNYGLPVTGIADARTVQSIQNEVMNRRPAQIA 178



 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V +L++ L   G       ++  +      AV+ FQ R+ L  +G  DS T
Sbjct: 183 LAIGSQGAEVSKLQQNLKQLGYFT-YPKITGYYGTVTADAVRQFQKRYSLPATGKADSQT 241

Query: 162 LEAMN 166
           L  +N
Sbjct: 242 LAKIN 246



 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G S+  V+ L++ L   G           F    E AVK FQ    L  +G+VD +T 
Sbjct: 31  KVGMSAPQVKELQQLLKEKGFFTYPAATG-YFGTITEQAVKAFQASVRLPVTGVVDDATY 89

Query: 163 EAMNVPVDLRIRQLQV 178
             +      R  ++++
Sbjct: 90  AKLKEAAARRTAEMKI 105


>gi|294498419|ref|YP_003562119.1| endopeptidase LytF [Bacillus megaterium QM B1551]
 gi|294348356|gb|ADE68685.1| endopeptidase LytF (cell wall hydrolase) [Bacillus megaterium QM
           B1551]
          Length = 303

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           YQ ++            L  G +S  V+++++ L   G  + +   +  F    ++AV  
Sbjct: 88  YQALIGNSTSTVTNGTLLKYGMTSNEVEKVQQLLKDKGYFNATP--TGYFGTVTQTAVMN 145

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           FQ  HGL   G+V  +TL A+
Sbjct: 146 FQRDHGLAVDGIVGPATLNAL 166



 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G +   V+ L++ L   G    S   +  F +  + +V  FQ  H L   G
Sbjct: 24  ALGDKLLKEGMTDPDVKELQDVLRQKG--IFSATSTGYFGSITKDSVLSFQRSHSLTADG 81

Query: 156 MVDSSTLEAM 165
           +V S+T +A+
Sbjct: 82  IVGSNTYQAL 91


>gi|225175303|ref|ZP_03729298.1| carboxyl-terminal protease [Dethiobacter alkaliphilus AHT 1]
 gi|225169055|gb|EEG77854.1| carboxyl-terminal protease [Dethiobacter alkaliphilus AHT 1]
          Length = 469

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G+  ++VQ L++ L     LD +   +  +D+  E AV+ FQ  HGL+ +G ++
Sbjct: 380 ARDLKPGDEDMNVQFLQQMLKS---LDYNVNDTGVYDSATERAVRSFQNEHGLNATGELN 436

Query: 159 SSTLEAMNVPVDLRIRQLQVN 179
             T   +N   +   R L+ N
Sbjct: 437 LETRTQLN---EEIDRLLEEN 454


>gi|219670721|ref|YP_002461156.1| peptidoglycan-binding protein [Desulfitobacterium hafniense DCB-2]
 gi|219540981|gb|ACL22720.1| Peptidoglycan-binding domain 1 protein [Desulfitobacterium
           hafniense DCB-2]
          Length = 433

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R L  G+    V  ++ RL   G +     +   F    E+AV  FQ   GL+P G+V 
Sbjct: 1   MRMLRRGSRGNDVAEVQVRLSELGYIPG--PIDGIFGPKTEAAVIRFQKDRGLNPDGIVG 58

Query: 159 SSTLEAM 165
             T +A+
Sbjct: 59  PLTYQAL 65


>gi|328469263|gb|EGF40209.1| hypothetical protein VP10329_10281 [Vibrio parahaemolyticus 10329]
          Length = 308

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 40/161 (24%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            ++  + +++N+    L     G+ V     V +GR+ R TP++ + I++   NP W  P
Sbjct: 97  PEVPHQGIVINLAELRLYYFPEGEDVVHVFPVGIGRIGRDTPVMTTSISQKRPNPTWTPP 156

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI  +                       KG  V +  V                G  N 
Sbjct: 157 ASIRAE--------------------YRAKG--VDLPAVV-------------PAGPDNP 181

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
           +    +     N  Y +H T +   F   +R  ++GC+R+ 
Sbjct: 182 LGLFALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRMD 219


>gi|75911176|ref|YP_325472.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75704901|gb|ABA24577.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 128

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+S  +V  L+  L   G       +   F A  ++AV  FQ  +GL   G+V S T
Sbjct: 17  LRQGDSGAAVTELQRLLNAKG---VKVSVDGIFGAGTQAAVVKFQRANGLTADGIVGSKT 73

Query: 162 LEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
             A+       +R+  + +N     +   Q   L ++   IPAA+L
Sbjct: 74  WVALRKVPTPTIRLVDVALNYD-PTQFPHQVSALEWLQSQIPAATL 118


>gi|289673230|ref|ZP_06494120.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           syringae FF5]
          Length = 311

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 79  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 137

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 138 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 162

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 163 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 213


>gi|89897594|ref|YP_521081.1| hypothetical protein DSY4848 [Desulfitobacterium hafniense Y51]
 gi|89337042|dbj|BAE86637.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 433

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R L  G+    V  ++ RL   G +     +   F    E+AV  FQ   GL+P G+V 
Sbjct: 1   MRMLRRGSRGNDVAEVQVRLSELGYIPG--PIDGIFGPKTEAAVIRFQKDRGLNPDGIVG 58

Query: 159 SSTLEAM 165
             T +A+
Sbjct: 59  PLTYQAL 65


>gi|28901325|ref|NP_800980.1| hypothetical protein VPA1470 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362882|ref|ZP_05775751.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus K5030]
 gi|260880170|ref|ZP_05892525.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
           AN-5034]
 gi|260895287|ref|ZP_05903783.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
           Peru-466]
 gi|28809872|dbj|BAC62813.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085792|gb|EFO35487.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308092500|gb|EFO42195.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
           AN-5034]
 gi|308111963|gb|EFO49503.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus K5030]
          Length = 308

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 40/161 (24%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            ++  + +++N+    L     G+ V     V +GR+ R TP++ + I++   NP W  P
Sbjct: 97  PEVPHQGIVINLAELRLYYFPEGEDVVHVFPVGIGRIGRDTPVMTTSISQKRPNPTWTPP 156

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI  +                       KG  V +  V                G  N 
Sbjct: 157 ASIRAE--------------------YRAKG--VDLPAVV-------------PAGPDNP 181

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
           +    +     N  Y +H T +   F   +R  ++GC+R+ 
Sbjct: 182 LGLFALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRMD 219


>gi|163800189|ref|ZP_02194090.1| hypothetical protein 1103602000595_AND4_05899 [Vibrio sp. AND4]
 gi|159175632|gb|EDP60426.1| hypothetical protein AND4_05899 [Vibrio sp. AND4]
          Length = 308

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 42/182 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +  + +++N+    L        V     V +GR+ R TP + + I++   NP W  P
Sbjct: 97  PDVPHKGIVINLAELRLYYFPPKQNVVHIFPVGIGRIGRDTPEMTTSISQKRPNPTWTPP 156

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + +  A     P  +                                    G  N 
Sbjct: 157 SSI-RAEYKAKGIDLPAVV----------------------------------PAGPDNP 181

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           +    +     +  Y +H T +   F   +R  +SGC+R+ +  D+  WL        + 
Sbjct: 182 LGMFALRLAYGHGEYLIHGTNKD--FGIGMR-VSSGCIRM-DPSDI-EWLFDKVRRGEKV 236

Query: 367 HI 368
            I
Sbjct: 237 KI 238


>gi|323494305|ref|ZP_08099417.1| hypothetical protein VIBR0546_07107 [Vibrio brasiliensis LMG 20546]
 gi|323311468|gb|EGA64620.1| hypothetical protein VIBR0546_07107 [Vibrio brasiliensis LMG 20546]
          Length = 301

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 66/197 (33%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L   E          V +GRV R TP + ++I++   NP W  P SI +K+
Sbjct: 93  IVINLAELRLYYFEPEINKVHIFPVGIGRVGRDTPEMVTKISQKRPNPTWTPPASI-RKE 151

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +A   + P  +                                    G  N +    + 
Sbjct: 152 YLAKGIELPAVV----------------------------------PAGPENPLGEYALR 177

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                  Y +H T +   F   +R  +SGC+R+ +  D+  WL        +  +     
Sbjct: 178 LAHGAGDYLIHGTNKD--FGIGLR-VSSGCIRM-DPKDI-EWLFPQVKLGEQVRV----- 227

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 228 INEPIKVALEPDRSVFL 244


>gi|297194627|ref|ZP_06912025.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|297152365|gb|EFH31700.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 200

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 95  PELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P+ P    L  G+S  +V  L++RL+    L P       FD  VE AVK++Q   G+  
Sbjct: 121 PDKPAGGTLRRGDSGAAVVDLQQRLMQL-WLYPYDEADGRFDEDVEQAVKVYQWDRGIQG 179

Query: 154 S--GMVDSSTLEAM 165
              G+    T  A+
Sbjct: 180 DPLGVYGPHTRRAL 193


>gi|258510344|ref|YP_003183778.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477070|gb|ACV57389.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 792

 Score = 62.5 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V  L+  L   G        +  FDA  E+ VK FQ   GL   G+V   T
Sbjct: 57  LSYGSTGAYVAILQNALNALGY--DVGQATGVFDATTEAQVKAFQQAEGLGVDGIVGPMT 114

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
             A+   V    RQ+   L R   L++     R V  
Sbjct: 115 WGALAKAVADY-RQVMTVLTRPSSLVQHVEWKRIVWN 150


>gi|28869470|ref|NP_792089.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28852712|gb|AAO55784.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 321

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPNVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|20090011|ref|NP_616086.1| hypothetical protein MA1145 [Methanosarcina acetivorans C2A]
 gi|19914978|gb|AAM04566.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
           C2A]
          Length = 320

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 35/66 (53%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S  +V++++E LII G   P  G    F    E AV+ +Q   GL   G++ +
Sbjct: 28  RVLGRGDSGPAVKKVQEALIILGIPVPKVGADGVFGGETELAVRSYQEARGLKVDGIIGA 87

Query: 160 STLEAM 165
            T+ ++
Sbjct: 88  ETIGSL 93


>gi|213968114|ref|ZP_03396259.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           T1]
 gi|301384911|ref|ZP_07233329.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062889|ref|ZP_07254430.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           K40]
 gi|302135226|ref|ZP_07261216.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213927094|gb|EEB60644.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           T1]
 gi|330875585|gb|EGH09734.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330968354|gb|EGH68614.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 321

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPNVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|71734528|ref|YP_274260.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289629142|ref|ZP_06462096.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|298486557|ref|ZP_07004617.1| L,D-transpeptidase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|71555081|gb|AAZ34292.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298159034|gb|EFI00095.1| L,D-transpeptidase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320324946|gb|EFW81018.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329100|gb|EFW85098.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330867505|gb|EGH02214.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|331010595|gb|EGH90651.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 321

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|330951750|gb|EGH52010.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae Cit 7]
          Length = 321

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|170760217|ref|YP_001786763.1| zinc carboxypeptidase family protein [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169407206|gb|ACA55617.1| zinc carboxypeptidase family protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 423

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E AVK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--DVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LEAMN 166
            E +N
Sbjct: 62  YELLN 66


>gi|188993784|ref|YP_001905794.1| peptidoglycan-binding protein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167735544|emb|CAP53759.1| peptidoglycan-binding protein [Xanthomonas campestris pv.
           campestris]
          Length = 616

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 19/171 (11%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS--------DIPIISKETIA 76
           +L+ K           +    + V ++++N  ++    +D         D    S+ +  
Sbjct: 224 ALLAKADQIHATHRYYDGPKAANVAEKYENAYSQNQAALDRAHTKVSGRDFDPSSERSDP 283

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVA 133
             +KA+       SR          L  G+SS  V++L   L   G    +         
Sbjct: 284 DVQKALELVHASPSR---QASAGHLLKEGSSSREVRKLESNLSALGYTASNGDAFQMDQK 340

Query: 134 FDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           FDA  + AV+ FQ  +GL    G    +TL A+    D + R LQ NL+ +
Sbjct: 341 FDASTKQAVEAFQHANGLTTVDGKAGPATLRAI----DQQARSLQSNLIEL 387



 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 11/152 (7%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVD-MGIDSDIPIISKETIAQTEKAIAFYQ 86
             P   +    ++ E   S    + ++ L+ +     + D   + ++  A T++A+  +Q
Sbjct: 294 ASPSRQASAGHLLKEGSSSREVRKLESNLSALGYTASNGDAFQMDQKFDASTKQAVEAFQ 353

Query: 87  DILSRGGWPELP--IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV----ES 140
                 G   +     P  L       + L+  LI  G    +    ++ D Y+      
Sbjct: 354 ---HANGLTTVDGKAGPATLRAIDQQARSLQSNLIELGF-TGTDNKPLSVDGYLGNGTRQ 409

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           AV  FQ  +GL  +G+ D  TL+++      R
Sbjct: 410 AVIAFQEANGLPATGVADKGTLDSLAQQAAQR 441


>gi|70731627|ref|YP_261368.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas fluorescens Pf-5]
 gi|68345926|gb|AAY93532.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas fluorescens Pf-5]
          Length = 330

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 45/177 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    L     G+ V     + +GR    +PI H+ I     NP
Sbjct: 95  RFILPPGPREG-IVINLAEYRLYYYPKGRNVVYTFPLGIGREGWGSPIAHTSITAKTPNP 153

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 154 TWTPPASIKAE-----------------------------------HAADGDPLPNVVPA 178

Query: 303 GKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
           G  N +   K    +       H + +   F   +R  + GC R+   N++++   +
Sbjct: 179 GPDNPLGPFKFTLGTPGYLI--HGSNKK--FGIGMRT-SHGCFRMLNNNVLEMAGMV 230


>gi|330888225|gb|EGH20886.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 321

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|257486299|ref|ZP_05640340.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 319

 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 87  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 145

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 146 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 170

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 171 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 221


>gi|320528988|ref|ZP_08030080.1| NlpC/P60 family protein [Selenomonas artemidis F0399]
 gi|320138618|gb|EFW30508.1| NlpC/P60 family protein [Selenomonas artemidis F0399]
          Length = 229

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
                 +G+    V  ++ +L   G    + G    F      AVK FQ  HGL   GMV
Sbjct: 31  SAESFQIGDQGTDVAEIQGQLSSVGYDVVADGD---FGPATAEAVKEFQAAHGLAVDGMV 87

Query: 158 DSSTLEAM 165
             ST EA+
Sbjct: 88  GPSTYEAL 95


>gi|313895511|ref|ZP_07829067.1| NlpC/P60 family protein [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975637|gb|EFR41096.1| NlpC/P60 family protein [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 220

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
                 +G+    V  ++ +L   G    + G    F      AVK FQ  HGL   GMV
Sbjct: 22  SAESFQIGDQGTDVAEIQGQLSSVGYDVVADGD---FGPATAEAVKEFQAAHGLAVDGMV 78

Query: 158 DSSTLEAM 165
             ST EA+
Sbjct: 79  GPSTYEAL 86


>gi|330977562|gb|EGH77506.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 321

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 44/164 (26%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI  + 
Sbjct: 100 IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASIKAE- 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++ +          G  N +   K  
Sbjct: 159 ----------------------------------HAADGDPLPDVVPAGPDNPLGPFKFG 184

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
                + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 185 L--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|303238362|ref|ZP_07324897.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
           CD2]
 gi|302594066|gb|EFL63779.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
           CD2]
          Length = 362

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L  G S   V +L+  L   G L  S   +  + +  ++AVK  Q ++GLD  G+   
Sbjct: 114 GALKEGMSGSRVTQLQSDLKKLGYLSASP--TGYYGSLTKAAVKKLQKKNGLDQDGVAGD 171

Query: 160 STLEAMN 166
           +TL  +N
Sbjct: 172 ATLTKIN 178



 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G S   V  L++ L   G L  S   +  + +  +SAV+  Q  +GLD  G+  
Sbjct: 31  SKVLKEGMSGSDVTSLQKDLRTLGYLKVSP--TGYYGSLTKSAVERLQDSNGLDGDGIAG 88

Query: 159 SSTLE 163
           S T+ 
Sbjct: 89  SKTIS 93


>gi|238018984|ref|ZP_04599410.1| hypothetical protein VEIDISOL_00846 [Veillonella dispar ATCC 17748]
 gi|237864468|gb|EEP65758.1| hypothetical protein VEIDISOL_00846 [Veillonella dispar ATCC 17748]
          Length = 269

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+   SV  ++++LI  G    +   +  +    + AV+LFQ   GL   G+
Sbjct: 25  VGATTLQYGDKGKSVTAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDGI 82

Query: 157 VDSSTLEAM 165
           V  +T  A+
Sbjct: 83  VGPATYNAL 91


>gi|226536686|gb|ACO72580.1| hypothetical cell wall lytic activity protein [Geobacillus
           stearothermophilus]
          Length = 450

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 13/141 (9%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD--------I 88
           D    E    + +        R+        P  +    A TEKA+  +Q         I
Sbjct: 22  DSQAAEWKKGMSSPEIKQLQQRLKEKGFFTYPQATGYFGAITEKAVKAFQRAMNLPATGI 81

Query: 89  LSRGGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           +    + +L        L +G+   +V  L+ RL   G       ++  + A    AVK 
Sbjct: 82  VDDATYAKLKKPASNDTLAIGSRGAAVSDLQRRLKQLGYF-RYPQITGYYGAVTADAVKQ 140

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           FQ  +GL  +G  D +TLE +
Sbjct: 141 FQRANGLPATGRADRATLERL 161



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G SS  +++L++RL   G     +     F A  E AVK FQ    L  +G+VD +T 
Sbjct: 29  KKGMSSPEIKQLQQRLKEKGFFTYPQATG-YFGAITEKAVKAFQRAMNLPATGIVDDATY 87

Query: 163 EAMNVPVD 170
             +  P  
Sbjct: 88  AKLKKPAS 95



 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V++L+++L   G    S  ++  +      A++ FQ  +GL  +G VD+ T
Sbjct: 176 LTIGSRGDDVRKLQQQLKQLGYFTYSD-ITGYYGVLTADAIRRFQRDNGLPVTGAVDNQT 234

Query: 162 LEAM 165
           +  +
Sbjct: 235 VARL 238



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V+R++ +L   G       ++  +      AV+ FQ    L  +G+VD  T
Sbjct: 261 LSIGALGDDVKRIQTKLKELGYF--WTDITGYYGTATADAVRRFQQAAQLPATGIVDGET 318

Query: 162 LEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
            E +       ++  +++          + +G  YV 
Sbjct: 319 YERLIGQAPAAKLDVIELVAD-----AAELLGTPYVW 350


>gi|290955397|ref|YP_003486579.1| hypothetical protein SCAB_8241 [Streptomyces scabiei 87.22]
 gi|260644923|emb|CBG68009.1| putative membrane protein [Streptomyces scabiei 87.22]
          Length = 265

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GM 156
              L  G+S   V  L++RL+   D+      S  +D  ++ AV  FQ+ +G+     G+
Sbjct: 191 AGTLREGDSGPQVSELQQRLLRIPDVYAGGSTSGRYDGVLKDAVARFQLWYGIRGDETGV 250

Query: 157 VDSSTLEAM 165
             + T + +
Sbjct: 251 YGNDTRQDL 259


>gi|284053377|ref|ZP_06383587.1| peptidoglycan binding domain-containing protein [Arthrospira
           platensis str. Paraca]
          Length = 492

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V +++ RL   G L  S   +  F    ++AV  FQ  + L   G+V  +T
Sbjct: 53  LAIGDFGPEVTQIQNRLRELGYL--SANATGYFGEETQNAVIQFQRDNRLVQDGIVGPNT 110

Query: 162 LEAM 165
           + A+
Sbjct: 111 VVAL 114



 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  ++  L   G       ++  +D     AV+ FQM +GL P+G +  +
Sbjct: 212 SLGPGSFGPIVGLVQRELQRLGFFPGQ--ITNFYDEVTFQAVRNFQMVNGLTPTGFIGPT 269

Query: 161 TLEAM 165
           T   +
Sbjct: 270 TQSLL 274



 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L LG+    V  L++RL   G       +   F      AV  FQ  + +  +G V
Sbjct: 299 PSSILVLGSRGSDVIALQQRLQQLGYYTGM--IDGVFGESTRVAVVRFQRDNAITQTGQV 356

Query: 158 DSSTLEAMNVPVDLR 172
             +T   +      R
Sbjct: 357 GPTTQFHLARATTQR 371



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+S   V  L+ RL   G  +     +  F     +AV  FQ  + +  +G+V   T
Sbjct: 139 LGLGDSGPGVTNLQNRLRNLGFFN--NNSTGYFGPITRNAVIRFQQANSIAATGLVTEDT 196

Query: 162 LEAMNV 167
           L  +N 
Sbjct: 197 LAILNR 202



 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 17/89 (19%)

Query: 95  PELPIRP--------------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           P +P  P              + +GN+   V+R++ RL   G  +    ++  FD   ++
Sbjct: 375 PVVPAGPGSVVRPVATNPNTYITIGNAGEDVRRIQRRLRELGFYNG--PINGFFDGQTQN 432

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAM-NVP 168
           AV  FQ  + +  +G+V  +T   + NV 
Sbjct: 433 AVIQFQQAYNITTTGIVGPTTETYLFNVT 461


>gi|261365343|ref|ZP_05978226.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa ATCC 25996]
 gi|288566283|gb|EFC87843.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa ATCC 25996]
          Length = 332

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 67/192 (34%), Gaps = 44/192 (22%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NIP   L    +G++     V VG+   QT +   +I    FNP W IP+SI ++
Sbjct: 33  QHVVINIPQQRLFLYTDGQLTKIYPVAVGKAMTQTNLGEHKIGAKAFNPTWHIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                 R D                    V+ V      P   +F +      ++     
Sbjct: 93  ------RGDG-------------------VKSVPPGPNNPLGPVFVRLGDPKFSLG---- 123

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHIEEV 371
                    +H T  P    +V    + GCVR+++    +    +    P    Y +   
Sbjct: 124 ---------IHGTNAP---ASVPGVRSHGCVRMKSPDALEFAKTIATGAPASVIYQLAS- 170

Query: 372 VKTRKTTPVKLA 383
           +       + LA
Sbjct: 171 LNEDANKNLWLA 182


>gi|330973775|gb|EGH73841.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 321

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|302189952|ref|ZP_07266625.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae 642]
          Length = 321

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|291566493|dbj|BAI88765.1| peptidoglycan binding domain protein [Arthrospira platensis
           NIES-39]
          Length = 492

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V +++ RL   G L  S   +  F    ++AV  FQ  + L   G+V  +T
Sbjct: 53  LAIGDFGPEVTQIQNRLRELGYL--SANATGYFGEETQNAVIQFQRDNRLVQDGIVGPNT 110

Query: 162 LEAM 165
           + A+
Sbjct: 111 VVAL 114



 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 2/75 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L LG+    V  L++RL   G       +   FD     AV  FQ  +G+  +G V
Sbjct: 299 PSSILVLGSRGADVIALQQRLQQLGYYTGM--IDGVFDESTRVAVVRFQRDNGITQTGQV 356

Query: 158 DSSTLEAMNVPVDLR 172
             +T   +      R
Sbjct: 357 GPTTQFHLARATTQR 371



 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  ++  L   G       ++  +D     AV+ FQM +GL P+G +  +
Sbjct: 212 SLGPGSFGPIVGLVQRELQRLGFFPGQ--ITNFYDEVTFQAVRNFQMVNGLTPTGFIGPT 269

Query: 161 TLEAM 165
           T   +
Sbjct: 270 TQSLL 274



 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+S   V  L+ RL   G  +     +  F     +AV  FQ  + +  +G+V   T
Sbjct: 139 LGLGDSGPGVTNLQNRLRNLGFFN--NNSTGYFGPITRNAVIRFQQANSIAATGLVTEDT 196

Query: 162 LEAMNV 167
           L  +N 
Sbjct: 197 LAILNR 202



 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 17/89 (19%)

Query: 95  PELPIRP--------------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           P +P  P              + +GN+   V+R++ RL   G  +    ++  FD   ++
Sbjct: 375 PVVPAGPGSVVRPVVTNPNTYITIGNAGEDVRRIQRRLRELGFYNG--PINGFFDGQTQN 432

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAM-NVP 168
           AV  FQ  + +  +G+V  +T   + NV 
Sbjct: 433 AVIQFQQAYNITTTGIVGPTTETYLFNVT 461


>gi|229824253|ref|ZP_04450322.1| hypothetical protein GCWU000282_01557 [Catonella morbi ATCC 51271]
 gi|229786607|gb|EEP22721.1| hypothetical protein GCWU000282_01557 [Catonella morbi ATCC 51271]
          Length = 474

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G S+  V+ L   L   G        +  FD  +E+AVK FQ   GL   G V   
Sbjct: 385 TLAKGQSNDGVKNLALILKALGY---ELESTEYFDDKMEAAVKAFQKDKGLTEDGQVTGK 441

Query: 161 TLEAMNVPVDLRIR 174
           T +A+N      ++
Sbjct: 442 TADALNEATREYLK 455


>gi|153939521|ref|YP_001390735.1| zinc carboxypeptidase family protein [Clostridium botulinum F str.
           Langeland]
 gi|152935417|gb|ABS40915.1| zinc carboxypeptidase family protein [Clostridium botulinum F str.
           Langeland]
 gi|295318808|gb|ADF99185.1| zinc carboxypeptidase family protein [Clostridium botulinum F str.
           230613]
          Length = 423

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E AVK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--DVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LEAMN 166
            E +N
Sbjct: 62  YELLN 66


>gi|21229926|ref|NP_635843.1| lytic enzyme [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|188989879|ref|YP_001901889.1| putative lytic enzyme [Xanthomonas campestris pv. campestris str.
           B100]
 gi|21111435|gb|AAM39767.1| lytic enzyme [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|167731639|emb|CAP49817.1| putative lytic enzyme [Xanthomonas campestris pv. campestris]
          Length = 576

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 90  SRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKL 144
           +R   P  P     L  G  S  V +L++ L   G  D           F      AV  
Sbjct: 366 ARQSQPSAPAGNGTLRHGEQSGDVGKLQQDLNRLGVRDAQGNRLAEDGRFGDNTREAVIA 425

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           FQ +HGL P G+V  +T  A++        Q
Sbjct: 426 FQKQHGLQPDGVVGRNTQAALSTQPAQTQSQ 456


>gi|257068140|ref|YP_003154395.1| cell wall-associated hydrolase, invasion-associated protein
           [Brachybacterium faecium DSM 4810]
 gi|256558958|gb|ACU84805.1| cell wall-associated hydrolase, invasion-associated protein
           [Brachybacterium faecium DSM 4810]
          Length = 280

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L  G+   +VQ L+  L   G       +   F     SAVK +Q   GL   G+V
Sbjct: 84  STQKLRWGSRGGAVQELQSALNDHG---AGLAVDGVFGPRTHSAVKSYQSSQGLQVDGVV 140

Query: 158 DSSTLEAMNV 167
              T  A+N 
Sbjct: 141 GPKTRAALNG 150


>gi|168180045|ref|ZP_02614709.1| zinc carboxypeptidase family protein [Clostridium botulinum NCTC
           2916]
 gi|226948652|ref|YP_002803743.1| zinc carboxypeptidase family protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|182669125|gb|EDT81101.1| zinc carboxypeptidase family protein [Clostridium botulinum NCTC
           2916]
 gi|226842575|gb|ACO85241.1| zinc carboxypeptidase family protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 423

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E AVK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--DVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LEAMN 166
            E +N
Sbjct: 62  YELLN 66


>gi|148379350|ref|YP_001253891.1| zinc carboxypeptidase family protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153930920|ref|YP_001383725.1| zinc carboxypeptidase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935817|ref|YP_001387274.1| zinc carboxypeptidase family protein [Clostridium botulinum A str.
           Hall]
 gi|148288834|emb|CAL82918.1| putative gamma-D-glutamyl-L-diamino acid endopeptidase [Clostridium
           botulinum A str. ATCC 3502]
 gi|152926964|gb|ABS32464.1| zinc carboxypeptidase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152931731|gb|ABS37230.1| zinc carboxypeptidase family protein [Clostridium botulinum A str.
           Hall]
 gi|322805689|emb|CBZ03254.1| gamma-D-glutamyl-L-diamino acid endopeptidase I [Clostridium
           botulinum H04402 065]
          Length = 423

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E AVK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--DVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LEAMN 166
            E +N
Sbjct: 62  YELLN 66


>gi|238765289|ref|ZP_04626217.1| hypothetical protein ykris0001_43380 [Yersinia kristensenii ATCC
           33638]
 gi|238696512|gb|EEP89301.1| hypothetical protein ykris0001_43380 [Yersinia kristensenii ATCC
           33638]
          Length = 355

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 71/208 (34%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+   +   + +G++ R TP + + +++ + NP W
Sbjct: 91  MLLPDTPREGIVINLAELRLYYYPKGQNKVVVYPIGIGQLGRNTPTMTTSVSQKIPNPTW 150

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL                         E          G 
Sbjct: 151 T-PTANIRK----------NYLA------------------------EGITLPSVVPAGP 175

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   + +  Y +H T     F   +R  +SGC+R+    D+   L K  P  
Sbjct: 176 ENPMGLFAMRLSAGSGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-EALFKSVPKG 230

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 231 TRVQIINEPVKYSVEPDGKRYVEVHQPL 258


>gi|66045310|ref|YP_235151.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a]
 gi|63256017|gb|AAY37113.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a]
          Length = 321

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|296392456|ref|YP_003657340.1| cell wall hydrolase/autolysin [Segniliparus rotundus DSM 44985]
 gi|296179603|gb|ADG96509.1| cell wall hydrolase/autolysin [Segniliparus rotundus DSM 44985]
          Length = 402

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 21/81 (25%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA---------------------FDAYVES 140
           L  G+    V  +R  L   G L  S G                         FDA ++ 
Sbjct: 4   LRRGDIGPEVVAVRAILEELGFLRSSNGSPDQGAAHDGLTPDASGQEARVEALFDAELDL 63

Query: 141 AVKLFQMRHGLDPSGMVDSST 161
           AV+ FQ   G+   G++  +T
Sbjct: 64  AVRAFQQHRGMLVDGIIGPAT 84



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V  L+ RL   G       +   F     + +  +Q   GL P G+   +TL ++
Sbjct: 108 MVGDDVADLQARLHDLGFY--MGLVDGYFGPKTHNGLMSYQREFGLTPDGICGPATLRSL 165

Query: 166 N 166
           N
Sbjct: 166 N 166


>gi|307945854|ref|ZP_07661190.1| putative bacteriophage-acquired protein [Roseibium sp. TrichSKD4]
 gi|307771727|gb|EFO30952.1| putative bacteriophage-acquired protein [Roseibium sp. TrichSKD4]
          Length = 407

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 12/106 (11%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLI 119
              ID    +I +E    T +++       +           L LG+    V+RL+ RL 
Sbjct: 189 PGQIDHYTRLIKREYSRLTRQSLTVRNKARAA---------SLRLGSEGEKVERLQLRLT 239

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               +    G    F    + AV  FQ  HGL P G+V   T +A+
Sbjct: 240 NLNYVLRVDGD---FGPATKRAVVAFQADHGLKPDGIVGQQTQDAL 282


>gi|262403202|ref|ZP_06079762.1| hypothetical protein VOA_001186 [Vibrio sp. RC586]
 gi|262350701|gb|EEY99834.1| hypothetical protein VOA_001186 [Vibrio sp. RC586]
          Length = 306

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 65/202 (32%), Gaps = 57/202 (28%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK- 253
           +++N+    L     N        V +GR+ R TP++ + I+    NP W  P S+ ++ 
Sbjct: 95  IVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISSKRKNPTWTPPESVRREH 154

Query: 254 ----DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
               D++  +                                           G  N + 
Sbjct: 155 KAKGDILPAVV----------------------------------------PAGPDNPLG 174

Query: 310 STKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              +     +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I
Sbjct: 175 DYAMRLAYGSGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPKDI-EWLFQQVERGEKVRI 229

Query: 369 EEVVKTRKTTPVKLATEVPVHF 390
                  +   V L  +  V  
Sbjct: 230 -----INEPIKVALEPDRSVFI 246


>gi|206558510|ref|YP_002229270.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           cenocepacia J2315]
 gi|198034547|emb|CAR50412.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           cenocepacia J2315]
          Length = 283

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 3/93 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++   LG+    V  L+ RLI +G    +  ++  +DA  E+AV   Q + GL   G+  
Sbjct: 1   MKTRRLGDHGDDVGLLQRRLIRAGY---AVQITHLYDAATEAAVIALQRKTGLVDDGIAG 57

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             T  A+   +         +L R  + L+  +
Sbjct: 58  PKTYAALATGLRDPKHLGLADLERAARTLDVPL 90


>gi|326390436|ref|ZP_08211994.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993554|gb|EGD51988.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 327

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+    V  L+ RL   G       +   F+   E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDKGPFVVNLQARLKSLGF--DPGPIDGIFERKTEEAVKAYQQSRGLPVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|229589220|ref|YP_002871339.1| hypothetical protein PFLU1701 [Pseudomonas fluorescens SBW25]
 gi|229361086|emb|CAY47949.1| conserved hypothetical exported protein [Pseudomonas fluorescens
           SBW25]
          Length = 321

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 51/177 (28%), Gaps = 45/177 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    L     G+ V     + +GR    +PI H+ I     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRLYYFPKGQNVVYTFPLGIGREGWGSPIAHTSIIAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++            
Sbjct: 148 TWTPPASIKAE-----------------------------------HAANGDPLPNVVPA 172

Query: 303 GKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
           G  N +   K    +       H +     F    R  + GC R+   N++++   +
Sbjct: 173 GPDNPLGPFKFTLGTPGYLI--HGSNMK--FGIGTRT-SHGCFRMFNNNVLEMAGMV 224


>gi|260775196|ref|ZP_05884094.1| general secretion pathway protein A [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608897|gb|EEX35059.1| general secretion pathway protein A [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 536

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
            Y  I  +G W     + L    S  ++  L +RL     L   +  S  +D  +   V+
Sbjct: 444 QYHQI-WQGYW----HQTLKPNMSGRAIAELDDRLSKV--LGEPERESDVYDQELMRKVE 496

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
           LFQ   GL   G+    TL+ +
Sbjct: 497 LFQQWQGLHVDGIAGRRTLQRL 518


>gi|325131741|gb|EGC54443.1| ErfK/YbiS/YcfS/YnhG family [Neisseria meningitidis M6190]
          Length = 207

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 56/171 (32%), Gaps = 45/171 (26%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 107 ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 127

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
                     +H T  P    +V    + GCVR+++    +    +   +P
Sbjct: 128 RLGDPKLGLGIHGTNAP---ASVPGVRSHGCVRMKSPDALEFAKTIASGSP 175


>gi|326383899|ref|ZP_08205583.1| cell wall hydrolase/autolysin [Gordonia neofelifaecis NRRL B-59395]
 gi|326197358|gb|EGD54548.1| cell wall hydrolase/autolysin [Gordonia neofelifaecis NRRL B-59395]
          Length = 383

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 14/105 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV------------AFDAYVESAVKLFQ 146
           ++ L LG+   +V  +R  L   G L  +                  FD   + AV+ FQ
Sbjct: 1   MQVLRLGDHGSAVAEIRAILATRGLLPAAPSTPPSTTHTPWSPPEAVFDQACDRAVRAFQ 60

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
              GL   G+V  +T  A+      R+    + L R+   +    
Sbjct: 61  QERGLIVDGLVGYATYTAL-REASYRLGARIL-LYRLSAPMTGDD 103



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 43/141 (30%), Gaps = 16/141 (11%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSD-----IPIISKETIAQTEKAIAF 84
           P   S      +  +       FD    R       +       ++   T     +A   
Sbjct: 27  PAAPSTPPSTTHTPWSPP-EAVFDQACDRAVRAFQQERGLIVDGLVGYATYTALREA--S 83

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Y+          + +  L    +   V  L+ RL   G       +   F     SAV L
Sbjct: 84  YRLGA------RILLYRLSAPMTGDDVATLQSRLQNLGYYHG--LVDGVFGEGTHSAVCL 135

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           +Q  +GL   G+   STL ++
Sbjct: 136 YQTEYGLSSDGICGPSTLRSL 156


>gi|319408707|emb|CBI82362.1| putative Peptidoglycan-binding domain 1 protein [Bartonella
           schoenbuchensis R1]
          Length = 395

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L LG     V+ L++RL   G       +   +     SA+  FQ  H L+  G
Sbjct: 214 SVRANGLRLGCKGYRVEALQKRLNDLGY---PVAIDSDYGPNTRSAIFAFQADHNLEVDG 270

Query: 156 MVDSSTLEAMNV 167
           +V + T  A++V
Sbjct: 271 VVGAKTQAALDV 282


>gi|312959750|ref|ZP_07774266.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas fluorescens WH6]
 gi|311285916|gb|EFQ64481.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas fluorescens WH6]
          Length = 321

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 51/177 (28%), Gaps = 45/177 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    L     G+ V     + +GR    +PI H+ I     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRLYYFPKGQNVVYTFPLGIGREGWGSPIAHTSIIAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++            
Sbjct: 148 TWTPPASIKAE-----------------------------------HAANGDPLPNVVPA 172

Query: 303 GKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
           G  N +   K    +       H +     F    R  + GC R+   N++++   +
Sbjct: 173 GPDNPLGPFKFTLGTPGYLI--HGSNMK--FGIGTRT-SHGCFRMFNNNVLEMAGMV 224


>gi|307823175|ref|ZP_07653405.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
 gi|307735950|gb|EFO06797.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
          Length = 470

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 58/212 (27%), Gaps = 66/212 (31%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKV--GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                + + +N+    L      +        V +GR    TP+  + I     NP W +
Sbjct: 146 PDSPHKGIALNLANMRLFYYPKKQPDKVYTYPVGIGRQGWNTPMGQTSIVAKDANPSWNV 205

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI ++                                   ++ +  +       G  N
Sbjct: 206 PESIHRE-----------------------------------HAEKGDSLPKVVRSGPDN 230

Query: 307 AMAST--KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            +     ++ F        H T +P          + GCV++              P   
Sbjct: 231 PLGLYAMRLGFP-GYLI--HGTNKPYGIGMQ---ISHGCVQL-------------YPEDI 271

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
               ++         V +   + +H  Y++AW
Sbjct: 272 EVLFKKA-------TVGMPVRI-IHQPYLTAW 295


>gi|186684193|ref|YP_001867389.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186466645|gb|ACC82446.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 361

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 7/132 (5%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
           E        +     + +++ + S +P++   T   +   IA  Q I        +    
Sbjct: 26  EKRQKSWWTKRSKSFSAIEILLLSAMPLLIASTPLVS---IAAPQKIAQINPGDSISRPN 82

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V  L+  L + G    +  +   +     SAV  F+   GL+P G+VD+ST
Sbjct: 83  LKVGSQGERVSELQAALKLLGFYSGA--VDGIYSENTASAVARFKQAAGLNPDGVVDAST 140

Query: 162 LEAM--NVPVDL 171
            + +  N PV  
Sbjct: 141 WQRLFPNQPVAA 152



 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V +L+++L   G L         F    E+AVK  Q R+GL+  G+V  ST
Sbjct: 297 LRIGLRGSEVVKLQQQLKKLGFLKGDADGD--FGETTETAVKAAQKRYGLEADGVVGGST 354

Query: 162 LEAM 165
            E +
Sbjct: 355 WEVL 358


>gi|255283144|ref|ZP_05347699.1| putative peptidoglycan binding domain protein [Bryantella
           formatexigens DSM 14469]
 gi|255266217|gb|EET59422.1| putative peptidoglycan binding domain protein [Bryantella
           formatexigens DSM 14469]
          Length = 1954

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 4/71 (5%)

Query: 100 RPLHLGN----SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                G+    +S  V+++++ L  +G      G+   + +  E+AVK FQ   GL   G
Sbjct: 450 GVFRFGDGLDEASDDVKKIQQALEDAGFTLTQFGVDGKYGSETEAAVKAFQEAEGLLADG 509

Query: 156 MVDSSTLEAMN 166
           +V   T+ A+N
Sbjct: 510 IVGPETIAALN 520


>gi|269213836|ref|ZP_06158207.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria cinerea ATCC 14685]
 gi|269145157|gb|EEZ71575.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria cinerea ATCC 14685]
          Length = 338

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 70/232 (30%), Gaps = 71/232 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +G +     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGNLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 107 ---------------------RGDGVKTI------------------AAGPDNPLGPVFV 127

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNTP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKD-SI---IQFRDDIYGLDNVHVGII 420
            T     V          +Y  A   +D      +    D YG +N+ +  +
Sbjct: 171 ATGSPASV----------IYQMAGLNEDAGNNLWLAAFHDPYGKNNLDIASL 212


>gi|304407599|ref|ZP_07389251.1| cell wall hydrolase SleB [Paenibacillus curdlanolyticus YK9]
 gi|304343550|gb|EFM09392.1| cell wall hydrolase SleB [Paenibacillus curdlanolyticus YK9]
          Length = 217

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 56/142 (39%), Gaps = 23/142 (16%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            + +G+    V  L++RL + G L      +  +    + AV+ FQ    +  +G+V  +
Sbjct: 33  TMSVGSKGPQVVDLQQRLRMLGYLSSEADGN--YGEGTKDAVQRFQKGAAIAQTGVVGQT 90

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T+ A+      R     +     + +  +  G +Y              +G+V + + V+
Sbjct: 91  TMHALKKVTVSRTDLSMLA----RIVYSEARGEQY--------------DGQVAIAA-VV 131

Query: 221 VGRVDRQTPILHSRINRIMFNP 242
           + RV   +      I  ++F P
Sbjct: 132 LNRVA--SNDFPDTIEEVIFAP 151


>gi|237803632|ref|ZP_04591217.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331025614|gb|EGI05670.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 321

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 53/176 (30%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVIAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 172

Query: 303 GKINAMASTKIEF-YSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K     S      H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGLGMSGYLI--HGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|317130360|ref|YP_004096642.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315475308|gb|ADU31911.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 318

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+   +V+ L+E+L   G       +   F    E+AV+ FQ   GL   G+V  +T
Sbjct: 182 LRLGSRGQAVRDLQEKLTNQGY--HLGSIDGIFGPATENAVRKFQRDRGLTIDGIVGQNT 239

Query: 162 LEAM 165
           L+A+
Sbjct: 240 LQAL 243



 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L  G+   +V+ L+  L   G    + G+   F    E AVK FQ  +G+   G
Sbjct: 249 TVSSTTLRRGSRGEAVRSLQSDLHSLGY--ETGGIDGIFGPATERAVKSFQRTNGITVDG 306

Query: 156 MVDSSTLEAM 165
           +V + TL  +
Sbjct: 307 IVGNQTLSKL 316


>gi|254785273|ref|YP_003072701.1| peptidoglycan binding domain containing protein [Teredinibacter
           turnerae T7901]
 gi|237686178|gb|ACR13442.1| Peptidoglycan binding domain containing protein [Teredinibacter
           turnerae T7901]
          Length = 554

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           PE    PL +G  + ++  L ++  +  D  PS      F+A +   VK+FQ  HGL+  
Sbjct: 471 PEGFSEPLVMGQKNPAIGWLAKQFALL-DERPSPLTDDRFNANLRERVKIFQRTHGLEDD 529

Query: 155 GMVDSSTLEAMN 166
           G++ + TL  +N
Sbjct: 530 GIIGARTLMKVN 541


>gi|242239100|ref|YP_002987281.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
 gi|242131157|gb|ACS85459.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
          Length = 327

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     GK   +   + +G++ R TP++ +R+     NP W
Sbjct: 90  MLLPDTPREGIVVNLAELRLYYFPKGKGTVIVYPIGIGQLGRNTPVMVTRVIERRPNPTW 149

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
           +   +I                   +             + +D  +  P         G 
Sbjct: 150 IPTANI-----------------RRHYKE----------QGIDLPAVVPG--------GP 174

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +        Y +H T     F   +R  +SGC+R+    D+   L  D P  
Sbjct: 175 DNPMGLFALRLEKSGGVYSIHGTNAN--FGIGMR-VSSGCIRL-RPEDI-EALFNDVPVG 229

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       I+  V+      +++   +
Sbjct: 230 TRVQIINEPIKVAVEPDGKRYIEVHQPL 257


>gi|300866027|ref|ZP_07110760.1| hypothetical protein OSCI_2560002 [Oscillatoria sp. PCC 6506]
 gi|300335971|emb|CBN55918.1| hypothetical protein OSCI_2560002 [Oscillatoria sp. PCC 6506]
          Length = 333

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G++   V+ L++RL   G        ++ + +  E AV+ FQ+  GL  +G+ D+ T
Sbjct: 58  IRPGSNGEQVRALQQRLQAQGYFPIGTTPTIYYRSITEEAVRQFQLARGLSATGIADNLT 117

Query: 162 LEAMNVPV 169
           L  + +  
Sbjct: 118 LYYLGLGP 125



 Score = 43.3 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 8/74 (10%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L   +   +V+ L+ +L           +   F    E AVK FQ R G+   G+   S
Sbjct: 247 TLGRNSRGPAVRELQNQLARL--RITPGAIDGVFGNDTEYAVKRFQQRMGIYADGIATPS 304

Query: 161 TLEAM------NVP 168
              A+      NVP
Sbjct: 305 VQIALRNIIAGNVP 318



 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +V  L+++L   G       +   +     SAV  FQ  + L P+G  DS+TL A+
Sbjct: 161 DKNVTFLQQKLKALGFF--YGAVDGKYRERTLSAVTRFQQANNLVPTGCADSTTLAAI 216


>gi|294664477|ref|ZP_06729827.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292605757|gb|EFF49058.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 565

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L        V+ L++ L   G  D          A+      AVK FQ  HGL   G+V 
Sbjct: 433 LRDNARGAEVRTLQQTLQQLGYKDAGGNELKADGAYGQRTSDAVKAFQRAHGLQDDGVVG 492

Query: 159 SSTLEAM 165
             T  A+
Sbjct: 493 RDTQAAL 499


>gi|108807738|ref|YP_651654.1| hypothetical protein YPA_1743 [Yersinia pestis Antiqua]
 gi|145598053|ref|YP_001162129.1| hypothetical protein YPDSF_0750 [Yersinia pestis Pestoides F]
 gi|162421439|ref|YP_001606997.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis Angola]
 gi|165927498|ref|ZP_02223330.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939524|ref|ZP_02228070.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011816|ref|ZP_02232714.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166210795|ref|ZP_02236830.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400728|ref|ZP_02306234.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167422171|ref|ZP_02313924.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167470494|ref|ZP_02335198.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis FV-1]
 gi|229837923|ref|ZP_04458082.1| hypothetical protein YPH_0148 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229895083|ref|ZP_04510259.1| hypothetical protein YPS_2868 [Yersinia pestis Pestoides A]
 gi|229898484|ref|ZP_04513629.1| hypothetical protein YPF_2918 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|294503598|ref|YP_003567660.1| hypothetical protein YPZ3_1488 [Yersinia pestis Z176003]
 gi|108779651|gb|ABG13709.1| hypothetical protein YPA_1743 [Yersinia pestis Antiqua]
 gi|145209749|gb|ABP39156.1| hypothetical protein YPDSF_0750 [Yersinia pestis Pestoides F]
 gi|162354254|gb|ABX88202.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis Angola]
 gi|165912573|gb|EDR31204.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165920553|gb|EDR37830.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989281|gb|EDR41582.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166207975|gb|EDR52455.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166958983|gb|EDR56004.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049581|gb|EDR60989.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|229688032|gb|EEO80103.1| hypothetical protein YPF_2918 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229694289|gb|EEO84336.1| hypothetical protein YPH_0148 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229701845|gb|EEO89868.1| hypothetical protein YPS_2868 [Yersinia pestis Pestoides A]
 gi|262361640|gb|ACY58361.1| hypothetical protein YPD4_1453 [Yersinia pestis D106004]
 gi|262365618|gb|ACY62175.1| hypothetical protein YPD8_1492 [Yersinia pestis D182038]
 gi|294354057|gb|ADE64398.1| hypothetical protein YPZ3_1488 [Yersinia pestis Z176003]
          Length = 339

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 69/208 (33%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+   +   + +G++ R TP + + I++ + NP W
Sbjct: 91  MLLPDTPREGIVINLAELRLYYYPKGQNKVIVYPIGIGQLGRDTPTMVTSISQKIPNPTW 150

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL                         E          G 
Sbjct: 151 T-PTANIRK----------NYLA------------------------EGITLPSVVPAGP 175

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L    P  
Sbjct: 176 DNPMGQFALRLSAGRGEYLIHGTNAD--FGIGLR-VSSGCIRL-RPDDI-EALFNSVPKG 230

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 231 TRVQIINEPVKYAVEPDGKRYVEVHQPL 258


>gi|312135357|ref|YP_004002695.1| spore cortex-lytic enzyme [Caldicellulosiruptor owensensis OL]
 gi|311775408|gb|ADQ04895.1| spore cortex-lytic enzyme [Caldicellulosiruptor owensensis OL]
          Length = 226

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G++   V  ++ RL   G  D        +  Y+  AV+ FQ ++GL   G+  S TL 
Sbjct: 40  YGSTGPEVIEIQRRLKQWGYYDGPIDGIYGYKTYM--AVRYFQAKNGLKVDGIAGSETLR 97

Query: 164 AMNV 167
           A+ +
Sbjct: 98  ALGI 101


>gi|294625068|ref|ZP_06703716.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600653|gb|EFF44742.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 630

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 25/67 (37%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L        V+ L++ L   G  D          A+      AVK FQ  HGL   G+V 
Sbjct: 433 LRDNARGAEVRTLQQTLQQLGYKDAGGNELKADGAYGQRTSDAVKAFQRAHGLQDDGVVG 492

Query: 159 SSTLEAM 165
             T  A+
Sbjct: 493 RDTQAAL 499


>gi|308069833|ref|YP_003871438.1| spore cortex-lytic enzyme precursor (Germination-specific amidase)
           (SCLE) [Paenibacillus polymyxa E681]
 gi|305859112|gb|ADM70900.1| Spore cortex-lytic enzyme precursor (Germination-specific amidase)
           (SCLE) [Paenibacillus polymyxa E681]
          Length = 217

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 22/152 (14%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
             G  +     L  G  S  V  L+++L   G      G +  + +    AV  FQ  +G
Sbjct: 22  APGQAQAQTSALKKGVQSERVLELQQQLHSLGYFK--AGFTAYYGSLTSKAVARFQRDNG 79

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L P G+  ++T   +     +R+  L       + +  +  G  +         +     
Sbjct: 80  LIPDGVAGAATQAKLESFGKVRVTALD---QLARIIYSEARGESF------EGQVAV--- 127

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           G V L   V  G          S I  ++  P
Sbjct: 128 GAVVLN-RVQSG-------EFPSSIPDVILQP 151


>gi|291458271|ref|ZP_06597661.1| putative peptidoglycan binding domain protein [Oribacterium sp.
           oral taxon 078 str. F0262]
 gi|291418804|gb|EFE92523.1| putative peptidoglycan binding domain protein [Oribacterium sp.
           oral taxon 078 str. F0262]
          Length = 570

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           + LG  S  V  L++ L   G L P +  S  F    + AV  FQ R+GL+  GM  + T
Sbjct: 338 MRLGEQSDEVANLQKLLAKYGYL-PQEKASGYFGELTKQAVADFQSRNGLNADGMAGAQT 396

Query: 162 LEAM 165
           L  +
Sbjct: 397 LAKL 400



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG     +  ++ RL   G L  +  ++ +FDA  E+AVK  Q  +GL   G V  ST 
Sbjct: 195 KLGFQGNDITNVQYRLYNLGYLTEASQINGSFDAVTETAVKKMQEVNGLKVDGTVGQST- 253

Query: 163 EAMNVPVDLRIRQLQV 178
           + +    +++   + +
Sbjct: 254 DELLYSDNVKANIIAL 269



 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G  +  V+ L++RL+  G +D  +  +  +      AV+ FQ + G+   G+   ST
Sbjct: 122 LTVGVINSVVRDLQQRLMDLGYMDVDEP-TTYYGDATSKAVQYFQRQVGMPMDGITGVST 180

Query: 162 LEAM 165
            +A+
Sbjct: 181 WDAL 184



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    + LG  S  V++ + RLI  G +  S   +  F    ++A++ FQ R+     G 
Sbjct: 262 VKANIIALGEQSDIVKKYQARLIALGYMSGSADGN--FGQSTQNAIRAFQSRNDQIVDGY 319

Query: 157 VDSSTLEAM 165
           +   T  ++
Sbjct: 320 LGPDTRASL 328


>gi|312127392|ref|YP_003992266.1| spore cortex-lytic enzyme [Caldicellulosiruptor hydrothermalis 108]
 gi|311777411|gb|ADQ06897.1| spore cortex-lytic enzyme [Caldicellulosiruptor hydrothermalis 108]
          Length = 226

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           IA YQ +  +     + +   + G++   V  +++RL   G  D        +  Y+  A
Sbjct: 20  IADYQHLKFKYALSPIVLS--YYGSTGPEVIEIQKRLKQWGYYDGPIDGIYGYKTYM--A 75

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V+ FQ ++GL   G+  S TL A+ +
Sbjct: 76  VRYFQAKNGLKVDGIAGSETLRALGI 101


>gi|271969998|ref|YP_003344194.1| hypothetical protein Sros_8817 [Streptosporangium roseum DSM 43021]
 gi|270513173|gb|ACZ91451.1| hypothetical protein Sros_8817 [Streptosporangium roseum DSM 43021]
          Length = 276

 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 18/138 (13%)

Query: 91  RGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
            GG P  P  P LH G+    V++++ RL   G    +      +   +  AV  FQ  +
Sbjct: 67  SGGVPARPQFPTLHPGDEGALVEKVQSRLDRLGF--KAGPPGSEYGPALRMAVWAFQKAN 124

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL     VD  T +A++ P             R++ L+    G   V +++    L A +
Sbjct: 125 GLPAVDRVDPPTWQALSHP------------ERVRPLVP-SGGSVRVEIDLRRQLLTAWK 171

Query: 210 NGKVGLRSTV--IVGRVD 225
           +GK  L S +    G+  
Sbjct: 172 DGKPALISHISTGTGKPY 189


>gi|167037413|ref|YP_001664991.1| SpoIID/LytB domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115826|ref|YP_004185985.1| SpoIID/LytB domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856247|gb|ABY94655.1| SpoIID/LytB domain [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319928917|gb|ADV79602.1| SpoIID/LytB domain protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 762

 Score = 61.4 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 6/78 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G     V+ L+  L   G  + +   +  F +    AV  FQ  + L P G+V 
Sbjct: 117 TRTLKYGMQGNDVKELQNALAKLGYFNTTP--TGYFGSITRDAVIKFQKANNLTPDGIVG 174

Query: 159 SSTLEA----MNVPVDLR 172
             T +A    +NV +  R
Sbjct: 175 PLTQKAISEKLNVSLPSR 192



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G     V+ L+  L   G  + +   +  F +    AV  FQ  + L P G+V 
Sbjct: 216 TRTLKYGMQGNDVKELQNALAKLGYFNTTP--TGYFGSITRDAVIKFQKANNLTPDGIVG 273

Query: 159 SSTLEAM 165
             T +A+
Sbjct: 274 PLTQKAI 280



 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    R +  G++   V+ L+  L   G    +K ++  +D    +AV  FQ  + L   
Sbjct: 303 PSGFSRNMKKGDTGDDVKLLQTLLKEIGYY--TKDITGTYDDNTLNAVMDFQKYYSLAVD 360

Query: 155 GMVDSSTL 162
           G+   +T+
Sbjct: 361 GIAGINTI 368



 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V+ L++ L  +G    +   +  F    ++AV   Q  + L P G+    T
Sbjct: 29  LKYGMRSPEVRHLQQNLNKAGYFVTANP-TDYFGPATKNAVMRLQKDYNLVPDGIYGPLT 87

Query: 162 LEAM 165
            +A+
Sbjct: 88  EKAL 91


>gi|51892227|ref|YP_074918.1| spore cortex-lytic enzyme precursor [Symbiobacterium thermophilum
           IAM 14863]
 gi|51855916|dbj|BAD40074.1| spore cortex-lytic enzyme precursor [Symbiobacterium thermophilum
           IAM 14863]
          Length = 224

 Score = 61.4 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G +  +V+ +++RL   G  +    +   F    E AV+ FQ ++GL   G+V   
Sbjct: 30  TLRRGATGDAVREVQQRLRDWGYYEGQ--VDGRFGPLTEKAVRFFQSKNGLTVDGVVGPE 87

Query: 161 TLEAM 165
           T  A+
Sbjct: 88  TWAAL 92


>gi|167040080|ref|YP_001663065.1| SpoIID/LytB domain-containing protein [Thermoanaerobacter sp. X514]
 gi|300914163|ref|ZP_07131479.1| SpoIID/LytB domain protein [Thermoanaerobacter sp. X561]
 gi|307724601|ref|YP_003904352.1| SpoIID/LytB domain-containing protein [Thermoanaerobacter sp. X513]
 gi|166854320|gb|ABY92729.1| SpoIID/LytB domain [Thermoanaerobacter sp. X514]
 gi|300889098|gb|EFK84244.1| SpoIID/LytB domain protein [Thermoanaerobacter sp. X561]
 gi|307581662|gb|ADN55061.1| SpoIID/LytB domain protein [Thermoanaerobacter sp. X513]
          Length = 762

 Score = 61.4 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 6/78 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G     V+ L+  L   G  + +   +  F +    AV  FQ  + L P G+V 
Sbjct: 117 TRTLKYGMQGNDVKELQNALAKLGYFNTTP--TGYFGSITRDAVIKFQKANNLTPDGIVG 174

Query: 159 SSTLEA----MNVPVDLR 172
             T +A    +NV +  R
Sbjct: 175 PLTQKAISEKLNVSLPSR 192



 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G     V+ L+  L   G  + +   +  F +    AV  FQ  + L P G+V 
Sbjct: 216 TRTLKYGMQGNDVKELQNALAKLGYFNTTP--TGYFGSITRDAVIKFQKANNLTPDGIVG 273

Query: 159 SSTLE 163
             T +
Sbjct: 274 PLTQK 278



 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    R +  G++   V+ L+  L   G    +K ++  +D    +AV  FQ  + L   
Sbjct: 303 PSGFSRNMKKGDTGDDVKLLQTLLKEIGYY--TKDITGTYDDNTLNAVMDFQKYYSLAVD 360

Query: 155 GMVDSSTL 162
           G+   +T+
Sbjct: 361 GIAGINTI 368



 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V+ L++ L  +G    +   +  F    ++AV   Q  + L P G+    T
Sbjct: 29  LKYGMRSPEVRHLQQNLNKAGYFVTANP-TDYFGPATKNAVMRLQKDYNLVPDGIYGPLT 87

Query: 162 LEAM 165
            +A+
Sbjct: 88  EKAL 91


>gi|307131455|ref|YP_003883471.1| hypothetical protein Dda3937_03663 [Dickeya dadantii 3937]
 gi|306528984|gb|ADM98914.1| hypothetical protein Dda3937_03663 [Dickeya dadantii 3937]
          Length = 332

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 68/211 (32%), Gaps = 48/211 (22%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           ++ LL        ++VN+    L     GK   +   + +G++ R TP++ + +     N
Sbjct: 88  LQMLLP-DTPREGIVVNLAELRLYYFPKGKNTVIVYPIGIGQLGRNTPVMVTHVIERRPN 146

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W           +        Y K+  I +            V               
Sbjct: 147 PTW-----------IPTANTRRHY-KEQGITL---------PAMV--------------P 171

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            G  N M    +        Y +H T     F   +R  +SGC+R+    D+   L  D 
Sbjct: 172 GGPDNPMGLFALRLEKSGGVYSIHGTNAD--FGIGMR-VSSGCIRL-RPEDI-EALFNDA 226

Query: 361 PTWSR-----YHIEEVVKTRKTTPVKLATEV 386
           P  +R       I+  V+      V++   +
Sbjct: 227 PVGTRVQIINEPIKIAVEPDGKRYVEVHQPL 257


>gi|253989393|ref|YP_003040749.1| hypothetical protein PAU_01913 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780843|emb|CAQ84005.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 358

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L      + +++N+    L     GK   +   + +G++ R TP++ + +++++ +P W
Sbjct: 88  MLLPDTPRQGIVINLAELRLYYFPKGKNKVIVYPIGIGQLGRNTPVMTTSVSQLIKDPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P   I+K           +  +  I +                             G 
Sbjct: 148 T-PTKNIRK-----------HYAEQGITL-----------------------PAVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L    P  
Sbjct: 173 ENPMGLFALRLAAGRGEYLIHGTNAD--FGIGMR-VSSGCIRL-RPDDI-EALFNSVPRG 227

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 228 TRVQIINEAVKYSVEPNGKRYVEVHQPL 255


>gi|39996637|ref|NP_952588.1| general secretion pathway protein-related protein [Geobacter
           sulfurreducens PCA]
 gi|39983518|gb|AAR34911.1| general secretion pathway protein-related protein [Geobacter
           sulfurreducens PCA]
 gi|298505651|gb|ADI84374.1| peptidoglycan-binding ATPase, putative [Geobacter sulfurreducens
           KN400]
          Length = 540

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 94  WPELPIRPLH--LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W      PL    G+    V+ L+E L  +G  D        FDA  E  V+ FQ   GL
Sbjct: 449 WKNFHGIPLRTRAGSRGKGVKPLQELLKGAGFYDEKPTGD--FDAATEEGVRRFQQSEGL 506

Query: 152 DPSGMVDSSTLEAM 165
            P G     TL  +
Sbjct: 507 QPDGKAGEKTLALL 520


>gi|269962801|ref|ZP_06177142.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832491|gb|EEZ86609.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 308

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 63/202 (31%), Gaps = 55/202 (27%)

Query: 189 QKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +  + +++N+    L        V     V +GR+ R TP + + I++   NP W  P
Sbjct: 97  PDVPHKGIVINLAELRLYYFPAKENVVHVFPVGIGRIGRDTPEMTTSISQKRPNPTWTPP 156

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + +  A     P  +                                    G  N 
Sbjct: 157 SSI-RAEYKAKGIDLPAVV----------------------------------PAGPDNP 181

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           +    +     +  Y +H T +   F   +R  ++GC+R+              P    +
Sbjct: 182 LGMFALRLAYGHGEYLIHGTNKD--FGIGMR-VSAGCIRM-------------DPNDIEW 225

Query: 367 HIEEVVKTRKTTPVKLATEVPV 388
             ++V +  K   +     V V
Sbjct: 226 LFDKVRRGEKVKIIN--QPVKV 245


>gi|167032930|ref|YP_001668161.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida GB-1]
 gi|166859418|gb|ABY97825.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida GB-1]
          Length = 325

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 44/170 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L     G+ V     + +GR    +PI +++I     NP W  P SI +K+
Sbjct: 100 IVINLAEYRLYYFPKGQNVVHTFPLGIGREGWGSPIANTKITAKTPNPTWTPPASI-RKE 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++ +          G  N +   K  
Sbjct: 159 ----------------------------------HAADGDILPAVVPAGPDNPLGPFKFT 184

Query: 315 FYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                     H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 185 LGVPGYLI--HGSNKK--FGIGMRT-SHGCFRMLNNNVLELSKMVPVGTP 229


>gi|88703621|ref|ZP_01101337.1| general secretion pathway protein A [Congregibacter litoralis KT71]
 gi|88702335|gb|EAQ99438.1| general secretion pathway protein A [Congregibacter litoralis KT71]
          Length = 560

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 100 RPLHLGNSS---VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           R L  G+       V  L  RL    D        + FD  +E+ VKLFQ + GL   G+
Sbjct: 471 RTLQRGDRGDDVARVAALFARL----DGQIQPLTEMLFDPRLEARVKLFQQQQGLRADGV 526

Query: 157 VDSSTLEAM 165
           +  +TL A+
Sbjct: 527 LGENTLRAL 535


>gi|295705154|ref|YP_003598229.1| cell wall endopeptidase [Bacillus megaterium DSM 319]
 gi|294802813|gb|ADF39879.1| cell wall endopeptidase [Bacillus megaterium DSM 319]
          Length = 391

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G    +V  L+++L   G    S G++  F +   SAVK FQ  +GL   G     T
Sbjct: 190 LRQGMKGSAVSSLQQKLKNKGYF--SAGVTGYFGSITTSAVKSFQRANGLLVDGEAGPDT 247

Query: 162 LEAMN 166
           L  +N
Sbjct: 248 LNKLN 252



 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            LH G S+  V+ L+++L   G        +  + +   SAVK FQ  +GL   G+   S
Sbjct: 29  TLHPGTSNSDVKELQQKLKNKGYFTYG-TTTNYYGSITTSAVKSFQRANGLSADGIAGPS 87

Query: 161 TLE 163
           T  
Sbjct: 88  TFN 90



 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G++  +VQ L+++L   G    +   +  F +  ++AV  FQ  +GL   G+   +TL
Sbjct: 110 RVGSTGPNVQSLQQQLKNKGYFKGT--TTQYFGSITKNAVMAFQRANGLSVDGIAGPATL 167

Query: 163 EAM 165
             +
Sbjct: 168 SKL 170


>gi|294499766|ref|YP_003563466.1| cell wall endopeptidase [Bacillus megaterium QM B1551]
 gi|294349703|gb|ADE70032.1| cell wall endopeptidase [Bacillus megaterium QM B1551]
          Length = 388

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G    +V  L+++L   G    S G++  F +   SAVK FQ  +GL   G     T
Sbjct: 187 LRQGMKGSAVSSLQQKLKNKGYF--SAGVTGYFGSITTSAVKSFQRANGLLVDGEAGPDT 244

Query: 162 LEAMN 166
           L  +N
Sbjct: 245 LNKLN 249



 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            LH G S+  V+ L+++L   G        +  + +   SAVK FQ  +GL   G+   S
Sbjct: 29  TLHPGTSNSDVKELQQKLKNKGYFTYG-TTTNYYGSITTSAVKSFQRANGLSADGIAGPS 87

Query: 161 TLE 163
           T  
Sbjct: 88  TFN 90



 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G++  +VQ L+++L   G    +   +  F +  ++AV  FQ  +GL   G+   +TL
Sbjct: 107 RVGSTGPNVQSLQQQLKNKGYFKGT--TTQYFGSITKNAVMAFQRANGLSVDGIAGPATL 164

Query: 163 EAM 165
             +
Sbjct: 165 SKL 167


>gi|226358219|ref|YP_002787958.1| bifunctional protein, precursor : N-acetylmuramoyl-L-alanine
           amidase; Muramoylpentapeptide carboxypeptidase
           [Deinococcus deserti VCD115]
 gi|226319862|gb|ACO47856.1| putative bifunctional protein, precursor :
           N-acetylmuramoyl-L-alanine amidase; Muramoylpentapeptide
           carboxypeptidase [Deinococcus deserti VCD115]
          Length = 359

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W  L IR +  G+S  +VQ  + +L   G    + G    F A  ESAV+ FQ   GL  
Sbjct: 290 WERL-IRTVRRGDSGPAVQAAQGQLAARGYGVTADG---VFGAGTESAVRSFQSSRGLTS 345

Query: 154 SGMVDSSTLEAM 165
            G+V  +T  A+
Sbjct: 346 DGIVGPNTWHAL 357



 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 8/72 (11%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP         G +   V+   +RL++S     S     ++     SAV  FQ   GL P
Sbjct: 230 WPTT-----RSGQTGERVRS-AQRLLVSH--GQSLTADGSYGPATASAVSAFQSGAGLTP 281

Query: 154 SGMVDSSTLEAM 165
            G++ S+T E +
Sbjct: 282 DGVIGSATWERL 293


>gi|323705059|ref|ZP_08116635.1| NLP/P60 protein [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535485|gb|EGB25260.1| NLP/P60 protein [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 226

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V  L++ L   G    + G+   F +  +SAV   Q R+GL P G+V  +T
Sbjct: 28  LKYGSKGQAVVSLQQTLNRLGY--STGGIDGIFGSKTKSAVIALQRRYGLSPDGIVGPAT 85

Query: 162 LEAMNVP 168
              +N  
Sbjct: 86  EAVLNRT 92


>gi|284048182|ref|YP_003398521.1| NLP/P60 protein [Acidaminococcus fermentans DSM 20731]
 gi|283952403|gb|ADB47206.1| NLP/P60 protein [Acidaminococcus fermentans DSM 20731]
          Length = 232

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
               G S   V  ++E+L++ G           + A   +AVK +Q   GL   G++ + 
Sbjct: 24  SFKPGQSGPEVAAIQEQLLMEGY--DIGIPDGVYGARTVAAVKKYQASMGLAADGVIGNF 81

Query: 161 TLEAM 165
           T + +
Sbjct: 82  TYKKL 86


>gi|262273986|ref|ZP_06051798.1| hypothetical protein VHA_000962 [Grimontia hollisae CIP 101886]
 gi|262221796|gb|EEY73109.1| hypothetical protein VHA_000962 [Grimontia hollisae CIP 101886]
          Length = 320

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 64/161 (39%), Gaps = 39/161 (24%)

Query: 189 QKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +    +++N+    L   + + +      + +GR+ R TPI+ ++I++   NP W  P
Sbjct: 91  PDVEYEGIVINLAELRLYYFDTDNRKVHVFPIGIGRIGRDTPIMQTKISQKRENPTWTPP 150

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            S+ +K+          YL++ NI         V  + V                G  N 
Sbjct: 151 ASL-RKE----------YLEERNI---------VLPDVV--------------PAGPDNP 176

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
           + +  +       +Y +H T     F   +R  ++GC+R+R
Sbjct: 177 LGTHALRLAYGTGSYLIHGT-NKS-FGIGLR-VSAGCIRMR 214


>gi|90413965|ref|ZP_01221950.1| hypothetical protein P3TCK_07866 [Photobacterium profundum 3TCK]
 gi|90325027|gb|EAS41542.1| hypothetical protein P3TCK_07866 [Photobacterium profundum 3TCK]
          Length = 301

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 65/176 (36%), Gaps = 42/176 (23%)

Query: 196 VLVNIPAASLEAV--ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     ++  +     + +GRV R TP + +++++ + NP W  P + I+K
Sbjct: 94  IIINLAELRLYYFPEDDKSIVYIFPIGIGRVGRATPNMITKVSQKIENPTWT-PTANIRK 152

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +          Y +  +I +                             G  N +    +
Sbjct: 153 E----------YREKKDIEL-----------------------PAVVPAGPENPLGEYAM 179

Query: 314 EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                   Y +H T +   F   +R  +SGC+R+ N  D+  WL    P  +   I
Sbjct: 180 RLAYSRGEYLIHGTNKD--FGIGMR-VSSGCIRM-NPWDI-EWLFPQVPRGTSVQI 230


>gi|54302422|ref|YP_132415.1| hypothetical protein PBPRB0743 [Photobacterium profundum SS9]
 gi|46915844|emb|CAG22615.1| hypothetical protein PBPRB0743 [Photobacterium profundum SS9]
          Length = 301

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 65/176 (36%), Gaps = 42/176 (23%)

Query: 196 VLVNIPAASLEAV--ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     ++  +     + +GRV R TP + +++++ + NP W  P + I+K
Sbjct: 94  IIINLAELRLYYFPEDDKSIVYIFPIGIGRVGRATPNMITKVSQKIENPTWT-PTANIRK 152

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +          Y +  +I +                             G  N +    +
Sbjct: 153 E----------YREKKDIEL-----------------------PAVVPAGPENPLGEYAM 179

Query: 314 EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                   Y +H T +   F   +R  +SGC+R+ N  D+  WL    P  +   I
Sbjct: 180 RLAYSRGEYLIHGTNKD--FGIGMR-VSSGCIRM-NPWDI-EWLFPQVPRGTSVQI 230


>gi|325291385|ref|YP_004267566.1| spore cortex-lytic enzyme [Syntrophobotulus glycolicus DSM 8271]
 gi|324966786|gb|ADY57565.1| spore cortex-lytic enzyme [Syntrophobotulus glycolicus DSM 8271]
          Length = 234

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+S   V+ L+++L   G       +   F +  E A+K FQ   G+   G+    T
Sbjct: 39  LKEGSSGQEVKSLQKKLSQLGY--SVGAIDGKFGSATEQALKRFQKNRGIKTDGIFGDET 96

Query: 162 LEAMNV 167
            + +N 
Sbjct: 97  AKELNR 102


>gi|330988430|gb|EGH86533.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 321

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPDVVPA 172

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           G  N +   K       + Y +H + +   F   +R  + GC R+   N+++L   
Sbjct: 173 GPDNPLGPFKFGL--GLSGYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|300863516|ref|ZP_07108468.1| putative Peptidoglycan-binding domain 1 [Oscillatoria sp. PCC 6506]
 gi|300338472|emb|CBN53610.1| putative Peptidoglycan-binding domain 1 [Oscillatoria sp. PCC 6506]
          Length = 224

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           FYQ +      P    + +  G     V  +++RL   G       +   F +   SAV 
Sbjct: 66  FYQGLQE----PPKKEKTVSKGAKGAEVAAIQKRLQAHGF--NVGAIDSDFGSRTVSAVS 119

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            FQ   GL   G+VD +T +A+
Sbjct: 120 AFQQSKGLKADGIVDRTTWDAL 141



 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 17/116 (14%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGW------------PELP--IRPLHLGNSSV 109
           D     +S  +  Q  K +     I+ R  W             ++P   + L  G +  
Sbjct: 109 DFGSRTVSAVSAFQQSKGLKA-DGIVDRTTWDALKDEPMVLAQKQIPESSKVLAKGAAGS 167

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            V+ L+ RL + G       +   F A   +AVK FQ  + L   G VD +T +A+
Sbjct: 168 KVKTLQVRLEMQGY--DPGPIDGIFGARTLTAVKDFQATNNLKVDGTVDEATWKAL 221


>gi|261380022|ref|ZP_05984595.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria subflava NJ9703]
 gi|284797229|gb|EFC52576.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria subflava NJ9703]
          Length = 368

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 70/232 (30%), Gaps = 71/232 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+SI ++
Sbjct: 48  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 107

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 108 ---------------------RNDGVKSVP------------------AGPNNPLGPVFV 128

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                  +  +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 129 RLGDPKLSLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 171

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF----RDDIYGLDNVHVGII 420
            T     V          +Y  A   +D+          D Y   N+    +
Sbjct: 172 ATGSPASV----------IYQMASLNEDANQNLWLAAYRDPYDKKNLDTAAL 213


>gi|312793773|ref|YP_004026696.1| spore cortex-lytic enzyme [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180913|gb|ADQ41083.1| spore cortex-lytic enzyme [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 225

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G++   V  +++RL   G  D        +  Y+  AV+ FQ ++GL   G+  S TL 
Sbjct: 40  YGSTGPEVIEIQKRLKQWGYYDGPIDGIYGYKTYM--AVRYFQAKNGLKVDGIAGSETLR 97

Query: 164 AMNV 167
           A+ +
Sbjct: 98  ALGI 101


>gi|15616210|ref|NP_244515.1| hypothetical protein BH3648 [Bacillus halodurans C-125]
 gi|10176272|dbj|BAB07367.1| BH3648 [Bacillus halodurans C-125]
          Length = 1113

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL LG     V +L+  L   G    S   +  F    +  V+ FQ   GL   G+V 
Sbjct: 248 TGPLRLGMYREDVIQLKINLEKVGF-PVSSNPNTYFGPTTDRQVRAFQQSQGLTADGIVG 306

Query: 159 SSTLEAM 165
           SST++A+
Sbjct: 307 SSTIKAL 313



 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 10/94 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +G        L+E+L   G +  S   +  +    E+ VK FQ  HGL  +G+ D
Sbjct: 460 TGPLKMGMYREDAITLKEQLAALGYV-ISNNPTNYYGPSTEATVKQFQKDHGLQVNGIAD 518

Query: 159 SSTLEA----MNVPV-----DLRIRQLQVNLMRI 183
           S TL+     +N  +     + ++ +L++ L R+
Sbjct: 519 SLTLKKIQELLNQTLYFGVRNDKVVELKLELERL 552



 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  RPL LG     V +L++ L  +G    S   +  F     + +K FQ  H L  +G
Sbjct: 664 ALATRPLQLGMYHPDVVQLKKDLAKAGYFV-SNNPNDYFGPTTTTKLKEFQTDHNLPATG 722

Query: 156 MVDSSTLE 163
           + D  TL 
Sbjct: 723 IADRQTLN 730



 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 50/146 (34%), Gaps = 25/146 (17%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE 79
           L + L  V  P+ ++      N  +    + +   F     +  D    I+   TI   E
Sbjct: 263 LKINLEKVGFPVSSNP-----NTYFGPTTDRQVRAFQQSQGLTADG---IVGSSTIKALE 314

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           +A+                   L LG     V  L++ L   G    S   +  F    E
Sbjct: 315 EAL----------------SGVLFLGVRDSKVIDLKKMLADLGY-GVSDNPTTYFGPVTE 357

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAM 165
             VK FQ   G   +G+VD +T E +
Sbjct: 358 EQVKRFQNDFGRPVTGVVDRATFEFI 383



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G +   V +L+E L I G    S   +  F +  E+ V+ +Q  +GL  +G+V    
Sbjct: 393 LRSGMNHPEVLKLKEYLAILGY-RVSNTPNDFFGSVTEAKVREYQYDNGLQQTGIVTKQL 451

Query: 162 LEAM 165
           L  +
Sbjct: 452 LTEL 455



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G  +  +  L+E L I G    S   +  + A     V+ FQ ++GL  +G+ D  T++ 
Sbjct: 603 GMRASGIITLKEHLAILGF-RVSDNPTTLYGAVTTEQVRQFQQKYGLSSTGIADQKTVDQ 661

Query: 165 M 165
           +
Sbjct: 662 L 662



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 10/89 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             +G+    +  ++  L I G    S   +  +    E  V+ FQ ++ L  +G VD  T
Sbjct: 181 FQVGDRDPEIITIKLHLEILGF-KVSNNPTSYYGIQTEEMVRAFQSQYQLPVTGKVDQET 239

Query: 162 LEAMNV--PVDLRIR-------QLQVNLM 181
              ++      LR+        QL++NL 
Sbjct: 240 RNLLSQRATGPLRLGMYREDVIQLKINLE 268



 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L+ G  +  V  L+  L   G L  S   +  F +  E  V+ F+ R  L  +G+V+ 
Sbjct: 531 QTLYFGVRNDKVVELKLELERLG-LSVSSSPTTYFGSVTEEMVREFKRRANLPVTGVVND 589

Query: 160 STLEAM 165
             L+ M
Sbjct: 590 EQLKFM 595



 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGMV 157
            L LG    +V  L++ L     L+     S    FD  +E  +   Q     +PSG V
Sbjct: 42  TLKLGVDHQNVLVLKQVLYSLEYLESDDPESFTTYFDPDLEQVIVDLQEMFQFEPSGEV 100


>gi|149181183|ref|ZP_01859682.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus sp. SG-1]
 gi|148851082|gb|EDL65233.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus sp. SG-1]
          Length = 347

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 10/143 (6%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS-KETIAQTEKAIAFY---- 85
            HA ++D+        IV     +   R D     +   IS +E +     A   Y    
Sbjct: 119 YHAYLIDKYGVNPREDIVAHSTLDPSRRTDPQNALNRYGISWEEFLEDVNNAYRTYFTNE 178

Query: 86  --QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
                 +RGG   L + PL  G+    V+ ++ +L+ +G   P  G    F    E AV 
Sbjct: 179 ETSQPAARGG--SLSL-PLGEGDQGALVREIQTKLVKAGFSLPRYGADGIFGQETEMAVM 235

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            FQ ++GL   G+V   TL  +N
Sbjct: 236 RFQRKYGLRVDGLVGMQTLGKLN 258



 Score = 44.1 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPS 154
            LP   L  G+    V++L+  L    + DP + +   F      A++ FQ  +  L   
Sbjct: 271 PLPGGILQEGDEGNGVRQLQRALKQI-NFDPGE-IDGIFGPKTMDAIRRFQETYAELKND 328

Query: 155 GMVDSSTLEAM 165
           G+   +T + +
Sbjct: 329 GIYGPNTRKYI 339


>gi|289663317|ref|ZP_06484898.1| hypothetical protein XcampvN_09602 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 255

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGM 156
             L  G    SV++L+ +L   G              F    + AV+ FQ  HGL   G+
Sbjct: 32  GKLEQGERGESVKQLQGQLAQLGYHGRDGKPLHPDGDFGGNTKHAVEQFQREHGLQVDGV 91

Query: 157 VDSSTLEAM 165
           V   T  A+
Sbjct: 92  VGRQTQAAL 100


>gi|325924927|ref|ZP_08186357.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
 gi|325544664|gb|EGD16017.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
          Length = 301

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 18/152 (11%)

Query: 21  PMGLSLVEKP--IHASVLDEIINESYHSIVNDRFDNFLAR--VDMGIDSDIPIISKETIA 76
             G S  +KP   + + +     E+  + +   +   +            I     + +A
Sbjct: 146 DTGKSYYDKPGGSNHASITSAETENALNAMRQSYRQAIESGVAPEQAWKQINSQPPQQLA 205

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVA 133
           QT++     +D    G         L  G     V++L+ +L   G +            
Sbjct: 206 QTQQ---HKRDAAKDG--------KLEQGERGEQVKQLQGQLAQLGAVGRDGKPLHADGD 254

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           F    + AV+ FQ  HGL   G+    T  A+
Sbjct: 255 FGGNTKHAVEQFQREHGLQIDGIAGQQTQAAL 286


>gi|22125832|ref|NP_669255.1| hypothetical protein y1940 [Yersinia pestis KIM 10]
 gi|51596632|ref|YP_070823.1| hypothetical protein YPTB2308 [Yersinia pseudotuberculosis IP
           32953]
 gi|108812015|ref|YP_647782.1| hypothetical protein YPN_1853 [Yersinia pestis Nepal516]
 gi|153948284|ref|YP_001400722.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis IP
           31758]
 gi|167424834|ref|ZP_02316587.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|170024092|ref|YP_001720597.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186895688|ref|YP_001872800.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229902327|ref|ZP_04517447.1| hypothetical protein YP516_2061 [Yersinia pestis Nepal516]
 gi|270490494|ref|ZP_06207568.1| ErfK/YbiS/YcfS/YnhG [Yersinia pestis KIM D27]
 gi|21958762|gb|AAM85506.1|AE013797_1 hypothetical protein y1940 [Yersinia pestis KIM 10]
 gi|51589914|emb|CAH21546.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108775663|gb|ABG18182.1| hypothetical protein YPN_1853 [Yersinia pestis Nepal516]
 gi|152959779|gb|ABS47240.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis IP
           31758]
 gi|167056021|gb|EDR65799.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169750626|gb|ACA68144.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186698714|gb|ACC89343.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229680662|gb|EEO76758.1| hypothetical protein YP516_2061 [Yersinia pestis Nepal516]
 gi|270338998|gb|EFA49775.1| ErfK/YbiS/YcfS/YnhG [Yersinia pestis KIM D27]
 gi|320015053|gb|ADV98624.1| hypothetical protein YPC_2032 [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 354

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 69/208 (33%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+   +   + +G++ R TP + + I++ + NP W
Sbjct: 91  MLLPDTPREGIVINLAELRLYYYPKGQNKVIVYPIGIGQLGRDTPTMVTSISQKIPNPTW 150

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL                         E          G 
Sbjct: 151 T-PTANIRK----------NYLA------------------------EGITLPSVVPAGP 175

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L    P  
Sbjct: 176 DNPMGQFALRLSAGRGEYLIHGTNAD--FGIGLR-VSSGCIRL-RPDDI-EALFNSVPKG 230

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 231 TRVQIINEPVKYAVEPDGKRYVEVHQPL 258


>gi|251796689|ref|YP_003011420.1| cell wall hydrolase SleB [Paenibacillus sp. JDR-2]
 gi|247544315|gb|ACT01334.1| cell wall hydrolase SleB [Paenibacillus sp. JDR-2]
          Length = 221

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 9/97 (9%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L+ RL   G  D +  ++  +    E AV+ FQ  +GL   G+ +  
Sbjct: 36  TLSYGSYGPDVPDLQFRLKTLGYFDNTA-ITTFYGKMTEEAVRKFQADYGLKSDGVAEEK 94

Query: 161 TLEAM-NVPVDLR-IRQLQVNLMRIKKLLEQKMGLRY 195
           T   +  V  + + +  L       + +  +  G  Y
Sbjct: 95  TWTQLKKVSANQKELDLLA------RIIYAEARGESY 125


>gi|304397642|ref|ZP_07379519.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
 gi|304354814|gb|EFM19184.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
          Length = 341

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 65/205 (31%), Gaps = 47/205 (22%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                  ++VN+    L     G+   +   + +G++   TP++ ++I++ + NP W   
Sbjct: 93  PDTPREGIVVNLAELRLYYYPKGEDKVIVYPIGIGQLGAATPVMVTQISQKIPNPTWTPT 152

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            +I ++                 I +                             G  N 
Sbjct: 153 PNIRKR------------YAKEGITL-----------------------PGVVPAGPDNP 177

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           M    +        Y +H T     F   +R  +SGC+R+R   +    L    P  +R 
Sbjct: 178 MGQFAMRLARGTGQYLIHGTNAK--FGIGMR-VSSGCIRLR--SEDIEALFNAAPKGTRV 232

Query: 367 HI-----EEVVKTRKTTPVKLATEV 386
            I     +  V+      V++   +
Sbjct: 233 QIINQPVKYAVEPDGKRYVEVHQPL 257


>gi|149377350|ref|ZP_01895095.1| putative ErfK/YbiS/YcfS/YnhG family protein [Marinobacter algicola
           DG893]
 gi|149358362|gb|EDM46839.1| putative ErfK/YbiS/YcfS/YnhG family protein [Marinobacter algicola
           DG893]
          Length = 355

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 60/197 (30%), Gaps = 52/197 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI----- 250
           +++N+    L     GKV +   V VG  D  +P+ ++++   + +P W  P SI     
Sbjct: 122 IIINLAEYRLYYFTEGKVQV-YPVGVGTDDNPSPLTNAKVTMPLESPAWYPPASIRAEYE 180

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
              + +  +                                          PG  N + S
Sbjct: 181 AAGEYLPRMI----------------------------------------PPGPGNPLGS 200

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHI 368
             +   S     +H T    LF   +   + GC R+   +I      + K TP       
Sbjct: 201 HALML-SEKGYLIHGTN--KLFGVGM-QVSHGCFRMYNEDISRFVYEVSKGTPVQVIREP 256

Query: 369 EEVVKTRKTTPVKLATE 385
            ++        +++   
Sbjct: 257 VKIGLKGNEVWLEVHRP 273


>gi|284993429|ref|YP_003411984.1| cell wall hydrolase/autolysin [Geodermatophilus obscurus DSM 43160]
 gi|284066675|gb|ADB77613.1| cell wall hydrolase/autolysin [Geodermatophilus obscurus DSM 43160]
          Length = 383

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 98  PIRPLHLGNSSVSVQ----RLRER--LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
            ++PL  G+   +V      LR    L  +G  + +     A+D   E AV+ FQ   GL
Sbjct: 6   SMQPLGPGDRGHAVADVHAALRALTLLPAAGSAEEASLDEAAYDPATELAVRHFQQVRGL 65

Query: 152 DPSGMVDSSTLEAM 165
              G V   T  A+
Sbjct: 66  TVDGRVGEETYRAL 79



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           P+        V  L++RL   G    +  +   F    E+ ++ FQ  +GL   G    +
Sbjct: 95  PVRP-MRGDDVTNLQDRLHELGY--DAGPVDGVFGPETEAGLRAFQRDYGLTSDGTCGPA 151

Query: 161 TLEAM 165
           TL A+
Sbjct: 152 TLRAL 156


>gi|113475624|ref|YP_721685.1| peptidoglycan binding domain-containing protein [Trichodesmium
           erythraeum IMS101]
 gi|110166672|gb|ABG51212.1| Peptidoglycan-binding domain 1 [Trichodesmium erythraeum IMS101]
          Length = 487

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 96  ELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +P+ R L LGN+ + V+RL++RL   G     + ++  FD   E+AV  FQ R+ + P+
Sbjct: 259 TIPVERVLRLGNTGLDVRRLQQRLRSLGYY--QRQITNYFDLSTETAVIDFQKRNRITPT 316

Query: 155 GMVDSSTLEAM 165
           G+V  +T   +
Sbjct: 317 GIVGQTTKAFL 327



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 22/104 (21%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L  G  +  V  ++ +L   G       ++  +D    +AV  FQ  +G+ P+G V
Sbjct: 189 STKVLSFGEVNPQVAIIQRQLAELGFYKGQ--INSIYDQKTRTAVIQFQNVYGITPTGQV 246

Query: 158 DSSTLEAM---------------NVPVDLRIRQLQVNLMRIKKL 186
             +T E +               N  +D+R  Q      R++ L
Sbjct: 247 GYTTREFLFETRTIPVERVLRLGNTGLDVRRLQ-----QRLRSL 285



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+ S  V  ++  L   G    +  L+  +    E AVK FQ   GL P+G ++ +T
Sbjct: 111 LRCGDFSEIVAEVQRELRELGYF--TANLTGYYGQETEIAVKQFQQEKGLKPTGEIEPTT 168

Query: 162 LEAM 165
              +
Sbjct: 169 --WL 170



 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  GN   +V++L+  L   G       +   F    E AV+ FQ   GL  +G+    T
Sbjct: 357 LKPGNEGWAVEQLQILLTRLGYYSGV--IDGFFGLRTEFAVRSFQQDLGLVDTGVATIDT 414

Query: 162 LEAM 165
           L+A+
Sbjct: 415 LQAL 418


>gi|291447641|ref|ZP_06587031.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces roseosporus
           NRRL 15998]
 gi|291350588|gb|EFE77492.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces roseosporus
           NRRL 15998]
          Length = 245

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G +   V +L+ R+      +    +  ++     +AVK FQ  +GL   G+  
Sbjct: 39  TRTLKAGATGNDVTQLQVRVAGYPGYNAVLAIDGSYGPATTAAVKRFQAAYGLAADGVAG 98

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 99  PATQAKL 105


>gi|257876689|ref|ZP_05656342.1| carboxyl-terminal protease [Enterococcus casseliflavus EC20]
 gi|257810855|gb|EEV39675.1| carboxyl-terminal protease [Enterococcus casseliflavus EC20]
          Length = 476

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 94  WPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           +P LP    L  G SS +V  L + L   G           F+    +AVK FQ  H L 
Sbjct: 383 FPPLPRDNALKAGQSSTAVNNLNQFLEALGY----TTSGDTFNDETTAAVKAFQEDHDLK 438

Query: 153 PSGMVDSSTLEAMNVPVDLRIR 174
            +G VD+ T +A+   V  +++
Sbjct: 439 ATGEVDADTAQAIEKEVAEKLK 460


>gi|239944169|ref|ZP_04696106.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           roseosporus NRRL 15998]
 gi|239990625|ref|ZP_04711289.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           roseosporus NRRL 11379]
          Length = 223

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G +   V +L+ R+      +    +  ++     +AVK FQ  +GL   G+  
Sbjct: 17  TRTLKAGATGNDVTQLQVRVAGYPGYNAVLAIDGSYGPATTAAVKRFQAAYGLAADGVAG 76

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 77  PATQAKL 83


>gi|146307579|ref|YP_001188044.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina ymp]
 gi|145575780|gb|ABP85312.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina ymp]
          Length = 318

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 46/171 (26%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    +     G+ V     + +GR    +P+   R+     NP W  P+SI +++
Sbjct: 100 IVINLAEYRMYYFPKGQNVVHTYPLGIGREGWGSPLGTGRVTVKTPNPAWYPPKSI-REE 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++ E         PG  N +   K+ 
Sbjct: 159 ----------------------------------HAAEGDILPTVVPPGPDNPLGPYKMT 184

Query: 315 --FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             F        H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 185 LSFP-GYLI--HGSNKK--FGIGMR-VSHGCFRMLNHNVLELAAMVPVGTP 229


>gi|261420639|ref|YP_003254321.1| NLP/P60 protein [Geobacillus sp. Y412MC61]
 gi|319768309|ref|YP_004133810.1| NLP/P60 protein [Geobacillus sp. Y412MC52]
 gi|261377096|gb|ACX79839.1| NLP/P60 protein [Geobacillus sp. Y412MC61]
 gi|317113175|gb|ADU95667.1| NLP/P60 protein [Geobacillus sp. Y412MC52]
          Length = 450

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+   +V  L+ RL   G       ++  + A    AVK FQ  +GL  +G  D +
Sbjct: 98  TLAIGSRGAAVSDLQRRLKQLGYF-RYPQITGYYGAVTADAVKQFQQANGLPATGRADRA 156

Query: 161 TLEAM 165
           TLE +
Sbjct: 157 TLERL 161



 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G SS  + ++++RL   G     K     F A  E AVK FQ    L  +G+VD +T 
Sbjct: 29  KKGMSSPEITQIQQRLKEQGFFTYPKATG-YFGAITEEAVKAFQRAMNLPATGIVDDATY 87

Query: 163 EAMNVPVD 170
             +  P  
Sbjct: 88  AKLKKPAS 95



 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+    V++L+++L   G    S  ++  +      AV+ FQ  +GL  +G VD+ 
Sbjct: 175 TLTIGSRGDDVRKLQQQLKQLGYFTYSD-ITGYYGVLTADAVRRFQRDNGLPVTGAVDNQ 233

Query: 161 TLEAM 165
           T   +
Sbjct: 234 TAARL 238



 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 8/97 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V+R++ +L   G       ++  + A    AV+ FQ    L  +G+VD  T
Sbjct: 261 LSIGALGDDVKRIQTKLKELGYF--WTAITGYYGAATADAVRRFQQAAQLPATGIVDGET 318

Query: 162 LEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
            E +       ++  +++          + +G  YV 
Sbjct: 319 YERLIGQAPAAKLDVIELVAD-----AAELLGTPYVW 350


>gi|308186671|ref|YP_003930802.1| Protein erfK/srfK precursor [Pantoea vagans C9-1]
 gi|308057181|gb|ADO09353.1| Protein erfK/srfK precursor [Pantoea vagans C9-1]
          Length = 341

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 65/205 (31%), Gaps = 47/205 (22%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                  ++VN+    L     G+   +   + +G++   TP++ ++I++ + NP W   
Sbjct: 93  PDTPREGIVVNLAELRLYYYPKGEDKVIVYPIGIGQLGAATPVMVTQISQKIPNPTWTPT 152

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            +I ++                 I +                             G  N 
Sbjct: 153 PNIRKR------------YAKEGITL-----------------------PGVVPAGPDNP 177

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           M    +        Y +H T     F   +R  +SGC+R+R   +    L    P  +R 
Sbjct: 178 MGQFAMRLARGTGQYLIHGTNAK--FGIGMR-VSSGCIRLR--SEDIEALFNAAPKGTRV 232

Query: 367 HI-----EEVVKTRKTTPVKLATEV 386
            I     +  V+      V++   +
Sbjct: 233 QIINQPVKYAVEPDGKRYVEVHQPL 257


>gi|119484927|ref|ZP_01619409.1| hypothetical protein L8106_15680 [Lyngbya sp. PCC 8106]
 gi|119457745|gb|EAW38869.1| hypothetical protein L8106_15680 [Lyngbya sp. PCC 8106]
          Length = 159

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V RL+ RL    D + +  ++  F +  E AVK FQ R GL   G+V   T
Sbjct: 94  LSFGSVGNDVIRLQNRLN---DFEINLLVNGIFASKTEGAVKQFQRRFGLTADGIVGPFT 150

Query: 162 LEAM 165
             A+
Sbjct: 151 WNAL 154



 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+   +++ L+ERL I G       +   F    E+ VK FQ  + L   G+V S T 
Sbjct: 18  RRGSQGKTIKNLQERLSILGY---KLLIDEVFGMATEAMVKQFQRENRLLVDGIVGSETW 74

Query: 163 EAM 165
             +
Sbjct: 75  NTL 77


>gi|54307653|ref|YP_128673.1| putative general secretion pathway protein A [Photobacterium
           profundum SS9]
 gi|46912076|emb|CAG18871.1| putative general secretion pathway protein A [Photobacterium
           profundum SS9]
          Length = 556

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      +  G     V  L ++L     L  ++  S  FD  V   ++ FQ    L   
Sbjct: 472 PHGSKTTIRYGQQGPRVAWLNQQLNA--FLGVTQTRSDYFDQSVLEKLRRFQRSQDLAAD 529

Query: 155 GMVDSSTL----EAMNVP 168
           G+    TL     A+N+P
Sbjct: 530 GIAGPLTLMVLDSALNLP 547


>gi|325918977|ref|ZP_08181044.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325534822|gb|EGD06751.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 644

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPS 154
               L        V++L++ L   G  D          A+      AVK FQ  HGL   
Sbjct: 441 TSGVLREKAHGAEVEKLQQTLQQLGYKDANGNELKADSAYGQRTGEAVKAFQRAHGLQDD 500

Query: 155 GMVDSSTLEAM 165
           G+V   TL+A+
Sbjct: 501 GIVGVDTLKAL 511


>gi|257867798|ref|ZP_05647451.1| carboxyl-terminal protease [Enterococcus casseliflavus EC30]
 gi|257874125|ref|ZP_05653778.1| carboxyl-terminal protease [Enterococcus casseliflavus EC10]
 gi|257801881|gb|EEV30784.1| carboxyl-terminal protease [Enterococcus casseliflavus EC30]
 gi|257808289|gb|EEV37111.1| carboxyl-terminal protease [Enterococcus casseliflavus EC10]
          Length = 476

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 94  WPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           +P LP    L  G SS +V  L + L   G           F+    +AVK FQ  H L 
Sbjct: 383 FPPLPRDNALKAGQSSTAVNNLNQFLKALGY----ATSGDTFNDETTAAVKAFQEAHNLK 438

Query: 153 PSGMVDSSTLEAMNVPVDLRIR 174
            +G VD+ T +A+   V  +++
Sbjct: 439 ATGEVDADTAQAIEKEVAEKLK 460


>gi|126665585|ref|ZP_01736567.1| hypothetical protein MELB17_23370 [Marinobacter sp. ELB17]
 gi|126630213|gb|EBA00829.1| hypothetical protein MELB17_23370 [Marinobacter sp. ELB17]
          Length = 336

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 56/185 (30%), Gaps = 52/185 (28%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +  +        +++N+    L    +  V +   V VG  +  +P+ ++++   + +P 
Sbjct: 97  RHYVMPDAKREGIVINLAEYRLYYFTDSGVQV-YPVGVGTEENPSPLTNAQVTMALTSPA 155

Query: 244 WVIPRSI-----IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
           W  P SI        D +  +                                       
Sbjct: 156 WYPPESIRAEHAAVGDFLPRMI-------------------------------------- 177

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
              PG  N + S  +   S     +H T +   F   +   + GC R+   +I      +
Sbjct: 178 --PPGPDNPLGSHALIL-SEKGYLIHGTNKK--FGVGM-AVSHGCFRMYNEDISRFAYQI 231

Query: 357 LKDTP 361
            + TP
Sbjct: 232 AQGTP 236


>gi|187779972|ref|ZP_02996445.1| hypothetical protein CLOSPO_03568 [Clostridium sporogenes ATCC
           15579]
 gi|187773597|gb|EDU37399.1| hypothetical protein CLOSPO_03568 [Clostridium sporogenes ATCC
           15579]
          Length = 423

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R L  G+    V++++  L   G       +   F +  E AVK FQ+ + L   G++ 
Sbjct: 1   MRVLKKGDRGSDVKKIQAVLQKIGY--DVGPIDGIFGSKTEEAVKRFQLNNRLAVDGIIG 58

Query: 159 SSTLEAMN 166
             T E +N
Sbjct: 59  PKTYEVLN 66


>gi|168184305|ref|ZP_02618969.1| zinc carboxypeptidase family protein [Clostridium botulinum Bf]
 gi|237794727|ref|YP_002862279.1| zinc carboxypeptidase family protein [Clostridium botulinum Ba4
           str. 657]
 gi|182672655|gb|EDT84616.1| zinc carboxypeptidase family protein [Clostridium botulinum Bf]
 gi|229260492|gb|ACQ51525.1| zinc carboxypeptidase family protein [Clostridium botulinum Ba4
           str. 657]
          Length = 423

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E AVK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--DVGLIDGIFGSKTEEAVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LEAMN 166
            E +N
Sbjct: 62  YEILN 66


>gi|325915197|ref|ZP_08177520.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325538557|gb|EGD10230.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 341

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G     VQ L++ L   G  D           F      AV  FQ +HGL   G+V 
Sbjct: 149 LKRGIRGDEVQSLQQDLNRLGVRDTQGNRLAEDGRFGDNTREAVMAFQKQHGLQQDGVVG 208

Query: 159 SSTLEAMNVP 168
             T  A++ P
Sbjct: 209 RDTRAALSAP 218


>gi|241759332|ref|ZP_04757438.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria flavescens SK114]
 gi|241320468|gb|EER56765.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria flavescens SK114]
          Length = 353

 Score = 61.0 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 70/232 (30%), Gaps = 71/232 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+SI ++
Sbjct: 33  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 93  ---------------------RNDGVKSVP------------------AGPNNPLGPVFV 113

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                  +  +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 114 RLGDPKLSLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 156

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF----RDDIYGLDNVHVGII 420
            T     V          +Y  A   +D+          D Y   N+    +
Sbjct: 157 ATGSPASV----------IYQMASLNEDANQNLWLAAYRDPYDKKNLDTAAL 198


>gi|288941087|ref|YP_003443327.1| peptidoglycan-binding domain-containing protein [Allochromatium
           vinosum DSM 180]
 gi|288896459|gb|ADC62295.1| Peptidoglycan-binding domain 1 protein [Allochromatium vinosum DSM
           180]
          Length = 604

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 2/74 (2%)

Query: 94  WPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +  G     V+ LR+ +     L    G +  +D  +ESA++ FQ   GL
Sbjct: 505 WQLPPGGSTLIRPGAVGEEVRWLRDLVSRVPGLASLPGPADRYDVTLESALRAFQASKGL 564

Query: 152 DPSGMVDSSTLEAM 165
              G+    T  A+
Sbjct: 565 TADGVAGPRTFIAL 578


>gi|300722818|ref|YP_003712110.1| hypothetical protein XNC1_1866 [Xenorhabdus nematophila ATCC 19061]
 gi|297629327|emb|CBJ89926.1| putative enzyme with LysM domain [Xenorhabdus nematophila ATCC
           19061]
          Length = 318

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 43/206 (20%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L      + +++N+    L     G    +   + +G++ R TP + + +++++ +P W
Sbjct: 93  MLLPDTPRQGIIINLAELRLYYYPKGANHVIVYPIGIGQLGRNTPTMTTSVSQLIGSPTW 152

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+KD  +     P  +                                   PG 
Sbjct: 153 T-PTANIRKDYASRGIILPAVI----------------------------------PPGP 177

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL-LKDT 360
            N M    +   +    Y +H T     F   +R  +SGC+R+   +I DL   + LK  
Sbjct: 178 DNPMGDFALRLAAGRGEYLIHGTNAN--FGIGMR-VSSGCIRLRPDDIRDLFSTVPLKTR 234

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEV 386
                  I+  V+      V++   +
Sbjct: 235 VQVINEPIKYSVEPDGKRYVEVHQPL 260


>gi|325920553|ref|ZP_08182475.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
           19865]
 gi|325548946|gb|EGD19878.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
           19865]
          Length = 663

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 8/165 (4%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
            +   +G + +  P+    L  +       + +   D+F    +  + ++  + S +   
Sbjct: 279 AVTAVVGTAAIHNPMTVQGLINL--ARTGMLADHVADSFSEATERHLMTETVVPSMDDHI 336

Query: 77  QTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISG---DLDPSKGLS 131
           Q+ +  A  Q    +    +   +   L  G+    V  L+  LI  G    +     ++
Sbjct: 337 QSIEHKAREQAAPEQTSPAQAQAKDVALRPGDRGTEVLALQASLIQLGINARVKTPIEIT 396

Query: 132 VAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMNVPVDLRIRQ 175
             +D   E  V+ FQ+ HG+ + +G+ D +T  A+    D  I Q
Sbjct: 397 GLYDQQTERGVQAFQLMHGMDEVNGIADRATRAAVQQHADDAIAQ 441


>gi|119383021|ref|YP_914077.1| peptidoglycan binding domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119372788|gb|ABL68381.1| Peptidoglycan-binding domain 1 protein [Paracoccus denitrificans
           PD1222]
          Length = 317

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 8/64 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+  V+V+RL+  L I         +  +F    + AV+ FQ RHGL   G+V   T
Sbjct: 188 LRSGDKGVAVRRLQYALGI--------DVDGSFGPDTDKAVRDFQKRHGLTVDGVVGQRT 239

Query: 162 LEAM 165
            +A+
Sbjct: 240 WKAL 243


>gi|256370856|ref|YP_003108680.1| Peptidoglycan-binding domain 1 protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256007440|gb|ACU53007.1| Peptidoglycan-binding domain 1 protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 323

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 10/103 (9%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +P   L  G  S  V+ L  RL   G       +   FD  V  A+  FQ R GL  +G+
Sbjct: 1   MPFVSLRGGERSERVEDLCRRLRRLGF---ELEVRDEFDDEVAEAIVAFQRRRGLPETGV 57

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMR--IK----KLLEQKMGL 193
           VD  T  A+ V    RI    + L R  ++      L+ K+G 
Sbjct: 58  VDLVTWRAV-VEAGFRIGDRLLYLKRPALRGDDVAWLQGKLGS 99



 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 12/82 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W  +      +G+              V  L+ +L   G  DP + +   F     SA+ 
Sbjct: 63  WRAVVEAGFRIGDRLLYLKRPALRGDDVAWLQGKLGSLGF-DPGR-VDGIFGPRTRSALM 120

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            FQ   GL   GM  ++T+E +
Sbjct: 121 EFQANMGLPADGMCGAATIEEL 142


>gi|330808350|ref|YP_004352812.1| hypothetical protein PSEBR_a1605 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376458|gb|AEA67808.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 323

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 45/177 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    L     G+ V     + +GR    +PI H+ I     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRLYYFPKGRNVVYTFPLGIGREGWGSPIAHTSIIAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++ +          
Sbjct: 148 TWTPPASIKAE-----------------------------------HAADGDPLPNVVPA 172

Query: 303 GKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
           G  N +   K    +       H + +   F   +R  + GC R+   N++++   +
Sbjct: 173 GPDNPLGPFKFTLGTPGYLI--HGSNKK--FGIGMRT-SHGCFRMFNNNVLEMAGMV 224


>gi|329935475|ref|ZP_08285335.1| hypothetical protein SGM_0827 [Streptomyces griseoaurantiacus M045]
 gi|329304999|gb|EGG48866.1| hypothetical protein SGM_0827 [Streptomyces griseoaurantiacus M045]
          Length = 268

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GM 156
              L  G+S  +V  L++RL+   D+         +DA + +AV  FQ+ +G+     G+
Sbjct: 194 AGTLREGDSGPAVSELQQRLLRVPDVYRDGATDGHYDAVLRAAVARFQLWYGIRGDESGV 253

Query: 157 VDSSTLEAM 165
               T   +
Sbjct: 254 YGDDTRRDL 262


>gi|271500201|ref|YP_003333226.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
 gi|270343756|gb|ACZ76521.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
          Length = 334

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 69/211 (32%), Gaps = 48/211 (22%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           ++ LL        ++VN+    L     GK   +   + +G++ R TP++ + +     N
Sbjct: 88  LQMLLP-DTPREGIVVNLAELRLYYFPKGKNTVIVYPIGIGQLGRNTPVMVTHVIERRPN 146

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W+                 P      +             + +D  +  P        
Sbjct: 147 PTWI-----------------PTANTRRHYKE----------QGIDLPAMVPG------- 172

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            G  N M    +        Y +H T     F   +R  +SGC+R+    D+   L  D 
Sbjct: 173 -GPDNPMGLFALRLEKSGGVYSIHGTNAD--FGIGMR-VSSGCIRL-RPEDI-EALFNDV 226

Query: 361 PTWSRYHI-----EEVVKTRKTTPVKLATEV 386
           P  +R  I     +  V+      V++   +
Sbjct: 227 PVGTRVQIINEPVKIAVEPDGKRYVEVHQPL 257


>gi|319639270|ref|ZP_07994021.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa C102]
 gi|317399454|gb|EFV80124.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa C102]
          Length = 368

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 63/193 (32%), Gaps = 46/193 (23%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+SI ++
Sbjct: 48  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTTLGEHKIGAKAYNPVWHIPKSIQKE 107

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 108 ---------------------RNDGVKSVP------------------AGPNNPLGPVFV 128

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHIEE 370
                  +  +H T  P    +V    + GCVR+++    +    +    P    Y +  
Sbjct: 129 RLGDPKLSLGIHGTNAP---ASVPGVRSHGCVRMKSPDALEFAKTIATGAPASVIYQMAS 185

Query: 371 VVKTRKTTPVKLA 383
            +       + LA
Sbjct: 186 -LNEDANQNLWLA 197


>gi|302532519|ref|ZP_07284861.1| peptidoglycan-binding domain 1 protein [Streptomyces sp. C]
 gi|302441414|gb|EFL13230.1| peptidoglycan-binding domain 1 protein [Streptomyces sp. C]
          Length = 306

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN    V  L+  L+  G    S      F A   +AVK FQ  H L   G+V ++T  A
Sbjct: 22  GNRGTDVLALQRLLVSKG---QSAPADGVFGASTTAAVKRFQASHKLAADGIVGAATWAA 78

Query: 165 M 165
           +
Sbjct: 79  L 79



 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 19/102 (18%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
           A T  A+  +Q         I+    W  L    L  G S  +V  L+      G+L+  
Sbjct: 50  ASTTAAVKRFQASHKLAADGIVGAATWAAL-APTLKEGASGPAVSALQ------GELNAK 102

Query: 128 KGLSVAFDAY----VESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            G  +  D       ++AV+ FQ   GL   G+V  +T + +
Sbjct: 103 AGAGLGVDGKFGDGTKAAVRRFQTAAGLTADGVVGPATWKNL 144


>gi|326776721|ref|ZP_08235986.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657054|gb|EGE41900.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 232

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G +   V +L+ R+      +    +  ++     +AVK FQ  +GL   G+  
Sbjct: 26  TRTLKAGATGNDVTQLQIRVAGYPGYNSVLAIDGSYGPATTAAVKRFQAAYGLAADGVAG 85

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 86  PATQAKL 92


>gi|182436095|ref|YP_001823814.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178464611|dbj|BAG19131.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 245

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G +   V +L+ R+      +    +  ++     +AVK FQ  +GL   G+  
Sbjct: 39  TRTLKAGATGNDVTQLQIRVAGYPGYNSVLAIDGSYGPATTAAVKRFQAAYGLAADGVAG 98

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 99  PATQAKL 105


>gi|294636112|ref|ZP_06714538.1| ErfK/YbiS/YcfS/YnhG family protein [Edwardsiella tarda ATCC 23685]
 gi|291090579|gb|EFE23140.1| ErfK/YbiS/YcfS/YnhG family protein [Edwardsiella tarda ATCC 23685]
          Length = 337

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L      G+      + +G++ R TP + +R+++ + +P W
Sbjct: 91  MLLPDAPREGIVINLAELRLFYYPPGGERVEVYPIGIGQLGRNTPEMVTRVSQHIKDPTW 150

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
               +I                   +                     +          G 
Sbjct: 151 TPTANI-----------------RRHYR------------------EQGITLPAVMPAGP 175

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   ++   Y +H T     F   +R  +SGC+R+    D+   L +  P  
Sbjct: 176 DNPMGRYALRLAAQGGVYLIHGTNAD--FGIGMR-VSSGCIRL-RPDDI-EALFRSVPGN 230

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 231 TRVQIVNQPVKVAVEPDGKRYVEVHQPL 258


>gi|289668377|ref|ZP_06489452.1| hypothetical protein XcampmN_07730 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 616

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 3/70 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
              L        V+ L++ L   G  D           +      AVK FQ  HGL   G
Sbjct: 416 SGVLRENVCGADVRTLQQTLQQLGYKDAHGHELKPDGVYGQRTSEAVKAFQRAHGLQDDG 475

Query: 156 MVDSSTLEAM 165
           +V   T  A+
Sbjct: 476 VVGRDTQAAL 485


>gi|153831567|ref|ZP_01984234.1| ErfK/YbiS/YcfS/YnhG [Vibrio harveyi HY01]
 gi|148872077|gb|EDL70894.1| ErfK/YbiS/YcfS/YnhG [Vibrio harveyi HY01]
          Length = 308

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 63/202 (31%), Gaps = 55/202 (27%)

Query: 189 QKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +  + +++N+    L        V     V +GR+ R TP + + I++   NP W  P
Sbjct: 97  PDVPHKGIVINLAELRLYYFPAKENVVHIFPVGIGRIGRDTPEMTTSISQKRPNPTWTPP 156

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + +  A     P  +                                    G  N 
Sbjct: 157 SSI-RAEYKAKGIDLPAVV----------------------------------PAGPDNP 181

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           +    +     +  Y +H T +   F   +R  ++GC+R+              P    +
Sbjct: 182 LGMFALRLAYGHGEYLIHGTNKD--FGIGMR-VSAGCIRM-------------DPNDIEW 225

Query: 367 HIEEVVKTRKTTPVKLATEVPV 388
             ++V +  K   +     V V
Sbjct: 226 LFDKVRRGEKVKIIN--QPVKV 245


>gi|261251523|ref|ZP_05944097.1| hypothetical protein VIA_001544 [Vibrio orientalis CIP 102891]
 gi|260938396|gb|EEX94384.1| hypothetical protein VIA_001544 [Vibrio orientalis CIP 102891]
          Length = 301

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 64/197 (32%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L   E          V +GRV R TP + + I++   NP W  P SI +K+
Sbjct: 93  IVINLAELRLYYFEPEINKVHIFPVGIGRVGRDTPEMKTTISQKRPNPTWTPPTSI-RKE 151

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             A   + P  +                                    G  N +    + 
Sbjct: 152 YAAKGIELPAVV----------------------------------PAGPENPLGEYALR 177

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                  Y +H T +   F   +R  +SGC+R+ +  D+  WL        +  +     
Sbjct: 178 LSYGAGDYLIHGTNKD--FGIGLR-VSSGCIRM-DPKDI-EWLFPQVKLGEKVRV----- 227

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 228 INEPIKVALEPDRSVFL 244


>gi|320007102|gb|ADW01952.1| Peptidoglycan-binding domain 1 protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 126

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 31/64 (48%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   VQ L+  L+  G    S G+   F A  ESAV+ FQ   G+   G+V  +T   
Sbjct: 61  GDSGAKVQELQALLVFKGFSVGSSGVDGQFGAGTESAVRRFQTSRGISSDGVVGPTTWHY 120

Query: 165 MNVP 168
           +  P
Sbjct: 121 LRTP 124


>gi|225076549|ref|ZP_03719748.1| hypothetical protein NEIFLAOT_01597 [Neisseria flavescens
           NRL30031/H210]
 gi|224952120|gb|EEG33329.1| hypothetical protein NEIFLAOT_01597 [Neisseria flavescens
           NRL30031/H210]
          Length = 353

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 70/232 (30%), Gaps = 71/232 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+SI ++
Sbjct: 33  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +                      G  N +    +
Sbjct: 93  ---------------------RNDGVKSVP------------------AGPNNPLGPVFV 113

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                  +  +H T  P    +V    + GCVR+++   L                 + +
Sbjct: 114 RLGDPKLSLGIHGTNAP---ASVPGVRSHGCVRMKSPDAL--------------EFAKTI 156

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF----RDDIYGLDNVHVGII 420
            T     V          +Y  A   +D+          D Y   N+    +
Sbjct: 157 ATGSPASV----------IYQMASLNEDANQNLWLAAYRDPYDKKNLDTAAL 198


>gi|15615884|ref|NP_244188.1| cell wall-binding protein [Bacillus halodurans C-125]
 gi|10175945|dbj|BAB07041.1| cell wall-binding protein [Bacillus halodurans C-125]
          Length = 311

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH G  S SV  L++ L   G LD  +     F    E AVK FQ  H L   G+    T
Sbjct: 41  LHEGVESESVTELQKLLETEGYLDDFEKG--VFHTETEEAVKQFQKDHELVVDGIAGPQT 98

Query: 162 LEAM 165
           L A+
Sbjct: 99  LGAL 102



 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  L+ +L      + +  L   +D     AV+ FQ +  L   G+    T
Sbjct: 105 LREGDEHEVVVDLKAKLEELKLFEGT--LDQQYDEDTTEAVREFQEKLDLQVDGVAGPET 162

Query: 162 LEAM 165
              +
Sbjct: 163 FGEL 166


>gi|332708202|ref|ZP_08428192.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332353028|gb|EGJ32578.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 435

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 23/177 (12%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGI-----DSDIPIISKE 73
           I  + ++L      A+   +++ +             LA           + D+   S  
Sbjct: 47  ISAIAIALTILSTAANASAKVLQKGSRGSQVTSLQKELAAAGFYKGRITGNYDMLTQSYV 106

Query: 74  TIAQTEKAI------------AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLII 120
            I Q +K +            A Y+   + G    LP    L  G+    V  L+++L  
Sbjct: 107 AIFQQKKGLPIDGVAGPKTLAALYK---TAGTDIRLPTNTQLKRGSRGTVVSDLQKKLTT 163

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            G  +    ++  +    ++AV  FQ   GL   G+   +TL  +N        QL+
Sbjct: 164 LGFFNG--PITGYYGRITQAAVIKFQQAKGLPVDGVAGPNTLFVINGGSIKNATQLR 218



 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           I PL  G+    V  L+ RLI  G     K     F    E+A+K +Q   GL P+G+ D
Sbjct: 368 ITPLKRGSRGTRVNSLQNRLIYLGYYKGLKDG--VFGPATEAALKRYQQDKGLFPNGIAD 425

Query: 159 SSTLEAM 165
           + T  ++
Sbjct: 426 ARTFSSL 432



 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++  SV +L+ RL   G       ++  +    E+AVK +Q+   L  +G+ DS T
Sbjct: 294 LRPGSNGESVTKLQNRLAQLGFYKG--PVTGYYGKLTETAVKDYQLSRELPANGIADSRT 351

Query: 162 LEAM 165
           L A+
Sbjct: 352 LSAL 355



 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  GN   +V +L++R+      +    ++  +    E+ V  FQ   GL  +G+ DS T
Sbjct: 217 LRRGNRGTAVTKLQQRMRELKVYNG--PVTGFYGRLTEAGVVKFQRLRGLPVTGIADSRT 274

Query: 162 LEAMNVPVDLR 172
           L  +    + +
Sbjct: 275 LSDLAKNPNDK 285


>gi|256752566|ref|ZP_05493421.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256748563|gb|EEU61612.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 327

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+    V  L+ RL   G       +   F    E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDKGPFVVNLQARLKSLGF--DPGPIDGIFGRKTEEAVKAYQQSRGLPVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|167036871|ref|YP_001664449.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167039577|ref|YP_001662562.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           sp. X514]
 gi|300915173|ref|ZP_07132488.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307725097|ref|YP_003904848.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|320115293|ref|YP_004185452.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166853817|gb|ABY92226.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X514]
 gi|166855705|gb|ABY94113.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|300888897|gb|EFK84044.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307582158|gb|ADN55557.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|319928384|gb|ADV79069.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 327

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+    V  L+ RL   G       +   F    E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDKGPFVVNLQARLKSLGF--DPGPIDGIFGRKTEEAVKAYQQSRGLPVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|258516740|ref|YP_003192962.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257780445|gb|ACV64339.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 309

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 57/159 (35%), Gaps = 26/159 (16%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
                  VQ L+E+L+  G  +    +   F      AV+  Q +HG+   G+V + T+ 
Sbjct: 44  PNMKGKDVQELQEQLMDLGLYE--DKIDGVFGPSTAQAVQALQEKHGVKTDGIV-NVTIW 100

Query: 164 AMNVPV-DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           AM +      + Q +              G   ++V+    +L    + +   +  V VG
Sbjct: 101 AMLLSEHGATVTQKE---------SPPPQGKPSIVVDTVNRTLTVFIDNEPYRQYYVAVG 151

Query: 223 RVDRQTPILHSRINRIMFNPYW-----------VIPRSI 250
           + +  TPI    + R   N  W            +P  I
Sbjct: 152 KPETPTPIGSWTVVRKAMN--WGTGFGTRWIGLNVPWGI 188


>gi|171316535|ref|ZP_02905752.1| Peptidoglycan-binding domain 1 protein [Burkholderia ambifaria
           MEX-5]
 gi|171098369|gb|EDT43174.1| Peptidoglycan-binding domain 1 protein [Burkholderia ambifaria
           MEX-5]
          Length = 266

 Score = 60.6 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG+    V  L+ +LI +G           + +   +AV  FQ  HGL   G+   
Sbjct: 3   KTLRLGDRGADVSYLQRQLIAAG---ARLDTDAIYGSATRNAVVAFQATHGLVADGIAGP 59

Query: 160 STLEAM 165
            T   +
Sbjct: 60  KTWSTL 65


>gi|303230788|ref|ZP_07317535.1| putative protein P60 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514548|gb|EFL56543.1| putative protein P60 [Veillonella atypica ACS-049-V-Sch6]
          Length = 264

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V  ++++LI  G    +   +  +    + AV+LFQ   GL   G++  +T
Sbjct: 30  LQYGDKGRNVIAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDGIIGPAT 87

Query: 162 LEAMNVPVDLRIRQLQVNL 180
             A+          L  N 
Sbjct: 88  YNALMGAPRTTKTVLSNNA 106


>gi|323140555|ref|ZP_08075482.1| NlpC/P60 family protein [Phascolarctobacterium sp. YIT 12067]
 gi|322415007|gb|EFY05799.1| NlpC/P60 family protein [Phascolarctobacterium sp. YIT 12067]
          Length = 210

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
               G++   V  +++RL+          +   F    E AVK FQ   GL+  G+V S+
Sbjct: 16  SFQRGDNGQEVVAIQKRLLELSY--SINNIDGDFGPETERAVKNFQADKGLEVDGVVGSA 73

Query: 161 TLEAM-NVP-VDLRIRQLQVNLMR 182
           T  A+ N      R   +  N++R
Sbjct: 74  TYRALMNREMPPNRSNSVVRNVLR 97


>gi|319442206|ref|ZP_07991362.1| putative hydrolase [Corynebacterium variabile DSM 44702]
          Length = 396

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 12/76 (15%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQMRH 149
             LG+    V  +R  L   G +D   G                FD  ++SA++ FQ   
Sbjct: 6   YKLGDRGPRVAEVRGTLARLGFIDGFAGDATGEANQRWRPEDETFDEGLDSALRGFQQHR 65

Query: 150 GLDPSGMVDSSTLEAM 165
           G+   G +   TL A+
Sbjct: 66  GIIADGHITEGTLRAL 81



 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 7/94 (7%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V  L+  L   G    +  +   F      AV  +Q+  GL+P G+V  +TL A++ 
Sbjct: 104 GDDVAELQGHLHDLGFF--TSRIDGHFGPMTHDAVAAYQLNAGLNPDGIVGPATLRALSY 161

Query: 168 PVDLRIR----QLQVNLMRIKKLLEQKMGLRYVL 197
            +  RI     Q      +I+    Q  G R VL
Sbjct: 162 -LGRRITGGSPQAIREREQIRAAGPQLTGKRVVL 194


>gi|303229441|ref|ZP_07316231.1| putative protein P60 [Veillonella atypica ACS-134-V-Col7a]
 gi|302515977|gb|EFL57929.1| putative protein P60 [Veillonella atypica ACS-134-V-Col7a]
          Length = 264

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V  ++++LI  G    +   +  +    + AV+LFQ   GL   G++  +T
Sbjct: 30  LQYGDKGRNVIAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDGIIGPAT 87

Query: 162 LEAMNVPVDLRIRQLQVN 179
             A+          L  N
Sbjct: 88  YNALMGAPRTTKAVLSNN 105


>gi|302389944|ref|YP_003825765.1| spore cortex-lytic enzyme [Thermosediminibacter oceani DSM 16646]
 gi|302200572|gb|ADL08142.1| spore cortex-lytic enzyme [Thermosediminibacter oceani DSM 16646]
          Length = 228

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  R L  G+    V +L+ RL   G       +   F    +SAV  FQ   G+   G
Sbjct: 27  TLGDRILKQGSRGDDVAQLQYRLNTLGFWCG--KVDGIFGPKTKSAVMKFQSAKGIKVDG 84

Query: 156 MVDSSTLEAMNVPVDLR 172
           +V   TL AM V    R
Sbjct: 85  IVGPQTLSAMGVYKASR 101


>gi|238919740|ref|YP_002933255.1| hypothetical protein NT01EI_1844 [Edwardsiella ictaluri 93-146]
 gi|238869309|gb|ACR69020.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 340

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 42/185 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+  +    + +G++ R TP + +RI++ + +P W
Sbjct: 90  MLLPDAPREGIVINLAELRLFYYPPGENRVEVYPIGIGQLGRDTPEMVTRISQHIKDPTW 149

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I++D  A     P  +                                    G 
Sbjct: 150 T-PTANIRRDYQAQGISLPAVM----------------------------------PAGP 174

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   ++   Y +H T     F   +R  +SGC+R+    D+   L +  P  
Sbjct: 175 DNPMGRFALRLAAQGGVYLIHGTNAD--FGIGMR-VSSGCIRL-RPDDI-EALFRSVPGG 229

Query: 364 SRYHI 368
           +R  I
Sbjct: 230 TRVQI 234


>gi|320008650|gb|ADW03500.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces flavogriseus ATCC
           33331]
          Length = 245

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G +   V +L+ R  +SG    +    +  ++     +AVK FQ  +GL   G+
Sbjct: 39  SRTLSSGATGADVTQLQIR--VSGYPGYNSVLAVDGSYGPATTAAVKRFQAAYGLTADGV 96

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 97  AGPATFTKL 105


>gi|325920413|ref|ZP_08182342.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas gardneri ATCC 19865]
 gi|325549103|gb|EGD20028.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas gardneri ATCC 19865]
          Length = 466

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 100 RPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
             L  G    SV++L+ +L   G    D  P +     F    + AV+ FQ  HGL   G
Sbjct: 250 GRLEQGERGQSVKQLQSQLAQLGATGRDGKPLQADGD-FGGNTKHAVEHFQREHGLQVDG 308

Query: 156 MVDSSTLEAM 165
           +V   T  A+
Sbjct: 309 VVGQRTQAAL 318


>gi|319409155|emb|CBI82799.1| putative Peptidoglycan-binding domain 1 protein [Bartonella
           schoenbuchensis R1]
          Length = 395

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L LG     V+ L++RL   G       +   +     SA+  FQ  H L+  G
Sbjct: 214 SVRANGLRLGCKGYRVEALQKRLNDLGY---PVAIDSDYGPDTRSAIFSFQADHNLEVDG 270

Query: 156 MVDSSTLEAMNV 167
           +V + T EA++V
Sbjct: 271 VVGTKTQEALDV 282


>gi|301064267|ref|ZP_07204710.1| putative secretion ATPase, PEP-CTERM locus family protein [delta
           proteobacterium NaphS2]
 gi|300441712|gb|EFK06034.1| putative secretion ATPase, PEP-CTERM locus family protein [delta
           proteobacterium NaphS2]
          Length = 521

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S +V  L+E L   G L    G    FD      VK FQ   GL+  G+V   T
Sbjct: 450 LKQGMRSPAVFTLQEILKDLGYLVTLNGN---FDQQTLEEVKRFQDEFGLEADGVVGFRT 506

Query: 162 LEAM 165
           L  +
Sbjct: 507 LTLL 510


>gi|149187438|ref|ZP_01865736.1| hypothetical protein VSAK1_17982 [Vibrio shilonii AK1]
 gi|148838974|gb|EDL55913.1| hypothetical protein VSAK1_17982 [Vibrio shilonii AK1]
          Length = 303

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 71/197 (36%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L   E +  +     V +GR+ + TP + ++I+++   P W  P SI +K+
Sbjct: 94  IVINLAELRLYYFEPDKNLVHIFPVGIGRIGQDTPEMTTKISQLREAPTWTPPTSI-RKE 152

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +A   + P+ +                                    G  N +    + 
Sbjct: 153 YLAKGVELPKVV----------------------------------PAGPENPLGDYAMR 178

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                 +Y +H T +   F   +R  ++GC+R+ +  D+  WL        +  I +   
Sbjct: 179 LAYGTGSYLIHGTNKD--FGIGLR-VSAGCIRM-DPKDI-DWLFHQAKVGMQVRIID--- 230

Query: 374 TRKTTPVKLATEVPVHF 390
             +   + L  +  V  
Sbjct: 231 --EPIKIALEPDRSVFI 245


>gi|159901703|ref|YP_001547949.1| peptidoglycan binding domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159894742|gb|ABX07821.1| Peptidoglycan-binding domain 1 protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 306

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 8/69 (11%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  GN    V+ L+  L I  D          F     +AVK FQ R GL   G+V  +
Sbjct: 35  TLSKGNRGTDVKALQYLLAIDAD--------GVFGDATVTAVKRFQGRKGLTADGIVGPA 86

Query: 161 TLEAMNVPV 169
           T +A+   V
Sbjct: 87  TWDALTETV 95



 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 5/152 (3%)

Query: 14  FFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE 73
            F+ L+  +  S       A      +++             LA    G+  D  + + +
Sbjct: 10  IFLLLVGFLVSSQSSAHAIAGAFFHTLSKGNRGTDVKALQYLLAIDADGVFGDATVTAVK 69

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
              Q  K +     I+    W  L    +  G+S  +V+ ++  L           +   
Sbjct: 70  RF-QGRKGLTA-DGIVGPATWDAL-TETVRPGDSGNAVKAIQTELNAKH--KAGLTVDGK 124

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           F A  E AVK FQ   G+   G+V S+T + +
Sbjct: 125 FGAGTEQAVKQFQRHVGITADGIVGSTTWKQL 156


>gi|238782569|ref|ZP_04626600.1| hypothetical protein yberc0001_22190 [Yersinia bercovieri ATCC
           43970]
 gi|238716496|gb|EEQ08477.1| hypothetical protein yberc0001_22190 [Yersinia bercovieri ATCC
           43970]
          Length = 355

 Score = 60.2 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 70/208 (33%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+   +   + +G++ R TP + + +++ + NP W
Sbjct: 91  MLLPDTPREGIVINLAELRLYYYPKGQNKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTW 150

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL                         E          G 
Sbjct: 151 T-PTANIRK----------HYLA------------------------EGVTLPAVVPAGP 175

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L K  P  
Sbjct: 176 ENPMGLFAMRLAAGGGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-EALFKSVPKG 230

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 231 TRVQIINEPVKYSVEPDGKRYVEVHQPL 258


>gi|313499594|gb|ADR60960.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida BIRD-1]
          Length = 325

 Score = 60.2 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 44/170 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    +     G+ V     + +GR    +PI +++I     NP W  P SI +K+
Sbjct: 100 IVINLAEYRMYYFPKGESVVYTFPLGIGREGWGSPIANTKITAKTPNPTWTPPASI-RKE 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++ +          G  N +   K  
Sbjct: 159 ----------------------------------HAEDGDILPTVVPAGPDNPLGPFKFT 184

Query: 315 FYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                     H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 185 LGVPGYLI--HGSNKK--FGIGMRT-SHGCFRMFNNNVLELSKMVPVGTP 229


>gi|302562363|ref|ZP_07314705.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
 gi|302479981|gb|EFL43074.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
          Length = 112

 Score = 60.2 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVDS 159
           L  G+S   V  L+ERL+   D+  S      +DA + +AV  FQ+ +G+     G+   
Sbjct: 38  LREGDSGPEVAELQERLLRIPDVYRSGAPDGRYDATLSAAVARFQLWYGVRGDETGVYGD 97

Query: 160 STLEAM 165
            T  A+
Sbjct: 98  DTRFAL 103


>gi|104781033|ref|YP_607531.1| hypothetical protein PSEEN1888 [Pseudomonas entomophila L48]
 gi|95110020|emb|CAK14725.1| conserved hypothetical protein; ErfK/YbiS/YcfS/YnhG family
           [Pseudomonas entomophila L48]
          Length = 325

 Score = 60.2 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 53/175 (30%), Gaps = 54/175 (30%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI---- 250
           V++N+    L     G+ V     + +GR    +PI +++I     NP W  P SI    
Sbjct: 100 VVINLAEYRLYYYPKGQGVVYTFPLGIGREGWGSPIANTKITAKTPNPTWTPPASIRAEH 159

Query: 251 -IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
               D++  +                                           G  N + 
Sbjct: 160 AADGDILPAVV----------------------------------------PAGPDNPLG 179

Query: 310 STKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             K            H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 180 PFKFTLGVPGYLI--HGSNKK--FGIGMRT-SHGCFRMLNNNVLELSKMVPVGTP 229


>gi|168185528|ref|ZP_02620163.1| spore cortex-lytic enzyme [Clostridium botulinum C str. Eklund]
 gi|169296468|gb|EDS78601.1| spore cortex-lytic enzyme [Clostridium botulinum C str. Eklund]
          Length = 241

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 4/89 (4%)

Query: 81  AIAFYQDILSR--GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            +  Y  I       +  +       G+ +  V  ++ RL      +        ++ Y+
Sbjct: 17  MLFSYASIPQHVIPYFNSIKTSVYKYGSKNNIVTEIQRRLKAWDYYEGELDGKYGYETYL 76

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             AVK FQ ++GL   G+V  STL ++ +
Sbjct: 77  --AVKDFQRKNGLIVDGIVGDSTLASLGI 103


>gi|118470609|ref|YP_889561.1| gp35 protein [Mycobacterium smegmatis str. MC2 155]
 gi|118171896|gb|ABK72792.1| gp35 protein [Mycobacterium smegmatis str. MC2 155]
          Length = 275

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 95  PELPIRP-----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           P +P+       L+       V  L+ RL   G       +   F    E+AV+ FQ R 
Sbjct: 200 PRVPVGEYIDVLLYRPMEGAEVAELQRRLNALG---ADLVVDGIFGPLTEAAVRDFQRRT 256

Query: 150 -GLDPSGMVDSSTLEAMN 166
            GL   G+V  +T  A+N
Sbjct: 257 PGLKVDGIVGPATAAALN 274


>gi|148548657|ref|YP_001268759.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida F1]
 gi|148512715|gb|ABQ79575.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida F1]
          Length = 325

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 44/170 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    +     G+ V     + +GR    +PI +++I     NP W  P SI +K+
Sbjct: 100 IVINLAEYRMYYFPKGESVVYTFPLGIGREGWGSPIANTKITAKTPNPTWTPPASI-RKE 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++ +          G  N +   K  
Sbjct: 159 ----------------------------------HAEDGDILPTVVPAGPDNPLGPFKFT 184

Query: 315 FYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                     H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 185 LGVPGYLI--HGSNKK--FGIGMRT-SHGCFRMLNNNVLELSKMVPVGTP 229


>gi|284046013|ref|YP_003396353.1| transglycosylase [Conexibacter woesei DSM 14684]
 gi|283950234|gb|ADB52978.1| Transglycosylase domain protein [Conexibacter woesei DSM 14684]
          Length = 224

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L  G+S   V +L+++L +  D         AF    E AV+ +Q + GL   G+V  
Sbjct: 72  GVLKKGSSGPVVVQLQQKLGVPAD--------GAFGPQTERAVRRYQKQKGLGVDGVVGP 123

Query: 160 STLEAMNVPVDLRIRQ 175
            T  A+ + +     Q
Sbjct: 124 QTASALGISLATAQAQ 139


>gi|251789311|ref|YP_003004032.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
 gi|247537932|gb|ACT06553.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
          Length = 333

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 67/211 (31%), Gaps = 48/211 (22%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           ++ LL        ++VN+    L     GK   +   + +G++ R TP++ + +     N
Sbjct: 88  LQMLLP-DTPREGIVVNLAELRLYYFPKGKNTVIVYPIGIGQLGRNTPVMVTHVIERRPN 146

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W           +        Y K+  I +                            
Sbjct: 147 PTW-----------IPTANTRRHY-KEQGITL-----------------------PAVVP 171

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            G  N M    +        Y +H T     F   +R  +SGC+R+    D+   L  D 
Sbjct: 172 GGPDNPMGLFALRLEKSGGVYSIHGTNAD--FGIGMR-VSSGCIRL-RPEDI-EALFNDV 226

Query: 361 PTWSR-----YHIEEVVKTRKTTPVKLATEV 386
           P  +R       I+  V+      V++   +
Sbjct: 227 PVGTRVQIINEPIKIAVEPDGKRYVEVHQPL 257


>gi|238753642|ref|ZP_04615004.1| hypothetical protein yruck0001_13730 [Yersinia ruckeri ATCC 29473]
 gi|238708194|gb|EEQ00550.1| hypothetical protein yruck0001_13730 [Yersinia ruckeri ATCC 29473]
          Length = 346

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+   +   + +G++ R TP + + +++ + NP W
Sbjct: 91  MLLPDTPREGIVINLAELRLYYYPKGQDKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTW 150

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL                                    G 
Sbjct: 151 T-PTANIRK----------HYLAQ------------------------GVTLPAVVPAGP 175

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L    P  
Sbjct: 176 ENPMGLFAMRLAAGGGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-QALFSSVPKG 230

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       I+  V+      V++   +
Sbjct: 231 TRVQVINEPIKYSVEPDGKRYVEVHQPL 258


>gi|325274314|ref|ZP_08140422.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas sp. TJI-51]
 gi|324100552|gb|EGB98290.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas sp. TJI-51]
          Length = 325

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 58/182 (31%), Gaps = 45/182 (24%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        V++N+    L     G+ V     + +GR    +PI +++I     NP
Sbjct: 89  RYILPPGPREG-VVINLAEYRLYYYPKGQNVVYTFPLGIGREGWGSPIANTKIIAKTPNP 147

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI +K+                                  ++ +          
Sbjct: 148 TWTPPASI-RKE----------------------------------HAADGDILPAVVPA 172

Query: 303 GKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKD 359
           G  N +   K            H + +   F   +R  + GC R+   N+++L   +   
Sbjct: 173 GPDNPLGPFKFTLGVPGYLI--HGSNKK--FGIGMRT-SHGCFRMLNNNVLELSKLVPVG 227

Query: 360 TP 361
           TP
Sbjct: 228 TP 229


>gi|114564147|ref|YP_751661.1| peptidoglycan binding domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114335440|gb|ABI72822.1| Peptidoglycan-binding domain 1 protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 557

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 94  WPELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W    I P  +G SS    VQ L   L +         L   FD+ +E  +  FQ +HGL
Sbjct: 468 WQPDSILPREIGQSSSLAQVQWLENSLALVN--KRRARLLTQFDSELEQQLMTFQRQHGL 525

Query: 152 DPSGMVDSSTLEAMN 166
            P G+  + TL  +N
Sbjct: 526 KPDGIAGNQTLVQLN 540


>gi|295445961|gb|ADG21908.1| amidase [Providencia sp. WRB4]
          Length = 268

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 52/151 (34%), Gaps = 33/151 (21%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 98  MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQQALDKGQL 144

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +     E  +A    +     WP+L  +  L  G  S  V
Sbjct: 145 PTFVAGLAPQH--------PQYAVMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 193

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             LRE L  +G LD    +++  D     AV
Sbjct: 194 PALREILQRTGMLDGGPKITLPGDDTPTDAV 224


>gi|302390285|ref|YP_003826106.1| Peptidoglycan-binding domain 1 protein [Thermosediminibacter oceani
           DSM 16646]
 gi|302200913|gb|ADL08483.1| Peptidoglycan-binding domain 1 protein [Thermosediminibacter oceani
           DSM 16646]
          Length = 486

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L LG+    V+ L+  L   G       +   F     +AVK FQ ++GL   G+V  
Sbjct: 84  RLLALGSYGQDVKLLQTMLNQRGY---KLKVDGIFGPKTLAAVKDFQKKNGLKVDGIVGP 140

Query: 160 STLEAM 165
            TL  +
Sbjct: 141 KTLAKL 146


>gi|328954552|ref|YP_004371886.1| Peptidoglycan-binding domain 1 protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328454876|gb|AEB10705.1| Peptidoglycan-binding domain 1 protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 524

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG-LSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            + L LG     V  L++RL    DL    G L   FD+  E+AV  FQ    L   G+V
Sbjct: 180 AQALQLGAKGSEVLELQKRLK---DLRFDPGRLDGVFDSGTEAAVVAFQKSEDLLADGIV 236

Query: 158 DSSTLEAM 165
              TL A+
Sbjct: 237 GPKTLAAL 244



 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G S   V+ L+++L   G       L   F    E AV  FQ    LD  G+    T
Sbjct: 259 LQVGASGPHVEALQKQLAALGF--DPGPLDGVFGEKTERAVLAFQESRELDADGIAGPQT 316

Query: 162 LEAM 165
           + A+
Sbjct: 317 MAAL 320


>gi|291441499|ref|ZP_06580889.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces ghanaensis
           ATCC 14672]
 gi|291344394|gb|EFE71350.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces ghanaensis
           ATCC 14672]
          Length = 245

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G S   V +L+ RL           +  +F     +A+K FQ  +GL   G+  
Sbjct: 39  TRTLSQGASGADVTQLQIRLGGYPGYGSVLAVDGSFGPATAAALKRFQSAYGLTADGVAG 98

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 99  PNTYSKL 105


>gi|253682164|ref|ZP_04862961.1| spore cortex-lytic enzyme [Clostridium botulinum D str. 1873]
 gi|253561876|gb|EES91328.1| spore cortex-lytic enzyme [Clostridium botulinum D str. 1873]
          Length = 238

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +       G     V  ++ RL      +        ++ Y+  AVK FQ ++ L   G
Sbjct: 34  AVKTSVYKYGTKDSIVTEIQRRLKAWDYYNGELDGKYGYETYL--AVKEFQRKNDLTVDG 91

Query: 156 MVDSSTLEAMNV 167
           +V   TL A+ +
Sbjct: 92  IVGDYTLAALGI 103


>gi|239933149|ref|ZP_04690102.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           ghanaensis ATCC 14672]
          Length = 225

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G S   V +L+ RL           +  +F     +A+K FQ  +GL   G+  
Sbjct: 19  TRTLSQGASGADVTQLQIRLGGYPGYGSVLAVDGSFGPATAAALKRFQSAYGLTADGVAG 78

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 79  PNTYSKL 85


>gi|238787126|ref|ZP_04630926.1| hypothetical protein yfred0001_6120 [Yersinia frederiksenii ATCC
           33641]
 gi|238724914|gb|EEQ16554.1| hypothetical protein yfred0001_6120 [Yersinia frederiksenii ATCC
           33641]
          Length = 355

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 70/208 (33%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+   +   + +G++ R TP + + +++ + NP W
Sbjct: 91  MLLPDTPREGIVINLAELRLYYYPKGQNKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTW 150

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL                         E          G 
Sbjct: 151 T-PTANIRK----------HYLA------------------------EGVTLPAVVPAGP 175

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L K  P  
Sbjct: 176 ENPMGLFAMRLAAGGGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-EALFKSVPKG 230

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 231 TRVQIINEPVKYSVEPDGKRYVEVHQPL 258


>gi|123442427|ref|YP_001006406.1| hypothetical protein YE2166 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332161649|ref|YP_004298226.1| hypothetical protein YE105_C2027 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|122089388|emb|CAL12236.1| putative exported protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318605859|emb|CBY27357.1| L,D-transpeptidase YcfS [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325665879|gb|ADZ42523.1| hypothetical protein YE105_C2027 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861432|emb|CBX71658.1| uncharacterized protein ycfS [Yersinia enterocolitica W22703]
          Length = 355

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+   +   + +G++ R TP + + +++ + NP W
Sbjct: 91  MLLPDTPREGIVINLAELRLYYYPKGQNKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTW 150

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
               +I                   +                   + E          G 
Sbjct: 151 TPTANI-----------------RKHY------------------AAEGVTLPAVVPAGP 175

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L K  P  
Sbjct: 176 ENPMGLFAMRLAAGGGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-EALFKAVPKG 230

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 231 TRVQIINEPVKYSVEPDGKRYVEVHQPL 258


>gi|238791662|ref|ZP_04635299.1| hypothetical protein yinte0001_13750 [Yersinia intermedia ATCC
           29909]
 gi|238728766|gb|EEQ20283.1| hypothetical protein yinte0001_13750 [Yersinia intermedia ATCC
           29909]
          Length = 355

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 71/212 (33%), Gaps = 55/212 (25%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV-----GRVDRQTPILHSRINRIMF 240
           +L        +++N+    L     G+    S VIV     G++ R TP + + +++ + 
Sbjct: 91  MLLPDTPREGIVINLAELRLYYYPKGQ----SKVIVYPIGIGQLGRNTPTMTTSVSQKIP 146

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W  P + I+K  +A     P  +                                  
Sbjct: 147 NPTWT-PTANIRKHYLAQGVTLPSVV---------------------------------- 171

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
             G  N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L   
Sbjct: 172 PAGPENPMGLFAMRLSAGGGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-KALFSS 226

Query: 360 TPTWSRYHI-----EEVVKTRKTTPVKLATEV 386
            P  +R  I     +  V+      V++   +
Sbjct: 227 VPKGTRVQIVNEPVKYSVEPDGKRYVEVHQPL 258


>gi|302873222|ref|YP_003841855.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|307688611|ref|ZP_07631057.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|302576079|gb|ADL50091.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
          Length = 508

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 17/100 (17%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L LG+S  +V+ L+  L   G    +KG    F     +AV  FQ   GL   G+V 
Sbjct: 121 ASALKLGSSGEAVKELQVNLTKLGF--DTKGTDGVFGQNTYNAVVAFQNSRGLTADGIVG 178

Query: 159 SST-------LEAMN--------VPVDLRIRQLQVNLMRI 183
            +T       + A+N              + QLQVNL R+
Sbjct: 179 LNTKNAIDTAISALNNPSLALKIGSSGDEVIQLQVNLTRL 218



 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L +G+S   V +L+  L   G    + G    F      AV  FQ   GL   G+V
Sbjct: 195 PSLALKIGSSGDEVIQLQVNLTRLGY--DTNGADGVFGQNTYDAVVAFQTAKGLTADGIV 252

Query: 158 DSSTLEAM 165
            ++T  A+
Sbjct: 253 GAATKNAI 260



 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 14/139 (10%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQ 112
           N +  +   +       + +T  +T+ A A    + +      L I   L  G++   V 
Sbjct: 4   NLINSISALLSGTSNTSATKTANETKTATATANLVAAASTSDSLSISGTLQKGSTGQEVM 63

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN------ 166
            L+  L   G    +      F    +SAV  FQ   GL   G+V + T  A++      
Sbjct: 64  DLQNALKKLGYFTSTVDGD--FGDLTKSAVIKFQAAKGLTQDGIVGTETKAAISDALTAA 121

Query: 167 -----VPVDLRIRQLQVNL 180
                      +++LQVNL
Sbjct: 122 SALKLGSSGEAVKELQVNL 140


>gi|254410280|ref|ZP_05024060.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
 gi|196183316|gb|EDX78300.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
          Length = 337

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 10/153 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNF----LARVDMGIDSDIPIISKETI 75
           L + ++L    + +S    +++ +   +            ++ +  G   ++  +  +  
Sbjct: 46  LALAIALSSLSVTSSAWAAVVDTNGSPLNVRSGPGLGYGVVSTLANGTTINLSGLDADGW 105

Query: 76  AQTEKA--IAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           +Q      +A  + +    G   +P    L  G++  +V  L+ RL   G  +    ++ 
Sbjct: 106 SQLSNGNWVAS-RWVQGENGGSTVPSSAVLRPGSTGTAVTNLQNRLQEVGVYNG--PVTG 162

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +    E+AV+  Q   GL P G+  S+TL A+
Sbjct: 163 YYGRLTEAAVRTVQASEGLTPDGIAGSTTLTAL 195


>gi|167622957|ref|YP_001673251.1| peptidoglycan-binding domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167352979|gb|ABZ75592.1| Peptidoglycan-binding domain 1 protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 537

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 94  WPELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +P  +G S+    +Q L   L    D  P   L   FD  +E  +K FQ +HGL
Sbjct: 448 WQAPQHQPKEIGQSANQAQIQWLENSLARITDTPP--RLVSHFDPQLEQKLKAFQRQHGL 505

Query: 152 DPSGMVDSSTLEAMN 166
              G+  + TL  +N
Sbjct: 506 IADGIAGTQTLVQLN 520


>gi|290955225|ref|YP_003486407.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces scabiei 87.22]
 gi|260644751|emb|CBG67836.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces scabiei 87.22]
          Length = 249

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLF 145
                W     R ++ G+S   V  L+ R+       PS    G+   F     +AV+ F
Sbjct: 35  AQAYAW----SRTMNQGDSGADVTELQVRVAGWAADSPSHSRVGVDGDFGPGTAAAVRRF 90

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q  +GL   G+   +T   +N
Sbjct: 91  QAAYGLTADGVAGPNTQAKLN 111


>gi|258513404|ref|YP_003189626.1| spore cortex-lytic enzyme [Desulfotomaculum acetoxidans DSM 771]
 gi|257777109|gb|ACV61003.1| spore cortex-lytic enzyme [Desulfotomaculum acetoxidans DSM 771]
          Length = 242

 Score = 60.2 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH G+S   V ++++RL   G  +    +   F      AV+ FQ  +GL   G+V   T
Sbjct: 41  LHWGSSGYRVTKIQQRLNWWGYYEG--PVDGLFGTKTSKAVRKFQGYNGLSKDGVVGRQT 98

Query: 162 LEAM 165
           L A+
Sbjct: 99  LTAL 102


>gi|26989044|ref|NP_744469.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida KT2440]
 gi|24983869|gb|AAN67933.1|AE016425_10 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 325

 Score = 60.2 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 44/170 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    +     G+ V     + +GR    +PI ++RI     NP W  P SI +K+
Sbjct: 100 IVINLAEYRMYYFPKGESVVYTFPLGIGREGWGSPIANTRITAKTPNPTWTPPASI-RKE 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++ +          G  N +   K  
Sbjct: 159 ----------------------------------HAEDGDILPTVVPAGPDNPLGPFKFT 184

Query: 315 FYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                     H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 185 LGVPGYLI--HGSNKK--FGIGMRT-SHGCFRMFNNNVLELSKMVPVGTP 229


>gi|298492482|ref|YP_003722659.1| peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
 gi|298234400|gb|ADI65536.1| Peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
          Length = 249

 Score = 60.2 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 7/72 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           GWP      L LGN    V +L++ L   G L  S      F    E+AVK  Q+R+GL 
Sbjct: 176 GWPI-----LRLGNRGSEVVKLQKLLQNLGFLKGSIDGD--FGITTEAAVKAAQIRYGLQ 228

Query: 153 PSGMVDSSTLEA 164
           P G+   +T EA
Sbjct: 229 PDGIAGGATWEA 240



 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+    V  L+  L + G    +  +   +      AV  F+   GL+P G+VD+ 
Sbjct: 41  TLKVGSQGERVSELQAALKLLGFYTGA--VDGVYQEATARAVSQFKQAAGLNPDGVVDAI 98

Query: 161 TLEAM--NVP 168
           T + +  NV 
Sbjct: 99  TWQKLFPNVS 108


>gi|147679188|ref|YP_001213403.1| hypothetical protein PTH_2853 [Pelotomaculum thermopropionicum SI]
 gi|146275285|dbj|BAF61034.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 269

 Score = 60.2 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   V R+++RL   G       L   +      AV+ FQ+ +GL P G+V  +T +A
Sbjct: 77  GTSGDDVYRVQQRLSQWGYYTG--PLDGFYGYETFRAVQDFQINNGLPPDGVVGQATWDA 134

Query: 165 MNVPVDL 171
           + + V  
Sbjct: 135 LGLSVPE 141


>gi|146296750|ref|YP_001180521.1| cell wall hydrolase, SleB [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410326|gb|ABP67330.1| cell wall hydrolase, SleB [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 226

 Score = 60.2 bits (145), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G++   V  ++ RL   G  D        +  Y+  AV+ FQ ++GL   G+  S TL 
Sbjct: 40  YGSTGSEVIEIQRRLKQWGYYDGPIDGIYGYKTYM--AVRYFQAKNGLKVDGIAGSETLR 97

Query: 164 AMNV 167
           A+ +
Sbjct: 98  ALGI 101


>gi|292670826|ref|ZP_06604252.1| endopeptidase [Selenomonas noxia ATCC 43541]
 gi|292647447|gb|EFF65419.1| endopeptidase [Selenomonas noxia ATCC 43541]
          Length = 246

 Score = 59.8 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +      +G+    V  ++ +L   G    + G    F      AVK FQ  +GL   GM
Sbjct: 47  VSAESFQIGDQGTDVAEIQGQLSSFGYDVVADGD---FGPATAEAVKEFQAANGLAVDGM 103

Query: 157 VDSSTLEAM 165
           V   T +A+
Sbjct: 104 VGPVTYQAL 112


>gi|121533822|ref|ZP_01665649.1| NLP/P60 protein [Thermosinus carboxydivorans Nor1]
 gi|121307813|gb|EAX48728.1| NLP/P60 protein [Thermosinus carboxydivorans Nor1]
          Length = 233

 Score = 59.8 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 95  PELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P  P+ P L  G +   V  L+ +L+  G    ++ +   F      AV  FQ   GL+P
Sbjct: 25  PVEPLPPILKPGMAGEEVAYLQAKLLELGYY--TEAVDGKFGIQTRLAVMRFQQATGLEP 82

Query: 154 SGMVDSSTLEAM 165
            G+V + T +A+
Sbjct: 83  DGVVGALTWQAI 94


>gi|205373687|ref|ZP_03226490.1| hypothetical protein Bcoam_10670 [Bacillus coahuilensis m4-4]
          Length = 355

 Score = 59.8 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++L+E LI  G      G    + +  + AV  FQ  +GL   G+    T
Sbjct: 202 LLFGDKGADVKKLQESLIRLGYPLTKFGADGDYGSETKQAVMNFQKANGLPVDGIAGIQT 261

Query: 162 LEAMNVPVDLRIRQLQV 178
           ++ +N  +D +   ++ 
Sbjct: 262 MKKVNELLDAKKVTIEA 278



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 30/67 (44%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + L +G+   +V  L++ L   G   P  G    F    E AVK  Q  +GL   
Sbjct: 116 PSTSNQNLSIGSVGSNVMMLQQNLQKLGYSLPKYGSDGTFGQETEDAVKQLQRDNGLIID 175

Query: 155 GMVDSST 161
           G+V S+T
Sbjct: 176 GIVGSNT 182



 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL+ G+    V+ ++  LI  G   P  G    + A     V+ FQ  + L   G+V  +
Sbjct: 40  PLNNGDRGDLVREVQNDLIKLGYSLPLYGADGFYGAETIQQVRKFQKDYYLTVDGIVGEN 99

Query: 161 TLEAM 165
           T +A+
Sbjct: 100 TFKAL 104



 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRH-GLDP 153
            LP   L  G+   +V+++++ L    DL  + G     +    E AV+ FQ  +  L  
Sbjct: 281 PLPNVILKQGSEGNNVKQVQQALK---DLKLNVGTVDGIYGPKTEKAVRDFQSNYPTLKN 337

Query: 154 SGMVDSSTLEAM 165
            G+   +T + M
Sbjct: 338 DGIYGPNTRKYM 349


>gi|17228662|ref|NP_485210.1| lysin [Nostoc sp. PCC 7120]
 gi|17130513|dbj|BAB73124.1| lysin [Nostoc sp. PCC 7120]
          Length = 242

 Score = 59.8 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G+    V  L+E LI     DP +     F    E+AVK FQ R  + P G+V+
Sbjct: 4   TETLRKGSKGSDVSELQEILIKLKF-DPGRIDGD-FGNKTEAAVKQFQQRQSITPDGVVE 61

Query: 159 SSTLEAMNVPVDLRIRQLQV 178
            +T  A+N  +  +I   ++
Sbjct: 62  INTRNALNKAIQRQIEIAKL 81


>gi|296141898|ref|YP_003649141.1| cell wall hydrolase/autolysin [Tsukamurella paurometabola DSM
           20162]
 gi|296030032|gb|ADG80802.1| cell wall hydrolase/autolysin [Tsukamurella paurometabola DSM
           20162]
          Length = 395

 Score = 59.8 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 11/75 (14%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL-----------SVAFDAYVESAVKLFQMRHG 150
           + LG+   +V  +R  L   G L                    FD  ++ A + FQ + G
Sbjct: 4   ISLGDHGGAVAEIRGILADQGFLPDYVAPRELVSNGWTLPEAVFDRRLDHATRAFQQQRG 63

Query: 151 LDPSGMVDSSTLEAM 165
           L   G+V  +T  A+
Sbjct: 64  LLVDGVVGPATYRAL 78



 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSV----SVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           A Y+ +       +L  R L    S+      V  L+ RL   G    +  +   F    
Sbjct: 73  ATYRALREST--YQLGARTLSYIASAPPSGDDVAALQARLQNLGFY--AGMIDGLFGPQT 128

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              +  +Q   GL   G+   +TL ++
Sbjct: 129 HLGLSAYQREFGLVADGICGPATLRSL 155


>gi|120404350|ref|YP_954179.1| peptidoglycan binding domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119957168|gb|ABM14173.1| Peptidoglycan-binding domain 1 protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 283

 Score = 59.8 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 95  PELPIRP-----LHLGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           P +P+       L+ G     V  L+ RL            +   F    ESAV+ FQ R
Sbjct: 199 PPVPVGEYADVLLYRGVRGPQVAELQRRLRYAYASYAGGLEIDGVFGPETESAVREFQRR 258

Query: 149 H-GLDPSGMVDSSTLEAM 165
             GL   G+V  +T  A+
Sbjct: 259 TPGLKVDGVVGPATAAAL 276


>gi|239828434|ref|YP_002951058.1| NLP/P60 protein [Geobacillus sp. WCH70]
 gi|239808727|gb|ACS25792.1| NLP/P60 protein [Geobacillus sp. WCH70]
          Length = 454

 Score = 59.8 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             L    L +G+    V +L+++L   G       ++  +  +   AV+ FQ ++ L  +
Sbjct: 176 KTLQANALKIGSRGTEVSKLQQKLKQLGYFT-YPEITDYYGTFTAEAVRKFQEKNKLPVT 234

Query: 155 GMVDSSTLEAMN 166
           G+ DS+TL  +N
Sbjct: 235 GVADSATLAKIN 246



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               + +G+   +V+ L++ L + G       ++  +    + AVK FQ  +GL  +G+ 
Sbjct: 100 STAEMKIGSRGNNVKVLQQNLKLLGYF-RYPEITGYYGVITQEAVKKFQRNNGLSATGVA 158

Query: 158 DSSTLEAM-NVPVDLRIRQLQVNL 180
           D+ T++ + N       + LQ N 
Sbjct: 159 DARTVQLIQNAVNKQSNKTLQANA 182



 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G SS  ++ L++ L   G        +  F    E AVK FQ    L  +G+VD +T 
Sbjct: 33  KVGMSSPQIKELQQLLKEKGFFT-YPTATGYFGTITEQAVKAFQASVRLPVTGIVDDATY 91

Query: 163 EAMNVPVDLRIR 174
             +         
Sbjct: 92  AKLKGAAASTAE 103



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V+ ++ +L   G    S+ ++  +     +AVK FQ    L  +G+VD+ T
Sbjct: 265 LTTGSTGSEVKEVQTKLKQLGYFTYSQ-ITGYYGTITANAVKSFQRDVNLKATGVVDTET 323

Query: 162 LEAMNVPVDLR 172
            E +      R
Sbjct: 324 YERLMGKAPQR 334


>gi|34497388|ref|NP_901603.1| hypothetical protein CV_1933 [Chromobacterium violaceum ATCC 12472]
 gi|34103244|gb|AAQ59607.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 301

 Score = 59.8 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 39/165 (23%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R++++N+P A L   ++GK+     V VG++  QTP     I  I   P W +P+SI Q+
Sbjct: 35  RHLVLNLPQARLFLYQDGKLARIFPVAVGKMLTQTPTGSFDITGIYRAPSWHVPKSI-QE 93

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +M                      GKEV        +        R   G+ +++     
Sbjct: 94  EM-------------------RRSGKEVQTVVPPGPNNPLGPVFVR--FGE-SSLGLG-- 129

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
                     H T  P    +V  F + GCVR+   + ++L   +
Sbjct: 130 ---------FHGTNAPG---SVPGFRSHGCVRLRNDDALELARTV 162


>gi|294787984|ref|ZP_06753228.1| ErfK/YbiS/YcfS/YnhG family protein [Simonsiella muelleri ATCC
           29453]
 gi|294484277|gb|EFG31960.1| ErfK/YbiS/YcfS/YnhG family protein [Simonsiella muelleri ATCC
           29453]
          Length = 378

 Score = 59.8 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 58/186 (31%), Gaps = 43/186 (23%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           YVL+NIP   L    NG +     V VG+   QT +   +I    ++P W IP+SI  + 
Sbjct: 19  YVLINIPQQRLFLFNNGALEKVYPVAVGKAMTQTNLGEHKIGGKAYDPTWHIPKSIQAEM 78

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                          V      P   +F +      ++      
Sbjct: 79  KTPQ-------------------------TSVPPGPNNPLGPVFVRLGNPKLSLG----- 108

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEVV 372
                   +H T  P   N+V    + GCVR+     +D    +   +     Y +  + 
Sbjct: 109 --------IHGTNAP---NSVPGVRSHGCVRMKSEQALDFARTITTGSDALVGYEMAALN 157

Query: 373 KTRKTT 378
              K  
Sbjct: 158 VDGKNQ 163


>gi|119488463|ref|ZP_01621636.1| hypothetical protein L8106_23835 [Lyngbya sp. PCC 8106]
 gi|119455274|gb|EAW36414.1| hypothetical protein L8106_23835 [Lyngbya sp. PCC 8106]
          Length = 238

 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 17/101 (16%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           + S+     + + I  Y                L  G     V  L++RL I G  DP +
Sbjct: 65  LFSEPFYEGSSQPIRRY---------------TLEPGTRGTQVTGLQQRLQIHGF-DPGR 108

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
             S  F +  E AV+ FQ   GL+ +G+VD  T + +    
Sbjct: 109 VDS-VFGSRTEQAVRAFQQARGLEVNGIVDRGTWKLLETTP 148



 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 33/120 (27%)

Query: 77  QTEKAIAFYQD--------ILSRGGWPELPIRP-----------------------LHLG 105
           +TE+A+  +Q         I+ RG W  L   P                       L  G
Sbjct: 116 RTEQAVRAFQQARGLEVNGIVDRGTWKLLETTPRPVATAPRPVETAPRPVAVAQEVLTKG 175

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V+ L+ RL I G       +   F +  ++AV  +Q   GL+ +G+VD  T  A+
Sbjct: 176 TKGSKVRTLQTRLEIKGF--DPGPVDGVFGSRTQAAVIAYQQTKGLEVNGVVDEQTWVAL 233


>gi|302865629|ref|YP_003834266.1| peptidase M15A [Micromonospora aurantiaca ATCC 27029]
 gi|302568488|gb|ADL44690.1| Peptidase M15A [Micromonospora aurantiaca ATCC 27029]
          Length = 259

 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G S   V++L+ R+           +   +     +AVK FQ  +GL   G+   
Sbjct: 41  RMLSQGQSGSDVRQLQIRVAGWAAYGGIVRVDGVYGPETAAAVKRFQAAYGLRADGVAGP 100

Query: 160 STLE 163
            T  
Sbjct: 101 KTFA 104


>gi|295704404|ref|YP_003597479.1| autolytic lysozyme [Bacillus megaterium DSM 319]
 gi|294802063|gb|ADF39129.1| autolytic lysozyme [Bacillus megaterium DSM 319]
          Length = 298

 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+  + V+++++ L+  G   P  G    +   + +AVK FQ R+GL   G+  + TL
Sbjct: 227 GDRGLGVKQIQQNLLALGFSLPKFGADGFYGDELIAAVKKFQNRYGLFSDGIAGADTL 284


>gi|269104415|ref|ZP_06157111.1| hypothetical protein VDA_000572 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161055|gb|EEZ39552.1| hypothetical protein VDA_000572 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 300

 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 61/183 (33%), Gaps = 43/183 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAV--ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             +    V +N+    L     ++        + +GRV R+TP + + I++ + +P W  
Sbjct: 87  PNVPHNGVTINLAELRLYYFPKDDPSKVYVFPIGIGRVGRETPSMTTSISQKIRHPTWT- 145

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P + I+K+  A                                             G  N
Sbjct: 146 PTANIRKEYAAK----------------------------------GVTLPPVVAAGPNN 171

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            +    +     +  Y +H T +   F   +R  +SGC+R+ N  D+  WL    P  + 
Sbjct: 172 PLGDYAMRLAYGHGEYLIHSTNKD--FGIGMR-VSSGCIRM-NPWDI-EWLFPQIPKGTP 226

Query: 366 YHI 368
             I
Sbjct: 227 VRI 229


>gi|153868406|ref|ZP_01998357.1| hypothetical protein BGS_0497 [Beggiatoa sp. SS]
 gi|152144274|gb|EDN71643.1| hypothetical protein BGS_0497 [Beggiatoa sp. SS]
          Length = 147

 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 5/119 (4%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW--PELPIRPLHLGNS 107
            ++   + R+   +      +S +T     +AI  Y        W  P LP+  L +G S
Sbjct: 18  KQYLVVVTRLQNNVA--TLALSGQTFEFPIEAINEYWLGQFLVLWQPPTLPVPVLQVGIS 75

Query: 108 SVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           + SV  +R+ L  I G       LS  FD  +   V  FQ +  LDP G+V   TL A+
Sbjct: 76  NESVIWIRKLLDEIEGLRGEPHTLSPLFDYALRRRVIAFQRQQKLDPDGIVGEQTLLAL 134


>gi|138896743|ref|YP_001127196.1| cell wall lytic activity [Geobacillus thermodenitrificans NG80-2]
 gi|134268256|gb|ABO68451.1| Cell wall lytic activity [Geobacillus thermodenitrificans NG80-2]
          Length = 627

 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             R L +G     V+ L++RL   G       ++  F    E+AVK FQ  +GL  +G  
Sbjct: 98  TARTLSVGMRGDDVKVLQQRLKQLGYFK-YPEITGYFGTVTEAAVKQFQQANGLKVTGKA 156

Query: 158 DSSTLEAMNVPVDLRI 173
           D+ T+E +      + 
Sbjct: 157 DAVTIERLRQAASKQA 172



 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V  L++ L + G        +  +      AV+ FQ  +GL  +G VDS+T
Sbjct: 182 LKIGSRGSEVSELQKNLKLLGYFT-YPTATGYYGTITADAVRRFQKDNGLPATGSVDSTT 240

Query: 162 L 162
           L
Sbjct: 241 L 241



 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V++++  L   G       ++  +      AV+ FQ  +GL  +G VDS+T
Sbjct: 265 LKIGTRGEKVKQVQTNLKQLGYFT-YPEITGYYGTITADAVRRFQKDNGLPVTGSVDSTT 323



 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 4/99 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V+R++ +L   G       ++  +      AV+ FQ    L  +G+VDS T
Sbjct: 431 LTIGTRGEEVKRVQTKLKQLGYFT-YPEITGYYGTITADAVRRFQKDAKLQANGIVDSQT 489

Query: 162 LEAM--NVPVDL-RIRQLQVNLMRIKKLLEQKMGLRYVL 197
            E +    P    +    ++++M +     + +G  YV 
Sbjct: 490 YERLIGQAPASKGQASASKLDVMELIADAAELLGKPYVW 528



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G SS  V+ L++ L   G     +     F    E AV+ FQ    L  +G+VD +T 
Sbjct: 31  KVGMSSSKVKELQQLLKEKGFFSYPQATG-YFGPITEEAVRAFQKAANLPVTGVVDDATY 89

Query: 163 EAM 165
             +
Sbjct: 90  AKL 92



 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V++++  L   G       ++  +      AV+ FQ  +GL  +G VDS+T
Sbjct: 348 LKTGTRGEKVKQVQTNLKQLGYFT-YPEITGYYGTITADAVRRFQKDNGLPVTGSVDSTT 406


>gi|322384552|ref|ZP_08058232.1| spore cortex-lytic enzyme-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321150607|gb|EFX44084.1| spore cortex-lytic enzyme-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 216

 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 34/148 (22%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L++G  S  V  L+ERL   G     KG++  +    + AV+ FQ  +GL  +G  DS+
Sbjct: 31  TLNIGTQSEHVLNLQERLSSLGYFK--KGITGYYGKITKEAVRDFQKAYGLSVTGSADSA 88

Query: 161 TLEAMN---VPVDLRIRQLQVNLMRIKKLLEQKMGLRY---VLVNIPAASLEAVENGKVG 214
           TL  +N       + + QL       + +  +  G  +   V V            G V 
Sbjct: 89  TLAKLNQMAGSKQITLDQLA------RIIYAEARGESFKGQVAV------------GAVV 130

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNP 242
           L   V       Q+      I  ++F P
Sbjct: 131 LN-RV-------QSNAFPDSITEVIFQP 150


>gi|315502176|ref|YP_004081063.1| peptidase m15a [Micromonospora sp. L5]
 gi|315408795|gb|ADU06912.1| Peptidase M15A [Micromonospora sp. L5]
          Length = 259

 Score = 59.8 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G S   V++L+ R+           +   +     +AVK FQ  +GL   G+   
Sbjct: 41  RMLSQGQSGSDVRQLQIRVAGWAAYGGIVRVDGVYGPETAAAVKRFQAAYGLRADGVAGP 100

Query: 160 STLE 163
            T  
Sbjct: 101 KTFA 104


>gi|308068719|ref|YP_003870324.1| spore cortex-lytic enzyme precursor (Germination-specific amidase)
           [Paenibacillus polymyxa E681]
 gi|305857998|gb|ADM69786.1| Spore cortex-lytic enzyme precursor (Germination-specific amidase)
           [Paenibacillus polymyxa E681]
          Length = 283

 Score = 59.8 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            ++   P      +  G+    V  L+ RL + G       +   F +    AVK FQ  
Sbjct: 44  AAQPSQPTFSSGAVDFGSYGQDVYELQSRLKLLGFF--GGKVDSHFGSSTLKAVKGFQKE 101

Query: 149 HGLDPSGMVDSST-LEAMNVPVD 170
            G+ P G+V   T L+ +N   +
Sbjct: 102 FGIRPDGVVGPKTKLKLVNATPN 124


>gi|196249438|ref|ZP_03148136.1| NLP/P60 protein [Geobacillus sp. G11MC16]
 gi|196211195|gb|EDY05956.1| NLP/P60 protein [Geobacillus sp. G11MC16]
          Length = 544

 Score = 59.8 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             R L +G     V+ L++RL   G       ++  F    E+AVK FQ  +GL  +G  
Sbjct: 98  TARTLSVGMRGDDVKVLQQRLKQLGYFK-YPEITGYFGTVTEAAVKQFQQANGLKVTGKA 156

Query: 158 DSSTLEAM 165
           D+ T+E +
Sbjct: 157 DAVTIERL 164



 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+    V  L++ L + G        +  +      AV+ FQ  +GL  +G VDS+
Sbjct: 181 TLKIGSRGSEVSELQKNLKLLGYFT-YPTATGYYGTITADAVRRFQKDNGLPATGSVDST 239

Query: 161 TL 162
           TL
Sbjct: 240 TL 241



 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V++++  L   G       ++  +      AV+ FQ  +GL  +G VDS+T
Sbjct: 265 LKIGTRGEKVKQVQTNLKQLGYFT-YPEITGYYGTITADAVRRFQKDNGLPVTGSVDSTT 323



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G SS  V+ L++ L   G     +     F    E AV+ FQ    L  +G+VD +T 
Sbjct: 31  KVGMSSSKVKELQQLLKEKGFFSYPQATG-YFGPITEEAVRAFQKAANLPVTGVVDDATY 89

Query: 163 EAM 165
             +
Sbjct: 90  AKL 92



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 4/99 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V++++  L   G       ++  +      AV+ FQ    L  +G+VDS T
Sbjct: 348 LKTGTRGEKVKQVQTNLKQLGYFT-YPEITGYYGTITADAVRRFQKDAKLQANGIVDSQT 406

Query: 162 LEAM--NVPVDL-RIRQLQVNLMRIKKLLEQKMGLRYVL 197
            E +    P    +    ++++M +     + +G  YV 
Sbjct: 407 YERLIGQAPASKGQASASKLDVMELIADAAELLGKPYVW 445


>gi|158319047|ref|YP_001511555.1| cell wall hydrolase/autolysin [Frankia sp. EAN1pec]
 gi|158114452|gb|ABW16649.1| cell wall hydrolase/autolysin [Frankia sp. EAN1pec]
          Length = 409

 Score = 59.8 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 32/103 (31%), Gaps = 36/103 (34%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK------------------------------ 128
           ++ L LG+   SV   R   I  G L  +                               
Sbjct: 1   MKLLRLGDRDPSVAEARAAFIHLGFLPVAPRQTDAADGPGPGALETSTATGTGPSPAGDA 60

Query: 129 ------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                   +  FD  +++AV+ FQ   GL   G++   T  A+
Sbjct: 61  GNGGPVDATDQFDNELDNAVRAFQQSRGLSVDGIIGPDTFRAI 103



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 48/128 (37%), Gaps = 25/128 (19%)

Query: 48  VNDRFDNFLARVDMGID-----SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
             D+FDN L             S   II  +T    E+A               L  R L
Sbjct: 68  ATDQFDNELDNAVRAFQQSRGLSVDGIIGPDTFRAIEEARRR------------LGDRLL 115

Query: 103 HLGNSSV----SVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           H   +       V  L+ERL   G D+  + G    F A  +SAV+ FQ   GLDP G+ 
Sbjct: 116 HYSVTHPFVGDDVAALQERLSNMGFDVGRADG---IFGARTDSAVRDFQRNRGLDPDGLC 172

Query: 158 DSSTLEAM 165
              TL  +
Sbjct: 173 GPRTLREL 180


>gi|322421011|ref|YP_004200234.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M18]
 gi|320127398|gb|ADW14958.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M18]
          Length = 303

 Score = 59.8 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 58/195 (29%), Gaps = 48/195 (24%)

Query: 185 KLLEQ--KMGLRYVLVNIPAASLEAV--ENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            +     +     V+VN+    L     ++    L   + +G     TP+    I     
Sbjct: 92  WIPPAVSESERPSVVVNLAELRLFLFPKDSRSDILSFPIGIGDEGTDTPVGTYHIIEKTV 151

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           +PYW +P+SI ++                                        P      
Sbjct: 152 SPYWRVPKSIRRQ---------------------------------------RPELPGVV 172

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N + S  +   SR++  +H T  P          + GC+R+    D+     + +
Sbjct: 173 PPGPENPLGSHALRL-SRDSILIHGTNRPWGVGRRS---SHGCLRL-YPEDIAELFQRVS 227

Query: 361 PTWSRYHIEEVVKTR 375
                  I + VK  
Sbjct: 228 KGMRVTIINQPVKIG 242


>gi|78222403|ref|YP_384150.1| peptidoglycan binding domain-containing protein [Geobacter
           metallireducens GS-15]
 gi|78193658|gb|ABB31425.1| Peptidoglycan-binding domain 1 [Geobacter metallireducens GS-15]
          Length = 321

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                 G++   V+ ++ RL   G           F    ESAVK FQ ++GLD  G+V 
Sbjct: 2   TNAYRRGSTGAEVKTIQTRLAGLGLYSG--DTDGIFGGGTESAVKNFQRKNGLDVDGIVG 59

Query: 159 SSTLEAM 165
             T + +
Sbjct: 60  EDTWKKL 66


>gi|295705989|ref|YP_003599064.1| putative cell wall endopeptidase [Bacillus megaterium DSM 319]
 gi|294803648|gb|ADF40714.1| putative cell wall endopeptidase [Bacillus megaterium DSM 319]
          Length = 231

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G ++  V++++  L   G L     +S  F+   + AV  FQ +H L+  G+V  +T
Sbjct: 37  LKQGMTNDDVEQVKTVLKDKGFLKGE--VSRYFNYETKKAVMAFQEKHNLEADGVVGENT 94

Query: 162 LEAM 165
             A+
Sbjct: 95  YNAL 98


>gi|294500636|ref|YP_003564336.1| putative cell wall endopeptidase [Bacillus megaterium QM B1551]
 gi|294350573|gb|ADE70902.1| putative cell wall endopeptidase [Bacillus megaterium QM B1551]
          Length = 224

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G ++  V++++  L   G L     +S  F+   + AV  FQ +H L+  G+V  +T
Sbjct: 30  LKQGMTNDDVEQVKTVLKDKGFLKGE--VSRYFNYETKKAVMAFQEKHNLEADGVVGENT 87

Query: 162 LEAM 165
             A+
Sbjct: 88  YNAL 91


>gi|238757747|ref|ZP_04618930.1| hypothetical protein yaldo0001_35040 [Yersinia aldovae ATCC 35236]
 gi|238703990|gb|EEP96524.1| hypothetical protein yaldo0001_35040 [Yersinia aldovae ATCC 35236]
          Length = 351

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 70/208 (33%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+   +   + +G++ R TP + + +++ + NP W
Sbjct: 91  MLLPDTPREGIVINLAELRLYYYPKGQNKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTW 150

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K  +A     P  +                                    G 
Sbjct: 151 T-PTANIRKHYLAQGVTLPSVV----------------------------------PAGP 175

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L    P  
Sbjct: 176 ENPMGLFAMRLAAGRGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-QALFSTVPKG 230

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 231 TRVQIVNEPVKYSVEPDGKRYVEVHQPL 258


>gi|330503579|ref|YP_004380448.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina NK-01]
 gi|328917865|gb|AEB58696.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina NK-01]
          Length = 318

 Score = 59.5 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 46/171 (26%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L     G+ V     + +GR    +P+   R+     NP W  P+SI +++
Sbjct: 100 IVINLAEYRLYYFPKGQNVVHTFPLGIGREGWGSPLGVGRVTVKTPNPAWYPPKSI-REE 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++ +         PG  N +   K+ 
Sbjct: 159 ----------------------------------HAADGDILPTVVPPGPDNPLGPYKMT 184

Query: 315 --FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             F        H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 185 LSFP-GYLI--HGSNKK--FGIGMR-VSHGCFRMLNHNVLELADMVPVGTP 229


>gi|290967759|ref|ZP_06559312.1| NlpC/P60 family protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290782118|gb|EFD94693.1| NlpC/P60 family protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 323

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 21/106 (19%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA----- 164
            V+ +++ L+  G    +  +   F    E A++ FQ R GL   G++   T  A     
Sbjct: 120 EVRTIQQALVRQGY---AVDVDGVFGPGTEQALRRFQARRGLTVDGVIGPETFYALTGQV 176

Query: 165 -------------MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
                        +NV      R     + R+  + ++ MG  YV 
Sbjct: 177 LASGSVHVGNTAELNVAPTGSARSASATVRRLLGVAQRYMGTPYVF 222



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            H G+    +  +++ L+  G      G    + A  + A++ FQ +HG+   G++ + T
Sbjct: 25  FHPGDRGTQITEIQQALVKQGMHLAVDGD---YGADTQEAIRTFQKKHGIYADGVMGAKT 81

Query: 162 LEAM---NVPVDLRIR 174
              +   N+P +  IR
Sbjct: 82  YAVLMKKNMPENKTIR 97


>gi|311032631|ref|ZP_07710721.1| putative muramoyl-pentapeptide carboxypeptidase [Bacillus sp.
           m3-13]
          Length = 240

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLF 145
            S   W     R L  G+S   V+ L+ R+       P +    +   F    ++AV  F
Sbjct: 29  ASAYNW----TRTLSEGSSGTDVRELQIRVAGWAADSPQQTVVSVDGQFGPGTKAAVIRF 84

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q  +GL   G+V   T   +N
Sbjct: 85  QRAYGLTADGVVGPQTQAKLN 105


>gi|238749439|ref|ZP_04610944.1| hypothetical protein yrohd0001_27560 [Yersinia rohdei ATCC 43380]
 gi|238712094|gb|EEQ04307.1| hypothetical protein yrohd0001_27560 [Yersinia rohdei ATCC 43380]
          Length = 351

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 70/208 (33%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L    ++    +   + +G++ R TP + + +++ + NP W
Sbjct: 91  MLLPDTPREGIVINLAELRLYYYPKDQNKVVVYPIGIGQLGRNTPTMTTSVSQKIPNPTW 150

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL                         E          G 
Sbjct: 151 T-PTANIRK----------HYLA------------------------EGVTLPAVVPAGP 175

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L K  P  
Sbjct: 176 ENPMGLFAMRLAAGGGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-EALFKSVPKG 230

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 231 TRVQIINEPVKYSVEPDGKRYVEVHQPL 258


>gi|51894094|ref|YP_076785.1| spore cortex-lytic enzyme precursor [Symbiobacterium thermophilum
           IAM 14863]
 gi|51857783|dbj|BAD41941.1| spore cortex-lytic enzyme precursor [Symbiobacterium thermophilum
           IAM 14863]
          Length = 237

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V   + RL   G       +   +      AV LFQ R+GL   G+V   
Sbjct: 42  TLRWGSRGSDVCLAQRRLKAWGYYRGE--VDCIYGRLTYEAVTLFQRRNGLTVDGIVGPD 99

Query: 161 TLEAM 165
           T  A+
Sbjct: 100 TWAAL 104


>gi|17229661|ref|NP_486209.1| hypothetical protein alr2169 [Nostoc sp. PCC 7120]
 gi|17131260|dbj|BAB73868.1| alr2169 [Nostoc sp. PCC 7120]
          Length = 160

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 3/91 (3%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           E  I  Y+   +      + +  L  G+    V+ L++RL  +G           F    
Sbjct: 68  EDGIVGYKTWQALYEGRVIDLPILKYGSQGELVKALQQRLQNAGYYTGLVDGD--FSLVT 125

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM-NVP 168
           E+ VK FQ+R+ L   G+V   T   + N P
Sbjct: 126 EAGVKSFQLRNNLKVDGIVGDRTWAVLSNTP 156



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V+ L +RL+ S     S  +    D+     V LFQ R  +   G+V   
Sbjct: 18  TLKQGDTGEVVKEL-QRLLRS-YYCYSGPIDGVLDSETVGGVILFQHRVFIPEDGIVGYK 75

Query: 161 TLEAM 165
           T +A+
Sbjct: 76  TWQAL 80


>gi|331268737|ref|YP_004395229.1| spore-cortex-lytic enzyme [Clostridium botulinum BKT015925]
 gi|329125287|gb|AEB75232.1| spore-cortex-lytic enzyme [Clostridium botulinum BKT015925]
          Length = 221

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +       G     V  ++ RL      D        ++ Y+  AVK FQ ++ L   G
Sbjct: 17  AIKTSVYKYGTKDSIVTEIQRRLKAWDYYDGELDGKYGYETYL--AVKEFQRKNDLTVDG 74

Query: 156 MVDSSTLEAMNV 167
           +V   TL ++ +
Sbjct: 75  IVGDDTLASLGI 86


>gi|282866653|ref|ZP_06275695.1| Peptidase M15A [Streptomyces sp. ACTE]
 gi|282558555|gb|EFB64115.1| Peptidase M15A [Streptomyces sp. ACTE]
          Length = 245

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G +   V +L+ R+      +    +  ++     +AVK FQ  +GL   G+  
Sbjct: 39  TRTLSSGATGNDVTQLQIRVAGYPGYNSVLAVDGSYGPATTAAVKRFQAAYGLAADGVAG 98

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 99  PATQAKL 105


>gi|282600699|ref|ZP_06257697.1| putative cell wall lytic activity [Subdoligranulum variabile DSM
           15176]
 gi|282571458|gb|EFB76993.1| putative cell wall lytic activity [Subdoligranulum variabile DSM
           15176]
          Length = 508

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           S G WP +    L  G++   V++++     L       P+  +   F A  E AVK+FQ
Sbjct: 49  SSGSWPGV---VLKRGSTGSEVEQVQFWLSELAQFNSALPALTVDGNFGAATERAVKIFQ 105

Query: 147 MRHGLDPSGMVDSSTLEAM 165
              GL   G+V  +T EA+
Sbjct: 106 QEQGLTADGVVGQATWEAL 124



 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 9/127 (7%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEK------AIAFYQDILSRGGWPELPIRP 101
           V+  F     R   G  S   + +   + +         A+A   +I+     P      
Sbjct: 176 VDGNFGASTQRAVTGFQSLFGLTADGLVGRATWNKLNEVALAVANEIVEPNVAPGQFTTT 235

Query: 102 LHLGNSSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +  GN   +V+ ++    RL       PS  +   F +    AVK +Q R GL   G+V 
Sbjct: 236 VREGNRGTTVRAVQYYLRRLSAYYSDIPSVTVDGVFGSATTKAVKAWQARAGLTVDGVVG 295

Query: 159 SSTLEAM 165
             T  ++
Sbjct: 296 RLTWNSL 302



 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 50/144 (34%), Gaps = 13/144 (9%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
             S L +  +      V+  F     R       +  + +   + Q     A Y   L  
Sbjct: 73  WLSELAQFNSALPALTVDGNFGAATERAVKIFQQEQGLTADGVVGQATWE-ALYSAWLDM 131

Query: 92  ----GG--WPELPIRPLHLGNSSVSVQRLR--ERLIISGDLD-PSKGLSVAFDAYVESAV 142
               GG  WP +    L  G++ + V+ ++   RL         +  +   F A  + AV
Sbjct: 132 QSDLGGTAWPGI---VLRRGDTGMEVRLVQFWLRLAAENYSALAAVSVDGNFGASTQRAV 188

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMN 166
             FQ   GL   G+V  +T   +N
Sbjct: 189 TGFQSLFGLTADGLVGRATWNKLN 212



 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS---KGLSVAFDAYVESAVKLFQMR 148
           G WP      L LG+S  +V +++  L +   +D        +  FD   ++A++ +Q+ 
Sbjct: 418 GIWP---ASALTLGSSGPAVLQVQRWLNLIASVDQGYSFVPETGDFDDATQNALENYQLT 474

Query: 149 HGLDPSGMVDSSTLEAMNVPVDL 171
            GL   G+VD++T E++    + 
Sbjct: 475 AGLPTLGVVDAATWESLRTAAEA 497


>gi|183179739|ref|ZP_02957950.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|183013150|gb|EDT88450.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 305

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L     N        V +GR+ R TP++ + I+     P W  P SI +K+
Sbjct: 95  IVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISSKRKYPTWTPPASI-RKE 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                 K K + +  V                G  N +    + 
Sbjct: 154 Y---------------------KAKGIDLPPVV-------------PAGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I     
Sbjct: 180 LAYGSGEYLIHGTNKD--FGVGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRI----- 229

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 230 INEPIKVALEPDRSVFI 246


>gi|294499079|ref|YP_003562779.1| autolytic lysozyme [Bacillus megaterium QM B1551]
 gi|294349016|gb|ADE69345.1| autolytic lysozyme [Bacillus megaterium QM B1551]
          Length = 298

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+  + V+++++ L+  G   P  G    +   + +AVK FQ R+GL   G+  + TL
Sbjct: 227 GDRGLGVKQIQQNLLALGFSLPKFGADGFYGDELIAAVKKFQNRYGLFSDGIAGADTL 284


>gi|153212801|ref|ZP_01948437.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124116314|gb|EAY35134.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 306

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L     N        V +GR+ R TP++ + I+     P W  P SI +K+
Sbjct: 95  IVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISSKRKYPTWTPPASI-RKE 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                 K K + +  V                G  N +    + 
Sbjct: 154 Y---------------------KAKGIDLPPVV-------------PAGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I     
Sbjct: 180 LAYGSGEYLIHGTNKD--FGVGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRI----- 229

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 230 INEPIKVALEPDRSVFI 246


>gi|15600829|ref|NP_232459.1| hypothetical protein VCA0058 [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|121585891|ref|ZP_01675684.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121730222|ref|ZP_01682608.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147671464|ref|YP_001214920.1| hypothetical protein VC0395_0079 [Vibrio cholerae O395]
 gi|153820063|ref|ZP_01972730.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153827505|ref|ZP_01980172.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|227811686|ref|YP_002811696.1| hypothetical protein VCM66_A0055 [Vibrio cholerae M66-2]
 gi|229506766|ref|ZP_04396275.1| hypothetical protein VCF_001990 [Vibrio cholerae BX 330286]
 gi|229510439|ref|ZP_04399919.1| hypothetical protein VCE_001845 [Vibrio cholerae B33]
 gi|229514568|ref|ZP_04404029.1| hypothetical protein VCB_002218 [Vibrio cholerae TMA 21]
 gi|229517430|ref|ZP_04406875.1| hypothetical protein VCC_001453 [Vibrio cholerae RC9]
 gi|229522730|ref|ZP_04412146.1| hypothetical protein VIF_003296 [Vibrio cholerae TM 11079-80]
 gi|229526305|ref|ZP_04415709.1| hypothetical protein VCA_000424 [Vibrio cholerae bv. albensis
           VL426]
 gi|229527953|ref|ZP_04417344.1| hypothetical protein VCG_001031 [Vibrio cholerae 12129(1)]
 gi|229605240|ref|YP_002875944.1| hypothetical protein VCD_000180 [Vibrio cholerae MJ-1236]
 gi|254284784|ref|ZP_04959751.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|254850325|ref|ZP_05239675.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255746115|ref|ZP_05420062.1| hypothetical protein VCH_002489 [Vibrio cholera CIRS 101]
 gi|262158602|ref|ZP_06029716.1| hypothetical protein VIG_001835 [Vibrio cholerae INDRE 91/1]
 gi|262168986|ref|ZP_06036680.1| hypothetical protein VIJ_002194 [Vibrio cholerae RC27]
 gi|297579802|ref|ZP_06941729.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298499923|ref|ZP_07009729.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9657441|gb|AAF95972.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121549827|gb|EAX59847.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121628026|gb|EAX60576.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126509398|gb|EAZ71992.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|146313847|gb|ABQ18387.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|149738568|gb|EDM52923.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150425569|gb|EDN17345.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227010828|gb|ACP07039.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227014690|gb|ACP10899.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229334315|gb|EEN99800.1| hypothetical protein VCG_001031 [Vibrio cholerae 12129(1)]
 gi|229336463|gb|EEO01481.1| hypothetical protein VCA_000424 [Vibrio cholerae bv. albensis
           VL426]
 gi|229340715|gb|EEO05721.1| hypothetical protein VIF_003296 [Vibrio cholerae TM 11079-80]
 gi|229345466|gb|EEO10439.1| hypothetical protein VCC_001453 [Vibrio cholerae RC9]
 gi|229348548|gb|EEO13506.1| hypothetical protein VCB_002218 [Vibrio cholerae TMA 21]
 gi|229352884|gb|EEO17824.1| hypothetical protein VCE_001845 [Vibrio cholerae B33]
 gi|229357117|gb|EEO22035.1| hypothetical protein VCF_001990 [Vibrio cholerae BX 330286]
 gi|229371726|gb|ACQ62148.1| hypothetical protein VCD_000180 [Vibrio cholerae MJ-1236]
 gi|254846030|gb|EET24444.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255735869|gb|EET91267.1| hypothetical protein VCH_002489 [Vibrio cholera CIRS 101]
 gi|262022685|gb|EEY41392.1| hypothetical protein VIJ_002194 [Vibrio cholerae RC27]
 gi|262029482|gb|EEY48132.1| hypothetical protein VIG_001835 [Vibrio cholerae INDRE 91/1]
 gi|297535448|gb|EFH74282.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297541904|gb|EFH77955.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327485292|gb|AEA79698.1| hypothetical protein VCLMA_B0050 [Vibrio cholerae LMA3894-4]
          Length = 306

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L     N        V +GR+ R TP++ + I+     P W  P SI +K+
Sbjct: 95  IVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISSKRKYPTWTPPASI-RKE 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                 K K + +  V                G  N +    + 
Sbjct: 154 Y---------------------KAKGIDLPPVV-------------PAGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I     
Sbjct: 180 LAYGSGEYLIHGTNKD--FGVGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRI----- 229

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 230 INEPIKVALEPDRSVFI 246


>gi|167037751|ref|YP_001665329.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040445|ref|YP_001663430.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           sp. X514]
 gi|256752473|ref|ZP_05493331.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|289578529|ref|YP_003477156.1| peptidoglycan-binding protein [Thermoanaerobacter italicus Ab9]
 gi|297544804|ref|YP_003677106.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|300914496|ref|ZP_07131812.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307724268|ref|YP_003904019.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|320116165|ref|YP_004186324.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|326389918|ref|ZP_08211481.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|166854685|gb|ABY93094.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X514]
 gi|166856585|gb|ABY94993.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256748675|gb|EEU61721.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|289528242|gb|ADD02594.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter italicus
           Ab9]
 gi|296842579|gb|ADH61095.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|300889431|gb|EFK84577.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307581329|gb|ADN54728.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|319929256|gb|ADV79941.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325993978|gb|EGD52407.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 77

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +L  R L+ G     V +L+  L   G       +   F    ++AV  FQ  +GL   
Sbjct: 4   QQLGSRLLYEGTVGYDVLQLQMILQSLGY--DPGPIDGIFGPRTKNAVMRFQRDNGLKVD 61

Query: 155 GMVDSSTLEAMNV 167
           G+V   T+  +N+
Sbjct: 62  GIVGPETMRVINM 74


>gi|327198078|ref|YP_004306445.1| gp33 [Burkholderia phage KL3]
 gi|310657212|gb|ADP02326.1| gp33 [Burkholderia phage KL3]
          Length = 269

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G    +  +S  +D   E AVK  Q   G+   G+   +T
Sbjct: 4   LRFNDRGAEVGLLQQRLLRAGY---ALDVSHLYDEATEQAVKALQAAAGIVVDGLAGPNT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
              ++     R    + ++ R
Sbjct: 61  YAVLSAGQRDRKHLTEADIAR 81


>gi|302548169|ref|ZP_07300511.1| putative peptidoglycan binding domain-containing protein
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302465787|gb|EFL28880.1| putative peptidoglycan binding domain-containing protein
           [Streptomyces himastatinicus ATCC 53653]
          Length = 121

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL--D 152
           P      L  G+S   V  L+ RL+   D+     ++  +D  +  AV  FQ+ +G+  D
Sbjct: 41  PGSQAGVLSQGDSGPQVSELQTRLLKIPDVYRDGQVNGRYDQTLTEAVARFQLWYGIRGD 100

Query: 153 PSGMVDSSTLEAM 165
             G+   +T   +
Sbjct: 101 EDGVYGDATRRDL 113


>gi|238796357|ref|ZP_04639866.1| hypothetical protein ymoll0001_21850 [Yersinia mollaretii ATCC
           43969]
 gi|238719802|gb|EEQ11609.1| hypothetical protein ymoll0001_21850 [Yersinia mollaretii ATCC
           43969]
          Length = 289

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 70/208 (33%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L    ++    +   + +G++ R TP + + +++ + NP W
Sbjct: 25  MLLPDTPREGIVINLAELRLYYYPKDQNKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTW 84

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           YL                         E          G 
Sbjct: 85  T-PTANIRK----------HYLA------------------------EGVTLPAVVPAGP 109

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   +    Y +H T     F   +R  +SGC+R+    D+   L K  P  
Sbjct: 110 ENPMGLFAMRLSAGRGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-EALFKSVPKG 164

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 165 TRVQIINEPVKYSVEPDGKRYVEVHQPL 192


>gi|226944399|ref|YP_002799472.1| ErfK/YbiS/YcfS/YnhG family protein [Azotobacter vinelandii DJ]
 gi|226719326|gb|ACO78497.1| ErfK/YbiS/YcfS/YnhG family protein [Azotobacter vinelandii DJ]
          Length = 317

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 59/177 (33%), Gaps = 45/177 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +    ++  V     + +GR    +P+  +RI   + +P
Sbjct: 85  RYILPPGPREG-IIINLAEYRMYYFPKDQNVVHTYPLGIGREGWGSPVAETRITGKIKDP 143

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P+SI +++                                  ++ +          
Sbjct: 144 AWYPPKSI-REE----------------------------------HAADGDPLPTVVPA 168

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
           G  N +   K       + Y +H + +   F   +R  + GC R+   N++ L   +
Sbjct: 169 GPDNPLGPFKFTL--GLSGYLIHGSNKK--FGIGMR-VSHGCFRMLNHNVLQLADMV 220


>gi|82543952|ref|YP_407899.1| hypothetical protein SBO_1452 [Shigella boydii Sb227]
 gi|81245363|gb|ABB66071.1| conserved hypothetical protein [Shigella boydii Sb227]
          Length = 334

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I ++                            G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKLL----------------------PVV-PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    + F   N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRFAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|220929601|ref|YP_002506510.1| peptidoglycan-binding protein [Clostridium cellulolyticum H10]
 gi|219999929|gb|ACL76530.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulolyticum
           H10]
          Length = 549

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              VQ+L+ERL   G ++   G    F +  ++AVK FQ R+GL   G V   T E M
Sbjct: 185 GTDVQQLQERLYELGYINKVTG---YFGSDTDTAVKEFQKRNGLYDDGNVGKQTREIM 239



 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG+ +  + + ++RL   G L  +   S  ++     AVK FQ  +GL   G +   T +
Sbjct: 251 LGDENGEILQYKQRLYELGYL--TAKPSGKYNNDTVLAVKRFQENNGLISDGYIGPVTKD 308

Query: 164 AM 165
            +
Sbjct: 309 LL 310



 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G++   V +++  L+  G L   KG++  F +   +AV  FQ R+GL   G V S T
Sbjct: 320 LDIGDNGEDVTKVQTYLMKLGYL---KGVTGYFGSDTHNAVLKFQSRNGLGQDGKVGSQT 376

Query: 162 LEAMNVPVDLR 172
           +  + +  D R
Sbjct: 377 IAKL-LSSDAR 386


>gi|160879581|ref|YP_001558549.1| peptidoglycan binding domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|160428247|gb|ABX41810.1| Peptidoglycan-binding domain 1 protein [Clostridium phytofermentans
           ISDg]
          Length = 363

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 21/99 (21%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
            P  +  ++ Q    + +Y                 H G++   V  +R  L   G    
Sbjct: 95  TPTATP-SLDQVRNGLDYY-----------------HSGDTGTPVTTIRTLLNNKGYTCA 136

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S G   ++DA + + VK FQ   GL   G     TL A+
Sbjct: 137 STG---SYDADLVNVVKSFQTAMGLSSDGSAGQGTLAAL 172


>gi|73669348|ref|YP_305363.1| hypothetical protein Mbar_A1842 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396510|gb|AAZ70783.1| conserved protein [Methanosarcina barkeri str. Fusaro]
          Length = 306

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+++++ LI      P  G +  F    E AV+ +Q   GL   G++   T
Sbjct: 30  LQRGDRGSAVRKVQQALIFLDFPVPEVGANGIFGGETELAVRSYQESRGLKVDGIIGQET 89

Query: 162 LEAM 165
           + ++
Sbjct: 90  IGSL 93


>gi|28210107|ref|NP_781051.1| spore-cortex-lytic enzyme precursor [Clostridium tetani E88]
 gi|28202543|gb|AAO34988.1| spore-cortex-lytic enzyme precursor [Clostridium tetani E88]
          Length = 255

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G+    V  ++++L   G  D S      +  ++  AVK FQ ++GL+  G+  + TL 
Sbjct: 66  YGSKGGDVSEIQKKLKNWGYYDGSVDGIYGYKTFL--AVKKFQGKNGLNVDGVAGNKTLA 123

Query: 164 AMNVPVDL 171
           A+ + V  
Sbjct: 124 ALGINVAQ 131


>gi|239631525|ref|ZP_04674556.1| periplasmic protease [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239525990|gb|EEQ64991.1| periplasmic protease [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 480

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 390 INATQLKPGDKGSDVKSLQQMLTALK--VGSVTVNSQYDDATQAAVKTFQQANKLDATGT 447

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL A+   +  ++ +
Sbjct: 448 ADQDTLAALAQKLSAQLTK 466


>gi|119504858|ref|ZP_01626936.1| general secretion pathway protein A [marine gamma proteobacterium
           HTCC2080]
 gi|119459463|gb|EAW40560.1| general secretion pathway protein A [marine gamma proteobacterium
           HTCC2080]
          Length = 555

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 16/169 (9%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP---IISKETIAQTE------KAI 82
            A V D +I  +   +++ +     +   + +  + P   ++S + I             
Sbjct: 393 TAQVWDSVIALNRPVMLDMQTPARFSAATLVVAFEGPLAWVLSNDGIKSIRLVDMATAWR 452

Query: 83  AFYQDILSRG-GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y+       GW     RPL  G+   +V  + + L  + D   +      F   +   
Sbjct: 453 GRYRMFWQPPQGW----NRPLVEGDIDPAVAVVAQ-LFATLDQQVTPLTKQRFTPALAER 507

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           V+LFQ ++ L   G+V   TL  +N  +   +      L R + L+E  
Sbjct: 508 VRLFQAQNNLTADGVVGVQTLLKLNDALGKGLVS-GAALRRAQWLMEGP 555


>gi|153831250|ref|ZP_01983917.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|254224595|ref|ZP_04918211.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125622658|gb|EAZ50976.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|148873270|gb|EDL71405.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 306

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L     N        V +GR+ R TP++ + I+     P W  P SI +K+
Sbjct: 95  IVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISSKRKYPTWTPPASI-RKE 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                 K K + +  V                G  N +    + 
Sbjct: 154 Y---------------------KAKGIDLPPVV-------------PAGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I     
Sbjct: 180 LAYGSGEYLIHGTNKD--FGVGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRI----- 229

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 230 INEPIKVALEPDRSVFI 246


>gi|320184429|gb|EFW59237.1| L,D-transpeptidase YnhG [Shigella flexneri CDC 796-83]
 gi|332096091|gb|EGJ01096.1| lysM domain protein [Shigella boydii 3594-74]
          Length = 334

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I ++                            G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKLL----------------------PVV-PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    + F   N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRFAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|262404758|ref|ZP_06081313.1| general secretion pathway protein A [Vibrio sp. RC586]
 gi|262349790|gb|EEY98928.1| general secretion pathway protein A [Vibrio sp. RC586]
          Length = 529

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 12/107 (11%)

Query: 64  DSDIPIISKETIAQTEKAIA-----FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERL 118
           D    ++  E      + +       Y  +L +GG+     R L  G     V  L  +L
Sbjct: 415 DQAELLVGNERYRIARQWLEPLWRGQY-SLLWQGGF----SRTLKQGMRGADVALLESKL 469

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                L   +     FD  +   V+LFQ    +   G+    TL  +
Sbjct: 470 AQV--LGEPERPRELFDKDLARKVELFQRWQNMHVDGIAGRQTLRRL 514


>gi|154816022|emb|CAO85704.1| putative spore-cortex-lytic enzyme precursor [Clostridium sp.]
          Length = 198

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G+    V  ++++L   G  D S      +  ++  AVK FQ ++GL+  G+  + TL 
Sbjct: 91  YGSKGGGVSEIQKKLKNWGYYDGSVDGIYGYKTFL--AVKKFQGKNGLNVDGVAGNKTLA 148

Query: 164 AMNVPVDL 171
           A+ + V  
Sbjct: 149 ALGINVAQ 156


>gi|226939342|ref|YP_002794415.1| hypothetical protein LHK_00411 [Laribacter hongkongensis HLHK9]
 gi|226941506|ref|YP_002796580.1| hypothetical protein LHK_02590 [Laribacter hongkongensis HLHK9]
 gi|226714268|gb|ACO73406.1| Peptidoglycan-binding domain 1 protein precursor [Laribacter
           hongkongensis HLHK9]
 gi|226716433|gb|ACO75571.1| Peptidoglycan-binding domain 1 protein precursor [Laribacter
           hongkongensis HLHK9]
          Length = 267

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++  +V  L+++L   G      G    F     +AV+ FQ + GL   G V   T
Sbjct: 4   LKQGSTGSAVTVLQQQLNRLGFALEPDG---WFGEATRAAVRAFQRQAGLLDDGKVGPVT 60

Query: 162 LEAMNV--PVDLRI 173
            EA+    PV  R+
Sbjct: 61  REALQGILPVPRRL 74


>gi|27367891|ref|NP_763418.1| hypothetical protein VV2_1544 [Vibrio vulnificus CMCP6]
 gi|320158161|ref|YP_004190539.1| hypothetical protein VVM_00694 [Vibrio vulnificus MO6-24/O]
 gi|27359464|gb|AAO08408.1| hypothetical protein VV2_1544 [Vibrio vulnificus CMCP6]
 gi|319933473|gb|ADV88336.1| hypothetical protein VVMO6_03314 [Vibrio vulnificus MO6-24/O]
          Length = 305

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 67/201 (33%), Gaps = 52/201 (25%)

Query: 196 VLVNIPAASLEAVEN--GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L   E   GKV     V +GRV R TP + + I     NP W  P SI +K
Sbjct: 98  IVINLAELRLYYFEPELGKV-HVFPVGIGRVGRDTPEMVTSIREKRPNPTWTPPASI-RK 155

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +            ++  I +                             G  N +    +
Sbjct: 156 EY-----------REKGIEL-----------------------PKIVPAGPDNPLGEYAL 181

Query: 314 EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                +  Y +H T +   F   +R  ++GC+R+    D+  WL        R  I    
Sbjct: 182 RLAYGSGDYLIHGTNKD--FGIGLR-VSAGCIRME-PKDI-EWLFSQVDKGQRVKI---- 232

Query: 373 KTRKTTPVKLATEVPVHFVYI 393
              +   V L    P   VY+
Sbjct: 233 -INQPVKVSLE---PGRIVYL 249


>gi|227487672|ref|ZP_03917988.1| hydrolase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227541382|ref|ZP_03971431.1| hydrolase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227092366|gb|EEI27678.1| hydrolase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227182933|gb|EEI63905.1| hydrolase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 392

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 11/84 (13%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V +L+ +L   G    +  +   +D     AVK +Q+  GL   G+    T+ A+
Sbjct: 98  MVGDDVVQLQTQLQELGFY--TDKVDGHYDDVTYEAVKTYQLNSGLTEDGICGPETVRAL 155

Query: 166 NV---------PVDLRIRQLQVNL 180
           ++         P+ +R R+L  N 
Sbjct: 156 SLLGHHITGGNPLAIRERELVRNA 179



 Score = 56.4 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISG--------DLDPSKGLSVAFDAYVESAVKLFQMR 148
           + ++ L +G+ S  V  +R  L   G          D  +     FD  +   +  FQ  
Sbjct: 2   VVLKKLSVGDRSPRVAEVRATLARLGRNDAFSAPLADDFRVEETLFDEELSELLCAFQQS 61

Query: 149 HGLDPSGMVDSSTLEAM 165
            G+  +GM+D  TL A+
Sbjct: 62  RGILATGMIDEPTLRAL 78


>gi|37676018|ref|NP_936414.1| hypothetical protein VVA0358 [Vibrio vulnificus YJ016]
 gi|37200558|dbj|BAC96384.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
           YJ016]
          Length = 305

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 67/201 (33%), Gaps = 52/201 (25%)

Query: 196 VLVNIPAASLEAVEN--GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L   E   GKV     V +GRV R TP + + I     NP W  P SI +K
Sbjct: 98  IVINLAELRLYYFEPELGKV-HVFPVGIGRVGRDTPEMVTSIREKRPNPTWTPPASI-RK 155

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +            ++  I +                             G  N +    +
Sbjct: 156 EY-----------REKGIEL-----------------------PKIIPAGPDNPLGEYAL 181

Query: 314 EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                +  Y +H T +   F   +R  ++GC+R+    D+  WL        R  I    
Sbjct: 182 RLAYGSGDYLIHGTNKD--FGIGLR-VSAGCIRME-PKDI-EWLFSQVDKGQRVKI---- 232

Query: 373 KTRKTTPVKLATEVPVHFVYI 393
              +   V L    P   VY+
Sbjct: 233 -INQPVKVSLE---PGRIVYL 249


>gi|254412152|ref|ZP_05025927.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181118|gb|EDX76107.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 734

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 95  PELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P +  RP   L  G+ +  V  L+  L ++G  +    ++  + +  + AV   Q   GL
Sbjct: 154 PAVSARPNFILQRGDRNSQVTSLQRNLQVAGYFNG--PITGYYGSTTQDAVIQLQQAKGL 211

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQ 175
              GM    T  A+         Q
Sbjct: 212 TVDGMAGPKTRAALESTPVSSASQ 235



 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P+  L  GNS   V  L++ L   G  +    ++  +    E+AV  FQ  +GL P G+V
Sbjct: 61  PVLALRKGNSGAEVTNLQKTLQAEGYFNG--PITGYYGPLTEAAVIQFQQANGLSPDGIV 118

Query: 158 DSSTLEAM 165
            ++T   +
Sbjct: 119 GTNTTATL 126



 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+ +  V  L+  L   G  D    ++  +    E+AV  +Q   GL   GMV
Sbjct: 252 PGLVLKRGSRNSDVTALQRTLQAQGYYDG--PITGYYGNLTENAVIQYQKAKGLTVDGMV 309

Query: 158 DSSTLEAMNVP 168
            ++T  A+ +P
Sbjct: 310 GANTKAALELP 320


>gi|262164646|ref|ZP_06032384.1| hypothetical protein VMA_001090 [Vibrio mimicus VM223]
 gi|262027026|gb|EEY45693.1| hypothetical protein VMA_001090 [Vibrio mimicus VM223]
          Length = 306

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 66/197 (33%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L      +       V +GR+ R TP++ + I+    NP W  P SI + +
Sbjct: 95  IVINLAELRLYYFRPDEGKVHIFPVGIGRIGRDTPVMQTSISGKRKNPTWTPPASI-RSE 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             A   + P  +                                    G  N +    + 
Sbjct: 154 YKAKGIELPAVV----------------------------------PSGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I +   
Sbjct: 180 LAYGSGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRIID--- 231

Query: 374 TRKTTPVKLATEVPVHF 390
             +   + L  +  V  
Sbjct: 232 --EPIKIALEPDRSVFI 246


>gi|297162440|gb|ADI12152.1| hypothetical protein SBI_09034 [Streptomyces bingchenggensis BCW-1]
          Length = 71

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL--DPSGMVDS 159
           L LG+S   V  L+ RL+   D+     ++  +D  + SAV  FQ+ +G+  D  G+   
Sbjct: 2   LSLGDSGPEVSELQSRLLRIPDVYTGGSVNGQYDQSLASAVARFQLWYGIRGDEDGVYGD 61

Query: 160 STLEAM 165
            T   +
Sbjct: 62  DTRRDL 67


>gi|258622172|ref|ZP_05717198.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|262173168|ref|ZP_06040845.1| hypothetical protein VII_000255 [Vibrio mimicus MB-451]
 gi|258585496|gb|EEW10219.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|261890526|gb|EEY36513.1| hypothetical protein VII_000255 [Vibrio mimicus MB-451]
          Length = 306

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 66/197 (33%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L      +       V +GR+ R TP++ + I+    NP W  P SI + +
Sbjct: 95  IVINLAELRLYYFRPDEGKVHIFPVGIGRIGRDTPVMQTSISGKRKNPTWTPPASI-RSE 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             A   + P  +                                    G  N +    + 
Sbjct: 154 YKAKGIELPAVV----------------------------------PSGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I +   
Sbjct: 180 LAYGSGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRIID--- 231

Query: 374 TRKTTPVKLATEVPVHF 390
             +   + L  +  V  
Sbjct: 232 --EPIKIALEPDRSVFI 246


>gi|295314770|gb|ADF97535.1| PlyM10 [uncultured phage]
          Length = 282

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L    G    FD   E+AVK FQ  +GL   G+  + +   
Sbjct: 220 GDTGAAVKTLQSELKQAGFLLSVDG---IFDKGTETAVKAFQRANGLAVDGVFGTGSQAK 276

Query: 165 MN 166
           +N
Sbjct: 277 LN 278


>gi|258624238|ref|ZP_05719187.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258583389|gb|EEW08189.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 306

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 66/197 (33%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L      +       V +GR+ R TP++ + I+    NP W  P SI + +
Sbjct: 95  IVINLAELRLYYFRPDEGKVHIFPVGIGRIGRDTPVMQTSISGKRKNPTWTPPASI-RSE 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             A   + P  +                                    G  N +    + 
Sbjct: 154 YKAKGIELPAVV----------------------------------PSGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I +   
Sbjct: 180 LAYGSGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRIID--- 231

Query: 374 TRKTTPVKLATEVPVHF 390
             +   + L  +  V  
Sbjct: 232 --EPIKIALEPDRSVFI 246


>gi|254284375|ref|ZP_04959343.1| general secretion pathway protein A [gamma proteobacterium NOR51-B]
 gi|219680578|gb|EED36927.1| general secretion pathway protein A [gamma proteobacterium NOR51-B]
          Length = 559

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             P+ LG+ S  V  L  R     D   +      F+  +E+ V+LFQ   GL   G+V 
Sbjct: 470 SGPVGLGDESP-VVTLVARDFAELDDQATPLAETRFNQRLEARVRLFQRSEGLAADGVVG 528

Query: 159 SSTLEAMNVPVDLRIRQLQV-NLMRIK 184
           ++T+  +N     R+ ++   +L R +
Sbjct: 529 AATMMRLN----QRLGRMATGDLARAR 551


>gi|297531427|ref|YP_003672702.1| NLP/P60 protein [Geobacillus sp. C56-T3]
 gi|297254679|gb|ADI28125.1| NLP/P60 protein [Geobacillus sp. C56-T3]
          Length = 450

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 2/90 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L +G+    V++L+++L   G    S  ++  +      AV+ FQ  +GL  +
Sbjct: 169 PATSSDALTIGSRGDDVRKLQQQLKQLGYFTYSD-ITGYYGVLTADAVRRFQRDNGLPVT 227

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           G VD+ T   +   V  +     + + R +
Sbjct: 228 GAVDNQTAARLASAVKAKTTSPAL-IERER 256



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G SS  + ++++RL   G     K     F A  E AVK FQ    L  +G+VD +T 
Sbjct: 29  KKGMSSPEITQIQQRLKEQGFFTYPKATG-YFGAITEEAVKAFQRAMNLPATGIVDDATY 87

Query: 163 EAMNVPVD 170
             +  P  
Sbjct: 88  AKLKKPAS 95



 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+   +V  L+  L   G       ++  + A    AVK FQ  +GL  +G  D +
Sbjct: 98  TLAIGSRGAAVSDLQRWLKQLGYF-RYPQITGYYGAVTADAVKQFQQANGLPATGRADRA 156

Query: 161 TLEAM 165
           TLE +
Sbjct: 157 TLERL 161



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 8/97 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V+R++ +L   G       ++  +      AV+ FQ    L  +G+VD  T
Sbjct: 261 LSIGALGEDVKRIQTKLKELGYF--WTAITGYYGTATADAVRRFQQAAQLPATGVVDGET 318

Query: 162 LEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
            E +       ++  +++          + +G  YV 
Sbjct: 319 YERLIGQAPAAKLDVIELVAD-----AAELLGTPYVW 350


>gi|188991092|ref|YP_001903102.1| putative carboxpeptidase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167732852|emb|CAP51046.1| putative carboxpeptidase [Xanthomonas campestris pv. campestris]
          Length = 431

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 43/129 (33%), Gaps = 22/129 (17%)

Query: 42  ESYHSIVNDRFDNFLARVDM-GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR 100
           E Y      R  + +  V   G+D    + S  T  Q  K+                   
Sbjct: 169 EEYAGNWERRVPDLIESVKRDGVDLKHSVTSGSTSHQVSKS----------------TDG 212

Query: 101 PLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            L  G     V++L+ +L   G    D  P K     F    + AV+ FQ  HGL   G+
Sbjct: 213 KLEQGERGEQVKQLQGQLAQLGAVGRDGKPLKPDGD-FGGNTKYAVEQFQREHGLQIDGV 271

Query: 157 VDSSTLEAM 165
               T  A+
Sbjct: 272 AGQQTQAAL 280


>gi|305681688|ref|ZP_07404494.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium matruchotii
           ATCC 14266]
 gi|305658848|gb|EFM48349.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium matruchotii
           ATCC 14266]
          Length = 392

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 10/74 (13%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK----------GLSVAFDAYVESAVKLFQMRHGL 151
           L +G++S  V  +R+ L   G L                   FD  +E+A++ FQ   G+
Sbjct: 5   LKVGDNSPRVAEVRKSLARLGLLPNYNESGNPDHAIYNADTLFDDELEAALRGFQQARGI 64

Query: 152 DPSGMVDSSTLEAM 165
             SG ++  TL  +
Sbjct: 65  IASGEINEMTLRVL 78



 Score = 44.1 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR----QL 176
            G    S  +   F  +   A+  +QM +GL+  G+   +T+ ++N  +  RI     Q 
Sbjct: 113 LGFY--SDRIDGHFGEHTYRALLKYQMNYGLNMDGICGPNTIRSLNR-LGRRITGGSPQK 169

Query: 177 QVNLMRIKKLLEQKMGLRYVL 197
                R++    +  G R V+
Sbjct: 170 LRERERMRAAGPRLTGKRVVI 190


>gi|21243340|ref|NP_642922.1| carboxypeptidase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108884|gb|AAM37458.1| carboxypeptidase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 431

 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 5/70 (7%)

Query: 100 RPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
             L  G     V++L+ +L   G    D  P +     F    + AV+ FQ  HGL   G
Sbjct: 212 GKLEQGERGEQVKQLQGQLAQLGAVGRDGKPLRADGD-FGGNTKYAVEQFQREHGLQIDG 270

Query: 156 MVDSSTLEAM 165
           +    T  A+
Sbjct: 271 VAGQQTQAAL 280


>gi|325926234|ref|ZP_08187591.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
 gi|325543353|gb|EGD14779.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
          Length = 343

 Score = 59.1 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 5/70 (7%)

Query: 100 RPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
             L  G     V++L+ +L   G    D  P +     F    + AV+ FQ  HGL   G
Sbjct: 212 GKLEQGERGEQVKQLQGQLAQLGAVGRDGKPLRADGD-FGGNTKYAVEQFQREHGLQIDG 270

Query: 156 MVDSSTLEAM 165
           +    T  A+
Sbjct: 271 VAGQQTQAAL 280


>gi|302390198|ref|YP_003826019.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosediminibacter oceani DSM
           16646]
 gi|302200826|gb|ADL08396.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosediminibacter oceani DSM
           16646]
          Length = 229

 Score = 59.1 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V  +++RL   G  + S      + +    AVK FQ   GL  +G+VD 
Sbjct: 160 RTLVEGSRGSDVMEVQKRLANHGFYNGS--FDGIYGSGTREAVKAFQKAKGLKATGIVDE 217

Query: 160 STLEAMNV 167
           +T +A+ +
Sbjct: 218 ATYKALGI 225


>gi|282896383|ref|ZP_06304404.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
 gi|281198671|gb|EFA73551.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
          Length = 252

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           + GWP      L LGN+   V +L+  L   G    S  L   F   +E AVK  Q+R+G
Sbjct: 177 QSGWPI-----LRLGNTGAEVTKLQRLLRSLGFF--SSPLDGKFSLTLERAVKAAQLRYG 229

Query: 151 LDPSGMVDSSTLE 163
           L   G+  + T E
Sbjct: 230 LTADGVAGAQTWE 242



 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           +I    G   +    L +G+   SV  L+  L + G       +   +      AV  F+
Sbjct: 19  EIAQVTGVGSINRPILKIGSQGESVSELQATLALLGFYSG--PVDGVYRDSTAKAVSQFK 76

Query: 147 MRHGLDPSGMVDSSTLEAM 165
              GL P G+VD+ T + +
Sbjct: 77  QVVGLAPDGIVDTITWQKL 95


>gi|260776994|ref|ZP_05885888.1| hypothetical protein VIC_002384 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260606660|gb|EEX32934.1| hypothetical protein VIC_002384 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 274

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 60/165 (36%), Gaps = 46/165 (27%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L   +  K +     V +GR+ R TP + + I++   NP W  P SI +K+
Sbjct: 64  IVINLAELRLYYFQPEKNLVHIFPVGIGRIGRDTPEMVTSISQKRPNPTWTPPASI-RKE 122

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +    + P+ +                                    G  N +    + 
Sbjct: 123 YLEKGIELPRVV----------------------------------PAGPENPLGEYAMR 148

Query: 315 FYSRNNT--Y-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
                    Y +H T +   F   +R  +SGC+R+ N  D+  WL
Sbjct: 149 L--AYGVGDYLIHGTNKD--FGIGLR-VSSGCIRM-NPKDI-DWL 186


>gi|258539612|ref|YP_003174111.1| carboxyl-terminal protease [Lactobacillus rhamnosus Lc 705]
 gi|257151288|emb|CAR90260.1| Carboxyl-terminal protease [Lactobacillus rhamnosus Lc 705]
          Length = 480

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD SG 
Sbjct: 390 INATQLKPGDKGSDVKSLQQMLKALK--IGSATVNGQYDDATQAAVKSFQEANKLDASGT 447

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL A+   +  ++ +
Sbjct: 448 ADQDTLAALAQKLSDQLTK 466


>gi|229552197|ref|ZP_04440922.1| S41 family carboxy-terminal processing peptidase [Lactobacillus
           rhamnosus LMS2-1]
 gi|229314499|gb|EEN80472.1| S41 family carboxy-terminal processing peptidase [Lactobacillus
           rhamnosus LMS2-1]
          Length = 485

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD SG 
Sbjct: 395 INATQLKPGDKGSDVKSLQQMLKALK--IGSATVNGQYDDATQAAVKSFQEANKLDASGT 452

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL A+   +  ++ +
Sbjct: 453 ADQDTLAALAQKLSDQLTK 471


>gi|199598686|ref|ZP_03212100.1| Periplasmic protease [Lactobacillus rhamnosus HN001]
 gi|199590374|gb|EDY98466.1| Periplasmic protease [Lactobacillus rhamnosus HN001]
          Length = 480

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD SG 
Sbjct: 390 INATQLKPGDKGSDVKSLQQMLKALK--IGSATVNGQYDDATQAAVKSFQEANKLDASGT 447

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL A+   +  ++ +
Sbjct: 448 ADQDTLAALAQKLSDQLTK 466


>gi|212712077|ref|ZP_03320205.1| hypothetical protein PROVALCAL_03156 [Providencia alcalifaciens DSM
           30120]
 gi|212685599|gb|EEB45127.1| hypothetical protein PROVALCAL_03156 [Providencia alcalifaciens DSM
           30120]
          Length = 359

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 64/185 (34%), Gaps = 42/185 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L    EN +  +   + +G++ R TP + + I++++ +P W
Sbjct: 97  MLLPSTPRTGIVINLAELRLYYYPENSRKVVVYPIGIGQLGRDTPEMVTSISQLIKDPTW 156

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           +     I +                             G 
Sbjct: 157 T-PTTNIRK-----------HYAQQGITL-----------------------PAVVPAGP 181

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +        Y +H T     F   +R  +SGC+R+    D+   L  + P  
Sbjct: 182 ENPMGLYALRLSYGRGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-KALFTNVPKG 236

Query: 364 SRYHI 368
           +R  +
Sbjct: 237 TRVQV 241


>gi|307544802|ref|YP_003897281.1| ErfK/YbiS/YcfS/YnhG family protein [Halomonas elongata DSM 2581]
 gi|307216826|emb|CBV42096.1| ErfK/YbiS/YcfS/YnhG family protein [Halomonas elongata DSM 2581]
          Length = 396

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 52/188 (27%)

Query: 189 QKMGLRYVLVNIPAASLEAV---ENGKV--GLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
             +  + +++N+    L      ++G+        + VGR D +TP+ ++ I +++ NP 
Sbjct: 146 PDVPRKGIVINVAEMRLYYYPPAKDGEPRTVQTYPLGVGRQDWETPLGNTTITQMVKNPA 205

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P SI Q+                                   ++            G
Sbjct: 206 WYPPESIRQE-----------------------------------HAAAGDPLPSVVPAG 230

Query: 304 KINAMASTKIEFYSRNNT--Y-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
             N + + K+          Y +H T +P      +R  + GCVR+    D    L    
Sbjct: 231 PNNPLGTRKMRL----GIPGYLIHGTNKPE--GVGMR-VSHGCVRM-LPDD-AEALFDQI 281

Query: 361 PTWSRYHI 368
              ++  I
Sbjct: 282 SVGTQVRI 289


>gi|146329591|ref|YP_001209829.1| hypothetical protein DNO_0937 [Dichelobacter nodosus VCS1703A]
 gi|146233061|gb|ABQ14039.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
          Length = 296

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 53/170 (31%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L  ++    +++N+P   L     GK +     + +GR D  TP+    I     NP
Sbjct: 75  RYILP-EVPREGIVINLPEMRLYYFPEGKSLVYVYAIGIGREDWGTPLGVHTITEKRPNP 133

Query: 243 YWVIPRSI-----IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
            W  P S+      + D++  + +                                    
Sbjct: 134 TWTPPASLRAEHAAKGDILPAVVE------------------------------------ 157

Query: 298 FRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                G  N +    +   + +  Y +H T +P      +R  + GC+R+
Sbjct: 158 ----AGPNNPLGLFAMRLSNPS--YLIHGTNKPW--GVGMR-VSHGCIRM 198


>gi|189490384|ref|YP_001956952.1| virion structural protein [Pseudomonas phage 201phi2-1]
 gi|164609449|gb|ABY63058.1| virion structural protein [Pseudomonas phage 201phi2-1]
          Length = 262

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V RL+ +LI  G    S      F    E AVK  Q+R  L   G+V ++T
Sbjct: 3   LKNGSKGDDVIRLQRKLIGLGY---SVKDDGVFGDNTEKAVKAVQLRFNLKDDGIVGNNT 59

Query: 162 LEAMNVPVDLR 172
              ++ P   R
Sbjct: 60  WAVLDTPTTTR 70


>gi|75906281|ref|YP_320577.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75700006|gb|ABA19682.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 160

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 3/91 (3%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           E  I  Y+   +      + +  L  G+    V+ L++RL  +G          +F    
Sbjct: 68  EDGIVGYKTWQALYEGRAIDLPILKYGSQGELVKALQQRLQNAGYYTGLIDGDFSF--VT 125

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM-NVP 168
           E+ +K FQ+R+ L   G+V   T   + N P
Sbjct: 126 EAGIKSFQLRNNLKVDGIVGDRTWTVLSNTP 156



 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V+ L +RL+ +     S  +    D+     + LFQ R  +   G+V   
Sbjct: 18  TLKQGDTGEVVKEL-QRLLRN-YYCYSGPIDGVLDSETVGGIILFQHRVFIPEDGIVGYK 75

Query: 161 TLEAM 165
           T +A+
Sbjct: 76  TWQAL 80


>gi|257440593|ref|ZP_05616348.1| penicillin-resistant DD-carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
 gi|257196916|gb|EEU95200.1| penicillin-resistant DD-carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
          Length = 159

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   +  G S  +++ ++++L   G+     G    F +   +AV+ FQ R+GL+  G V
Sbjct: 91  PGIVMRTGMSGGTIRLIQQKLNTLGE---KIGTDGKFGSRTAAAVQRFQRRNGLNADGAV 147

Query: 158 DSSTLEAM 165
             +T E +
Sbjct: 148 GKATWEKL 155



 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             P+      F    E+AVK FQ+R+ ++  G V ++T   +
Sbjct: 35  YYPALTTDGRFGTKSENAVKEFQLRNNMNMDGKVGANTWNVL 76


>gi|325570956|ref|ZP_08146575.1| C-terminal processing peptidase [Enterococcus casseliflavus ATCC
           12755]
 gi|325156282|gb|EGC68466.1| C-terminal processing peptidase [Enterococcus casseliflavus ATCC
           12755]
          Length = 476

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 94  WPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           +P LP    L  G SS +V  L + L   G           F+    +AVK FQ  H L 
Sbjct: 383 FPPLPRDNALKAGQSSTAVNNLNQFLKALGY----ATSGDTFNDETTAAVKTFQEAHDLK 438

Query: 153 PSGMVDSSTLEAMNVPVDLRIR 174
            +G VD+ T +A+   V  +++
Sbjct: 439 VTGEVDADTAQAIEKEVTEKLK 460


>gi|254424899|ref|ZP_05038617.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
 gi|196192388|gb|EDX87352.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
          Length = 252

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 10/108 (9%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
             D   D D P ++  T +Q  +     + I        +    L  G+   SV RL+  
Sbjct: 29  SADALEDRDTPQLTTRTYSQISQ-----RQIAQA---STVIYPTLRNGSVGESVSRLQAT 80

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L + G       ++  ++   + AV  FQ    L   G+   +T   +
Sbjct: 81  LKLLGFYQGE--VNGTYNELTQQAVASFQSAVNLSADGITGPATWRKL 126



 Score = 56.4 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L       +V +L+  L   G  D +  +   + A  E+AV+ FQ    L    +V  ST
Sbjct: 185 LRPSAEGPAVSQLQRELQTLGYYDGT--IDGKYGALTEAAVRAFQADQQLIVDAIVGPST 242

Query: 162 LEAM 165
             A+
Sbjct: 243 WTAL 246


>gi|322833496|ref|YP_004213523.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
 gi|321168697|gb|ADW74396.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
          Length = 337

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 64/175 (36%), Gaps = 42/175 (24%)

Query: 196 VLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+    L     G+   +   + +G++ R TP + + +++ + NP W  P + I+K 
Sbjct: 101 IVVNLAEMRLYYYPKGEDKVIVYPIGIGQLGRNTPEMVTSVSQKIPNPTWT-PTANIRK- 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                     YLK+  I +            V                G  N M    + 
Sbjct: 159 ---------AYLKE-GITL---------PGMV--------------PAGPDNPMGLFAMR 185

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
             +    Y +H T     F   +R  +SGC+R+    D+   L    P  +R  I
Sbjct: 186 LSAGTGQYLIHGTNAN--FGIGMR-VSSGCIRL-RPDDI-EALFNSVPKGTRVQI 235


>gi|313115026|ref|ZP_07800517.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622645|gb|EFQ06109.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 165

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+S  +V+ ++++L   G+   + G    F A   +AV+ FQ R+GL   G V
Sbjct: 100 PGIALRSGSSGGTVRLVQQKLNSLGERLNADG---RFGAATAAAVQRFQRRNGLTADGAV 156

Query: 158 DSSTLEAM 165
              T E M
Sbjct: 157 GEGTWEKM 164



 Score = 39.0 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+S   V  ++  L    D             F    E+AVK FQ+++ ++  G V 
Sbjct: 19  LQRGSSGPDVALVQTWLNGVRDACTWYSELKADGKFGISTENAVKEFQLKNKMNVDGKVG 78

Query: 159 SSTLEAM 165
           ++T   +
Sbjct: 79  ANTWNVL 85


>gi|297545285|ref|YP_003677587.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296843060|gb|ADH61576.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 333

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+ S  V  L+ RL      DP   +   F    E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDRSPFVVSLQARLKSL-YFDPGP-IDGIFGRKTEEAVKAYQQSRGLSVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|171321312|ref|ZP_02910273.1| Peptidoglycan-binding domain 1 protein [Burkholderia ambifaria
           MEX-5]
 gi|171093419|gb|EDT38603.1| Peptidoglycan-binding domain 1 protein [Burkholderia ambifaria
           MEX-5]
          Length = 266

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 3/115 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG+    V  L+ +L+              +     +AV  FQ  HGL   G+   
Sbjct: 3   KTLRLGDRGTDVGYLQRQLVA---ASARIDTDAIYGNATRTAVMAFQASHGLVADGIAGP 59

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            T   +             +L R    L+  +     +  + +     + +G+  
Sbjct: 60  KTWSTLASGRRDPRHLTDADLQRSADRLQVDLAAVRAVNEVESHGAGFLPDGRPV 114


>gi|170720947|ref|YP_001748635.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida W619]
 gi|169758950|gb|ACA72266.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida W619]
          Length = 325

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 54/175 (30%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI---- 250
           V++N+    +     G+ V     + +GR    +PI +++I     NP W  P SI    
Sbjct: 100 VVINLAEYRMYYFPKGQSVVYTFPLGIGREGWGSPIANTKIIAKTPNPTWTPPASIRAEH 159

Query: 251 -IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
               D++  +                                           G  N + 
Sbjct: 160 AADGDILPTVV----------------------------------------PAGPDNPLG 179

Query: 310 STKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             K            H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 180 PYKFTLGVPGYLI--HGSNKK--FGIGMRT-SHGCFRMFNNNVLELSKMVPVGTP 229


>gi|297192181|ref|ZP_06909579.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197720174|gb|EDY64082.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 245

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G S   V +L+ R+           +  ++     +AVK FQ  +GL   G+  
Sbjct: 39  SRTLSQGASGSDVTQLQIRMSGYPGYGAVLAVDGSYGPATTAAVKRFQSAYGLAADGVAG 98

Query: 159 SST---LEAM 165
            +T   + A+
Sbjct: 99  PATFSKIYAL 108


>gi|149183036|ref|ZP_01861490.1| putative muramoyl-pentapeptide carboxypeptidase [Bacillus sp. SG-1]
 gi|148849266|gb|EDL63462.1| putative muramoyl-pentapeptide carboxypeptidase [Bacillus sp. SG-1]
          Length = 210

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSG 155
            R +  G+S   V+ L+ R+        S+    +   F +  E+AVK FQ  +GL   G
Sbjct: 4   TRTMRNGDSGSDVKELQIRVAGWASDTASQTYVLVDGVFGSGTEAAVKRFQKAYGLTVDG 63

Query: 156 MVDSSTLEAMN 166
           +    T   +N
Sbjct: 64  IAGPQTHSQLN 74


>gi|90020795|ref|YP_526622.1| general secretion pathway protein A [Saccharophagus degradans 2-40]
 gi|89950395|gb|ABD80410.1| Peptidoglycan-binding domain 1 [Saccharophagus degradans 2-40]
          Length = 563

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+     L  G  S ++  L ++     D       +  F A +   VK+FQ  +GL P 
Sbjct: 478 PKGFTEALIQGQRSPAITWLAQKFAEL-DGREKPLTNDHFSAALAKRVKIFQRNNGLTPD 536

Query: 155 GMVDSSTLEAMN 166
           G+V   TL  +N
Sbjct: 537 GIVGEQTLLKLN 548


>gi|291532676|emb|CBL05789.1| Uncharacterized protein conserved in bacteria [Megamonas
           hypermegale ART12/1]
          Length = 395

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 9/87 (10%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQ 252
           R++L+NIPA SL   +N K      V VG+++ +TP+  +  + +I+ NP W  P  +  
Sbjct: 52  RWILINIPARSLRLYDNDKCIEMYPVGVGKIETKTPVGFYKVVEKIV-NPTWTDPADVSV 110

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGK 279
             ++     +P          I   G 
Sbjct: 111 --VIPSGEDNP-----LGYRWIGIGGN 130


>gi|289665442|ref|ZP_06487023.1| hypothetical protein XcampvN_20822 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 625

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 3/70 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
              L     +  V+ L++ L   G  D           +       VK FQ  HGL   G
Sbjct: 425 SGVLRENVRAADVRTLQQTLQQLGYKDAHGHELKPDGVYGQRTSETVKAFQRAHGLQDDG 484

Query: 156 MVDSSTLEAM 165
           +V   T  A+
Sbjct: 485 VVGRDTQAAL 494


>gi|257438481|ref|ZP_05614236.1| spore cortex-lytic enzyme, pre-pro-form [Faecalibacterium
           prausnitzii A2-165]
 gi|257199060|gb|EEU97344.1| spore cortex-lytic enzyme, pre-pro-form [Faecalibacterium
           prausnitzii A2-165]
          Length = 866

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L +G+S  +V++L+  L      +   PS  +   + +    AV+ FQ R+GL   G+V 
Sbjct: 424 LRVGSSGSAVEQLQFWLNTLAQYESSIPSVAVDGVYGSGTAGAVRAFQRRYGLSVDGVVG 483

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 484 RATWTEL 490



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL  G+   +V  L+ +L  I+ D        +   F + +   VK FQ +  L   
Sbjct: 320 PGSPLRRGDRGTAVFTLQRQLNRITKDYPFLGLLTVDGVFGSRMTETVKRFQKQFNLTAD 379

Query: 155 GMVDSSTLE 163
           G+V   T  
Sbjct: 380 GVVGRQTWY 388



 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 17/131 (12%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQT--EKAIAFYQDILSR--------GGWPEL 97
           V+ +F    A       S   + S   + +T   K    Y DI +R        G +P +
Sbjct: 543 VDGKFGAGTAAAVRRFQSYFGLTSDGVVGRTTWNKLYEVYNDIANRLLTASLRPGEYPGV 602

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
               L  G++  +V+ L+  L +    +   P+  +  +F A  E+AV+ +Q    L   
Sbjct: 603 ----LRRGSTGTAVRELQFYLYLMSAYESSIPAVSIDGSFGAATENAVRAYQRFAKLTVD 658

Query: 155 GMVDSSTLEAM 165
           G+V  +T  ++
Sbjct: 659 GVVGRTTWNSL 669



 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 4/103 (3%)

Query: 84  FYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVE 139
            ++ I S  G P   P   L  G+S  +V+ ++  L I+  + P   +  +   F A   
Sbjct: 493 QFRSIQSDNGRPNAYPGTALRQGSSGQNVRLVQFWLKIARTVYPNLNTLTVDGKFGAGTA 552

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           +AV+ FQ   GL   G+V  +T   +    +    +L    +R
Sbjct: 553 AAVRRFQSYFGLTSDGVVGRTTWNKLYEVYNDIANRLLTASLR 595


>gi|269103521|ref|ZP_06156218.1| general secretion pathway protein A [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163419|gb|EEZ41915.1| general secretion pathway protein A [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 547

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  G     V  L ++L     L   +     FD  +   ++ FQ    L+  G+    
Sbjct: 469 SIRYGQQGPRVAWLNQQLNT--FLGEPQTNQNYFDQGLVDKLRRFQRSQSLNADGIAGKQ 526

Query: 161 TLEAM 165
           TL  +
Sbjct: 527 TLMVL 531


>gi|197334919|ref|YP_002157038.1| general secretion pathway protein A [Vibrio fischeri MJ11]
 gi|197316409|gb|ACH65856.1| general secretion pathway protein A [Vibrio fischeri MJ11]
          Length = 518

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +  R +  G+   ++  L   L+ +  L+     S  FD   E  VK FQ   GL   
Sbjct: 435 PIITERAMRKGDEGAAIFAL-NHLLST-ALEQPMVESDRFDEKTEQQVKQFQEIFGLKED 492

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQ 177
           G+  SSTL  ++   +     LQ
Sbjct: 493 GIAGSSTLMWLDSVTNANAPLLQ 515


>gi|329667436|gb|AEB93384.1| DNA protecting protein [Lactobacillus johnsonii DPC 6026]
          Length = 483

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G +   K ++  FD   ++AV  FQ  HGL   G+V+   
Sbjct: 394 LKKSMTGVDVATLQQYLTALGYMP--KHVTGVFDDETKNAVIEFQKAHGLTADGIVNGQV 451

Query: 162 LEAMNVPVDLRIR 174
              + + V  +++
Sbjct: 452 QAQLYLAVAQKLQ 464


>gi|298113087|gb|ADI58676.1| hypothetical protein [Streptomyces nodosus subsp. asukaensis]
          Length = 555

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 15/125 (12%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG-----GWPEL----PIR 100
            +  N        +D      +K  +A  + A    + + + G      W  L       
Sbjct: 433 QQLLNDQGYPAGAVDGSFGPATKTAVAAFQAA----RGLSADGVVGPRTWTALLSAGTTP 488

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G S   V+RL+  L  +  L  + G+   F     +AV+ +Q   GL   G+V   
Sbjct: 489 SLQQGASGDGVKRLQRSLTAA--LGTTVGIDGGFGPATVTAVRNYQTSRGLTADGIVGPD 546

Query: 161 TLEAM 165
           T  A+
Sbjct: 547 TWAAL 551



 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+ +++ L   G   P+  +  +F    ++AV  FQ   GL   G+V   T  A
Sbjct: 423 GSTGAQVKAVQQLLNDQGY--PAGAVDGSFGPATKTAVAAFQAARGLSADGVVGPRTWTA 480

Query: 165 M 165
           +
Sbjct: 481 L 481


>gi|170754496|ref|YP_001781027.1| zinc carboxypeptidase family protein [Clostridium botulinum B1 str.
           Okra]
 gi|169119708|gb|ACA43544.1| zinc carboxypeptidase family protein [Clostridium botulinum B1 str.
           Okra]
          Length = 423

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E  VK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--NVGPIDGIFGSNTEETVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LEAMN 166
            E +N
Sbjct: 62  YEVLN 66


>gi|323702591|ref|ZP_08114253.1| spore cortex-lytic enzyme [Desulfotomaculum nigrificans DSM 574]
 gi|323532410|gb|EGB22287.1| spore cortex-lytic enzyme [Desulfotomaculum nigrificans DSM 574]
          Length = 239

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   V ++++RL   G       L   F + + +AV+ FQ  +GL   G+V   T +A
Sbjct: 44  GTSGDKVYQVQKRLKDWGYYTG--PLDGYFGSQMSAAVQKFQRYNGLTADGVVGEQTWQA 101

Query: 165 M 165
           +
Sbjct: 102 L 102


>gi|169631880|ref|YP_001705529.1| bacteriophage protein [Mycobacterium abscessus ATCC 19977]
 gi|169243847|emb|CAM64875.1| Bacteriophage protein [Mycobacterium abscessus]
          Length = 282

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 95  PELPIRP-----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR- 148
           P +P+       L  G+    V +L+ RL   G       +   F    E++V+ FQ R 
Sbjct: 200 PSVPVGEYADVLLFRGSKGPQVSQLQRRLNEHG---ADLVVDGIFGPNTEASVREFQRRA 256

Query: 149 HGLDPSGMVDSSTLEAM 165
            GL   G+V  +T  A+
Sbjct: 257 RGLKVDGIVGPATAAAL 273


>gi|260174282|ref|ZP_05760694.1| SpoIID/LytB domain-containing protein [Bacteroides sp. D2]
 gi|315922552|ref|ZP_07918792.1| predicted protein [Bacteroides sp. D2]
 gi|313696427|gb|EFS33262.1| predicted protein [Bacteroides sp. D2]
          Length = 285

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 9/77 (11%)

Query: 105 GNSSVSVQRLRERL-----IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           G S   V  L  +L     II  D++ +    V +   +E+A+K FQ  H     G+V  
Sbjct: 128 GVSGKDVAELANKLVKIRYIIKSDIEKNYSGDVKYSIRLENAIKKFQKDHNQVVDGIVGK 187

Query: 160 STLEAMNVPVDLRIRQL 176
            T+EA+N     +I Q+
Sbjct: 188 KTIEAIN----KQIEQI 200



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L        V +L+  LI  G L       +  FD   E AV  FQ   G+D  G+V++ 
Sbjct: 219 LKKQMQGYDVTQLKNILIDKGYLSGKLLKGTSLFDEETEKAVIKFQKSIGIDADGIVETQ 278

Query: 161 TLEAM 165
           T+  +
Sbjct: 279 TVYFL 283


>gi|301058095|ref|ZP_07199147.1| peptidoglycan binding domain protein [delta proteobacterium NaphS2]
 gi|300447727|gb|EFK11440.1| peptidoglycan binding domain protein [delta proteobacterium NaphS2]
          Length = 544

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 6/81 (7%)

Query: 94  WPELPIRP--LHLGNSSVSVQRLRERL-IISGDLDPS---KGLSVAFDAYVESAVKLFQM 147
           W   PI+   L  G+S   V+ L+ +L  + G  DPS      S  FD  +ES V  FQ 
Sbjct: 453 WKPPPIKSAILKKGDSGPDVRWLKAQLNRVEGGNDPSVSDTAESNVFDDILESRVMNFQR 512

Query: 148 RHGLDPSGMVDSSTLEAMNVP 168
              + P G+V   TL  +  P
Sbjct: 513 SCAVLPDGIVGEQTLIQLTKP 533


>gi|167900261|ref|ZP_02487662.1| bacteriophage-acquired protein [Burkholderia pseudomallei 7894]
          Length = 270

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AVK  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDETTERAVKALQAAAGLVDDGIAGPKT 60

Query: 162 LEAM 165
              +
Sbjct: 61  YAVL 64


>gi|121535627|ref|ZP_01667433.1| 3D domain protein [Thermosinus carboxydivorans Nor1]
 gi|121305797|gb|EAX46733.1| 3D domain protein [Thermosinus carboxydivorans Nor1]
          Length = 193

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L++ L   G    +  +   F      AV  FQ  +GL   G+V   T
Sbjct: 30  LRQGDRGEDVRYLQKMLADKGYY--AGAIDGIFGGATMRAVLEFQRDNGLVADGIVGKDT 87

Query: 162 LEAM 165
           L  +
Sbjct: 88  LRYL 91


>gi|117619077|ref|YP_855859.1| LysM domain-containing protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560484|gb|ABK37432.1| LysM domain protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 305

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 74/210 (35%), Gaps = 50/210 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +    +++N+P   L     GK   +   + +G + R+TP + + +     NP W
Sbjct: 88  MLLPNVPREGIVINLPELRLYYFPKGKNEVMVLPIGIGDIGRETPEMTTTVIAKNPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P          ++R+   +L+   I +                            PG 
Sbjct: 148 -VP--------GPMVRK--SWLEQKGITL-----------------------PAVVPPGP 173

Query: 305 INAMASTKIEFYSRNNT--Y-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
            N +   K           Y +H T +   F   +R  ++GC+R+    D+   L K  P
Sbjct: 174 DNPLG--KFAMRLGYGKQDYLIHGTNKD--FGVGLR-VSAGCIRL-RPDDI-EALFKIVP 226

Query: 362 TWSRYH-----IEEVVKTRKTTPVKLATEV 386
             ++       ++  ++      +++ + +
Sbjct: 227 IGTQVRVINQPVKTAIEPDGRHWLEVHSPL 256


>gi|320175139|gb|EFW50250.1| L,D-transpeptidase YnhG [Shigella dysenteriae CDC 74-1112]
          Length = 334

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I ++                            G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKLL----------------------PVV-PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    + F   N  Y +H T  P      V   +SGC+R+       ++
Sbjct: 173 NNPLGRYALRFAHGNGEYLIHGTSAPDCVGLRV---SSGCIRMNAPDIKALF 221


>gi|298244218|ref|ZP_06968024.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
 gi|297551699|gb|EFH85564.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
          Length = 372

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           I+++  W  L I  +  G+SS +V  ++  L   G    S  ++  + +   SAVK +Q 
Sbjct: 293 IVAQQTWEAL-ITTVTPGSSSAAVSAVQNLLSARGY---SVSVTGYYGSATASAVKSYQS 348

Query: 148 RHGLDPSGMVDSSTLEAM 165
             GL   G V+  T  A+
Sbjct: 349 SRGLTADGTVEKGTWCAL 366



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 40/99 (40%), Gaps = 15/99 (15%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           +P +     ++  K +  Y        WP L  R      S  +V+ ++  L + G    
Sbjct: 219 LPALRHAVASRLNKPLPAY-------TWPTLKSRT-----SGNNVRTIQRLLQVRGY--- 263

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S  +   F     S+++ FQ   GL  +G+V   T EA+
Sbjct: 264 SVAVDGTFGPSTVSSIQSFQSTKGLSVNGIVAQQTWEAL 302


>gi|295706084|ref|YP_003599159.1| endopeptidase [Bacillus megaterium DSM 319]
 gi|294803743|gb|ADF40809.1| Endopeptidase [Bacillus megaterium DSM 319]
          Length = 225

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G +   V++L++ L   G    +            SAVK FQ ++G+   G
Sbjct: 25  ALGDQTLRQGMNHQDVKQLQQTLKNKGYFKGNTTTYFG--TVTTSAVKSFQRKNGIAADG 82

Query: 156 MVDSSTLEAMNVPVDLR 172
           +V   T   + V    +
Sbjct: 83  IVGKGTYAKLGVSAKGK 99


>gi|291541685|emb|CBL14795.1| Putative peptidoglycan-binding domain-containing protein
           [Ruminococcus bromii L2-63]
          Length = 530

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD--S 159
              G+S   V+++++RL   G  D +  +   F    E A K FQ   GL   G+     
Sbjct: 231 YKNGSSGAEVKKIQQRLADLGYYDGA--VDGYFGDATEEAYKAFQKAAGLTVDGIAGDSR 288

Query: 160 STLEAMNVPVDLRIR 174
           +TL + N P   +  
Sbjct: 289 NTLYSENAPEAPKAD 303



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +  V  ++++LI  G    +   +  +  Y   AV  FQ ++ LD +G+VD  T  A
Sbjct: 336 GDENDEVTAIQQQLIKLGYF--AMDATGYYGEYTAQAVANFQNQNSLDSTGIVDEKTYNA 393

Query: 165 M 165
           +
Sbjct: 394 L 394


>gi|323527783|ref|YP_004229936.1| peptidoglycan-binding domain 1 protein [Burkholderia sp. CCGE1001]
 gi|323384785|gb|ADX56876.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. CCGE1001]
          Length = 268

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++   LG+    V  L+ RL  +G       ++  +D   E+AV+  Q + GL   G+  
Sbjct: 1   MKTHRLGDYGDDVGLLQRRLARAGF---QLDVTHVYDDATEAAVEEIQTKVGLVVDGIAG 57

Query: 159 SSTLEAM 165
             TL A+
Sbjct: 58  PKTLAAI 64


>gi|258620833|ref|ZP_05715867.1| General secretion pathway protein A [Vibrio mimicus VM573]
 gi|258586221|gb|EEW10936.1| General secretion pathway protein A [Vibrio mimicus VM573]
          Length = 455

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 12/111 (10%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIA-----FYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
            +  D    ++  +      + +       Y  +L +GG+     R L  G     V  L
Sbjct: 337 RLNADEAELLVGDQRYRIARQWLEPLWRGQY-SLLWQGGF----SRTLKQGMQGDDVALL 391

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +L     L   +     FD  +   V+LFQ    +   G+V   TL  +
Sbjct: 392 ESKLSQV--LGEPERPRDQFDKDLSRKVELFQRWQNMQVDGIVGRQTLRRL 440


>gi|255637048|gb|ACU18856.1| unknown [Glycine max]
          Length = 232

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 38/70 (54%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R +H G ++  V  LR  L   G L      +  FD  VESA+K +Q  H L  +G+VD
Sbjct: 43  LRGVHRGQNAKGVGELRGYLQKYGYLTKGSSSNDNFDENVESALKHYQAFHHLRDTGVVD 102

Query: 159 SSTLEAMNVP 168
             T++ M++P
Sbjct: 103 DDTIKKMSLP 112


>gi|167465177|ref|ZP_02330266.1| cell wall hydrolase, SleB [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 216

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 57/148 (38%), Gaps = 34/148 (22%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L++G  S  V  L+ERL   G     KG++  +    + AV+ FQ  +GL  +G  DS+
Sbjct: 31  TLNIGTQSEHVLNLQERLSSLGYFK--KGITGYYGKITKEAVRDFQKAYGLSVTGSADSA 88

Query: 161 TLEAMN---VPVDLRIRQLQVNLMRIKKLLEQKMGLRY---VLVNIPAASLEAVENGKVG 214
           TL  +N       + + +L       + +  +  G  +   V V            G V 
Sbjct: 89  TLAKLNQMAGSKQITLDKLA------RIIYAEARGESFKGQVAV------------GAVV 130

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNP 242
           L   V       Q+      I  ++F P
Sbjct: 131 LN-RV-------QSNAFPDSITEVIFQP 150


>gi|268319577|ref|YP_003293233.1| carboxy-terminal processing protease [Lactobacillus johnsonii
           FI9785]
 gi|262397952|emb|CAX66966.1| carboxy-terminal processing protease [Lactobacillus johnsonii
           FI9785]
          Length = 483

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G +   K ++  FD   ++AV  FQ  HGL   G+V+   
Sbjct: 394 LKKSMTGVDVATLQQYLTALGYMP--KYVTGVFDDETKNAVIEFQKAHGLTADGIVNGQV 451

Query: 162 LEAMNVPVDLRIR 174
              + + V  +++
Sbjct: 452 QAQLYLAVAQKLQ 464


>gi|258508400|ref|YP_003171151.1| carboxyl-terminal protease [Lactobacillus rhamnosus GG]
 gi|257148327|emb|CAR87300.1| Carboxyl-terminal protease [Lactobacillus rhamnosus GG]
 gi|259649714|dbj|BAI41876.1| protease [Lactobacillus rhamnosus GG]
          Length = 480

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD SG 
Sbjct: 390 INATQLKPGDKGSDVKSLQQMLKALK--IGSATVNGQYDDATQAAVKSFQEANELDASGT 447

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL A+   +  ++ +
Sbjct: 448 ADQDTLAALAQKLSAQLTK 466


>gi|307267035|ref|ZP_07548550.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306917960|gb|EFN48219.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 77

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +L  R L+ G     V +L+  L   G       +   F    ++AV  FQ  +GL   
Sbjct: 4   QQLGSRLLYEGTVGYDVLQLQMILQSLGY--DPGPIDGIFGPRTKNAVMKFQRDNGLKVD 61

Query: 155 GMVDSSTLEAMNV 167
           G+V   T+  +N+
Sbjct: 62  GIVGPETMRVINM 74


>gi|238025815|ref|YP_002910046.1| Gp43, bacteriophage-acquired protein [Burkholderia glumae BGR1]
 gi|237875009|gb|ACR27342.1| Gp43, bacteriophage-acquired protein [Burkholderia glumae BGR1]
          Length = 270

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH  +    V  L+ RL  +G   P+      +D   E AVK  Q   GL   G+    T
Sbjct: 4   LHFNDRGAEVGLLQSRLARAGYTVPTTH---IYDEATERAVKAVQAAAGLVVDGIAGPKT 60

Query: 162 LEAM 165
              +
Sbjct: 61  YATL 64


>gi|218288979|ref|ZP_03493216.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240804|gb|EED07982.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 719

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG++  +V++L+E L     L     +   F    ++AVK FQ++HG+   G+    T
Sbjct: 619 LQLGSTGPAVKQLQEDLNKV--LGLHLAVDGVFGPATQAAVKSFQLQHGITVDGIYGPQT 676

Query: 162 LEAM 165
            +AM
Sbjct: 677 AQAM 680


>gi|289579097|ref|YP_003477724.1| peptidoglycan-binding protein [Thermoanaerobacter italicus Ab9]
 gi|289528810|gb|ADD03162.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter italicus
           Ab9]
          Length = 336

 Score = 58.3 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+ S  V  L+ RL      DP   +   F    E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDRSPFVVNLQARLKSL-YFDPGP-IDGIFGRKTEEAVKAYQQSRGLSVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|269139201|ref|YP_003295902.1| hypothetical protein ETAE_1854 [Edwardsiella tarda EIB202]
 gi|267984862|gb|ACY84691.1| hypothetical protein ETAE_1854 [Edwardsiella tarda EIB202]
          Length = 374

 Score = 58.3 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+  +    + +G++ R TP + +R+++ + +P W
Sbjct: 90  MLLPDTPREGIVINLAELRLFYYPPGENRVEVYPIGIGQLGRNTPEMVTRVSQHIKDPTW 149

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
               +I                   +                     +  +       G 
Sbjct: 150 TPTANI-----------------RRHYQ------------------AQGISLPAVMPAGP 174

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   ++   Y +H T     F   +R  +SGC+R+    D+   L +  P  
Sbjct: 175 DNPMGRFALRLAAQGGVYLIHGTNAD--FGIGMR-VSSGCIRL-RPGDI-EALFRSVPGG 229

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 230 TRVQIVNQPVKTSVEPDGKRYVEVHQPL 257


>gi|282900449|ref|ZP_06308398.1| Peptidoglycan-binding domain protein 1 [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194642|gb|EFA69590.1| Peptidoglycan-binding domain protein 1 [Cylindrospermopsis
           raciborskii CS-505]
          Length = 232

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LGN+   V +L+  L   G       +   F   +E AVK  Q+R+GL   G+V   T
Sbjct: 163 LRLGNTGAEVTKLQRLLRALGFFPS--PIDGKFSVTLERAVKAAQLRYGLTADGVVGGQT 220

Query: 162 L 162
            
Sbjct: 221 W 221



 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Y  I    G   +    L +G+   SV  L+  L + G       +   +      AV  
Sbjct: 6   YTPIAQVTGVGSINRPMLKIGSQGESVSELQATLALLGFYSG--PVDGVYRDSTAKAVSQ 63

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           F+   GL P G+VD+ T + +
Sbjct: 64  FKQVVGLAPDGIVDTITWQKL 84


>gi|226945800|ref|YP_002800873.1| PG-binding-1 domain-containing protein [Azotobacter vinelandii DJ]
 gi|226720727|gb|ACO79898.1| PG-binding-1 domain-containing protein [Azotobacter vinelandii DJ]
          Length = 276

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L L + +++V  L+++L   G           +    E AV+ +Q R GL   G+    
Sbjct: 3   TLRLDDRNLAVLTLQKQLNALG---AGLYPDGHYGEQTEQAVRDYQRRTGLVVDGIAGPK 59

Query: 161 TLEAM---NVPVDLRIRQLQVNLMRI 183
           T+ A+   ++   L+ R L+    R+
Sbjct: 60  TMAALAGQDIGHLLKQRDLERAAERL 85


>gi|237786645|ref|YP_002907350.1| cell wall hydrolase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759557|gb|ACR18807.1| cell wall hydrolase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 392

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 10/74 (13%)

Query: 102 LHLGNSSVSVQRLRERLIISGDL----------DPSKGLSVAFDAYVESAVKLFQMRHGL 151
           L +G+ S  V  +R  L   G L          D        FD  ++SA++ FQ + G+
Sbjct: 5   LQVGDKSPRVAEVRTILTKVGLLKHPVSEHTSTDQWADGDDDFDYELQSALRAFQQQRGV 64

Query: 152 DPSGMVDSSTLEAM 165
              G+++  TL  +
Sbjct: 65  LADGVINDHTLRLL 78



 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V +L+  L   G       +   F     SA+K +Q  +GL   G+    T++A+
Sbjct: 98  MQGDDVAQLQSHLQELGFYSSQ--IDGQFSRDTYSALKNYQRDYGLTVDGVCGPDTMKAL 155


>gi|254414875|ref|ZP_05028639.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196178364|gb|EDX73364.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 406

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P  PL  G+    V++++E L   G  DP       + A  ++AV  FQ   G+   
Sbjct: 335 PLEPFLPLQEGSVGSQVKQVQEVLQQEGF-DPGPADG-IYGAKTKAAVIAFQRSKGMTAD 392

Query: 155 GMVDSSTLEAMN 166
           G+V + T   +N
Sbjct: 393 GIVGAVTWSVLN 404



 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 7/74 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++ + V+ L++ L   G       +   F A  E AV LFQ  +GL+P G+V  +T
Sbjct: 193 LREGDTGLRVKELQQILSAQGF--NPGPIDGIFGAGTEDAVVLFQKFYGLEPDGLVGPNT 250

Query: 162 LEAMNVPVDLRIRQ 175
            + +      R+ Q
Sbjct: 251 WKVL-----ERVSQ 259


>gi|332709903|ref|ZP_08429859.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332351274|gb|EGJ30858.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 140

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            L  G     V+ L++ L+   G       L   ++    +A+K FQ+++ L   G+V  
Sbjct: 68  TLRPGQQGDKVRILQKLLLKKYGYRQKQVPLDGTYNDGTVAAIKKFQLKNSLSADGIVGP 127

Query: 160 STLEAM 165
            T + +
Sbjct: 128 QTWKLL 133


>gi|262166485|ref|ZP_06034222.1| general secretion pathway protein A [Vibrio mimicus VM223]
 gi|262026201|gb|EEY44869.1| general secretion pathway protein A [Vibrio mimicus VM223]
          Length = 529

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 12/111 (10%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIA-----FYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
            +  D    ++  +      + +       Y  +L +GG+     R L  G     V  L
Sbjct: 411 RLNADEAELLVGDQRYRIARQWLEPLWHGQY-SLLWQGGF----SRTLKQGMQGADVALL 465

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +L     L   +     FD  +   V+LFQ    +   G+    TL  +
Sbjct: 466 ESKLSQV--LGEPERPRDQFDKDLSRKVELFQRWQNMQVDGIAGRQTLRRL 514


>gi|258645663|ref|ZP_05733132.1| putative cell wall lytic activity [Dialister invisus DSM 15470]
 gi|260403030|gb|EEW96577.1| putative cell wall lytic activity [Dialister invisus DSM 15470]
          Length = 429

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN    +  L++RL  +G L  +      +     +AVK FQ  H L  SG VD  TL  
Sbjct: 106 GNRGDMIAELQDRLAAAGYLTGASDG--IYGGDTAAAVKQFQKDHRLPVSGAVDEQTLSL 163

Query: 165 M 165
           +
Sbjct: 164 L 164



 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    LH+G    +V+ L+  L+ +G L  ++ +   + +    AV  FQ  HGL  +G
Sbjct: 20  SVSAEILHMGMRGAAVESLQNDLVEAGYL--ARTVDGDYGSTTVKAVSEFQKDHGLPVTG 77

Query: 156 MVDSSTLEAM 165
             D ST   +
Sbjct: 78  KADDSTQAKL 87



 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    ++ L+ +L  +G LD        +    ESAV+  Q  HGL  +G VD +T + 
Sbjct: 195 GDRGSEIKTLQNKLRRAGYLDGEADG--IYGNDTESAVRALQEEHGLSVTGNVDDATWKL 252

Query: 165 M 165
           +
Sbjct: 253 L 253



 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L  G+    V +L+ RL++ G      G    + A    AV+  Q    L+ +GM D+
Sbjct: 263 GTLKAGDRGKRVVKLQNRLLLHGY--NPGGSDGIYGAATAEAVRKLQAEEKLERTGMADT 320

Query: 160 STLEAM-NVP 168
           +  E + N P
Sbjct: 321 NVWERLENAP 330


>gi|115379890|ref|ZP_01466951.1| hypothetical protein STIAU_1822 [Stigmatella aurantiaca DW4/3-1]
 gi|310817668|ref|YP_003950026.1| hypothetical protein STAUR_0390 [Stigmatella aurantiaca DW4/3-1]
 gi|115363106|gb|EAU62280.1| hypothetical protein STIAU_1822 [Stigmatella aurantiaca DW4/3-1]
 gi|309390740|gb|ADO68199.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 586

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPS--KGLSVAFDAYVESAVKLFQMRHGLDP 153
            LP + L  G+    V++L++ L+  G +  +        F    E+A+K FQ  HG+D 
Sbjct: 326 TLPNQQLKRGSKGEGVEKLQDALVKLGYMTKAQVATGPGTFGPKTEAALKKFQKDHGVDA 385

Query: 154 SGMVDSSTLEA 164
            G     T  A
Sbjct: 386 IGEYGPKTRAA 396


>gi|304316200|ref|YP_003851345.1| NLP/P60 protein [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
 gi|302777702|gb|ADL68261.1| NLP/P60 protein [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
          Length = 226

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V  L++ L   G    + G+   F +   +AV   Q + GL P G+V  +T
Sbjct: 28  LKYGSRGQAVVSLQQTLNRLGY--NTGGIDGIFGSATRNAVIALQKKFGLSPDGIVGPAT 85

Query: 162 LEAMNVPV 169
              +N  V
Sbjct: 86  EAVLNRTV 93


>gi|90411905|ref|ZP_01219913.1| putative general secretion pathway protein A [Photobacterium
           profundum 3TCK]
 gi|90327163|gb|EAS43535.1| putative general secretion pathway protein A [Photobacterium
           profundum 3TCK]
          Length = 521

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      +  G     V  L ++L     L  ++  S  F   V   ++ FQ    L   
Sbjct: 437 PHGSKTTIRYGQQGPRVAWLSQQLNS--FLGETQTHSDYFGQSVLDKLRRFQRSQDLAAD 494

Query: 155 GMVDSSTL----EAMNVP 168
           G+    TL     A+N+P
Sbjct: 495 GIAGPLTLMVLDSALNLP 512


>gi|197285269|ref|YP_002151141.1| peptidoglycan-binding protein [Proteus mirabilis HI4320]
 gi|194682756|emb|CAR42976.1| putative peptidoglycan-binding protein [Proteus mirabilis HI4320]
          Length = 305

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 42/175 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L    + G       + +G++ R+TP + + +++++ +P W  P + I+K+
Sbjct: 98  IVINLAELRLYYYPKEGGTVDVYPIGIGQLGRETPEMVTSVSQLIKDPTWT-PTANIRKN 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             A     P  +                                    G  N M +  + 
Sbjct: 157 YAAKGITLPAVV----------------------------------PAGPDNPMGAYALR 182

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                  Y +H T     F   +R  +SGC+R+    D+   L    P  SR  +
Sbjct: 183 LAHSRGEYLIHGTNAD--FGIGLR-VSSGCIRL-RPDDI-ETLFNVVPKGSRVQV 232


>gi|197117361|ref|YP_002137788.1| peptidoglycan L,D-transpeptidase [Geobacter bemidjiensis Bem]
 gi|197086721|gb|ACH37992.1| peptidoglycan L,D-transpeptidase, YkuD family, LysM
           domain-containing protein [Geobacter bemidjiensis Bem]
          Length = 307

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 52/173 (30%), Gaps = 46/173 (26%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKV--GLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            ++ +      ++VN+    L     GK        + +G    +TP+    + + + +P
Sbjct: 100 WIVPRVQSDPDIVVNLAEYRLYLFPQGKFGAVFTFPLGIGDEGAETPLGTYTVIQKITSP 159

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI                  +                      E P       P
Sbjct: 160 SWHVPDSI-----------------RH----------------------EVPGLPSIVPP 180

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           G  N + +  +   SR N  +H T  P          + GC+R+    D+   
Sbjct: 181 GPSNPLGTHALRL-SRANILIHGTNRPWGIGRRS---SHGCLRL-YPEDIATL 228


>gi|303238375|ref|ZP_07324910.1| spore cortex-lytic enzyme [Acetivibrio cellulolyticus CD2]
 gi|302594079|gb|EFL63792.1| spore cortex-lytic enzyme [Acetivibrio cellulolyticus CD2]
          Length = 234

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 16/117 (13%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
            LA + + I S   I +        KA+  Y+  LS              G++   V+ +
Sbjct: 7   LLAAISLAIVSL--ITTTYIYRSDIKALFQYKAALSY------------YGSTGQEVKNI 52

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           + +L   G  D +      +  Y  +AV+ FQ ++GL   G+    TL A+ +    
Sbjct: 53  QYKLSNWGYYDGAIDGEYGYKTY--TAVRSFQYKNGLTVDGVAGPETLSALGLSTGA 107


>gi|227355699|ref|ZP_03840092.1| ErfK/YbiS/YcfS/YnhG family protein [Proteus mirabilis ATCC 29906]
 gi|227164018|gb|EEI48915.1| ErfK/YbiS/YcfS/YnhG family protein [Proteus mirabilis ATCC 29906]
          Length = 305

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 42/175 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L    + G       + +G++ R+TP + + +++++ +P W  P + I+K+
Sbjct: 98  IVINLAELRLYYYPKEGGTVDVYPIGIGQLGRETPEMVTSVSQLIKDPTWT-PTANIRKN 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             A     P  +                                    G  N M +  + 
Sbjct: 157 YAAKGITLPAVV----------------------------------PAGPDNPMGAYALR 182

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                  Y +H T     F   +R  +SGC+R+    D+   L    P  SR  +
Sbjct: 183 LAHSRGEYLIHGTNAD--FGIGLR-VSSGCIRL-RPDDI-ETLFNVVPKGSRVQV 232


>gi|295703756|ref|YP_003596831.1| endopeptidase LytF [Bacillus megaterium DSM 319]
 gi|294801415|gb|ADF38481.1| endopeptidase LytF (cell wall hydrolase) [Bacillus megaterium DSM
           319]
          Length = 303

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G +   V+ L++ L   G    S   +  F +  + +V  FQ  H L   G
Sbjct: 24  ALGDKLLKEGMTDPDVKELQDVLRQKG--IFSATSTGYFGSITKDSVLSFQRSHSLTADG 81

Query: 156 MVDSSTLEAM 165
           +V S+T +A+
Sbjct: 82  IVGSNTYQAL 91



 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           YQ ++            L  G +S  V+++++ L   G  + +   +  F    ++ V  
Sbjct: 88  YQALIGNSTSTVTNGTLLKYGMTSNEVEKVQQLLKEKGYFNATP--TGYFGTVTQTVVMN 145

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           FQ  HGL   G+V  +T  A+
Sbjct: 146 FQRDHGLAVDGIVGPATSNAL 166


>gi|282848940|ref|ZP_06258329.1| 3D domain protein [Veillonella parvula ATCC 17745]
 gi|282581215|gb|EFB86609.1| 3D domain protein [Veillonella parvula ATCC 17745]
          Length = 202

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L     +   +    E AV+ FQ   GL   G V 
Sbjct: 24  AKTIDRGQRGHHVSKVQTMLKHQGFLH--DSIDGIYGHNTEQAVRKFQKSKGLPVDGRVG 81

Query: 159 SSTLEAM 165
            +T+ A+
Sbjct: 82  PATMNAL 88


>gi|156973179|ref|YP_001444086.1| Type II secretory pathway, component ExeA [Vibrio harveyi ATCC
           BAA-1116]
 gi|156524773|gb|ABU69859.1| hypothetical protein VIBHAR_00859 [Vibrio harveyi ATCC BAA-1116]
          Length = 541

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     ++  L + L  +  ++     S  +D  ++  V+LFQ   G+  
Sbjct: 453 WQAPLKDTLRLDMEGPAIDVLDQLLAQA--VNEQPLGSDIYDGALKERVELFQRWQGIGV 510

Query: 154 SGMVDSSTLEAMNVPVDLRIRQL-QVNLM 181
            G+    TLE +   V +   QL Q+N  
Sbjct: 511 DGIAGKHTLERLQQSVQIDAPQLKQINEE 539


>gi|38638635|ref|NP_944336.1| gp28 [Burkholderia phage Bcep1]
 gi|34486017|gb|AAQ73374.1| gp28 [Burkholderia phage Bcep1]
          Length = 255

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 24/107 (22%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +G S  +V  L+ RL +          S  FDA V +A++ +Q  HG+ P G+  
Sbjct: 2   AAPLIVGASGRAVVFLQARLGL--------AQSGQFDASVATALRQWQEAHGMTPDGVYG 53

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           S T   M       +  +     R++             V++PA   
Sbjct: 54  SQTNAVM---TARALSDIADAAARLR-------------VDVPAFQA 84


>gi|304559115|gb|ADM41779.1| hypothetical protein ETAF_1671 [Edwardsiella tarda FL6-60]
          Length = 346

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 47/208 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     G+  +    + +G++ R TP + +R+++ + +P W
Sbjct: 62  MLLPDTPREGIVINLAELRLFYYPPGENRVEVYPIGIGQLGRNTPEMVTRVSQHIKDPTW 121

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
               +I                   +                     +  +       G 
Sbjct: 122 TPTANI-----------------RRHYQ------------------AQGISLPAVMPAGP 146

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +   ++   Y +H T     F   +R  +SGC+R+    D+   L +  P  
Sbjct: 147 DNPMGRFALRLAAQGGVYLIHGTNAD--FGIGMR-VSSGCIRL-RPGDI-EALFRSVPGG 201

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R  I     +  V+      V++   +
Sbjct: 202 TRVQIVNQPVKTSVEPDGKRYVEVHQPL 229


>gi|291533118|emb|CBL06231.1| Cell wall-associated hydrolases (invasion-associated proteins)
           [Megamonas hypermegale ART12/1]
          Length = 204

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 6/78 (7%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
                 LG+    +  ++  L   G    + G    F    ++AV  FQ  +GLD  G+V
Sbjct: 6   SASSFRLGDQGAEIAEIQAALASQGYDVTADGD---FGPATQAAVAAFQSANGLDNDGLV 62

Query: 158 DSSTLEAM---NVPVDLR 172
            + T + +   N+PV  R
Sbjct: 63  GAMTYQTLMGRNMPVVSR 80


>gi|188993381|ref|YP_001905391.1| putative peptidoglycan binding protein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167735141|emb|CAP53353.1| putative peptidoglycan binding protein [Xanthomonas campestris pv.
           campestris]
          Length = 453

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVD 158
             L        V+ L+E+L   G LD    +   +    E+AV+ FQ  + L    G   
Sbjct: 254 GVLKRNEQGAPVKELQEKLSKLGYLDAKDAIGT-YGPKTEAAVEKFQQENRLKGVDGKAG 312

Query: 159 SSTLEAM--NVPVDLRIRQLQ 177
             TL ++  NV     + QL+
Sbjct: 313 PETLASIDKNVQRQEGVEQLR 333


>gi|21233230|ref|NP_639147.1| hypothetical protein XCC3802 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770172|ref|YP_244934.1| hypothetical protein XC_3874 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21115073|gb|AAM43048.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575504|gb|AAY50914.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 453

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVD 158
             L        V+ L+E+L   G LD    +   +    E+AV+ FQ  + L    G   
Sbjct: 254 GVLKRNEQGAPVKELQEKLSKLGYLDAKDAIGT-YGPKTEAAVEKFQQENRLKGVDGKAG 312

Query: 159 SSTLEAM--NVPVDLRIRQLQ 177
             TL ++  NV     + QL+
Sbjct: 313 PETLASIDKNVQRQEGVEQLR 333


>gi|297201860|ref|ZP_06919257.1| serine/threonine protein kinase [Streptomyces sviceus ATCC 29083]
 gi|297147990|gb|EDY56806.2| serine/threonine protein kinase [Streptomyces sviceus ATCC 29083]
          Length = 559

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G+    V +++  L   G      G+   F    +SAVK FQ   GL+  G V  +T  
Sbjct: 494 YGDKGQRVVQVQCMLTKRGYSVGGSGVDGEFGRDTQSAVKQFQSAKGLEVDGQVGPNTWA 553

Query: 164 AM 165
           A+
Sbjct: 554 AL 555


>gi|331268987|ref|YP_004395479.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum BKT015925]
 gi|329125537|gb|AEB75482.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum BKT015925]
          Length = 307

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 22/139 (15%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG 93
           S++ + IN   HSI N+ ++  L++    ++ +    +   I + +              
Sbjct: 35  SLIKKSINTESHSIENNTYEKKLSQNKNTLEKNKNNPAVSEIKEKK-------------- 80

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
                  PL LG+    V+ L+++L   G    S G    F    E+A+  FQ R+ L  
Sbjct: 81  -----FTPLKLGSRGNEVKTLQQKLNKFGYKINSDG---IFGDSTETAIYDFQKRNDLAR 132

Query: 154 SGMVDSSTLEAMNVPVDLR 172
            G+   STL+ +++    +
Sbjct: 133 DGIPGKSTLKKLDLEPTEK 151


>gi|261343983|ref|ZP_05971628.1| ErfK/YbiS/YcfS/YnhG family protein [Providencia rustigianii DSM
           4541]
 gi|282568374|gb|EFB73909.1| ErfK/YbiS/YcfS/YnhG family protein [Providencia rustigianii DSM
           4541]
          Length = 349

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 42/185 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        V++N+    L     N K  +   + +G++ R TP + + I++++ +P W
Sbjct: 88  MLLPSTPRTGVVINLAELRLYYFPANSKKVIVYPIGIGQLGRDTPEMVTSISQLIKDPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P + I+K           +     I +                             G 
Sbjct: 148 T-PTTNIRK-----------HYAKQGITL-----------------------PAVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +        Y +H T     F   +R  +SGC+R+    D+   L K  P  
Sbjct: 173 ENPMGLYALRLSYGKGEYLIHGTNAD--FGIGMR-VSSGCIRL-RPHDI-EALFKSVPKG 227

Query: 364 SRYHI 368
           +R  +
Sbjct: 228 TRVQV 232


>gi|212633984|ref|YP_002310509.1| ATPase [Shewanella piezotolerans WP3]
 gi|212555468|gb|ACJ27922.1| ATPase [Shewanella piezotolerans WP3]
          Length = 531

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 94  WPELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +   +G S+    +Q L   L I  +   S  L   FD+++E  VK FQ +HGL
Sbjct: 442 WQAPKSQVNEIGKSANQAQLQWLENSLAIINE--SSPRLVSEFDSHLEQKVKEFQRQHGL 499

Query: 152 DPSGMVDSSTLEAMN 166
              G+  + TL  +N
Sbjct: 500 RADGIAGAQTLVQLN 514


>gi|75907469|ref|YP_321765.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701194|gb|ABA20870.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 508

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 18/101 (17%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G++  +V RL++RL   G   P+   +  F +    AV  FQ   GL  +G+
Sbjct: 213 VKSPVLSEGSTGQAVTRLQQRLRQLGYFSPNPTGN--FRSITRDAVMAFQRNAGLPITGV 270

Query: 157 VDSSTLEAM-------NVP----VDLRIRQLQVNLMRIKKL 186
           V+  T  A+       N P      +R  Q      R++ L
Sbjct: 271 VNQQTWNALGGVAQVPNRPGLSTPQVRDLQ-----QRLRDL 306



 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+   +V+ +++RL   G    S  L   FD Y  ++V  FQ  + L+P+G VDS T
Sbjct: 365 LTVGDRGNNVRAVQQRLTQLGFFTGS--LDGYFDEYTRASVASFQQYYQLNPTGNVDSQT 422

Query: 162 LEAMNV 167
            +A+N+
Sbjct: 423 WQALNI 428



 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 20/110 (18%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G++   V  ++  L   G  +    ++  F +   S V  FQ  + L   G+V   T 
Sbjct: 65  KVGSTGSEVAEIQRCLKKLGFFNG--PVNGRFASITRSGVIGFQRANRLAADGVVGGGTQ 122

Query: 163 EAMNV-----------PVDLRI-------RQLQVNLMRIKKLLEQKMGLR 194
            A+               DLR+        QLQ NL R++       G  
Sbjct: 123 RALQRACRSATPGAINSSDLRLGSRGVAVSQLQQNLRRLRYFNGPNTGYF 172



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 6/123 (4%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ-TEKAIAFYQDILSRGGWPELPIRPL 102
           ++  VN RF +      +G      + +   +   T++A+       + G    +    L
Sbjct: 86  FNGPVNGRFASITRSGVIGFQRANRLAADGVVGGGTQRALQRACRSATPG---AINSSDL 142

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG+  V+V +L++ L      +     +  F +  + AV  FQ  + +   G+V S T 
Sbjct: 143 RLGSRGVAVSQLQQNLRRLRYFNGPN--TGYFGSETQQAVIRFQRANRIGADGIVGSQTA 200

Query: 163 EAM 165
           +A+
Sbjct: 201 QAI 203



 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           + GG  ++P RP   G S+  V+ L++RL   G  + +   S+        A+  FQ  +
Sbjct: 278 ALGGVAQVPNRP---GLSTPQVRDLQQRLRDLGYFNGNPTGSIG--VMTRDAIVRFQRDY 332

Query: 150 GLDPSGMVDSSTLEAMNVPVDLR 172
            L   G+ D   L+A++   + R
Sbjct: 333 RLTADGIADVQILQAVSRVWEDR 355


>gi|119512681|ref|ZP_01631754.1| hypothetical protein N9414_14468 [Nodularia spumigena CCY9414]
 gi|119462648|gb|EAW43612.1| hypothetical protein N9414_14468 [Nodularia spumigena CCY9414]
          Length = 188

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
            S + +  D+  + + +  +   S     +  T A+++  I        R   P LP   
Sbjct: 68  SSAYQLAKDKLLDKIRKKHLSPGSLTLAKNHYTQAKSQNGIKVAARSSPRFSGPALP--T 125

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+S  SV+ L+  L+ +G      G   AF    E+AVK FQ +  L   G+V   T
Sbjct: 126 LRFGSSGTSVRVLQRLLVSNGYAIRVDG---AFGPLTETAVKAFQNQRSLGVDGIVGPVT 182

Query: 162 LEAMNV 167
            + + +
Sbjct: 183 WQQLTI 188


>gi|296330534|ref|ZP_06873012.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305674583|ref|YP_003866255.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage-related protein
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152216|gb|EFG93087.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305412827|gb|ADM37946.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage-related protein
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 325

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             P+  G+    V+++++ L            + G+   +     +AVK FQ  HGL   
Sbjct: 253 TSPMRKGD---DVRQIQKALAALYFYPDKGAKNNGIDGVYGPKTANAVKRFQSMHGLTAD 309

Query: 155 GMVDSSTLEAM 165
           G+    T   +
Sbjct: 310 GIYGPKTKAKL 320


>gi|294791578|ref|ZP_06756726.1| LysM domain protein [Veillonella sp. 6_1_27]
 gi|294456808|gb|EFG25170.1| LysM domain protein [Veillonella sp. 6_1_27]
          Length = 189

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L     +   +    E AV+ FQ   GL   G V 
Sbjct: 11  AKTIDRGQRGHHVSKVQTMLKHQGFLH--DSIDGIYGHNTEQAVRKFQKSKGLPVDGRVG 68

Query: 159 SSTLEAM 165
            +T+ A+
Sbjct: 69  PATMNAL 75


>gi|294793432|ref|ZP_06758569.1| LysM domain protein [Veillonella sp. 3_1_44]
 gi|294455002|gb|EFG23374.1| LysM domain protein [Veillonella sp. 3_1_44]
          Length = 189

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L     +   +    E AV+ FQ   GL   G V 
Sbjct: 11  AKTIDRGQRGHHVSKVQTMLKHQGFLH--DSIDGIYGHNTEQAVRKFQKSKGLPVDGRVG 68

Query: 159 SSTLEAM 165
            +T+ A+
Sbjct: 69  PATMNAL 75


>gi|301059524|ref|ZP_07200437.1| putative Protein ErfK/srfK [delta proteobacterium NaphS2]
 gi|300446419|gb|EFK10271.1| putative Protein ErfK/srfK [delta proteobacterium NaphS2]
          Length = 259

 Score = 57.5 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 48/165 (29%), Gaps = 49/165 (29%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAV-ENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFN 241
           + +L ++   R +++N+    L     +G    +   V +G  D  TP     +     N
Sbjct: 53  QWILPER-NFRGIVINVAELRLYYYFNDGCPRVMTFPVGIGDRDWPTPAGRFTVREKRVN 111

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W IP S+                      +                            
Sbjct: 112 PTWFIPPSL-----------------REKYQVRSI------------------------P 130

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           PG  N +    I   +      H T  P    +V R  T GC+R+
Sbjct: 131 PGPDNPLGRYWIGIGNDYGI--HGTDLPW---SVGRLVTRGCIRL 170


>gi|159898674|ref|YP_001544921.1| peptidoglycan binding domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159891713|gb|ABX04793.1| Peptidoglycan-binding domain 1 protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 319

 Score = 57.5 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 9/95 (9%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           ++   W  +       G+S  +V  ++  L   G    S  +   F A   SAVK FQ  
Sbjct: 29  VAARTWATVSN-----GDSGDNVYTVQAMLKQRGY---SLTVDGDFGAGTLSAVKSFQSS 80

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN-LMR 182
            GL   G+V  +T E + + V      + VN L R
Sbjct: 81  KGLSADGVVGPNTWEQLVITVRQGDNNIVVNALQR 115



 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W +L I  +  G++++ V  L+ +L   G    S  +   F A   SAVK FQ   GL  
Sbjct: 94  WEQLVI-TVRQGDNNIVVNALQRQLKKHGH---SLTVDGDFGAGTLSAVKSFQSSKGLGA 149

Query: 154 SGMVDSSTLEAMNVPV 169
            G+V + T  A+    
Sbjct: 150 DGIVGADTWAALTGNP 165


>gi|309811412|ref|ZP_07705199.1| peptidoglycan binding domain protein [Dermacoccus sp. Ellin185]
 gi|308434719|gb|EFP58564.1| peptidoglycan binding domain protein [Dermacoccus sp. Ellin185]
          Length = 370

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 16/80 (20%)

Query: 94  WPELPIRPLHL--------GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           W  L               G+S   V+ ++ +L +         +   F    ESAV  F
Sbjct: 124 WAALDASSAQPSAGDVVRRGDSGPLVRAIQSKLGV--------NVDGVFGPLTESAVMTF 175

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q  HGL   G+V + T  A+
Sbjct: 176 QRSHGLGVDGVVGAKTTYAL 195



 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 8/70 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +   +V+ L+ RL +         +   +     +AVK FQ  + LD  G+V   T
Sbjct: 72  LTFDSRGEAVKTLQARLALV--------VDGWYGPVTTAAVKDFQRANRLDVDGVVGPRT 123

Query: 162 LEAMNVPVDL 171
             A++     
Sbjct: 124 WAALDASSAQ 133


>gi|326790802|ref|YP_004308623.1| peptidoglycan-binding protein [Clostridium lentocellum DSM 5427]
 gi|326541566|gb|ADZ83425.1| Peptidoglycan-binding domain 1 protein [Clostridium lentocellum DSM
           5427]
          Length = 437

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL LG+S  +V+ ++    R+  +  L P   +   F+   + AVK FQ    L   
Sbjct: 353 PGSPLRLGDSGPAVRTIQMQLNRISQNFPLIPKVAVDGNFNEATQEAVKTFQKIFHLPQD 412

Query: 155 GMVDSSTLEAM 165
           G+V  ST   +
Sbjct: 413 GIVGKSTWYEI 423


>gi|190572347|ref|YP_001970192.1| putative peptidoglycan-binding motif protein [Stenotrophomonas
           maltophilia K279a]
 gi|190010269|emb|CAQ43877.1| putative peptidoglycan-binding motif protein [Stenotrophomonas
           maltophilia K279a]
          Length = 593

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 9/87 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV----AFDAYVESAVKLFQMRHGLDP- 153
            + L  G+S   V +L   L+  G        ++     FDA    AV+ FQ  H LDP 
Sbjct: 301 SQTLKEGSSGRDVLKLESNLVTLGYASAGGQQTLNPDRRFDATTRKAVEDFQRAHNLDPV 360

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNL 180
            G    +TL A+    D   R+LQ NL
Sbjct: 361 DGKAGPATLAAI----DRDARELQGNL 383



 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV----ESAVKLFQMRHGLDPSGMVDSST 161
           +       L+  L   G L  +KG ++  D Y+      A+  FQ +HGL  +G+ D+ T
Sbjct: 373 DRDAR--ELQGNLAALG-LTDAKGQAIGSDGYLGGGSRHAINAFQQQHGLPATGIADAET 429

Query: 162 LEAMNVPVDLRIR 174
            +A+   V  R +
Sbjct: 430 RQALANEVQQRAQ 442


>gi|294500739|ref|YP_003564439.1| Endopeptidase [Bacillus megaterium QM B1551]
 gi|294350676|gb|ADE71005.1| Endopeptidase [Bacillus megaterium QM B1551]
          Length = 225

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G +   V++L++ L   G    +            SAVK FQ ++GL   G
Sbjct: 25  ALGDQTLRQGMNHQDVKQLQQTLKNKGYFKGNTTTYFG--TVTTSAVKSFQRKNGLAADG 82

Query: 156 MVDSSTLEAMNV 167
           +V   T   + V
Sbjct: 83  IVGKGTYAKLGV 94


>gi|51892856|ref|YP_075547.1| polysaccharide deacetylase [Symbiobacterium thermophilum IAM 14863]
 gi|51856545|dbj|BAD40703.1| polysaccharide deacetylase [Symbiobacterium thermophilum IAM 14863]
          Length = 328

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            + +R L  G++  +V  L+  L  +G       +   F    E+AV   Q  +GL   G
Sbjct: 33  AVSVRALRFGDAGPAVAELQRLLAANGF--DPGPVDGIFGPLTEAAVLAAQRHYGLTVDG 90

Query: 156 MVDSSTLEAMNVPVDL 171
           +    T+ A+      
Sbjct: 91  LAGRMTVGALQSRPQA 106


>gi|125974900|ref|YP_001038810.1| cell wall hydrolase, SleB [Clostridium thermocellum ATCC 27405]
 gi|256003843|ref|ZP_05428830.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 2360]
 gi|281418634|ref|ZP_06249653.1| spore cortex-lytic enzyme [Clostridium thermocellum JW20]
 gi|125715125|gb|ABN53617.1| cell wall hydrolase, SleB [Clostridium thermocellum ATCC 27405]
 gi|255992181|gb|EEU02276.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 2360]
 gi|281407718|gb|EFB37977.1| spore cortex-lytic enzyme [Clostridium thermocellum JW20]
 gi|316939111|gb|ADU73145.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 1313]
          Length = 233

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 3/94 (3%)

Query: 91  RGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
            G +  +PI   L     +  V RL++RL      D    ++  +D     AV+ FQ  +
Sbjct: 25  NGRFFIVPITERLAPNMQNEDVVRLQQRLKNWEYYDG--KITGVYDFKTYLAVRDFQKTY 82

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
            L  +G+    TL AM +    R  +++    RI
Sbjct: 83  NLPVTGIAGEETLAAMGLTTLSRWSEVRAQSSRI 116


>gi|326497859|dbj|BAJ94792.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518943|dbj|BAJ92632.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326528353|dbj|BAJ93358.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 369

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLS---VAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           H+G+    + RL++ L   G L  +   S    AFDA +E+AV  +Q   GL+ +G++D 
Sbjct: 55  HMGDERDGLARLKDYLSHFGYLSEAPTSSPFSDAFDAELEAAVATYQRNFGLNATGVLDP 114

Query: 160 STLEAMNVP 168
            T+  M  P
Sbjct: 115 PTVSQMVAP 123


>gi|296133608|ref|YP_003640855.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR]
 gi|296032186|gb|ADG82954.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR]
          Length = 318

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 18/128 (14%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM- 165
           S   V   ++ L   G       L   +     +AVK FQ  + L  +G ++ +TL  + 
Sbjct: 55  SGSEVMDFQQALQYLGFYRG--KLDGVYGLQTYNAVKKFQRSNKLPVNGSINVATLRVLK 112

Query: 166 ---NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
              ++P+  + R             +   G   + V+I   +L   ++ KV     V VG
Sbjct: 113 KYFDLPLATKTRT------------KGPKGEVRLEVHIKTRTLIVYDDDKVFKTYRVAVG 160

Query: 223 RVDRQTPI 230
           +    TP+
Sbjct: 161 KNKTPTPV 168



 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G     V +++++L   G L  +      +     +AVK FQ  H    +G VD
Sbjct: 255 LRRGYKGSDVYQVQQKLRELGYLKSTPDG--IYGPATIAAVKKFQKDHDFPVTGEVD 309


>gi|302876319|ref|YP_003844952.1| Peptidase M15A [Clostridium cellulovorans 743B]
 gi|307687054|ref|ZP_07629500.1| Peptidase M15A [Clostridium cellulovorans 743B]
 gi|302579176|gb|ADL53188.1| Peptidase M15A [Clostridium cellulovorans 743B]
          Length = 220

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 4/72 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V  L+++LI  G      G    F  Y   AVK  Q   G+   G+V S+T
Sbjct: 32  LQSGSTGAEVTALQQKLIRLGFYLGPSGADGDFGQYTVDAVKGIQSASGITTDGIVGSAT 91

Query: 162 ----LEAMNVPV 169
                E ++ P 
Sbjct: 92  NTKITEWLSKPA 103


>gi|269960198|ref|ZP_06174573.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835005|gb|EEZ89089.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 541

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     ++  L + L  +  ++     S  +D  ++  V+LFQ   G+  
Sbjct: 453 WQAPLKDTLRLDMEGPAIDVLDQLLAQA--VNEQPLGSDIYDGALKERVELFQRWQGIGV 510

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ 177
            G+    TL+ +   V +   QL+
Sbjct: 511 DGIAGQRTLDRLQQSVQMDAPQLK 534


>gi|307266815|ref|ZP_07548338.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918156|gb|EFN48407.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 327

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+    V  L+ RL           +   F    E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDKGPFVVNLQARLKSLSF--DPGPIDGIFGRKTEEAVKAYQQSRGLPVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|291299342|ref|YP_003510620.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568562|gb|ADD41527.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 323

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 11/88 (12%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LGN       ++  L  +G        + AFDA  ESAVK FQ   GLD  G+V   T E
Sbjct: 41  LGNRGADTLSVQHLLAQAGH---QVEATGAFDAATESAVKKFQESKGLDADGIVGPKTWE 97

Query: 164 AM--NVPV-----DLRIRQLQVNL-MRI 183
           A+  N+        ++  Q+Q+N   R+
Sbjct: 98  ALAPNLETGASGEAVKALQVQLNAKQRL 125



 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 11/98 (11%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
           A TE A+  +Q+        I+    W  L    L  G S  +V+ L+ +L     L  S
Sbjct: 70  AATESAVKKFQESKGLDADGIVGPKTWEALAPN-LETGASGEAVKALQVQLNAKQRL--S 126

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             ++  FD  +   V+ FQ    +  +G V+  T   +
Sbjct: 127 LEVNGTFDDALAGEVRKFQEHAKISATGAVNVETWRNL 164


>gi|119943964|ref|YP_941644.1| general secretion pathway ATPase protein [Psychromonas ingrahamii
           37]
 gi|119862568|gb|ABM02045.1| General secretion pathway ATPase protein [Psychromonas ingrahamii
           37]
          Length = 584

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 47/141 (33%), Gaps = 4/141 (2%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIA 83
           LS   +      L ++   S   +  D  ++  A +    DS   +I  + I  +E    
Sbjct: 427 LSCYSENTSLKKLKQLNYPSVVRLERDNLESLHAVLYAINDSYQLLIDGQVIEVSETWFN 486

Query: 84  FYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
            Y        W  P      L  G  S  +  L  +L     +         FD  +   
Sbjct: 487 TYWSGELTVLWQAPFELQGNLKFGQQSEQIAWLARQLNKLQGMPIESK--NRFDLPLLQQ 544

Query: 142 VKLFQMRHGLDPSGMVDSSTL 162
           V  FQ+ +GL   G+V   TL
Sbjct: 545 VMRFQIENGLKDDGIVGERTL 565


>gi|226330340|ref|ZP_03805858.1| hypothetical protein PROPEN_04257 [Proteus penneri ATCC 35198]
 gi|225201135|gb|EEG83489.1| hypothetical protein PROPEN_04257 [Proteus penneri ATCC 35198]
          Length = 305

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 42/175 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L    + G       + +G++ R+TP + + I++++ +P W  P + I+K+
Sbjct: 98  IVINLAELRLYYYPKEGGTVDVYPIGIGQLGRETPEMVTSISQLIKDPTWT-PTANIRKN 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             A     P  +                                    G  N M +  + 
Sbjct: 157 YAAKGITLPAVV----------------------------------PAGPENPMGAYALR 182

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                  Y +H T     F   +R  +SGC+R+    D+   L    P  SR  +
Sbjct: 183 LAHSRGEYLIHGTNAD--FGIGLR-VSSGCIRL-RPNDI-ETLFNVVPKGSRVQV 232


>gi|312971054|ref|ZP_07785233.1| peptidoglycan-binding domain 1 domain protein [Escherichia coli
           1827-70]
 gi|310336815|gb|EFQ01982.1| peptidoglycan-binding domain 1 domain protein [Escherichia coli
           1827-70]
          Length = 282

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 49/139 (35%), Gaps = 33/139 (23%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLDPSKGL 130
             LRE L  +G LD  + L
Sbjct: 253 PALREILQRTGMLDGGRKL 271


>gi|312200969|ref|YP_004021030.1| cell wall hydrolase/autolysin [Frankia sp. EuI1c]
 gi|311232305|gb|ADP85160.1| cell wall hydrolase/autolysin [Frankia sp. EuI1c]
          Length = 371

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 23/139 (16%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
           +    A V DE ++ +  +        F     + +D    II  +T    E+A    + 
Sbjct: 26  DGATRAEVFDEDLDRAVRA--------FQQSRGLSVDG---IIGPDTARSLEEA----RH 70

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQ 146
            L        P +PL +G+    V  L+ERL   G D+  S G    F    ESAV+ FQ
Sbjct: 71  GLGDRLLYHAPSQPL-IGD---DVAALQERLSNMGFDVGRSDG---IFGPRTESAVRDFQ 123

Query: 147 MRHGLDPSGMVDSSTLEAM 165
              GL+P G     TL  +
Sbjct: 124 RNRGLEPDGRCGPHTLREL 142


>gi|167039388|ref|YP_001662373.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           sp. X514]
 gi|300914030|ref|ZP_07131347.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307725285|ref|YP_003905036.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|166853628|gb|ABY92037.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X514]
 gi|300890715|gb|EFK85860.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307582346|gb|ADN55745.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
          Length = 1089

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG++   V+ L+E L I G    S      F    ++AVK FQ ++GL   G+V   T
Sbjct: 319 LKLGSTGNGVKILQETLNIIGY---SLVEDGQFGTRTQAAVKDFQSKNGLTVDGIVGPQT 375

Query: 162 LEAM 165
            + +
Sbjct: 376 WQKL 379


>gi|308270996|emb|CBX27606.1| hypothetical protein N47_H24280 [uncultured Desulfobacterium sp.]
          Length = 322

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 55/165 (33%), Gaps = 48/165 (29%)

Query: 186 LLEQKMGLRY-VLVNIPAASLEAV--ENGKVGLRSTVIVGRVDRQTPI-LHSRINRIMFN 241
            +   +G+R+ +++N+    L     ++ K  +   V +G   + TP+ + S I +I  N
Sbjct: 110 WILPDIGIRHGIVINVAEMRLYYFPDDDTKSVITYPVGIGDEGKDTPLGIFSVIEKIK-N 168

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W +P+SI                                         E P       
Sbjct: 169 PAWYVPKSI---------------------------------------QLEKPELPAVVP 189

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           PG  N M S  +   S     +H T  P          + GC+R+
Sbjct: 190 PGPDNPMGSRALRL-SIWTVLIHGTNRPWGIGTRN---SHGCIRM 230


>gi|315648072|ref|ZP_07901173.1| spore cortex-lytic enzyme [Paenibacillus vortex V453]
 gi|315276718|gb|EFU40061.1| spore cortex-lytic enzyme [Paenibacillus vortex V453]
          Length = 271

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + +  G++   V  L+ RL   G       +   F +  + AVK FQ   G+   
Sbjct: 39  PTFSQQTIKFGSTGEDVYELQGRLKYLGFYHG--KIDSVFGSKTQGAVKWFQSEFGMKVD 96

Query: 155 GMVDSSTLEAM-NVPVDLR 172
           G+V       + N   D R
Sbjct: 97  GVVGPKVKLKLYNATKDFR 115


>gi|227889892|ref|ZP_04007697.1| S41A family carboxy-terminal peptidase [Lactobacillus johnsonii
           ATCC 33200]
 gi|227849336|gb|EEJ59422.1| S41A family carboxy-terminal peptidase [Lactobacillus johnsonii
           ATCC 33200]
          Length = 483

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G +   K ++  FD   ++AV  FQ  HGL   G+V+   
Sbjct: 394 LKKSMTGVDVATLQQYLTALGYMP--KYVTGVFDDKTKNAVIEFQKAHGLTADGIVNGQV 451

Query: 162 LEAMNVPVDLRIR 174
              + + V  +++
Sbjct: 452 QAQLYLAVAQKLQ 464


>gi|312876696|ref|ZP_07736676.1| carboxyl-terminal protease [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796536|gb|EFR12885.1| carboxyl-terminal protease [Caldicellulosiruptor lactoaceticus 6A]
          Length = 472

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +    G+  + V   ++RL   G L      +   D    +AVK FQ  + L PSG++D
Sbjct: 381 TKKFKKGDMDLEVLAAQQRLFYLGYLS---SWTAKMDDSTVAAVKKFQKDNRLYPSGVLD 437

Query: 159 SSTLEAMN 166
            +T + +N
Sbjct: 438 ITTQKKLN 445


>gi|307826384|ref|ZP_07656586.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
 gi|307732561|gb|EFO03436.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
          Length = 354

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 86/282 (30%), Gaps = 79/282 (28%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI--KKLLEQKMG 192
           D  +    + F          ++  + +  +N  VD  + + +  ++R+  +++L     
Sbjct: 51  DETLLDVARRF----------LLGQTEIVRLNPDVDRWLVK-KDEIVRLSNRRILPDSPH 99

Query: 193 LRYVLVNIPAASLEAV---ENGK---VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              + +NI    +      + G+     +     VGR D +TP+  +++ R + NP W  
Sbjct: 100 -NGITLNISEYRMYYYPPTKKGQAPQQVMSYAHGVGRQDWKTPLGKTKVARKIMNPEWHP 158

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI ++                                   ++            G  N
Sbjct: 159 PESIRRE-----------------------------------HAANGDPLPVVVPAGPHN 183

Query: 307 AMAS--TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            + +    ++         H T    + N +    T GCVR+                  
Sbjct: 184 PLGTRALYLDLPGEYRI--HGTDIDKI-NGIGMQITHGCVRMY--------------PKD 226

Query: 365 RYHIEEVVKTRKTTPVKLATEVPV----HFVYISAWSPKDSI 402
              I ++V       + +   + V    + +Y+ A    +  
Sbjct: 227 VEEIYDLVSVGTPVYI-VKQPIKVGWLDNVLYVEAHPDLEGE 267


>gi|323165397|gb|EFZ51184.1| peptidoglycan-binding domain 1 domain protein [Shigella sonnei 53G]
          Length = 282

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 49/139 (35%), Gaps = 33/139 (23%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQLALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +  A  E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAAMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QRLRERLIISGDLDPSKGL 130
             LRE L  +G LD  + L
Sbjct: 253 PALREILQRTGMLDGGRKL 271


>gi|300853500|ref|YP_003778484.1| spore cortex-lytic enzyme [Clostridium ljungdahlii DSM 13528]
 gi|300433615|gb|ADK13382.1| spore cortex-lytic enzyme precursor [Clostridium ljungdahlii DSM
           13528]
          Length = 229

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +     + G+    V +++++L   G  + S  +   +     +AVK FQ ++GL   G
Sbjct: 35  AVKAVAYYYGSRGNMVIQIQQKLRSWGYYNGS--VDGVYGYQTYTAVKYFQSKNGLKSDG 92

Query: 156 MVDSSTLEAM 165
           +V  +TL A+
Sbjct: 93  IVGDATLAAL 102


>gi|300785514|ref|YP_003765805.1| muramoyl-pentapeptide carboxypeptidase [Amycolatopsis mediterranei
           U32]
 gi|299795028|gb|ADJ45403.1| putative muramoyl-pentapeptide carboxypeptidase [Amycolatopsis
           mediterranei U32]
          Length = 242

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 11/83 (13%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-----FDAYVESAVK 143
                W     R L  G++   V  L+ R  ++G        S       F +   +AV+
Sbjct: 28  AQAYPW----SRTLKEGSTGADVTELQIR--VAGWAADHAAQSRVSIDGEFGSGTAAAVR 81

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            FQ  +GL     V  +T  A+N
Sbjct: 82  RFQAAYGLGADAQVGPATQAALN 104


>gi|254481176|ref|ZP_05094421.1| Putative peptidoglycan binding domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038339|gb|EEB79001.1| Putative peptidoglycan binding domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 560

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+   R L  G+SS +V  + + L    D       +  F+  ++  V LFQ   GL+  
Sbjct: 467 PKGFERLLAEGDSSPAVGEVAQ-LFARLDGQAQALTANRFNEALKQRVMLFQGAQGLEAD 525

Query: 155 GMVDSSTLEAMN 166
           G++   TL  +N
Sbjct: 526 GVIGVQTLLKLN 537


>gi|226944381|ref|YP_002799454.1| general secretion pathway protein A [Azotobacter vinelandii DJ]
 gi|226719308|gb|ACO78479.1| General secretion pathway protein A [Azotobacter vinelandii DJ]
          Length = 570

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 7/113 (6%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQ 112
           D   AR+ +  +     ++  T+    +    Y  +      P +  R L  G+    V 
Sbjct: 452 DERHARLAVSGEIRTVGLAALTL----RWSGRYVRLQQA---PLIHGRHLSHGSRGADVA 504

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +  +L         +     F   +E  V+ FQ  +GL   G+V + TLE +
Sbjct: 505 WVDLQLERWEGRSRPRAGDPLFGDDLERRVRRFQQANGLRADGVVGAQTLERL 557


>gi|167036506|ref|YP_001664084.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167038593|ref|YP_001666171.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320114935|ref|YP_004185094.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|320116981|ref|YP_004187140.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166855340|gb|ABY93748.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|166857427|gb|ABY95835.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928026|gb|ADV78711.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|319930072|gb|ADV80757.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 1089

 Score = 57.5 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG++   V+ L+E L I G    S      F +  E+AV+ FQ ++GL   G+V   T
Sbjct: 319 LKLGSTGNGVKILQETLNIIGY---SLVEDGQFGSGTEAAVRDFQSKNGLTVDGIVGPQT 375

Query: 162 LEAM 165
            + +
Sbjct: 376 WQKL 379


>gi|330829008|ref|YP_004391960.1| LysM domain-containing protein [Aeromonas veronii B565]
 gi|328804144|gb|AEB49343.1| LysM domain protein [Aeromonas veronii B565]
          Length = 318

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 73/210 (34%), Gaps = 50/210 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +    +++N+P   L     GK   +   + +G + R+TP + + +     NP W
Sbjct: 96  MLLPDVPREGIVINLPELRLYYFPKGKSEVIVLPIGIGDIGRETPEMTTTVIEKNPNPTW 155

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P          ++R+   +L+   I +                            PG 
Sbjct: 156 -VP--------GPMVRK--SWLEQKGITL-----------------------PAVVPPGP 181

Query: 305 INAMASTKIEFYSRNNT--Y-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
            N +   K           Y +H T +   F   +R  ++GC+R+    D+   L K  P
Sbjct: 182 ENPLG--KFAMRLGYGKRDYLIHGTNKE--FGVGLR-VSAGCIRL-RPDDI-EALFKIVP 234

Query: 362 TWSRYH-----IEEVVKTRKTTPVKLATEV 386
             +        ++  ++      +++ + +
Sbjct: 235 IGTPVRVINQPVKVAIEPDGRRWLEVHSPL 264


>gi|310641615|ref|YP_003946373.1| sporulation specific n-acetylmuramoyl-l-alanineamidase, spore
           cortex-lytic enzyme [Paenibacillus polymyxa SC2]
 gi|309246565|gb|ADO56132.1| Sporulation specific N-acetylmuramoyl-L-alanineamidase, spore
           cortex-lytic enzyme [Paenibacillus polymyxa SC2]
          Length = 283

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 4/113 (3%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDI-LSRGGWPELPIRPLHLGNSSVSVQRLRER 117
           +     +   +   ++  +  ++++  Q +  ++   P      +  G+    V  L+ R
Sbjct: 13  LAASAITYTGLFKNDSAQERAESLSTQQKVTAAQPVQPTFSSEAVDFGSYGQDVYELQSR 72

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST-LEAMNVPV 169
           L + G       +   F +    AVK FQ   G+ P G+V + T L+ +N   
Sbjct: 73  LKLLGFF--GGKVDSHFGSSTLKAVKGFQKEFGIRPDGVVGAKTKLKLVNATP 123


>gi|307323213|ref|ZP_07602423.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306890702|gb|EFN21678.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 244

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVDS 159
           L LG++   V  L++RL+   ++     ++  +D  +  AV  FQ+ +G+     G+  S
Sbjct: 175 LTLGDTGPEVTELQKRLLRIPNVYQDGPVNGQYDQSLAQAVSRFQVWYGIRGDANGVYGS 234

Query: 160 STLEAM 165
           +T + +
Sbjct: 235 ATRQQL 240


>gi|159897497|ref|YP_001543744.1| stage II sporulation D domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159890536|gb|ABX03616.1| Stage II sporulation D domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 462

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 9/90 (10%)

Query: 95  PELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P LP  P L  G+S   V+  +  L   G    S     AF A  E AV+ FQ  +GL  
Sbjct: 332 PSLPAWPSLRNGSSGNDVKAAQYLLRSHGY---SLTADGAFGAGTEQAVRSFQSANGLTA 388

Query: 154 SGMVDSSTLEAM-----NVPVDLRIRQLQV 178
            G++   T   +     N      +R +Q 
Sbjct: 389 DGIIGPQTYAKLIKTVQNGSSGDAVRAIQT 418



 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 8/66 (12%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           I+ +  G+S  +V+ ++  L ++        +  AF A  E AV   Q  + L   G+V 
Sbjct: 401 IKTVQNGSSGDAVRAIQTLLGVT--------VDGAFGAGTEQAVLNLQATYDLTRDGIVG 452

Query: 159 SSTLEA 164
             T +A
Sbjct: 453 PVTWQA 458


>gi|119485108|ref|ZP_01619493.1| hypothetical protein L8106_06659 [Lyngbya sp. PCC 8106]
 gi|119457336|gb|EAW38461.1| hypothetical protein L8106_06659 [Lyngbya sp. PCC 8106]
          Length = 204

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 54/173 (31%), Gaps = 52/173 (30%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           + L        +++ +    +    N +      V VG+   +TP    ++ +++ NP W
Sbjct: 69  RFLPLGKPKMQLVLRLAQRRVFVYRNDQQVASYPVAVGKPGWETPTGQFQVIQMVENPTW 128

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                           Q+P                EV                    PG 
Sbjct: 129 ----------------QNP-------------WTGEVS------------------SPGP 141

Query: 305 INAMAS--TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            +A+           ++    H TP     N++ R  + GCVR+RN   + ++
Sbjct: 142 NSALGLRWIGFWTDGKDTIGFHGTPTV---NSIGRAASHGCVRMRNEDVVALF 191


>gi|110632447|ref|YP_672655.1| peptidoglycan binding domain-containing protein [Mesorhizobium sp.
           BNC1]
 gi|110283431|gb|ABG61490.1| Peptidoglycan-binding domain 1 [Chelativorans sp. BNC1]
          Length = 143

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 6/74 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G++   V+ L+  L+ +G      G    +    +SAV  FQ   GL   G+    T
Sbjct: 2   LRMGSTGARVRELQALLVRAGHALKVDGD---YGPSTKSAVLAFQRFAGLIADGVAGPET 58

Query: 162 LEAMN---VPVDLR 172
           + A+    V  D R
Sbjct: 59  MRALASFKVAPDER 72


>gi|121534304|ref|ZP_01666128.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
 gi|121307074|gb|EAX47992.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
          Length = 408

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 61/237 (25%), Gaps = 76/237 (32%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           +  +    +++N+P+ +LE      +     V +G+    TP  +  I     NP+W  P
Sbjct: 26  DPDIASPNIVINLPSRTLEFYSGSTLVKVYPVAIGKPSTPTPTGNFSIISKEVNPWWFPP 85

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
           R                             G  V                    PG  N 
Sbjct: 86  R----------------------------GGAAV-------------------PPGPDNP 98

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +    + F        H T  P          ++GCVR+                     
Sbjct: 99  LGYRWMGFLPMYGI--HGTNTPWAIGT---AVSNGCVRMHEA--------------DVEE 139

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI--IQFRDDIYGLDNVHVGIIPL 422
           + EVV       V     V V                +    DIYG  +V +  I  
Sbjct: 140 LYEVVPYGTPVKVTYD-RVKVR-------VDAHGNASVGIYPDIYGYSDVTLSEIKR 188


>gi|206577142|ref|YP_002237024.1| peptidoglycan binding domain/papain family cysteine protease
           [Klebsiella pneumoniae 342]
 gi|206566200|gb|ACI07976.1| peptidoglycan binding domain/papain family cysteine protease
           [Klebsiella pneumoniae 342]
          Length = 962

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPS----KGLSVAFDAYVESAVKLFQMRHGLDPS 154
           ++ L  G+S   V  LR+RL  +   D         S  FDA + SAV+ +Q   G+   
Sbjct: 2   VKLLLQGSSGPEVVELRKRLAKTLGADAKMFALPSNSDTFDATLASAVRHWQSNIGIIAD 61

Query: 155 GMVDS 159
           G+V  
Sbjct: 62  GVVGP 66


>gi|291541737|emb|CBL14847.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
           [Ruminococcus bromii L2-63]
          Length = 420

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 34/74 (45%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L L + + +V+ ++ RL   G +     ++  +      AVK FQ  +GL  +G  D++
Sbjct: 347 SLKLEDENDTVKAMQLRLYNIGYIADKDNVTGYYGEVTAEAVKKFQKNNGLKETGTADNA 406

Query: 161 TLEAMNVPVDLRIR 174
           TL  +      + +
Sbjct: 407 TLVLLFDSSAKKAK 420


>gi|253681528|ref|ZP_04862325.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum D str. 1873]
 gi|253561240|gb|EES90692.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum D str. 1873]
          Length = 307

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL LG++   V+ L+++L   G       L   F    E A+  FQ R+ L   G+V  S
Sbjct: 83  PLKLGSNGNEVKALQQKLNKFGY---KINLDGIFGHSTEIAIYDFQKRNDLARDGIVGKS 139

Query: 161 TLEAMNVPVDLR 172
           TL+ +++    +
Sbjct: 140 TLKKLDLEPTEK 151


>gi|282860963|ref|ZP_06270029.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
 gi|282564699|gb|EFB70235.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
          Length = 311

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 4/129 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+SS  V+ L+ RL   G  D S   +  +    E++V+ FQ + GL  +G  D+ T
Sbjct: 106 MKTGDSSDRVRELQARLRQIGHFDRSP--TGYYGTTTEASVRSFQGKRGLPRTGRTDTVT 163

Query: 162 L-EAMNVPVDLRIRQLQVNLMRIKKLL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
               +++  +    +L+    R       + M  R + ++  + +L  + +GKV     V
Sbjct: 164 WQRLLDMTREPTADELRPPTERAVAKPDPRCMTGRVLCISKNSRTLAWMIDGKVVSSMDV 223

Query: 220 IVGRVDRQT 228
             G     T
Sbjct: 224 RFGSEYTPT 232


>gi|301066442|ref|YP_003788465.1| periplasmic protease [Lactobacillus casei str. Zhang]
 gi|300438849|gb|ADK18615.1| Periplasmic protease [Lactobacillus casei str. Zhang]
          Length = 461

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 371 INATQLKPGDKDSDVKSLQQMLTALK--VGSVTVNSQYDDATQAAVKTFQQANKLDATGT 428

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL  +   +  ++ +
Sbjct: 429 ADQDTLATLAQKLSAQLTK 447


>gi|284042364|ref|YP_003392704.1| peptidase M23 [Conexibacter woesei DSM 14684]
 gi|283946585|gb|ADB49329.1| Peptidase M23 [Conexibacter woesei DSM 14684]
          Length = 352

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           A  + +  RG  P L  RPL  G +   V  L+  L   G      G   +F    + AV
Sbjct: 88  ATRRALGRRGR-PSLGSRPLRTGLTGWDVAALQFLLHGRGF--GPGGFDGSFGPNTDDAV 144

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
           + FQ    L   G+   +TL A+
Sbjct: 145 RRFQSAASLGVDGVAGPATLAAL 167



 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 13/30 (43%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               +AV+  Q R  L   G+   +T  A+
Sbjct: 64  PRTLAAVRRIQARRNLAVDGIAGPATRRAL 93


>gi|291298964|ref|YP_003510242.1| zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
           44728]
 gi|290568184|gb|ADD41149.1| Zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
           44728]
          Length = 242

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 27/64 (42%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G     V++L+ R+           L   F A  ESAVK FQ  +GL   G+  S
Sbjct: 38  RKLKKGMKGNDVKQLQIRVAGYPGYGNILSLDGEFGARTESAVKRFQKAYGLAADGVAGS 97

Query: 160 STLE 163
            T  
Sbjct: 98  RTFR 101


>gi|222530301|ref|YP_002574183.1| carboxyl-terminal protease [Caldicellulosiruptor bescii DSM 6725]
 gi|222457148|gb|ACM61410.1| carboxyl-terminal protease [Caldicellulosiruptor bescii DSM 6725]
          Length = 472

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +    G+  + V   ++RL   G L      +   D    +AVK FQ  + L PSG++D
Sbjct: 381 TKKFKKGDMDLEVLAAQQRLFYLGYLS---NWTAKMDDSTVAAVKKFQKDNKLYPSGVLD 437

Query: 159 SSTLEAMN 166
            +T + +N
Sbjct: 438 ITTQKKLN 445


>gi|119488069|ref|ZP_01621513.1| Peptidoglycan-binding domain 1 [Lyngbya sp. PCC 8106]
 gi|119455358|gb|EAW36497.1| Peptidoglycan-binding domain 1 [Lyngbya sp. PCC 8106]
          Length = 206

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG    +V  L+ERL   G L         F +  ++AV   Q ++ L P G+V S T
Sbjct: 143 LKLGMRGEAVVGLQERLRAKGFLKGQADG--VFGSQTQAAVIAAQEQYKLKPDGVVGSQT 200

Query: 162 LEAM 165
              M
Sbjct: 201 --WM 202



 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L+  L + G       +   +      AV  FQ    L  +G+ +S+
Sbjct: 41  TLQTGSQGTEVFELQAALKLLGYYTGE--VDGVYAESTAEAVSQFQKAANLPVTGVTNSA 98

Query: 161 TLEAMNVPVDL 171
           T + +  P + 
Sbjct: 99  TWDRL-FPPEE 108


>gi|330815101|ref|YP_004358806.1| Gp43, bacteriophage-acquired protein [Burkholderia gladioli BSR3]
 gi|327367494|gb|AEA58850.1| Gp43, bacteriophage-acquired protein [Burkholderia gladioli BSR3]
          Length = 270

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH  +    V  L++RL+ +G       ++  +D   E AVK  Q   GL   G+    T
Sbjct: 4   LHFNDCGAEVGLLQQRLVRAGY---PLAVTHIYDEATERAVKAVQAAAGLVVDGIAGPKT 60

Query: 162 LEAM 165
             A+
Sbjct: 61  YNAL 64


>gi|288556870|ref|YP_003428805.1| peptidoglycan binding domain-containing YocH-like protein [Bacillus
           pseudofirmus OF4]
 gi|288548030|gb|ADC51913.1| peptidoglycan binding domain-containing putative YocH-like protein
           [Bacillus pseudofirmus OF4]
          Length = 356

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 8/166 (4%)

Query: 6   KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS 65
           + N  L   F   +   G+ L   P  +   D   N  +  +  +        +      
Sbjct: 4   QTNSKLLRNFGLPLATAGVLLFASPAISEASDLGSNLLHKGVDGESVQVVQELLHEKGLL 63

Query: 66  DIPIISKETIAQTEKAIAFYQD---ILSRG--GWPEL-PIRPLHLGNSSVSVQRLRERLI 119
           D   I+     +T  A++ YQ+   ++  G  G   +  ++ L  G+  V V+ L+ +L+
Sbjct: 64  DEAAITGTFSKETFDAVSTYQEKHNLVVDGIAGPQTVGAMKVLEKGDEGVLVEDLQHQLV 123

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             G  + +K     +    ++AVK FQ   G+   G+    T   +
Sbjct: 124 DLGFYEGNKDG--LYGPLTQAAVKGFQKAQGISVDGIAGPETYSNL 167



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH G    SVQ ++E L   G LD +  ++  F      AV  +Q +H L   G+    T
Sbjct: 41  LHKGVDGESVQVVQELLHEKGLLDEAA-ITGTFSKETFDAVSTYQEKHNLVVDGIAGPQT 99

Query: 162 LEAMNV 167
           + AM V
Sbjct: 100 VGAMKV 105


>gi|325291306|ref|YP_004267487.1| Peptidoglycan-binding domain 1 protein [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324966707|gb|ADY57486.1| Peptidoglycan-binding domain 1 protein [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 258

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 95  PELPIRP--------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           P  P RP        L  G+   SV+ L+  L   G       +   F     +AV  FQ
Sbjct: 102 PSAPARPARTQSCPTLREGSRGASVRELQTLLSNHGF--NPGPIDGIFGPRTRAAVVSFQ 159

Query: 147 MRHGLDPSGMVDSSTLEAMNV 167
              GL P G+V   T  A+ V
Sbjct: 160 TSKGLSPDGIVGPRTWAALGV 180



 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L  G+   SV+ L+ RL   G       +   F +  ++AV  FQ    L P 
Sbjct: 186 PSTKCPTLRRGSRGSSVRTLQTRLNNQGF--NPGPIDGIFGSRTQAAVIAFQNSRCLSPD 243

Query: 155 GMVDSSTLEAM 165
           G+V   T  A+
Sbjct: 244 GIVGRKTWAAL 254



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L +G++  +V  L+E L++ G       +   F    ++AV  FQ    L P 
Sbjct: 4   PPTNYPTLQIGSTGPAVVHLQESLVVQGF--DPGMIDGIFGPKTQAAVIAFQSCCCLVPD 61

Query: 155 GMVDSSTLEAM 165
           G+V   T  A+
Sbjct: 62  GIVGPITWAAL 72


>gi|289665229|ref|ZP_06486810.1| carboxypeptidase [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 446

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 14/123 (11%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKE---TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGN 106
           D++  +   V   +    P  + E   +  Q + A + +  +LSR          L  G 
Sbjct: 175 DQYAVYANSVSNSLPDRKPTEAAEKGTSNQQIKGASSNHHAVLSRHD------GKLEQGE 228

Query: 107 SSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            S  V++L+ +L   G    D  P       F    + AV+ FQ  H L   G+V   T 
Sbjct: 229 RSEQVKQLQGQLAQLGATGRDGKPLHADGD-FGTNTKYAVEQFQRAHALQVDGVVGQQTQ 287

Query: 163 EAM 165
            A+
Sbjct: 288 AAL 290


>gi|262170608|ref|ZP_06038286.1| general secretion pathway protein A [Vibrio mimicus MB-451]
 gi|261891684|gb|EEY37670.1| general secretion pathway protein A [Vibrio mimicus MB-451]
          Length = 529

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 12/111 (10%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIA-----FYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
            +  D    ++  +      + +       Y  +L +GG+     R L  G     V  L
Sbjct: 411 RLNADEAELLVGDQRYRIARQWLEPLWRGQY-SLLWQGGF----SRTLKQGMQGDDVALL 465

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +L     L   +     FD  +   V+LFQ    +   G+    TL  +
Sbjct: 466 ESKLSQV--LGEPERPRDQFDKDLSRKVELFQRWQNMQVDGIAGRQTLRRL 514


>gi|160932600|ref|ZP_02079990.1| hypothetical protein CLOLEP_01439 [Clostridium leptum DSM 753]
 gi|156868559|gb|EDO61931.1| hypothetical protein CLOLEP_01439 [Clostridium leptum DSM 753]
          Length = 241

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+    V++++ +L   G    S  +   + +  ++AV  FQ + GLDP G+  + TL
Sbjct: 52  KYGSQGEEVRQIQTKLKELGLYTGS--IDGIYGSGTKNAVIQFQKQQGLDPDGIAGTKTL 109

Query: 163 EAM 165
            A+
Sbjct: 110 TAL 112


>gi|119487720|ref|ZP_01621229.1| endopeptidase, cell wall lytic activity [Lyngbya sp. PCC 8106]
 gi|119455553|gb|EAW36690.1| endopeptidase, cell wall lytic activity [Lyngbya sp. PCC 8106]
          Length = 227

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L+ G+    V+ ++ +L   G    +   +  +    + AVK FQ  +GL   G+V  S
Sbjct: 63  SLYYGDYGSDVKDVQHKLAYYGYFSYNA--TGYYGKVTKHAVKAFQRDYGLHVDGVVGPS 120

Query: 161 TLEAM 165
           T  AM
Sbjct: 121 TASAM 125



 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V +L+++L   G        +  +    + AVK FQ  +GL   G+    TL AM
Sbjct: 172 VTKLQDQLANYGYFH--ANSTGYYGKITKHAVKAFQYDYGLHADGIAGPKTLRAM 224


>gi|220931154|ref|YP_002508062.1| Spore cortex-lytic enzyme SleB [Halothermothrix orenii H 168]
 gi|219992464|gb|ACL69067.1| Spore cortex-lytic enzyme SleB [Halothermothrix orenii H 168]
          Length = 239

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L+ G S  +V+ ++ +L   G  +    +   F      AV+ FQ ++GL   G+V   
Sbjct: 42  TLYWGTSGSNVRLVQWKLQQWGYYEG--RIDGYFGPETSEAVREFQRKNGLRVDGLVGPQ 99

Query: 161 TLEAMNVP--VDLRIRQLQVNLMR 182
           T  A+          RQ    + R
Sbjct: 100 TWAALGYEARPTTYARQTAAAVSR 123


>gi|258626901|ref|ZP_05721705.1| General secretion pathway protein A [Vibrio mimicus VM603]
 gi|258580824|gb|EEW05769.1| General secretion pathway protein A [Vibrio mimicus VM603]
          Length = 529

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 12/111 (10%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIA-----FYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
            +  D    ++  +      + +       Y  +L +GG+     R L  G     V  L
Sbjct: 411 RLNADEAELLVGDQRYRIARQWLEPLWRGQY-SLLWQGGF----SRTLKQGMQGDDVALL 465

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +L     L   +     FD  +   V+LFQ    +   G+    TL  +
Sbjct: 466 ESKLSQV--LGEPERPRDQFDKDLSRKVELFQRWQNMQVDGIAGRQTLRRL 514


>gi|269955412|ref|YP_003325201.1| ErfK/YbiS/YcfS/YnhG family protein [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304093|gb|ACZ29643.1| ErfK/YbiS/YcfS/YnhG family protein [Xylanimonas cellulosilytica DSM
           15894]
          Length = 326

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 18/120 (15%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P  P   G++   V  L++RL+  G           +    + AV  FQ   GL   
Sbjct: 124 PPAPQYPQR-GSTGPEVLALQQRLMDLGYFILKADGD--YGWATQQAVWAFQKAAGLYRD 180

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+V   T  A++                  +   +    + V +++    L AVE+G+V 
Sbjct: 181 GVVGPQTQAALDAGY---------------RPTPRSSSGKVVEIDLDKQILLAVEDGRVV 225


>gi|119773972|ref|YP_926712.1| peptidoglycan binding domain-containing protein [Shewanella
           amazonensis SB2B]
 gi|119766472|gb|ABL99042.1| peptidoglycan-binding domain 1 [Shewanella amazonensis SB2B]
          Length = 613

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 94  WPELPIRPLHLGNSSVS--VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W      P  +G +S    VQ L   L     + P   L   FD  +E+ +KLFQ +HGL
Sbjct: 525 WQAPVYSPREIGIASPQPEVQWLENGLAKVDKITP--RLVNEFDTELENRLKLFQRQHGL 582

Query: 152 DPSGMVDSSTLEAMN 166
              G+  S TL+ +N
Sbjct: 583 KADGIAGSQTLQQLN 597


>gi|308049519|ref|YP_003913085.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
 gi|307631709|gb|ADN76011.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
          Length = 308

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 64/164 (39%), Gaps = 39/164 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +  R V++N+    L   +N +       + +GRV R+TP++ ++I++ + +P W
Sbjct: 93  MLLPDVERRGVVINLAELRLYYFDNARGRVYVYPIGIGRVGRETPLVKTKISQRIKDPTW 152

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P +  +K+          +L++  I +                             G 
Sbjct: 153 T-PTANTRKE----------WLEERGIEL-----------------------PRVVPAGP 178

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
            N M    +     N  Y +H T     F   +R  ++GC+R+R
Sbjct: 179 DNPMGHRALRLSYGNGEYLIHGTNHE--FGIGMR-VSAGCIRMR 219


>gi|59712850|ref|YP_205626.1| general secretion pathway protein A [Vibrio fischeri ES114]
 gi|59480951|gb|AAW86738.1| general secretion pathway protein A [Vibrio fischeri ES114]
          Length = 518

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +  R +  G+   ++  L   L+ +  L+     S  FD   E  VK FQ   GL   
Sbjct: 435 PIITERAMRKGDEGEAIFAL-NHLLST-ALEQPMIESDFFDEKTEQQVKQFQEIFGLKED 492

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQ 177
           G+  SSTL  ++   +     LQ
Sbjct: 493 GIAGSSTLMWLDSVTNANAPLLQ 515


>gi|66768719|ref|YP_243481.1| hypothetical protein XC_2411 [Xanthomonas campestris pv. campestris
            str. 8004]
 gi|66574051|gb|AAY49461.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris
            str. 8004]
          Length = 1264

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 102  LHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L LG+    V+ L+ RL       P   +      +    E AV+ FQ   GL  +G+  
Sbjct: 948  LRLGDRGQEVEFLQYRLQQIDARGPNGQAVPQDGHYGPETEHAVRQFQQDQGLPATGVAG 1007

Query: 159  SSTLEAMNVPVDLRIRQLQ 177
                 A++     R   L+
Sbjct: 1008 PDLDAALSQTQHARREALK 1026


>gi|186682191|ref|YP_001865387.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186464643|gb|ACC80444.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 135

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G++  +V+  +  L   G    +  ++  FD    SAV  FQ   GL   G++   T
Sbjct: 73  LTVGSTGEAVKTAQNALKQQGFY--TANVNGVFDNKTRSAVIKFQKSKGLRADGIIGRRT 130

Query: 162 LEAM 165
           L ++
Sbjct: 131 LASL 134


>gi|120553059|ref|YP_957410.1| ErfK/YbiS/YcfS/YnhG family protein [Marinobacter aquaeolei VT8]
 gi|120322908|gb|ABM17223.1| ErfK/YbiS/YcfS/YnhG family protein [Marinobacter aquaeolei VT8]
          Length = 349

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 60/209 (28%), Gaps = 51/209 (24%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +  +   +    +++N+    L             V VG  +  +P+ ++++   + +P 
Sbjct: 104 RMYVLPDVEREGIVINLAEYRLYYFTPDGGVQVYPVGVGTEENPSPLTNAKVTMPLESPA 163

Query: 244 WVIPRSI-----IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
           W  P SI        D +  +                                       
Sbjct: 164 WYPPASIRAEYEASGDYLPKMI-------------------------------------- 185

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
              PG  N + +  +   S     +H T +   F   +   + GC R+   +I      +
Sbjct: 186 --PPGPGNPLGTHALML-SEKGYLIHGTNKQ--FGVGM-PVSHGCFRMYNEDISRFVYQV 239

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
            K TP        ++  +     +++   
Sbjct: 240 EKGTPVQVIREPVKIGMSGGEVWLEVHRP 268


>gi|168177537|ref|ZP_02612201.1| spore-cortex-lytic enzyme [Clostridium botulinum NCTC 2916]
 gi|226947425|ref|YP_002802516.1| spore-cortex-lytic enzyme [Clostridium botulinum A2 str. Kyoto]
 gi|182671104|gb|EDT83078.1| spore-cortex-lytic enzyme [Clostridium botulinum NCTC 2916]
 gi|226841988|gb|ACO84654.1| spore-cortex-lytic enzyme [Clostridium botulinum A2 str. Kyoto]
          Length = 231

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLH---------LGNSSVSVQRLRERLIISGDLDPS 127
             ++AI +   I+   G   L I P            G+    + +++ +L   G  +  
Sbjct: 6   YLKRAIIYVLAIMLAYGSTTLYILPYTNATKAVAYYYGHRGDIISQVQRKLKAWGYYNG- 64

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            G+   F     +AV+ FQ ++GL   G++   TL A+ +
Sbjct: 65  -GVDGIFGHQTYTAVRYFQSKNGLTVDGIIGDKTLAALGI 103


>gi|160931660|ref|ZP_02079054.1| hypothetical protein CLOLEP_00491 [Clostridium leptum DSM 753]
 gi|156869305|gb|EDO62677.1| hypothetical protein CLOLEP_00491 [Clostridium leptum DSM 753]
          Length = 574

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%)

Query: 98  PIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P  P  L LG+S   V +L++RL   G  +   G +  F  Y    +K FQ + G + +G
Sbjct: 201 PAEPVYLQLGSSGAEVAKLQQRLAELGYFN--DGATEYFGEYTAECLKAFQAKAGYEATG 258

Query: 156 MVDSSTLEAM 165
           ++D  T   +
Sbjct: 259 ILDPDTEALL 268



 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           +  G++   V  L+ RLI+   +      S  FD   E+AVK +Q  + L+ +G+VD +
Sbjct: 356 IKKGDAGEEVTELQNRLILLRYMIGDA--SGTFDDATEAAVKEYQTTNSLEATGIVDKA 412



 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG     V+ L+ +L          G S  FD   E AVK F+  +GL  +G+ D + 
Sbjct: 431 LKLGYVGDDVKALQMKLAKLDLY--QGGASGTFDKATEQAVKSFEEENGLRVTGVADLTV 488

Query: 162 LEAM 165
             A+
Sbjct: 489 RIAI 492



 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G  +  +  ++++LI    +      +  +    ++AV  FQ   GL+ +G+ D++T   
Sbjct: 284 GEFAEEIHTIQQKLIQLQYMTGE--TTGFYGDQTKAAVAKFQTVVGLESTGVYDNTTRSK 341

Query: 165 M 165
           +
Sbjct: 342 L 342


>gi|229521273|ref|ZP_04410693.1| general secretion pathway protein A [Vibrio cholerae TM 11079-80]
 gi|229341805|gb|EEO06807.1| general secretion pathway protein A [Vibrio cholerae TM 11079-80]
          Length = 529

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 445 WQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 502

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 503 DGIAGRQTLRRL 514


>gi|88859637|ref|ZP_01134277.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Pseudoalteromonas
           tunicata D2]
 gi|88818654|gb|EAR28469.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Pseudoalteromonas
           tunicata D2]
          Length = 306

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 54/153 (35%), Gaps = 41/153 (26%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+P   L   E          + +G+   +TP+  S I++   +P W++P       
Sbjct: 97  IVVNLPELRLYYFEPEKSQVHVYPIGIGQKGHRTPVTRSFISQKRKSPDWIVPE------ 150

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
              L ++   YL + NI         V    V                G  N + S  + 
Sbjct: 151 --PLRKR---YLTEKNI---------VLPPIV--------------PAGPDNPLGSYAMR 182

Query: 315 F-YSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              S      H T +   F  +    +SGC+R+
Sbjct: 183 LGKSEYLI--HGTNQR--FG-IGLSVSSGCIRM 210


>gi|121730096|ref|ZP_01682499.1| general secretion pathway protein A [Vibrio cholerae V52]
 gi|147674552|ref|YP_001217947.1| general secretion pathway protein A [Vibrio cholerae O395]
 gi|262167277|ref|ZP_06034987.1| general secretion pathway protein A [Vibrio cholerae RC27]
 gi|121628153|gb|EAX60683.1| general secretion pathway protein A [Vibrio cholerae V52]
 gi|146316435|gb|ABQ20974.1| general secretion pathway protein A [Vibrio cholerae O395]
 gi|227014337|gb|ACP10547.1| general secretion pathway protein A [Vibrio cholerae O395]
 gi|262024252|gb|EEY42943.1| general secretion pathway protein A [Vibrio cholerae RC27]
          Length = 529

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 445 WQASFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 502

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 503 DGIAGRQTLRRL 514


>gi|229524431|ref|ZP_04413836.1| general secretion pathway protein A [Vibrio cholerae bv. albensis
           VL426]
 gi|229338012|gb|EEO03029.1| general secretion pathway protein A [Vibrio cholerae bv. albensis
           VL426]
          Length = 529

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 445 WQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 502

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 503 DGIAGRQTLRRL 514


>gi|168182186|ref|ZP_02616850.1| spore-cortex-lytic enzyme [Clostridium botulinum Bf]
 gi|237793523|ref|YP_002861075.1| spore-cortex-lytic enzyme [Clostridium botulinum Ba4 str. 657]
 gi|182674550|gb|EDT86511.1| spore-cortex-lytic enzyme [Clostridium botulinum Bf]
 gi|229262004|gb|ACQ53037.1| spore-cortex-lytic enzyme [Clostridium botulinum Ba4 str. 657]
          Length = 231

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLH---------LGNSSVSVQRLRERLIISGDLDPS 127
             ++AI +   I+   G   L I P            G+    + +++ +L   G  +  
Sbjct: 6   YLKRAIIYVLAIMLAYGSTTLYILPYTNATKAVAYYYGHRGDIISQVQRKLKAWGYYNG- 64

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            G+   F     +AV+ FQ ++GL   G++   TL A+ +
Sbjct: 65  -GVDGIFGHQTYTAVRYFQSKNGLTVDGIIGDKTLAALGI 103


>gi|153831064|ref|ZP_01983731.1| general secretion pathway protein A [Vibrio cholerae 623-39]
 gi|148873460|gb|EDL71595.1| general secretion pathway protein A [Vibrio cholerae 623-39]
          Length = 529

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 445 WQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 502

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 503 DGIAGRQTLRRL 514


>gi|153214514|ref|ZP_01949423.1| general secretion pathway protein A [Vibrio cholerae 1587]
 gi|124115316|gb|EAY34136.1| general secretion pathway protein A [Vibrio cholerae 1587]
          Length = 529

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 2/84 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 445 WQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 502

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ 177
            G+    TL  + +    +   L+
Sbjct: 503 DGIAGRQTLRRLELLTQQKAPSLK 526


>gi|119510785|ref|ZP_01629911.1| hypothetical protein N9414_03905 [Nodularia spumigena CCY9414]
 gi|119464548|gb|EAW45459.1| hypothetical protein N9414_03905 [Nodularia spumigena CCY9414]
          Length = 84

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
               V+++++ L+ +G L  +  ++  +D   ESAV+ FQ   GL   G+V   T   + 
Sbjct: 24  QGEDVRKVQQALVNAGFLS-ANQINGIYDNDTESAVEKFQEEKGLSQDGVVGPQTRRLLG 82

Query: 167 VP 168
           + 
Sbjct: 83  IS 84


>gi|229514071|ref|ZP_04403533.1| general secretion pathway protein A [Vibrio cholerae TMA 21]
 gi|229349252|gb|EEO14209.1| general secretion pathway protein A [Vibrio cholerae TMA 21]
          Length = 529

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 445 WQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 502

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 503 DGIAGRQTLRRL 514


>gi|254291645|ref|ZP_04962433.1| general secretion pathway protein A [Vibrio cholerae AM-19226]
 gi|150422417|gb|EDN14376.1| general secretion pathway protein A [Vibrio cholerae AM-19226]
          Length = 529

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 445 WQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 502

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 503 DGIAGRQTLRRL 514


>gi|294499183|ref|YP_003562883.1| autolytic lysozyme [Bacillus megaterium QM B1551]
 gi|294349120|gb|ADE69449.1| autolytic lysozyme [Bacillus megaterium QM B1551]
          Length = 433

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 32/68 (47%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+S ++V+ L++ L   G      G    +     +AVK FQ ++GL  +G  
Sbjct: 220 PSAQLQQGDSGLAVKELQQNLTKLGFDLSQHGTDGQYGNETTAAVKAFQEKYGLTSTGKA 279

Query: 158 DSSTLEAM 165
           D  TL  M
Sbjct: 280 DERTLAKM 287


>gi|300113040|ref|YP_003759615.1| peptidoglycan-binding domain 1 protein [Nitrosococcus watsonii
           C-113]
 gi|299538977|gb|ADJ27294.1| Peptidoglycan-binding domain 1 protein [Nitrosococcus watsonii
           C-113]
          Length = 683

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   SV  L++RL   G    +      F +  ESAV+ FQ    +   G+V   T
Sbjct: 216 LGRGSRGASVIELQKRLSALGFNPGAADG--IFGSRTESAVRAFQHSQRITVDGIVGPQT 273

Query: 162 LEAM 165
              +
Sbjct: 274 WSRL 277



 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 10/49 (20%)

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL + G L P             SAV+ FQ RH L   G+V   T  A+
Sbjct: 499 RLAVDGILGPMTR----------SAVRSFQSRHRLAVDGIVGPHTERAL 537



 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L     +S   +     A++ FQ + GL   G+    T  A+
Sbjct: 128 LGSRLPVSGVMNRGTRDALRQFQKQQGLPVDGIAGPPTERAL 169


>gi|297581069|ref|ZP_06942994.1| general secretion pathway protein A [Vibrio cholerae RC385]
 gi|297534895|gb|EFH73731.1| general secretion pathway protein A [Vibrio cholerae RC385]
          Length = 529

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 445 WQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 502

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 503 DGIAGRQTLRRL 514


>gi|300855725|ref|YP_003780709.1| SpoIID-like domain-containing protein [Clostridium ljungdahlii DSM
           13528]
 gi|300435840|gb|ADK15607.1| SpoIID-like domain containing protein [Clostridium ljungdahlii DSM
           13528]
          Length = 852

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +   PL LG +S  V  L+  LI  G      G +  F    +SAV  FQ   G+  SG 
Sbjct: 771 ISTLPLSLGMTSSDVAALQNALIKLGY--NVSGATGYFGTQTKSAVIAFQTDAGIPASGT 828

Query: 157 VDSSTLEAMN 166
           V + T  A+N
Sbjct: 829 VGTWTYSALN 838


>gi|302532090|ref|ZP_07284432.1| predicted protein [Streptomyces sp. C]
 gi|302440985|gb|EFL12801.1| predicted protein [Streptomyces sp. C]
          Length = 91

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 105 GNSSVSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G++   V+ ++  LI   G     KG+   F A  ESAVK  Q  HGL   G+V + T +
Sbjct: 23  GDAGAKVKEIQALLIQHHGYAVGPKGVDGYFGAGTESAVKRLQRGHGLKADGIVSAKTWD 82

Query: 164 AMNVPVDLR 172
            +      R
Sbjct: 83  RLRGEPLDR 91


>gi|153803634|ref|ZP_01958220.1| general secretion pathway protein A [Vibrio cholerae MZO-3]
 gi|124120834|gb|EAY39577.1| general secretion pathway protein A [Vibrio cholerae MZO-3]
          Length = 529

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 445 WQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 502

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 503 DGIAGRQTLRRL 514


>gi|229527051|ref|ZP_04416446.1| general secretion pathway protein A [Vibrio cholerae 12129(1)]
 gi|229335448|gb|EEO00930.1| general secretion pathway protein A [Vibrio cholerae 12129(1)]
 gi|327484937|gb|AEA79344.1| General secretion pathway protein A [Vibrio cholerae LMA3894-4]
          Length = 529

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 2/84 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 445 WQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 502

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ 177
            G+    TL  + +    +   L+
Sbjct: 503 DGIAGRQTLRRLELLTQQKAPSLK 526


>gi|15642441|ref|NP_232074.1| general secretion pathway protein A [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|227082566|ref|YP_002811117.1| general secretion pathway protein A [Vibrio cholerae M66-2]
 gi|229507495|ref|ZP_04397000.1| general secretion pathway protein A [Vibrio cholerae BX 330286]
 gi|229512310|ref|ZP_04401789.1| general secretion pathway protein A [Vibrio cholerae B33]
 gi|229519446|ref|ZP_04408889.1| general secretion pathway protein A [Vibrio cholerae RC9]
 gi|229607000|ref|YP_002877648.1| general secretion pathway protein A [Vibrio cholerae MJ-1236]
 gi|254849569|ref|ZP_05238919.1| general secretion pathway protein A [Vibrio cholerae MO10]
 gi|255746883|ref|ZP_05420828.1| general secretion pathway protein A [Vibrio cholera CIRS 101]
 gi|262162048|ref|ZP_06031064.1| general secretion pathway protein A [Vibrio cholerae INDRE 91/1]
 gi|298500197|ref|ZP_07010002.1| general secretion pathway protein A [Vibrio cholerae MAK 757]
 gi|9657021|gb|AAF95587.1| general secretion pathway protein A [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|227010454|gb|ACP06666.1| general secretion pathway protein A [Vibrio cholerae M66-2]
 gi|229344135|gb|EEO09110.1| general secretion pathway protein A [Vibrio cholerae RC9]
 gi|229352275|gb|EEO17216.1| general secretion pathway protein A [Vibrio cholerae B33]
 gi|229355000|gb|EEO19921.1| general secretion pathway protein A [Vibrio cholerae BX 330286]
 gi|229369655|gb|ACQ60078.1| general secretion pathway protein A [Vibrio cholerae MJ-1236]
 gi|254845274|gb|EET23688.1| general secretion pathway protein A [Vibrio cholerae MO10]
 gi|255735285|gb|EET90685.1| general secretion pathway protein A [Vibrio cholera CIRS 101]
 gi|262028297|gb|EEY46954.1| general secretion pathway protein A [Vibrio cholerae INDRE 91/1]
 gi|297540890|gb|EFH76944.1| general secretion pathway protein A [Vibrio cholerae MAK 757]
          Length = 529

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 445 WQASFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 502

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 503 DGIAGRQTLRRL 514


>gi|284041692|ref|YP_003392032.1| peptidoglycan-binding protein [Conexibacter woesei DSM 14684]
 gi|283945913|gb|ADB48657.1| Peptidoglycan-binding domain 1 protein [Conexibacter woesei DSM
           14684]
          Length = 447

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 8/68 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+    V++L+  L +  D          F    + A++ FQ RHGLD  G+ 
Sbjct: 105 PRVALEKGDRGRQVKQLQRALGVHAD--------GIFGPGTKKALRKFQARHGLDVDGVA 156

Query: 158 DSSTLEAM 165
            S+T  A+
Sbjct: 157 GSATWSAL 164



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 8/60 (13%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           N    V  L+  L I+ D          F    E+AVK +Q   GL+  G+   +T +A+
Sbjct: 255 NEGSGVAALQRALGIAAD--------GEFGPGTEAAVKRYQASRGLEADGVAGPATRDAL 306



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                F      A++ FQ RHGLD  G+V  +T  A+
Sbjct: 200 PADGVFGPQSIKALRKFQDRHGLDVDGVVGPATWSAL 236


>gi|213966259|ref|ZP_03394443.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium amycolatum
           SK46]
 gi|213951111|gb|EEB62509.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium amycolatum
           SK46]
          Length = 394

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 12/76 (15%)

Query: 102 LHLGNSSVSVQRLRERLIISGDL------------DPSKGLSVAFDAYVESAVKLFQMRH 149
           L +G+ S  V  +R  L   G L                G    FD  + +A+  FQ   
Sbjct: 5   LKVGDRSPRVAEVRSTLARLGLLPNWEGSAAEENSPQWSGDDDLFDEDMRNALLAFQQSR 64

Query: 150 GLDPSGMVDSSTLEAM 165
           G+   G++  STL  +
Sbjct: 65  GVYADGIIRDSTLRLL 80



 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 10/161 (6%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR 100
           N    S  +D FD  +    +       + +   I  +   +   ++     G   L   
Sbjct: 38  NSPQWSGDDDLFDEDMRNALLAFQQSRGVYADGIIRDS--TLRLLREASYTLGTRVLSYD 95

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL    +   V  L+  L   G       +   F    +++V+ +Q+ +GL+P G+    
Sbjct: 96  PLSQ-MTGEDVGVLQATLQELGF--HDARVDGHFGPKTDASVREYQLNYGLEPDGICGPV 152

Query: 161 TLEAMNVPVDLRIRQLQVNL----MRIKKLLEQKMGLRYVL 197
           TL A++  +  R+    VN       ++ +  +  G R V+
Sbjct: 153 TLRALSY-LGRRVTGGSVNAFHEKEILRTMGPKLSGKRIVI 192


>gi|119488672|ref|ZP_01621681.1| endopeptidase, cell wall lytic activity [Lyngbya sp. PCC 8106]
 gi|119455095|gb|EAW36236.1| endopeptidase, cell wall lytic activity [Lyngbya sp. PCC 8106]
          Length = 364

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V++L+++L   G    +  +   F     +AV  FQ   GL P G+V   T
Sbjct: 123 LKYRSQGEEVKKLQQQLNNWGF--SAGTVDGIFGRKTRAAVIRFQKYQGLKPDGIVGPKT 180

Query: 162 LEAM 165
            +A+
Sbjct: 181 TQAL 184



 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 27/71 (38%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L  GN S +V  L++ L  +         +  +    E AVK  Q  H L   
Sbjct: 45  PVITAEVLRRGNYSQNVVTLQKDLKQAYCFPGDLRSTGYYGQTTEKAVKQLQRIHALQVD 104

Query: 155 GMVDSSTLEAM 165
           G+    T  A+
Sbjct: 105 GIAGKQTRSAL 115


>gi|325919153|ref|ZP_08181210.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas gardneri ATCC 19865]
 gi|325550360|gb|EGD21157.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas gardneri ATCC 19865]
          Length = 606

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G     VQ +++ L   G  D           F      AV  FQ +HGL P G+V 
Sbjct: 410 LKHGARGGEVQSMQQDLNRLGVRDAQGNRLAEDGRFGDNTREAVIAFQKQHGLQPDGVVG 469

Query: 159 SSTLEAM 165
            +T  A+
Sbjct: 470 RNTQAAL 476


>gi|111226207|ref|YP_717001.1| N-acetymuramyl-L-alanine amidase [Frankia alni ACN14a]
 gi|111153739|emb|CAJ65497.1| N-acetymuramyl-L-alanine amidase [Frankia alni ACN14a]
          Length = 423

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 108 SVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              V  L+ERL   G D+  + G    F    ESAV+ FQ   GLDP G     TL  +
Sbjct: 139 GDDVAALQERLFNMGFDIGRTDG---IFGPRTESAVRDFQRNRGLDPDGRCGPRTLREL 194



 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 32/117 (27%), Gaps = 53/117 (45%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLS------------------------------ 131
           + LG+   +V  +R  L   G L  +   S                              
Sbjct: 1   MRLGDQDSAVAEVRAALTYLGFLPVTPRQSGERGEAAPAVARPGESKGVGLPAAAADPAA 60

Query: 132 -----------------------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                                    FD  +++A++ FQ   GL   G++  +T  A+
Sbjct: 61  AVGVHSPAEEPAGGAGGAAPAPPDRFDRDLDNALRAFQQSRGLSVDGILGPNTARAL 117


>gi|194015382|ref|ZP_03053998.1| M15C subfamily peptidase [Bacillus pumilus ATCC 7061]
 gi|194012786|gb|EDW22352.1| M15C subfamily peptidase [Bacillus pumilus ATCC 7061]
          Length = 272

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +PL  G     V+ ++E L            + G+   +     +AVK FQ+ HGL   
Sbjct: 200 TKPLTKG---AGVKAVQEALAAVYYYPDKGAKNNGIDGYYGPKTANAVKRFQLMHGLVAD 256

Query: 155 GMVDSSTLEAM 165
           G+    T  A+
Sbjct: 257 GIYGPKTKAAL 267


>gi|37526507|ref|NP_929851.1| hypothetical protein plu2616 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785938|emb|CAE14990.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 360

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 42/185 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L      + +++N+    L     GK   +   + +G++ R TP++ + +++++ +P W
Sbjct: 88  MLLPDTPRQGIVINLAELRLYYFPKGKNNVIVYPIGIGQLGRNTPVMTTSVSQLIKDPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P   I+K           Y +   I                               G 
Sbjct: 148 T-PTKNIRK----------HYAEQGVI------------------------LPAVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M +  +   +    Y +H T     F   +R  +SGC+R+    D+   L    P  
Sbjct: 173 ENPMGAFALRLAAGRGEYLIHGTNAD--FGIGMR-VSSGCIRL-RPDDI-ETLFNAVPRG 227

Query: 364 SRYHI 368
           +R  I
Sbjct: 228 TRVQI 232


>gi|149189054|ref|ZP_01867342.1| putative general secretion pathway protein A [Vibrio shilonii AK1]
 gi|148837017|gb|EDL53966.1| putative general secretion pathway protein A [Vibrio shilonii AK1]
          Length = 554

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 7/87 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L      V+ L E+L     L  +   S  FD  ++  V++FQ    +D 
Sbjct: 464 WQRELQTTLRLNQQGAQVRLLDEKLSKV--LGGTPSGSDIFDEALKRKVEIFQRWQNIDV 521

Query: 154 SGMVDSSTLEAM-----NVPVDLRIRQ 175
            G+   +TL  +     N P  +  +Q
Sbjct: 522 DGIAGRNTLRKLELLTQNNPPSIEAKQ 548


>gi|261407913|ref|YP_003244154.1| spore cortex-lytic enzyme [Paenibacillus sp. Y412MC10]
 gi|329922217|ref|ZP_08277934.1| spore cortex-lytic enzyme [Paenibacillus sp. HGF5]
 gi|261284376|gb|ACX66347.1| spore cortex-lytic enzyme [Paenibacillus sp. Y412MC10]
 gi|328942330|gb|EGG38599.1| spore cortex-lytic enzyme [Paenibacillus sp. HGF5]
          Length = 270

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + +  G++   V  L+ RL   G       +   F +  + AVK FQ   G+   
Sbjct: 39  PTFSQQTIKFGSTGEDVYELQGRLKYLGFYHG--KIDSVFGSKTQGAVKWFQSEFGMKVD 96

Query: 155 GMVDSSTLEAM-NVPVDLR 172
           G+V       + N   D R
Sbjct: 97  GIVGPKVKLKLYNATKDFR 115


>gi|156934258|ref|YP_001438174.1| hypothetical protein ESA_02088 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532512|gb|ABU77338.1| hypothetical protein ESA_02088 [Cronobacter sakazakii ATCC BAA-894]
          Length = 344

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 50/167 (29%), Gaps = 40/167 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     G+  +    + +G   R+TP++ +RI + + NP W
Sbjct: 88  MLLPDTPREGIVVNLAELRLYYYPPGENRVEVYPIGIGLTGRETPVMTTRIIQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                             P                         +  +          G 
Sbjct: 148 T-----------------PTAAMRAR------------------SQAQGITLPAVIPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
            N +    +        Y +H T      +  +R  +SGC+R+R   
Sbjct: 173 NNPLGRFALRLQQGGGEYLIHGTNARS--SIGLRA-SSGCIRMRAAD 216


>gi|295704524|ref|YP_003597599.1| autolytic lysozyme [Bacillus megaterium DSM 319]
 gi|294802183|gb|ADF39249.1| autolytic lysozyme [Bacillus megaterium DSM 319]
          Length = 433

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 34/68 (50%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+S ++V+ L++ LI  G     +G    + +   +AVK  Q ++GL  +G  
Sbjct: 220 PSAQLQQGDSGLAVKELQQNLIKLGFELSQQGTDGQYGSETVAAVKALQEKYGLTSTGKA 279

Query: 158 DSSTLEAM 165
           D  TL  M
Sbjct: 280 DEKTLAKM 287


>gi|261211540|ref|ZP_05925828.1| general secretion pathway protein A/general secretion pathway
           protein B [Vibrio sp. RC341]
 gi|260839495|gb|EEX66121.1| general secretion pathway protein A/general secretion pathway
           protein B [Vibrio sp. RC341]
          Length = 783

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 12/109 (11%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIA-----FYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
            +  D    ++  +      + +       Y  +L +GG+     R L  G     V  L
Sbjct: 411 RLSGDDAELLVGGQRYRIARQWLEPLWRGQY-ALLWQGGF----SRTLKQGMRGDDVALL 465

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             +L     L   +  +  FD  +   V+LFQ    +   G+    TL 
Sbjct: 466 ESKLAQV--LGEPERSTDLFDKDISRKVELFQRWQSMHVDGIAGKQTLR 512


>gi|330830167|ref|YP_004393119.1| Gp28-like protein [Aeromonas veronii B565]
 gi|328805303|gb|AEB50502.1| Gp28-like protein [Aeromonas veronii B565]
          Length = 273

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++  +V  L+ RL  +G       +   F    E A+  FQ  + +   G     
Sbjct: 2   SLKKGDTGTAVADLQRRLTAAGY---PLAVDGWFGEATEQALIAFQRDYMIAAIGQAGPR 58

Query: 161 TLEAMNVPVDLRIRQLQVN 179
           TL A+      R  QL +N
Sbjct: 59  TLAALLGS--ERGNQLTIN 75


>gi|317047896|ref|YP_004115544.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
 gi|316949513|gb|ADU68988.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
          Length = 344

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 68/211 (32%), Gaps = 48/211 (22%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           ++ LL        +++N+    L     G+   +   + +G++   TP++ + I++ + N
Sbjct: 88  LQMLLPDTPHEG-IVINLAELRLYYYPKGEDRVIVYPIGIGQLGAATPVMVTSISQKIPN 146

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W    +I ++                 I +                            
Sbjct: 147 PTWTPTPNIRKR------------YAKEGITL-----------------------PGVVP 171

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            G  N M    +        Y +H T     F   +R  +SGC+R+    D+   L    
Sbjct: 172 AGPDNPMGLFAMRLARGTGQYLIHGTNAD--FGIGMR-VSSGCIRL-RPEDI-EALFDSV 226

Query: 361 PTWSRYH-----IEEVVKTRKTTPVKLATEV 386
           P  +R       ++  ++      +++   +
Sbjct: 227 PKGTRVQVINQPVKYAIEPDGKRYIEVHQPL 257


>gi|297563684|ref|YP_003682658.1| peptidoglycan-binding protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848132|gb|ADH70152.1| Peptidoglycan-binding domain 1 protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 245

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +   P L  G+S   V  ++ERL   G      G+   F  + E AV   Q   G+   
Sbjct: 43  SVSTGPELRQGSSGAGVSAVQERLAELGYWI--DGVDGQFGFHTEQAVVALQKAAGIARD 100

Query: 155 GMVDSSTLEAM 165
           G+V  +T  A+
Sbjct: 101 GVVGPATRAAL 111


>gi|229916617|ref|YP_002885263.1| carboxyl-terminal protease [Exiguobacterium sp. AT1b]
 gi|229468046|gb|ACQ69818.1| carboxyl-terminal protease [Exiguobacterium sp. AT1b]
          Length = 467

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+   +V  L + L   G      G    +   + +AVK FQ  +GL+ SG VD  
Sbjct: 379 SLQVGDYGDAVSNLHKILTGIGYEPG--GQPGYYGDTMANAVKAFQTDNGLEASGTVDEE 436

Query: 161 TLEAM 165
           T  A+
Sbjct: 437 TASAL 441


>gi|295704058|ref|YP_003597133.1| L-alanyl-D-glutamate peptidase [Bacillus megaterium DSM 319]
 gi|294801717|gb|ADF38783.1| L-alanyl-D-glutamate peptidase [Bacillus megaterium DSM 319]
          Length = 231

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+     +  G+    VQ ++  LI  G      G    F +    AVK FQ    L   
Sbjct: 153 PKASSMLIKYGDRGNHVQLIQRMLIHLGY-SLFGGADGIFGSSTFKAVKAFQQALYLQVD 211

Query: 155 GMVDSSTLEAM 165
           G+V   TLE +
Sbjct: 212 GIVGPKTLEKL 222


>gi|223985219|ref|ZP_03635303.1| hypothetical protein HOLDEFILI_02609 [Holdemania filiformis DSM
           12042]
 gi|223962797|gb|EEF67225.1| hypothetical protein HOLDEFILI_02609 [Holdemania filiformis DSM
           12042]
          Length = 639

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 9/113 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLII----SGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P  P   L LG+   +V  ++  L +     G+      +   F A  E+AV+ FQ R G
Sbjct: 523 PAYPGTSLRLGSRGENVSIMQMALNVINQGWGN-SNQLVVDGIFGAATEAAVRAFQTRVG 581

Query: 151 LDPSGMVDSSTLEAM----NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           L   G++  +T  A+    +V  +  +   + N    + L E    L Y + N
Sbjct: 582 LTADGIIGRNTWGAISEQYSVATNNAVALSEQNFELYRFLYENYTSLMYAIDN 634



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
             P   L  G  S SV  ++ +L        ++ P+  +   F    E+AVK FQ +  L
Sbjct: 334 SFPGLNLQRGVRSDSVAIIQNQLNRIAVNYPNIPPTYPIDGIFGEGTENAVKAFQRQFSL 393

Query: 152 DPSGMVDSSTLE 163
              G+V   T  
Sbjct: 394 TADGIVGKGTWY 405



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P R L  G+ +V VQ ++  L          P+  +  +F A   +AV  FQ   GL   
Sbjct: 434 PGRALRQGDRNVYVQEIQFYLQKIALFTSRVPTVKIDSSFGASTRNAVVAFQKLAGLTAD 493

Query: 155 GMVDSSTLEAM 165
           G+V   T + +
Sbjct: 494 GIVGRQTWDIL 504


>gi|313893325|ref|ZP_07826899.1| 3D domain protein [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442094|gb|EFR60512.1| 3D domain protein [Veillonella sp. oral taxon 158 str. F0412]
          Length = 202

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L     +   +    E AV+ FQ   GL   G V 
Sbjct: 24  AKTIDKGQRGHHVSKVQTMLKHQGFLH--DSVDGIYGHNTEQAVRKFQKSKGLAVDGRVG 81

Query: 159 SSTLEAM 165
            ST+ A+
Sbjct: 82  PSTMNAL 88


>gi|329122079|ref|ZP_08250687.1| cell wall lytic enzyme [Dialister micraerophilus DSM 19965]
 gi|327466886|gb|EGF12402.1| cell wall lytic enzyme [Dialister micraerophilus DSM 19965]
          Length = 422

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +  + L +G     +  L+  L+ +G L  ++ +   + +  E AV LFQ   GL  +G 
Sbjct: 20  ISAKTLKIGMKGQEITALQNSLVAAGYL--ARTVDSEYGSTTEKAVSLFQKDKGLTITGE 77

Query: 157 VDSSTLEAM 165
            D  TL+A+
Sbjct: 78  ADEKTLKAI 86



 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    ++ ++ +L   G LD    +   +    E+AVK  Q + GL  SG +D  T+  
Sbjct: 185 GDVGKDIENIQTKLQEYGYLDG--DIDGIYGNDTETAVKKLQEKSGLAISGSIDEETMRE 242

Query: 165 M 165
           +
Sbjct: 243 L 243



 Score = 44.4 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G+S   V  L+ +LI+ G           F    E+AVKLFQ  + L+ +G+ DS  ++
Sbjct: 261 IGDSGTDVGELQNKLILHGYNPGIADG--FFGNDTETAVKLFQKDNNLEVTGIADSVVIK 318

Query: 164 AM 165
            +
Sbjct: 319 KL 320



 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 10/111 (9%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
            I+ E   +T KAI   ++   R G   +  +    GN  + V++ ++ L  SG L+   
Sbjct: 73  TITGEADEKTLKAIKKAENKGYRNGGGIVYAK----GNLGIEVEKWQKVLYESGCLNG-- 126

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            +   +     +AV+LFQ  + +  SG +D  TL A+    + R  ++ + 
Sbjct: 127 DVDGIYGTETFNAVELFQKNNDIPVSGAIDEMTLSAL----EKRKEKIDLA 173


>gi|313891696|ref|ZP_07825303.1| peptidoglycan binding domain protein [Dialister microaerophilus
           UPII 345-E]
 gi|313119974|gb|EFR43159.1| peptidoglycan binding domain protein [Dialister microaerophilus
           UPII 345-E]
          Length = 422

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +  + L +G     +  L+  L+ +G L  ++ +   + +  E AV LFQ   GL  +G 
Sbjct: 20  ISAKTLKIGMKGQEITALQNSLVAAGYL--ARTVDSEYGSTTEKAVSLFQKDKGLTITGE 77

Query: 157 VDSSTLEAM 165
            D  TL+A+
Sbjct: 78  ADEKTLKAI 86



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    ++ ++ +L   G LD    +   + +  E+AVK  Q + GL  SG +D  T+  
Sbjct: 185 GDVGKDIENIQTKLQEYGYLDG--DIDGIYGSDTENAVKKLQEKSGLAISGSIDEETMRE 242

Query: 165 M 165
           +
Sbjct: 243 L 243



 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 10/111 (9%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
            I+ E   +T KAI   ++   R G   +  +    GN  + V++ ++ L  SG L+   
Sbjct: 73  TITGEADEKTLKAIKKAENKGYRNGGGIVYAK----GNLGIEVEKCQKVLYESGYLNG-- 126

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            +   +     +AVKLFQ  + +  SG +D  TL A+    + R  ++ + 
Sbjct: 127 DVDGIYGTETFNAVKLFQKNNDIPVSGAIDEMTLSAL----EKRKEKIDLA 173



 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G+S   V  L+ +LI+ G           F    E+AVKLFQ  + L+ +G+ DS  ++
Sbjct: 261 IGDSGTDVGELQNKLILHGYNPGIADG--FFGNDTETAVKLFQKDNNLEVTGIADSVVIK 318

Query: 164 AM 165
            +
Sbjct: 319 NL 320


>gi|125974454|ref|YP_001038364.1| cell wall hydrolase, SleB [Clostridium thermocellum ATCC 27405]
 gi|281418980|ref|ZP_06249998.1| spore cortex-lytic enzyme [Clostridium thermocellum JW20]
 gi|125714679|gb|ABN53171.1| cell wall hydrolase, SleB [Clostridium thermocellum ATCC 27405]
 gi|281407437|gb|EFB37697.1| spore cortex-lytic enzyme [Clostridium thermocellum JW20]
          Length = 234

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 4/94 (4%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           AI F+++I S  G+ +  +   + G++   V+ ++ +L I    +        +  Y+  
Sbjct: 21  AIVFWEEIYSLYGYSKAALS--YYGSTGQEVKNIQYKLAIWKYYNGKIDGIYGYKTYM-- 76

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           AV+ FQ ++GL   G+    TL A+ +P     +
Sbjct: 77  AVRKFQAKNGLKVDGIAGPETLAALGLPTGQAAK 110


>gi|269797668|ref|YP_003311568.1| 3D domain protein [Veillonella parvula DSM 2008]
 gi|269094297|gb|ACZ24288.1| 3D domain protein [Veillonella parvula DSM 2008]
          Length = 202

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L     +   +    E AV+ FQ   GL   G V 
Sbjct: 24  AKTIDRGQRGHHVSKVQTMLKNQGFLH--DSIDGIYGHNTEQAVRKFQKSKGLAVDGRVG 81

Query: 159 SSTLEAM 165
            +T+ A+
Sbjct: 82  PATMNAL 88


>gi|17231786|ref|NP_488334.1| hypothetical protein all4294 [Nostoc sp. PCC 7120]
 gi|17133430|dbj|BAB75993.1| all4294 [Nostoc sp. PCC 7120]
          Length = 508

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 18/96 (18%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++  +V RL++RL   G   P+   +  F      AV  FQ + GL  +G+V+  T
Sbjct: 218 LSEGSTGQAVTRLQQRLRQLGYFSPNPTGN--FRGITRDAVMAFQRKAGLPITGVVNQQT 275

Query: 162 LEAM-------NVP----VDLRIRQLQVNLMRIKKL 186
             A+       N P      +R  Q      R++ L
Sbjct: 276 WNALGGVAQAPNRPGLSTPQVRDLQ-----QRLRDL 306



 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 50/123 (40%), Gaps = 6/123 (4%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ-TEKAIAFYQDILSRGGWPELPIRPL 102
           ++  VN RF +      +G      + +   +   T++A+       + G    +    L
Sbjct: 86  FNGPVNGRFASITRSGVIGFQRANRLAADGVVGGGTQRALQRACRSATPG---AISRGDL 142

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG+   +V +L++ L      +     +  F +  + AV  FQ  + +   G+V + T 
Sbjct: 143 RLGSRGAAVSQLQQNLRRLRYFNGPN--TGYFGSETQQAVIRFQRANRIGADGIVGNQTA 200

Query: 163 EAM 165
           +A+
Sbjct: 201 QAI 203



 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+   +V+ +++RL   G    S  L   FD Y  ++V  FQ  + L+P+G VDS T
Sbjct: 365 LTVGDRGNNVRAVQQRLTQLGFFTGS--LDGYFDEYTRASVASFQQYYQLNPTGNVDSQT 422

Query: 162 LEAMNV 167
            +A+N+
Sbjct: 423 WQALNI 428



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 20/110 (18%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G++   V  ++  L   G  +    ++  F +   S V  FQ  + L   G+V   T 
Sbjct: 65  KVGSTGSEVAEIQRCLKRLGFFNG--PVNGRFASITRSGVIGFQRANRLAADGVVGGGTQ 122

Query: 163 EAMN------------------VPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
            A+                         + QLQ NL R++       G  
Sbjct: 123 RALQRACRSATPGAISRGDLRLGSRGAAVSQLQQNLRRLRYFNGPNTGYF 172



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +   P   G S+  V+ L++RL   G  + +   S+   A    A+  FQ  + L   G+
Sbjct: 282 VAQAPNRPGLSTPQVRDLQQRLRDLGYFNGNPTGSIG--AMTRDAIVRFQRDYRLTADGI 339

Query: 157 VDSSTLEAMNVPVDLR 172
            D   L+A++   + R
Sbjct: 340 ADVQILQAVSRVWEDR 355


>gi|260891972|ref|YP_003238069.1| spore cortex-lytic enzyme [Ammonifex degensii KC4]
 gi|260864113|gb|ACX51219.1| spore cortex-lytic enzyme [Ammonifex degensii KC4]
          Length = 228

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L+ G++   V R+++RL   G  D    +   F      AV+ FQ ++GL   G+V  +
Sbjct: 32  TLYWGSTGWHVMRVQQRLAQWGYYDG--PIDGVFGYKTWKAVRYFQWKNGLAVDGVVGPA 89

Query: 161 TLEAMNVP 168
           T  A+  P
Sbjct: 90  TWAALGFP 97


>gi|222056278|ref|YP_002538640.1| Peptidoglycan-binding domain 1 protein [Geobacter sp. FRC-32]
 gi|221565567|gb|ACM21539.1| Peptidoglycan-binding domain 1 protein [Geobacter sp. FRC-32]
          Length = 320

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
              +G+S   V  +++ L  +G           F    ++AV+ FQ   GL   G+V  +
Sbjct: 3   SYRIGSSGDDVMLIQKALQDAGFYQSQPDG--VFGPNTDAAVRNFQAASGLGGDGIVGPA 60

Query: 161 TLEAM 165
           T   +
Sbjct: 61  TWAKL 65


>gi|149882927|ref|YP_001294864.1| endolysin [Burkholderia phage BcepNY3]
 gi|148763578|gb|ABR10561.1| endolysin [Burkholderia phage BcepNY3]
          Length = 255

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 24/107 (22%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +G S  +V  L+ RL +          S  FDA V +A++ +Q  HG+ P G+  
Sbjct: 2   AAPLIVGASGRAVVFLQSRLGL--------AQSGQFDAGVATALRQWQEAHGMTPDGVYG 53

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           S T   M       +  +     R++             V++PA   
Sbjct: 54  SQTNAVM---TARALSDIADAAARLR-------------VDVPAFQA 84


>gi|15893974|ref|NP_347323.1| spore cortex-lytic protein [Clostridium acetobutylicum ATCC 824]
 gi|15023563|gb|AAK78663.1|AE007583_10 Spore cortex-lytic enzyme prepeptide; peptodoglycan-binding domain
           [Clostridium acetobutylicum ATCC 824]
 gi|325508100|gb|ADZ19736.1| Spore cortex-lytic enzyme prepeptide [Clostridium acetobutylicum EA
           2018]
          Length = 234

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +       G++   V +++ +L   G       +   +     +AVK FQ ++G+ P G
Sbjct: 34  AVNAITYKYGSNGSGVIQIQTKLKNWGYYTG--KIDGVYGYQTYTAVKKFQTKNGILPDG 91

Query: 156 MVDSSTLEAMNVPVDL 171
           +V ++T  A+ +    
Sbjct: 92  IVGTATSAALGMTTTQ 107


>gi|300853874|ref|YP_003778858.1| D-glutamyl-meso-diaminopimelate peptidase [Clostridium ljungdahlii
           DSM 13528]
 gi|300433989|gb|ADK13756.1| D-glutamyl-meso-diaminopimelate peptidase [Clostridium ljungdahlii
           DSM 13528]
          Length = 423

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             LG+    V +++  L   G       +   +    E AVK FQ  +GL P G++ S+T
Sbjct: 4   FKLGSRGTQVMKIQAVLRKIGY--NLNTIDGIYGRETEQAVKNFQKNNGLAPDGIIGSNT 61

Query: 162 LEAM 165
              +
Sbjct: 62  YRVL 65


>gi|260597669|ref|YP_003210240.1| hypothetical protein CTU_18770 [Cronobacter turicensis z3032]
 gi|260216846|emb|CBA30361.1| Uncharacterized protein ynhG [Cronobacter turicensis z3032]
          Length = 344

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 50/172 (29%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     G+       + +G   R+TP++ +RI + + NP W
Sbjct: 88  MLLPDTPREGIVVNLAELRLYYYPPGENRVAVYPIGIGLTGRETPVMTTRIIQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                             P                         +             G 
Sbjct: 148 T-----------------PTAAMRAR------------------SQAHGVTLPAVIPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +        Y +H T      +  +R  +SGC+R+R      ++
Sbjct: 173 NNPLGRFALRLQQGGGEYLIHGTNARS--SIGLRA-SSGCIRMRAADIKALF 221


>gi|90580763|ref|ZP_01236566.1| putative general secretion pathway protein A [Vibrio angustum S14]
 gi|90438031|gb|EAS63219.1| putative general secretion pathway protein A [Vibrio angustum S14]
          Length = 523

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 25/169 (14%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESY---HSIVNDRFDNFLARVDMGIDS 65
           +I    F        L L+ +P+  ++ D      Y   ++I +DR +  L +  + +  
Sbjct: 362 RISLACFSGKATLAKLGLINRPVIVTLKDGAQKPFYAVLYAITDDRIELLLGKERISV-- 419

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLI-ISGD 123
             P   +         +            P L  +  +  G +   V  L ++L    G+
Sbjct: 420 -TPKWFESRWDGQFSLLWR----------PPLGDKTSIRFGQNGPRVAWLDQQLNDFLGE 468

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL----EAMNVP 168
             P KG    FD  +   ++ FQ    L   G+    TL     AMN+P
Sbjct: 469 ESPRKG---YFDQSILDKLRRFQRSQDLAADGIAGPMTLMVLDSAMNLP 514


>gi|319760997|ref|YP_004124934.1| peptidase c1a papain [Alicycliphilus denitrificans BC]
 gi|317115558|gb|ADU98046.1| peptidase C1A papain [Alicycliphilus denitrificans BC]
          Length = 966

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLII-SGD----LDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           +P   L  G+    V RLR+ L+   GD              FDA +++A++ +Q   GL
Sbjct: 1   MPTYLLRQGSQDPLVARLRKVLVAELGDAAESYPQLDKGGATFDAMLDAALRCWQNGRGL 60

Query: 152 DPSGMVDSSTLEAM 165
              G+V    L A+
Sbjct: 61  IADGIVGPCNLLAL 74


>gi|291545287|emb|CBL18396.1| Putative peptidoglycan binding domain [Ruminococcus sp. 18P13]
          Length = 272

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   +  G     V+ ++ +L+  G       ++ AFD     AV+ FQ+   +   G+V
Sbjct: 206 PTDTVKPGAEGEDVKWIQWQLVRQG---AELEITGAFDEDTRQAVQAFQIDRDMKADGIV 262

Query: 158 DSSTLEAM 165
              T E +
Sbjct: 263 GEETREKL 270


>gi|227873353|ref|ZP_03991613.1| peptidoglycan-binding domain 1 [Oribacterium sinus F0268]
 gi|227840789|gb|EEJ51159.1| peptidoglycan-binding domain 1 [Oribacterium sinus F0268]
          Length = 455

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG     + +++ RL   G L  S  ++  FD   E+AVK  Q  + L   G V  +T 
Sbjct: 162 KLGFQGDDITKIQYRLYNLGYLTESGQINGTFDQDTETAVKKLQEVNKLTIDGTVGQTTY 221

Query: 163 EAMNVPVDLRIRQLQV 178
             +    +++   + +
Sbjct: 222 NLL-YSDEVKANIIAL 236



 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G  +  V+ L++RL+  G ++  +  +  +      AV+ FQ + G    G+    T
Sbjct: 89  LTVGVINSVVKDLQQRLMNLGYMEEDEP-TTYYGDATSKAVQYFQRQTGRKMDGITGVDT 147

Query: 162 LEAM 165
            +A+
Sbjct: 148 WDAL 151



 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHL 104
              +N  FD         +     +    T+ QT   +  Y D        E+    + L
Sbjct: 186 SGQINGTFDQDTETAVKKLQEVNKLTIDGTVGQTTYNL-LYSD--------EVKANIIAL 236

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G  S  V++ + RLI  G L      +  F    ++A++ FQ R+     G +   T   
Sbjct: 237 GEQSEIVKKYQNRLIALGYLSGEADGN--FGLSTQNAIRAFQSRNDQVVDGYLGPDTRSL 294

Query: 165 M 165
           M
Sbjct: 295 M 295



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           + LG  S  V+ ++  L+  G L      S  F    + AV  FQ  +GL   G   + T
Sbjct: 305 MRLGEQSDDVKNMQNLLVKYGYLS-QDKASGYFGELTKDAVIAFQSVNGLGTDGTAGAKT 363

Query: 162 LEAM 165
           L+ +
Sbjct: 364 LQLL 367


>gi|238019607|ref|ZP_04600033.1| hypothetical protein VEIDISOL_01476 [Veillonella dispar ATCC 17748]
 gi|237863805|gb|EEP65095.1| hypothetical protein VEIDISOL_01476 [Veillonella dispar ATCC 17748]
          Length = 202

 Score = 56.4 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L     +   +    E AV+ FQ   GL   G V 
Sbjct: 24  AKTIDRGQRGHHVSKVQTMLKHQGFLH--DSVDGIYGHNTEQAVRKFQKSKGLAVDGRVG 81

Query: 159 SSTLEAM 165
            ST+ A+
Sbjct: 82  PSTMNAL 88


>gi|330822859|ref|YP_004386162.1| peptidase C1A papain [Alicycliphilus denitrificans K601]
 gi|329308231|gb|AEB82646.1| peptidase C1A papain [Alicycliphilus denitrificans K601]
          Length = 966

 Score = 56.4 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLII-SGD----LDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           +P   L  G+    V RLR+ L+   GD              FDA +++A++ +Q   GL
Sbjct: 1   MPTYLLRQGSQDPLVARLRKVLVAELGDAAESYPQLDKGGATFDAMLDAALRCWQNGRGL 60

Query: 152 DPSGMVDSSTLEAM 165
              G+V    L A+
Sbjct: 61  IADGIVGPCNLLAL 74


>gi|328887419|emb|CCA60658.1| putative peptidoglycan binding domain 1 [Streptomyces venezuelae
           ATCC 10712]
          Length = 415

 Score = 56.4 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V++L E L   G +     +   + A   +AVK +Q  H L  +G V  
Sbjct: 176 RTLKTGDKGKDVRQLEENLAALGYV--GFDVDEEYTAKTAAAVKRWQKSHDLKQTGTVGP 233

Query: 160 STLE 163
             + 
Sbjct: 234 DQIA 237


>gi|328954135|ref|YP_004371469.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
           11109]
 gi|328454459|gb|AEB10288.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
           11109]
          Length = 346

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 40/163 (24%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + +L   +    +L+N+P  +L   +      R  + VG+ D QTP     I   + NP 
Sbjct: 89  RFILPNDLTDG-LLINLPELTLYHFDKEVFRRRYALAVGKSDWQTPTGTYIILNKVKNPT 147

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W++P SI Q++M           ++    ++                        R  PG
Sbjct: 148 WIVPASI-QEEM-----------EEMGKTVLT-----------------------RVPPG 172

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
             N + +      S     +H T  P          + GC+R+
Sbjct: 173 PTNPLGAY-WMATSAPGVGIHATTRPWSIGYYA---SHGCIRM 211


>gi|327385617|gb|AEA57091.1| S41A family carboxy-terminal peptidase [Lactobacillus casei BD-II]
          Length = 461

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 371 INATQLKPGDKGSDVKSLQQMLTALK--VGSVTVNSQYDDATQAAVKTFQQANKLDATGT 428

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL  +   +  ++ +
Sbjct: 429 ADQDTLATLAQKLSAQLTK 447


>gi|291453033|ref|ZP_06592423.1| peptidoglycan-binding domain 1 [Streptomyces albus J1074]
 gi|291355982|gb|EFE82884.1| peptidoglycan-binding domain 1 [Streptomyces albus J1074]
          Length = 320

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 13/96 (13%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           GGWP      L  G S  +V  ++  +   G           + +   +AVK FQ   GL
Sbjct: 189 GGWPR-----LDPGASGATVVVVQRLMTQRGH---QLVADGQYGSVSVAAVKKFQAAQGL 240

Query: 152 DPSGMVDSSTLEAM-----NVPVDLRIRQLQVNLMR 182
              G V  +T   +           ++  LQ  L R
Sbjct: 241 VADGQVGPATWPKLVLTLRQGSSGQQVSALQTALNR 276



 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 9/85 (10%)

Query: 86  QDILSRGG-----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           Q +++ G      WP+L +  L  G+S   V  L+  L           +  +F +   +
Sbjct: 238 QGLVADGQVGPATWPKLVL-TLRQGSSGQQVSALQTALNRR---SAGLVVDGSFGSVTTT 293

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAM 165
           AV+ +Q  + L   G     T  A+
Sbjct: 294 AVRAYQSLNRLVVDGEAGPVTWRAL 318


>gi|227535121|ref|ZP_03965170.1| Carboxy-terminal processing proteinase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227187262|gb|EEI67329.1| Carboxy-terminal processing proteinase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 390

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 300 INATQLKPGDKGSDVKSLQQMLTALK--VGSVTVNSQYDDATQAAVKTFQQANKLDATGT 357

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL  +   +  ++ +
Sbjct: 358 ADQDTLATLAQKLSAQLTK 376


>gi|191638388|ref|YP_001987554.1| Carboxy-terminal processing proteinase [Lactobacillus casei BL23]
 gi|190712690|emb|CAQ66696.1| Carboxy-terminal processing proteinase [Lactobacillus casei BL23]
 gi|327382417|gb|AEA53893.1| S41A family carboxy-terminal peptidase [Lactobacillus casei LC2W]
          Length = 483

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 393 INATQLKPGDKGSDVKSLQQMLTALK--VGSVTVNSQYDDATQAAVKTFQQANKLDATGT 450

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL  +   +  ++ +
Sbjct: 451 ADQDTLATLAQKLSAQLTK 469


>gi|116494881|ref|YP_806615.1| periplasmic protease [Lactobacillus casei ATCC 334]
 gi|116105031|gb|ABJ70173.1| Periplasmic protease [Lactobacillus casei ATCC 334]
          Length = 461

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 371 INATQLKPGDKGSDVKSLQQMLTALK--VGSVTVNSQYDDATQAAVKTFQQANKLDATGT 428

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL  +   +  ++ +
Sbjct: 429 ADQDTLATLAQKLSAQLTK 447


>gi|75910618|ref|YP_324914.1| glycoside hydrolase family protein [Anabaena variabilis ATCC 29413]
 gi|75704343|gb|ABA24019.1| Glycoside hydrolase, family 24 [Anabaena variabilis ATCC 29413]
          Length = 243

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G+    V  L+E L+     DP +     F    E+AVK FQ +  + P G+V+
Sbjct: 4   TETLRKGSKGSEVSELQEILVKLKF-DPGRIDGD-FGNKTEAAVKQFQQKQNITPDGVVE 61

Query: 159 SSTLEAMNVPVDLRIRQLQV 178
            +T  A+N  +  +I   ++
Sbjct: 62  INTRNALNKAIQRQIEIAKL 81


>gi|239981165|ref|ZP_04703689.1| hypothetical protein SalbJ_17134 [Streptomyces albus J1074]
          Length = 305

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 13/96 (13%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           GGWP      L  G S  +V  ++  +   G           + +   +AVK FQ   GL
Sbjct: 174 GGWPR-----LDPGASGATVVVVQRLMTQRGH---QLVADGQYGSVSVAAVKKFQAAQGL 225

Query: 152 DPSGMVDSSTLEAM-----NVPVDLRIRQLQVNLMR 182
              G V  +T   +           ++  LQ  L R
Sbjct: 226 VADGQVGPATWPKLVLTLRQGSSGQQVSALQTALNR 261



 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 9/85 (10%)

Query: 86  QDILSRGG-----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           Q +++ G      WP+L +  L  G+S   V  L+  L           +  +F +   +
Sbjct: 223 QGLVADGQVGPATWPKLVL-TLRQGSSGQQVSALQTALNRR---SAGLVVDGSFGSVTTT 278

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAM 165
           AV+ +Q  + L   G     T  A+
Sbjct: 279 AVRAYQSLNRLVVDGEAGPVTWRAL 303


>gi|161503528|ref|YP_001570640.1| hypothetical protein SARI_01604 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864875|gb|ABX21498.1| hypothetical protein SARI_01604 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 333

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        V+VN+    L     G+       + +G    +TP++ +RI + + NP W
Sbjct: 88  MLLPDAPREGVVVNLAELRLYYYPAGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +            +                G 
Sbjct: 148 TPTAGIRQRSL------------ERGITL---------PPVI--------------PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|160945978|ref|ZP_02093204.1| hypothetical protein FAEPRAM212_03511 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443709|gb|EDP20714.1| hypothetical protein FAEPRAM212_03511 [Faecalibacterium prausnitzii
           M21/2]
          Length = 156

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 6/152 (3%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINE--SYHSI-VNDRFDNFLARVDMGIDSDIPIISKE 73
           Y +L  G S  +  +  + L+ + +    Y ++  + +F     R          +    
Sbjct: 7   YSLLQRGSSGPDVALVQTWLNGVRDACTWYDALKADGKFGASTQRAVQEFQLKNKMNMDG 66

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            + Q    + + +     G     P   LH G+S  +V+ ++++L   G+     G    
Sbjct: 67  KVGQNTWNVLYTRYTAKHGLKVPYPGIVLHTGSSGGTVRLVQQKLNSLGERLKDDGK--- 123

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           + A   +AV+ FQ R+GL   G V  +T E M
Sbjct: 124 YGAATAAAVQRFQRRNGLPADGSVGCATWEKM 155


>gi|308172757|ref|YP_003919462.1| bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605621|emb|CBI41992.1| bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens DSM 7]
          Length = 385

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 107 SSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
              +V++++  L           P+ G+  A+     +AVK FQ+ +GL   G+    T 
Sbjct: 318 RGAAVKQIQTALAALYYYPDKGAPNNGIDGAYGPKTANAVKRFQLMNGLTADGIYGPKTK 377

Query: 163 EAM 165
             +
Sbjct: 378 AKL 380


>gi|237654227|ref|YP_002890541.1| peptidoglycan-binding protein [Thauera sp. MZ1T]
 gi|237625474|gb|ACR02164.1| Peptidoglycan-binding domain 1 protein [Thauera sp. MZ1T]
          Length = 274

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 95  PELPIR------PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           P +P +       +  G +   +  ++E     G    ++ +  AF    E+A++ FQ  
Sbjct: 193 PSIPRKDAEDRPTIRRGATGNPIFLVKEVQRKLGF--GAQQVDGAFGPLTEAAMRRFQRA 250

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           HGL P G+V   T +A++ 
Sbjct: 251 HGLVPDGIVGPRTWKALDT 269


>gi|159901702|ref|YP_001547948.1| N-acetylmuramoyl-L-alanine amidase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894741|gb|ABX07820.1| N-acetylmuramoyl-L-alanine amidase family 2 [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 356

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
           QT K +     I+    W  L IR + LG+S  +V+ ++ RL   G    S G    F A
Sbjct: 271 QTAKGLTV-NGIIGAATWESL-IRTVRLGDSGDAVRAVQTRLAAQGYTTTSDG---QFTA 325

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            + + VK FQ    L   G+V  ++   + +
Sbjct: 326 TLNALVKTFQTNRQLSVDGVVGINSWNHLAM 356



 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 23/119 (19%)

Query: 75  IAQTEKAIAFYQDILSRGG-WPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           + Q   A+  +    + G  WP L    P   L           LR           S  
Sbjct: 206 LPQLRAAVETHLAGGNVGRMWPTLKRNTPATSLAKTAQY----LLRTH-------GASIT 254

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV-------DLRIRQLQVNLM 181
              AF    E+AVK FQ   GL  +G++ ++T E++   V        +R  Q ++   
Sbjct: 255 ADGAFGPATEAAVKAFQTAKGLTVNGIIGAATWESLIRTVRLGDSGDAVRAVQTRLAAQ 313


>gi|78223669|ref|YP_385416.1| peptidoglycan binding domain-containing protein [Geobacter
           metallireducens GS-15]
 gi|78194924|gb|ABB32691.1| Peptidoglycan-binding domain 1 [Geobacter metallireducens GS-15]
          Length = 562

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +P R L  G  S +V +L+E L  +G    +  +S  +D   + A++ FQ   GLD  G 
Sbjct: 455 IPSR-LKPGGRSKAVGQLQELLKGAGYY--AGRISGTYDTVTQEAIRSFQTAEGLDADGR 511

Query: 157 VDSSTLEAM 165
               TL  +
Sbjct: 512 TGEKTLLLL 520


>gi|317509441|ref|ZP_07967059.1| N-acetylmuramoyl-L-alanine amidase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252270|gb|EFV11722.1| N-acetylmuramoyl-L-alanine amidase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 409

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 28/88 (31%), Gaps = 28/88 (31%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG----------------------------LSVA 133
           L  G+    V  +R  L   G L    G                            +   
Sbjct: 4   LRRGDIGPEVIAVRAVLEELGFLHSRNGSANPNLASATAARTEFGSVASANGSETKVEAL 63

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSST 161
           FDA ++ AV+ FQ   G+   G+V  +T
Sbjct: 64  FDAELDLAVRAFQQHRGMLVDGIVGPAT 91



 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V  L+ RL   G       +   F     + +  +Q   GL P G+   +TL ++
Sbjct: 115 MVGDDVADLQARLHDLGFY--MGLVDGYFGPKTHNGLVSYQREFGLTPDGICGPATLRSL 172

Query: 166 N 166
           N
Sbjct: 173 N 173


>gi|186682281|ref|YP_001865477.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186464733|gb|ACC80534.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 155

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P+  L+ G+S ++V+ L+  L+ +G      G    + A  E+AVK FQ +  L   G+V
Sbjct: 89  PMPTLYFGSSGLAVRVLQRLLVANGYAVRVDG---IYGALTETAVKAFQNQQNLGTDGIV 145

Query: 158 DSSTLEAMNV 167
              T  A+  
Sbjct: 146 GQRTWRALTT 155


>gi|332652765|ref|ZP_08418510.1| spore cortex-lytic enzyme SleC [Ruminococcaceae bacterium D16]
 gi|332517911|gb|EGJ47514.1| spore cortex-lytic enzyme SleC [Ruminococcaceae bacterium D16]
          Length = 408

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+    V+ L+  L ++ + + S     +   +      AV+ +Q + GL   G+V 
Sbjct: 282 LRPGDRGSDVRILQYMLALTAEFNESLTPIRVDGIYGNATAQAVRKYQAQAGLQVDGIVG 341

Query: 159 SSTLEAM 165
            +T  ++
Sbjct: 342 PNTWYSL 348



 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 4/72 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P  PL LG++   V  L+  +         +     ++  FD   E AVK FQ    L P
Sbjct: 180 PGTPLRLGSTGDDVLVLKTMINRVSQSYPAIPKLFPVTNVFDESTEQAVKTFQQIFNLTP 239

Query: 154 SGMVDSSTLEAM 165
            G+V  +T   +
Sbjct: 240 DGIVGKATWYKL 251


>gi|225180948|ref|ZP_03734396.1| cell wall hydrolase SleB [Dethiobacter alkaliphilus AHT 1]
 gi|225168429|gb|EEG77232.1| cell wall hydrolase SleB [Dethiobacter alkaliphilus AHT 1]
          Length = 249

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R + +      V  L+E L   G  D        F      +++ FQ  HGL+P G+V  
Sbjct: 36  RTIRITMRGEDVAELQEFLNEQGYRDEDAHG--IFGPLTYGSLQQFQKDHGLNPDGIVGP 93

Query: 160 STLE 163
            T  
Sbjct: 94  KTRR 97


>gi|330503105|ref|YP_004379974.1| PG-binding-1 domain-containing protein [Pseudomonas mendocina
           NK-01]
 gi|328917391|gb|AEB58222.1| PG-binding-1 domain-containing protein [Pseudomonas mendocina
           NK-01]
          Length = 285

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+ S +VQ+L+  L  +G      G    F    E AV+ +Q++ GL   G+    T
Sbjct: 7   LRHGDKSQAVQQLQWALNAAGARLEPDGD---FGDETEKAVRAYQLKVGLVVDGVAGEKT 63

Query: 162 LEAMNVPVDLRI---RQLQVNLMRI 183
           L A+      R+     L     R+
Sbjct: 64  LSALAGADCSRLLKNATLVAAAKRL 88


>gi|328910876|gb|AEB62472.1| bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens LL3]
          Length = 385

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 107 SSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
              +V++++  L           P+ G+  A+     +AVK FQ+ +GL   G+    T 
Sbjct: 318 RGAAVKQIQTALAALYYYPDKGAPNNGIDGAYGPKTANAVKRFQLMNGLTADGIYGPKTK 377

Query: 163 EAM 165
             +
Sbjct: 378 AKL 380


>gi|49083720|gb|AAT51122.1| PA2854 [synthetic construct]
          Length = 324

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 42/157 (26%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           V++N+    L     G+ V     + +GR    +PI ++RI     +P W  P SI  + 
Sbjct: 98  VVINLAEYRLYYYPKGQNVVHTYPLGIGREGWGSPIANTRITAKTKDPAWYPPASIRAE- 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++ +         PG  N +   K+ 
Sbjct: 157 ----------------------------------HAADGDPLPTVVPPGPDNPLGPYKLT 182

Query: 315 FYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                     H + +   F    R  + GC R+ N  
Sbjct: 183 LGVPGYLI--HGSNKK--FGIGTRT-SHGCFRMYNAD 214


>gi|89075907|ref|ZP_01162282.1| putative general secretion pathway protein A [Photobacterium sp.
           SKA34]
 gi|89048348|gb|EAR53926.1| putative general secretion pathway protein A [Photobacterium sp.
           SKA34]
          Length = 523

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 25/169 (14%)

Query: 9   KILYCFFVYLILPMGLSLVEKPIHASVLDEIINESY---HSIVNDRFDNFLARVDMGIDS 65
           +I    F        L L+ +P+  ++ D      Y   ++I +DR +  L +  + +  
Sbjct: 362 RISLACFSGKATLAKLGLINRPVIVTLKDGAQKPFYAVLYAITDDRIELLLGKERISV-- 419

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLI-ISGD 123
             P   +         +            P L  +  +  G +   V  L ++L    G+
Sbjct: 420 -TPNWFESRWDGQFSLLWR----------PPLGDKTSIRFGQNGPRVAWLDQQLNDFLGE 468

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL----EAMNVP 168
             P KG    FD  +   ++ FQ    L   G+    TL     AMN+P
Sbjct: 469 ESPRKG---YFDQSILDKLRRFQRSQDLAADGIAGPMTLMVLDSAMNLP 514


>gi|328880763|emb|CCA54002.1| hypothetical protein SVEN_0715 [Streptomyces venezuelae ATCC 10712]
          Length = 130

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           +P      G+S + V  L+E +   G    +          F A  +SAV+ FQ  HGL 
Sbjct: 55  IPRYDYSQGDSDICVAGLQELVARFGLTSWEQSGGNFTDGVFGARTDSAVRRFQSNHGLA 114

Query: 153 PSGMVDSSTLEAM 165
           P G+V   T E +
Sbjct: 115 PDGIVGPRTWEKL 127


>gi|302872715|ref|YP_003841351.1| carboxyl-terminal protease [Caldicellulosiruptor obsidiansis OB47]
 gi|302575574|gb|ADL43365.1| carboxyl-terminal protease [Caldicellulosiruptor obsidiansis OB47]
          Length = 472

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +    G+  + V   ++RL   G L      +   D    +AVK FQ  + L PSG++D
Sbjct: 381 TKKFKNGDMDLEVLAAQQRLFYLGYLS---SWTAKMDDSTVAAVKKFQKDNKLYPSGVLD 437

Query: 159 SSTLEAMN 166
            +T + +N
Sbjct: 438 ITTQKKLN 445


>gi|288554519|ref|YP_003426454.1| putative spore cortex-lytic enzyme precursor [Bacillus pseudofirmus
           OF4]
 gi|288545679|gb|ADC49562.1| putative spore cortex-lytic enzyme precursor [Bacillus pseudofirmus
           OF4]
          Length = 207

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++S  V+ L+++LI    LD     +  +    + AV+ FQ   GL   G+   +T
Sbjct: 31  LKQGDTSAEVEELQKQLIQLDYLDTDA--TGYYGPQTDQAVRNFQSDFGLVVDGLAGVAT 88


>gi|239832519|ref|ZP_04680848.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239824786|gb|EEQ96354.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 299

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G    SV  ++  L  +G    S  +   F A  E AV+ FQ  H L   G+V   T
Sbjct: 229 LRRGMRGPSVANVQRALRAAGFYHMS--IDGVFGAGTEQAVRSFQREHRLVSDGLVGRKT 286

Query: 162 LEAM 165
             A+
Sbjct: 287 FAAL 290


>gi|15598050|ref|NP_251544.1| hypothetical protein PA2854 [Pseudomonas aeruginosa PAO1]
 gi|107102403|ref|ZP_01366321.1| hypothetical protein PaerPA_01003465 [Pseudomonas aeruginosa PACS2]
 gi|116050857|ref|YP_790320.1| hypothetical protein PA14_27180 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890947|ref|YP_002439813.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           LESB58]
 gi|254235841|ref|ZP_04929164.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254241520|ref|ZP_04934842.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296388659|ref|ZP_06878134.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           PAb1]
 gi|313108000|ref|ZP_07794167.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           39016]
 gi|9948942|gb|AAG06242.1|AE004712_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115586078|gb|ABJ12093.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126167772|gb|EAZ53283.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126194898|gb|EAZ58961.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218771172|emb|CAW26937.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           LESB58]
 gi|310880669|gb|EFQ39263.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           39016]
          Length = 323

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 42/157 (26%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           V++N+    L     G+ V     + +GR    +PI ++RI     +P W  P SI  + 
Sbjct: 98  VVINLAEYRLYYYPKGQNVVHTYPLGIGREGWGSPIANTRITAKTKDPAWYPPASIRAE- 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++ +         PG  N +   K+ 
Sbjct: 157 ----------------------------------HAADGDPLPTVVPPGPDNPLGPYKLT 182

Query: 315 FYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                     H + +   F    R  + GC R+ N  
Sbjct: 183 LGVPGYLI--HGSNKK--FGIGTRT-SHGCFRMYNAD 214


>gi|330448768|ref|ZP_08312415.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328492959|dbj|GAA06912.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 522

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 8/81 (9%)

Query: 94  W-PELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W P L  +  +  G +   V  L ++L     L  +      FD  V   ++ FQ    L
Sbjct: 435 WRPPLGDKTSIRFGQNGPRVAWLDQQLN--DFLGENSPRKGYFDQSVLDKLRRFQRSQDL 492

Query: 152 DPSGMVDSSTL----EAMNVP 168
              G+    TL     AMN+P
Sbjct: 493 TADGIAGPMTLMVLDSAMNLP 513


>gi|295696768|ref|YP_003590006.1| carboxyl-terminal protease [Bacillus tusciae DSM 2912]
 gi|295412370|gb|ADG06862.1| carboxyl-terminal protease [Bacillus tusciae DSM 2912]
          Length = 473

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P L I RP+   ++  SV+ ++  L   G           F +    A++ FQ   GL P
Sbjct: 376 PPLSITRPITPDSTDTSVKIMQNFLEALGYFPG--RTDGYFSSQTAEALRAFQHAKGLSP 433

Query: 154 SGMVDSSTLEAMNVPVDLRIRQ 175
           +G++D  T  A+N  V  + +Q
Sbjct: 434 TGILDQDTAAALNDAVLAKEKQ 455


>gi|254412420|ref|ZP_05026194.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196180730|gb|EDX75720.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 178

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 88  ILSRGGWPELPIRP------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           I+    W  L          L+ G+    V  ++  L ++ D   S  +   F    E A
Sbjct: 78  IVDSLTWQALYQGAPVNMPVLNRGSRHDMVIPVQWVLHLTQDY--SAPIDGDFGEQTERA 135

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           V+ FQ RHGL   G+V   T  A+
Sbjct: 136 VRSFQKRHGLVEDGVVSEPTWYAL 159



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+    V  L++ L   G       +   FD  V  AV  FQ    L   G+VDS T
Sbjct: 26  LQLGSVGAEVLELQKLLAHCGTYTG--PMGGYFDRSVHDAVMEFQQSMFLKADGIVDSLT 83

Query: 162 LEAM------NVPVDLR 172
            +A+      N+PV  R
Sbjct: 84  WQALYQGAPVNMPVLNR 100


>gi|298292414|ref|YP_003694353.1| peptidoglycan-binding protein [Starkeya novella DSM 506]
 gi|296928925|gb|ADH89734.1| Peptidoglycan-binding domain 1 protein [Starkeya novella DSM 506]
          Length = 174

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G +   V+ L+E+L +  D          F    E A+K +Q +HGL   G+    T
Sbjct: 4   LKKGLAGAPVKILQEKLGVPAD--------GRFGPKTEEALKAYQKQHGLSADGIAGPDT 55

Query: 162 LEAM 165
             A+
Sbjct: 56  FAAL 59



 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 27/131 (20%)

Query: 39  IINESYHSIVNDRFDNFLARVDMGIDSDIPI--ISKETIA--QTEKAIAFYQDILSRGGW 94
           I+ E      + RF     + +  + +      +S + IA   T  A+  Y+ IL     
Sbjct: 15  ILQEKLGVPADGRF---GPKTEEALKAYQKQHGLSADGIAGPDTFAALGLYELIL----- 66

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                  L +G S  +V++L+  L I        G    F      AVK +Q  +GL+  
Sbjct: 67  -------LKVGTSGETVKKLQSALGI--------GADGKFGPGTAKAVKEYQAANGLEAD 111

Query: 155 GMVDSSTLEAM 165
           G    +TL  +
Sbjct: 112 GYAGPATLAKL 122


>gi|283833341|ref|ZP_06353082.1| protein ErfK/srfK [Citrobacter youngae ATCC 29220]
 gi|291070982|gb|EFE09091.1| protein ErfK/srfK [Citrobacter youngae ATCC 29220]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 67/206 (32%), Gaps = 43/206 (20%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL        ++VN+    L     G+ +     + +G    +TP++ +RI + + NP W
Sbjct: 88  LLLPDAPREGIIVNLAELRLYYYPPGENIVQVFPIGIGLQGLETPVMETRIGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I ++ +            +  I +                             G 
Sbjct: 148 TPTAGIRKRSL------------ERGITL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++    T T 
Sbjct: 173 NNPLGRFALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALFAQVRTGTP 229

Query: 364 SR---YHIEEVVKTRKTTPVKLATEV 386
            R     I+  ++      V++   +
Sbjct: 230 VRVINEPIKYSIEPNGMRYVEVHRPL 255


>gi|302536402|ref|ZP_07288744.1| lipoprotein [Streptomyces sp. C]
 gi|302445297|gb|EFL17113.1| lipoprotein [Streptomyces sp. C]
          Length = 288

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 99  IRPLHL-GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            +PL   G+ S  V+ L+ RL     +  +   +  + +   +AVK FQ +HGL  +G V
Sbjct: 79  AKPLMANGDESEQVRELQARLRQLKLVSTAP--TAFYGSKTTAAVKTFQSQHGLPATGSV 136

Query: 158 DSSTLEAMNV----PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           D +T + +      P D  +R    N   +     + M  R + ++  + +L  + +GKV
Sbjct: 137 DEATWQKVQGLTKKPTDDELRPPTTN--EVDAPDPRCMQGRVMCISKESRTLAWMIDGKV 194

Query: 214 GLRSTVIVGRVDRQT 228
                V  G  +  T
Sbjct: 195 VSTMDVRFGSENTPT 209


>gi|312200757|ref|YP_004020818.1| peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
 gi|311232093|gb|ADP84948.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
          Length = 1236

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 22/108 (20%)

Query: 78  TEKAIAFY---QDILSRG-----GWPELPI--------RPLHLG----NSSVSVQRLRER 117
           T  A+  Y   + I   G      W  L          RPL +      +   V+R++E 
Sbjct: 53  TASAVRRYQGVRGIAQDGIVGPATWEALAAEPNSPLAGRPLRVTIAGAVAGDDVRRVQEG 112

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L  +G       +   +      AV+ FQ+ HGL   G+V   TL A+
Sbjct: 113 LSSAGF--DPGPIDAVYGPMTARAVRRFQLVHGLGADGIVGPRTLAAL 158



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   IR LH       V+ L++ L   G  DP + L   +     SAV+ +Q   G+   
Sbjct: 12  PARSIRLLHGAVGGPDVELLQDALAAVGY-DPGR-LDGIYGPLTASAVRRYQGVRGIAQD 69

Query: 155 GMVDSSTLEAM----NVPVDLR 172
           G+V  +T EA+    N P+  R
Sbjct: 70  GIVGPATWEALAAEPNSPLAGR 91


>gi|295101500|emb|CBK99045.1| Putative peptidoglycan-binding domain-containing protein
           [Faecalibacterium prausnitzii L2-6]
          Length = 717

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD---P 126
           +S + +A+       +   LS G W       L  G++   V++++  L      +   P
Sbjct: 239 VSVKDLAELTSEGETFSGTLSDGSW-NFGSSVLKQGSTGSKVEQMQFWLSTLAQYESSIP 297

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S  +   + +   +AV+ FQ R+GL   G+V  +T   +
Sbjct: 298 SVTVDGVYGSGTAAAVRAFQRRYGLTVDGIVGRTTWTEL 336



 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 9/143 (6%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT--EKAIAFYQDIL 89
              +   + +   +  V+  F +          +   + S   + +T   K    Y DI 
Sbjct: 373 WLKIARTVYSSLNNVTVDGIFGSSTTAAVRRFQTYFGLTSDGVVGRTTWNKLYEVYNDIA 432

Query: 90  SRGGWPELPIRP----LHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAV 142
           +R   P L        L  G++  +V+ L+  L +        PS  +   F A  E+AV
Sbjct: 433 NRLLSPSLRPGEYPGVLRNGSTGTAVRELQFYLYLMSAYQSSIPSVSIDGRFGAATEAAV 492

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
           + +Q   GL   G+V   T +++
Sbjct: 493 RAYQRFAGLTVDGIVGRKTWDSL 515



 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL  G++  +V  L+ +L  I+ D        +   F   +   VK FQ +  L   
Sbjct: 164 PGSPLRQGSTGAAVFTLQRQLNRITKDYPFLGLLTVDGIFGRKMTETVKKFQRQFNLTAD 223

Query: 155 GMVDSSTLE 163
           G+V  ST  
Sbjct: 224 GVVGRSTWY 232



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRL------RERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           G  P+ P R +  G+    V+ +      R +L    D       + +F     +AVK  
Sbjct: 626 GQGPDYPDRAMKEGSVGADVRLIEGWLNDRSQLYCEEDY---VADNASFGPEDTAAVKET 682

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q R GL+P+G+VD  T  A+
Sbjct: 683 QQRAGLEPNGVVDRPTWAAL 702



 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 17/128 (13%)

Query: 98  PIRPLHLGNSSVSV---QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL +G  S +V     L +R+    D   S  LS  +     +A    Q   GL  +
Sbjct: 537 PGTPLTVGTDSSAVLYYTLLLQRIAYYYDSVASPALSSQYTQETANATASAQELLGLPAT 596

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+ D+ T  A        +  L + L       ++  G        P     A++ G VG
Sbjct: 597 GVADAETWTA--------VEALSLQLAAFTPNPDRHPGQG------PDYPDRAMKEGSVG 642

Query: 215 LRSTVIVG 222
               +I G
Sbjct: 643 ADVRLIEG 650


>gi|42519030|ref|NP_964960.1| hypothetical protein LJ1104 [Lactobacillus johnsonii NCC 533]
 gi|41583317|gb|AAS08926.1| hypothetical protein LJ_1104 [Lactobacillus johnsonii NCC 533]
          Length = 483

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G +   K ++  F+   ++AV  FQ  HGL   G+V+   
Sbjct: 394 LKKSMTGVDVATLQQYLTALGYMP--KHVTGVFNDETKNAVIEFQKAHGLTADGIVNGQV 451

Query: 162 LEAMNVPVDLRIR 174
              + + V  +++
Sbjct: 452 QAQLYLAVAQKLQ 464


>gi|323701875|ref|ZP_08113545.1| spore cortex-lytic enzyme [Desulfotomaculum nigrificans DSM 574]
 gi|323533179|gb|EGB23048.1| spore cortex-lytic enzyme [Desulfotomaculum nigrificans DSM 574]
          Length = 225

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L LG     VQ+L+  L   G       +   F     +AVK FQ R+GL   G+V  
Sbjct: 21  RTLKLGMEGYDVQQLQRNLGYLGY--NVGQVDGYFGWQTWAAVKEFQWRNGLSVDGIVGV 78

Query: 160 STLEAM 165
           +T  A+
Sbjct: 79  ATANAI 84


>gi|303231888|ref|ZP_07318597.1| 3D domain protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302513417|gb|EFL55450.1| 3D domain protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 201

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     VQ+++  L+  G L+ S      F    E AV+ FQ   GL   G V ++T+ A
Sbjct: 29  GQRGHHVQKIQTMLVHQGYLNDSADG--IFGRNTELAVRKFQKAKGLAVDGRVGAATMSA 86

Query: 165 M 165
           +
Sbjct: 87  L 87


>gi|229097030|ref|ZP_04227998.1| hypothetical protein bcere0020_22760 [Bacillus cereus Rock3-29]
 gi|228686426|gb|EEL40336.1| hypothetical protein bcere0020_22760 [Bacillus cereus Rock3-29]
          Length = 1027

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 98   PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            P   + LG+    V++++ RL      +    +   FD+  +  VK FQ R  L   G+V
Sbjct: 939  PGHVVKLGDKGAEVKKIQARLNEE---NIDVNIDGIFDSNTQMKVKEFQKRFELQVDGIV 995

Query: 158  DSSTLEAM 165
               T   +
Sbjct: 996  GPETWHTL 1003


>gi|300716485|ref|YP_003741288.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299062321|emb|CAX59438.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 344

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 42/175 (24%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+    L     G+   +   + +G++   TP + + +++ + NP W    +I ++ 
Sbjct: 99  IVVNVAELRLYYYPKGENKVVVYPIGIGQLGANTPPMVTSVSQKIPNPTWTPTPNIRKR- 157

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                              + E          G  N M    + 
Sbjct: 158 ----------------------------------YAAEGKTLPVTVPAGPDNPMGLYAMR 183

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                  Y +H T     F   +R  +SGC+R+    D+   L    P  +R  I
Sbjct: 184 LAYGQGHYLIHGTNAD--FGIGMR-VSSGCIRL-RPDDI-EALFNSVPKGTRVQI 233


>gi|227506196|ref|ZP_03936245.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium striatum ATCC
           6940]
 gi|227197220|gb|EEI77268.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium striatum ATCC
           6940]
          Length = 393

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 12/78 (15%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQM 147
           R LH+G+ SV V   R  L   G +   +G                FDA +   +K FQ 
Sbjct: 3   RVLHIGDQSVRVAEARATLARLGLMKDYQGTLSDWKQQKYSESDKIFDAELSEVIKAFQQ 62

Query: 148 RHGLDPSGMVDSSTLEAM 165
             G+ PSG++D  TL  +
Sbjct: 63  SRGIVPSGVIDDLTLREL 80



 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
            G     + +   F     +A+  +Q+ +GL   G+   +T+ A+++           N+
Sbjct: 115 LGFY--QQRVDGHFGPDTHAALAEYQLNYGLQNDGVCGPTTINALSLLGRRITGGSAHNI 172

Query: 181 ---MRIKKLLEQKMGLRYVL 197
               R++    +  G R V+
Sbjct: 173 QERERVRNAGPKLAGKRVVI 192


>gi|301026908|ref|ZP_07190304.1| LysM domain protein [Escherichia coli MS 69-1]
 gi|331663155|ref|ZP_08364065.1| putative LysM domain protein [Escherichia coli TA143]
 gi|300395255|gb|EFJ78793.1| LysM domain protein [Escherichia coli MS 69-1]
 gi|331058954|gb|EGI30931.1| putative LysM domain protein [Escherichia coli TA143]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 69/206 (33%), Gaps = 43/206 (20%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++    T T 
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALFSSVRTGTP 229

Query: 364 SR---YHIEEVVKTRKTTPVKLATEV 386
            +     ++  V+   T  V++   +
Sbjct: 230 VKVINEPVKYSVEPNGTRYVEVHRPL 255


>gi|254382818|ref|ZP_04998174.1| hypothetical protein SSAG_02477 [Streptomyces sp. Mg1]
 gi|194341719|gb|EDX22685.1| hypothetical protein SSAG_02477 [Streptomyces sp. Mg1]
          Length = 368

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
              P + L  G+S   V+RL +RL+ S  L   K  +  +D   E+AV  FQ RH +   
Sbjct: 296 KPAPAQSLQYGDSGAEVERL-QRLLASARLYRGK-FNGMYDDRTENAVSEFQWRHEIFDD 353

Query: 155 --GMVDSSTLEAM 165
             G+   +T +A+
Sbjct: 354 PWGVYGPATRKAL 366


>gi|256005192|ref|ZP_05430160.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 2360]
 gi|255990846|gb|EEU00960.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 2360]
 gi|316941590|gb|ADU75624.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 1313]
          Length = 234

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G++   V+ ++ +L I    +        +  Y+  AV+ FQ ++GL   G+    TL 
Sbjct: 42  YGSTGQEVKNIQYKLAIWKYYNGKIDGIYGYKTYM--AVRKFQAKNGLKVDGIAGPETLA 99

Query: 164 AMNVPVDLRIR 174
           A+ +P     +
Sbjct: 100 ALGLPTGQAAK 110


>gi|145297086|ref|YP_001139907.1| hypothetical protein cgR_2982 [Corynebacterium glutamicum R]
 gi|140847006|dbj|BAF56005.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 396

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 9/102 (8%)

Query: 102 LHLGNS--SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
              GN      V  ++  L   G    +  +   F      AV  +Q+ +G+   G+   
Sbjct: 95  YQPGNQLVGDDVVEIQSHLQELGFY--ADRVDGHFGELTHKAVMNYQLNYGMQVDGICGP 152

Query: 160 STLEAMNVPVDLRIR----QLQVNLMRIKKLLEQKMGLRYVL 197
            T+ A++  + LRI+    Q      R++    +  G R V+
Sbjct: 153 DTIRALSR-LGLRIKGGSAQAIRERERMRNAGPRLAGKRVVI 193



 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 13/80 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK-------------GLSVAFDAYVESAVKLF 145
            + L +G+ S  V  +R  L   G ++                     FD  +  ++K F
Sbjct: 2   SKVLRVGDRSPRVAEVRTTLARLGVIEGYSREMSAKTESQKFHEEETLFDEELSLSIKSF 61

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q   G+ PSG++D  TL A+
Sbjct: 62  QQARGVVPSGLIDDLTLRAI 81


>gi|119477591|ref|ZP_01617741.1| hypothetical protein GP2143_09020 [marine gamma proteobacterium
           HTCC2143]
 gi|119449094|gb|EAW30334.1| hypothetical protein GP2143_09020 [marine gamma proteobacterium
           HTCC2143]
          Length = 318

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 85/268 (31%), Gaps = 64/268 (23%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM---NVPVDLRIRQLQVNLMRIKKL 186
           ++ + D  +      +Q+  G +     + +    +     PV L I  +  N  R    
Sbjct: 43  VTTSADDTLVDLAARYQL--GYNVIRSANPAVDPWLPGEGTPVVLPINVILPNAER---- 96

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV-----GRVDRQTPILHSRINRIMFN 241
                    +++N+P   L A  +      S V V     GR D  TPI  +R+     N
Sbjct: 97  -------EGIIINVPEMRLYAYASNGPNPSSRVTVHPISVGRGDWTTPITKTRVTGRAEN 149

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P+SI                                    D ++        +  
Sbjct: 150 PDWYPPKSIR-----------------------------------DEHAARGDTLPTKVS 174

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
            G  N +    +      + ++H T +P  F   +   T GC+R+    D++  + +   
Sbjct: 175 AGPDNPLGRFLLMLDIP-SYFIHGTNKP--FGIGM-QVTHGCIRM-YPDDIEQLVKQTRN 229

Query: 362 TWSRYHIEEVVKTR---KTTPVKLATEV 386
                 + +  KT    +   V++   +
Sbjct: 230 NTPVTIVNQTFKTGWFEQQLYVEVHQPL 257


>gi|260771263|ref|ZP_05880190.1| general secretion pathway protein A [Vibrio furnissii CIP 102972]
 gi|260613860|gb|EEX39052.1| general secretion pathway protein A [Vibrio furnissii CIP 102972]
          Length = 530

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     + L  G    ++  L  +L     L   +     +D  V+  V++FQ    +  
Sbjct: 446 WQPSFYQTLRSGMRGEAITLLDAKLSRL--LGEPERHVTEYDQEVKRKVEIFQRWQHMQV 503

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 504 DGIAGRQTLRQL 515


>gi|254426449|ref|ZP_05040165.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
 gi|196187863|gb|EDX82829.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
          Length = 498

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 62/185 (33%), Gaps = 28/185 (15%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAF-------YQDILSR- 91
           + +    I     D         + S +      ++ +  +           Y+D +S+ 
Sbjct: 184 LQKPILPIWGSESDARAPSSAGELQSYLARFPGSSVWRIPRVGERGQAWNLSYKDKVSQP 243

Query: 92  -GGWP---ELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
            GG P   ELP   R L  G+    V+ L+  L        +   +  F+   E AV  F
Sbjct: 244 VGGNPSEFELPSLSRILRRGSVGEDVKALQRALNALAF--EAGNTNGEFNTQTERAVTRF 301

Query: 146 QMRHGLDPSGMVDSSTLEAM-------NVPVDLRIRQLQVNLMR-----IKKLLEQKMGL 193
           Q + G+   G V   T  A+       N P    +++L     R     ++         
Sbjct: 302 QQKAGITIDGEVGPETWSALGGELGLVNRPDQGILQELGNFAEREANRDLQWTSPTSEAE 361

Query: 194 RYVLV 198
           +Y+ +
Sbjct: 362 KYLEI 366


>gi|52079751|ref|YP_078542.1| N-acetylmuramoyl-L-alanine amidase [Bacillus licheniformis ATCC
           14580]
 gi|52785121|ref|YP_090950.1| hypothetical protein BLi01353 [Bacillus licheniformis ATCC 14580]
 gi|319646441|ref|ZP_08000671.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. BT1B_CT2]
 gi|52002962|gb|AAU22904.1| N-acetylmuramoyl-L-alanine amidase [Bacillus licheniformis ATCC
           14580]
 gi|52347623|gb|AAU40257.1| hypothetical protein BLi01353 [Bacillus licheniformis ATCC 14580]
 gi|317392191|gb|EFV72988.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. BT1B_CT2]
          Length = 354

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V++L+ RL+ +G   P  G   ++      AV   Q + G+   G+   ST
Sbjct: 195 LKKGMSGSHVKKLQTRLVAAGFSLPKYGADGSYGDETVHAVVSLQKKAGIKADGIYGPST 254



 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 104 LGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                 +V +++  L            + G+   +     +AVK FQ+ +GL   G+   
Sbjct: 284 PLMKGTAVTQIQTALAALYYYPDKGAKNNGIDGYYGMKTANAVKRFQLMYGLGADGIYGP 343

Query: 160 STLEAM 165
            T   M
Sbjct: 344 KTKAKM 349


>gi|544114|sp|Q99125|CWLX_BACLI RecName: Full=Probable N-acetylmuramoyl-L-alanine amidase; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           AltName: Full=ORFL3; Flags: Precursor
 gi|551735|gb|AAA22888.1| ORFL3 [Bacillus licheniformis]
          Length = 354

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V++L+ RL+ +G   P  G   ++      AV   Q + G+   G+   ST
Sbjct: 195 LKKGMSGSHVKKLQTRLVAAGFSLPKYGADGSYGDETVHAVVSLQKKAGIKADGIYGPST 254



 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 104 LGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                 +V +++  L            + G+   +     +AVK FQ+ +GL   G+   
Sbjct: 284 PLMKGTAVTQIQTALAALYYYPDKGAKNNGIDGYYGMKTANAVKRFQLMYGLGADGIYGP 343

Query: 160 STLEAM 165
            T   M
Sbjct: 344 KTKAKM 349


>gi|218548736|ref|YP_002382527.1| hypothetical protein EFER_1374 [Escherichia fergusonii ATCC 35469]
 gi|218356277|emb|CAQ88895.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
          Length = 333

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|324113443|gb|EGC07418.1| ykud domain-containing protein [Escherichia fergusonii B253]
 gi|325497145|gb|EGC95004.1| hypothetical protein ECD227_1242 [Escherichia fergusonii ECD227]
          Length = 333

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|312143852|ref|YP_003995298.1| Peptidase M23 [Halanaerobium sp. 'sapolanicus']
 gi|311904503|gb|ADQ14944.1| Peptidase M23 [Halanaerobium sp. 'sapolanicus']
          Length = 410

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L L N    V  +++ L   G    S G    F    E AVK FQ  +GL   G+V   T
Sbjct: 29  LRLNNRGSEVVEVQKYLTELGYDISSDG---IFGRATEEAVKDFQSSNGLSVDGIVGRET 85

Query: 162 LEAMNVPVDLRI 173
            + +      ++
Sbjct: 86  YQKLKNSFVEKV 97


>gi|296087729|emb|CBI34985.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLD------PSKGLSVAFDAYVESAVKLFQMRHG 150
           + ++  H G+    + +L++ L   G L        +      FD  VESA+K +Q  + 
Sbjct: 15  VDLQGCHKGDKVEGIHKLKKYLGQFGYLSYSHSKYHTHANDDDFDDLVESAIKTYQTNYH 74

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQ-VNLMRIKKLLEQKMGLRYVLV 198
           L+ +G +DS T+  M  P       +   N MR  +    K  L Y  +
Sbjct: 75  LNATGSLDSETVSQMVKPRCGAADIINGTNWMRSPRWPPSKTYLTYAFL 123


>gi|82777157|ref|YP_403506.1| hypothetical protein SDY_1909 [Shigella dysenteriae Sd197]
 gi|309788340|ref|ZP_07682944.1| lysM domain protein [Shigella dysenteriae 1617]
 gi|81241305|gb|ABB62015.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308923722|gb|EFP69225.1| lysM domain protein [Shigella dysenteriae 1617]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLSHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|220931432|ref|YP_002508340.1| cell wall hydrolase SleB [Halothermothrix orenii H 168]
 gi|219992742|gb|ACL69345.1| cell wall hydrolase SleB [Halothermothrix orenii H 168]
          Length = 229

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            + + G + EL  R L  G+    V  L+ +L           +   F    E AVKLFQ
Sbjct: 24  KVEASGYYMELGTRILKKGDEGPDVAILQRKLKELNLYRG--KIDGIFGPGTEKAVKLFQ 81

Query: 147 MRHGLDPSGMVDSSTLEAM 165
            ++ L   G+V   T   +
Sbjct: 82  EKNKLKVDGIVGPGTYSKL 100


>gi|154251395|ref|YP_001412219.1| peptidoglycan-binding domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155345|gb|ABS62562.1| Peptidoglycan-binding domain 1 protein [Parvibaculum
           lavamentivorans DS-1]
          Length = 310

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 6/75 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           ++  R L       +   V+ L   L+  G    +      FD  +E A+K FQ  +GL 
Sbjct: 239 DVTTRNLRLTSPRMTGNDVRALEAALVKEGY---AINCDGVFDEGLEKALKSFQQDYGLI 295

Query: 153 PSGMVDSSTLEAMNV 167
             G+   +T   + +
Sbjct: 296 ADGVAGPATRIMLGI 310


>gi|258544154|ref|ZP_05704388.1| ErfK/YbiS/YcfS/YnhG family protein [Cardiobacterium hominis ATCC
           15826]
 gi|258520596|gb|EEV89455.1| ErfK/YbiS/YcfS/YnhG family protein [Cardiobacterium hominis ATCC
           15826]
          Length = 300

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 49/165 (29%), Gaps = 43/165 (26%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+P   L     G+ V     + +GR    TP     I     NP
Sbjct: 84  RFILP-DAPREGIVINLPEMRLYYYPPGQNVVHVFAIGIGREGWATPKGILSIADKRANP 142

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI  +                                   ++            
Sbjct: 143 TWTPPASIRAE-----------------------------------HAANGDPLPPVVPA 167

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
           G  N +    +   + +  Y +H T +P      +R  + GC+R+
Sbjct: 168 GPDNPLGLFAMRLSNPS--YLLHGTNKPE--GVGMR-VSHGCIRL 207


>gi|118443295|ref|YP_878172.1| glycosy hydrolase family protein [Clostridium novyi NT]
 gi|118133751|gb|ABK60795.1| glycosyl hydrolase, family 25 [Clostridium novyi NT]
          Length = 323

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++RLI  G           F    E AVK FQ  + L   G+V   T 
Sbjct: 258 RRGARGNITKIIQQRLIDKGYYVGIYKADGVFRNDTELAVKKFQKNNNLKVDGIVGIETW 317

Query: 163 EAM 165
           +A+
Sbjct: 318 KAL 320


>gi|117623857|ref|YP_852770.1| hypothetical protein APECO1_755 [Escherichia coli APEC O1]
 gi|218558547|ref|YP_002391460.1| hypothetical protein ECS88_1728 [Escherichia coli S88]
 gi|237705624|ref|ZP_04536105.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|115512981|gb|ABJ01056.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|218365316|emb|CAR03037.1| conserved hypothetical protein [Escherichia coli S88]
 gi|226900381|gb|EEH86640.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294492763|gb|ADE91519.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           IHE3034]
 gi|315286396|gb|EFU45832.1| LysM domain protein [Escherichia coli MS 110-3]
 gi|323952185|gb|EGB48058.1| ykud domain-containing protein [Escherichia coli H252]
 gi|323956579|gb|EGB52317.1| ykud domain-containing protein [Escherichia coli H263]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|302558357|ref|ZP_07310699.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
 gi|302475975|gb|EFL39068.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
          Length = 231

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S   V +L+ R+              ++ A   +AVK FQ  +GL   G+   
Sbjct: 27  RTLSQGSSGSDVTQLQIRVAGWVTSGERLAYDGSYGARTAAAVKKFQAAYGLAADGVAGP 86

Query: 160 ST---LEAM 165
           +T   + A+
Sbjct: 87  ATFSKIYAL 95


>gi|260843984|ref|YP_003221762.1| hypothetical protein ECO103_1821 [Escherichia coli O103:H2 str.
           12009]
 gi|257759131|dbj|BAI30628.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|218705176|ref|YP_002412695.1| hypothetical protein ECUMN_1967 [Escherichia coli UMN026]
 gi|293405176|ref|ZP_06649168.1| L,D-transpeptidase YnhG [Escherichia coli FVEC1412]
 gi|298380819|ref|ZP_06990418.1| ynhG protein [Escherichia coli FVEC1302]
 gi|218432273|emb|CAR13163.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|291427384|gb|EFF00411.1| L,D-transpeptidase YnhG [Escherichia coli FVEC1412]
 gi|298278261|gb|EFI19775.1| ynhG protein [Escherichia coli FVEC1302]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|218699757|ref|YP_002407386.1| hypothetical protein ECIAI39_1380 [Escherichia coli IAI39]
 gi|218369743|emb|CAR17514.1| conserved hypothetical protein [Escherichia coli IAI39]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|206889744|ref|YP_002249108.1| LysM domain protein [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741682|gb|ACI20739.1| LysM domain protein [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 309

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 47/166 (28%)

Query: 185 KLLEQKMGLRY-VLVNIPAASLEAVEN---GKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            +L  ++     +++N+    L         ++     + +G    +TP+   +I+  + 
Sbjct: 86  WILPDRVNNFQGIIINLSEMRLYYFHKKSKEQLVTTFPIGIGDDGVETPMGKFKISHKIV 145

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +P SI Q+                                        P      
Sbjct: 146 NPPWYVPESIKQE---------------------------------------RPELPAVV 166

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
            PG  N + +  +   S  +  +H T  P     V R  T GC+R+
Sbjct: 167 PPGPENPLGTHAMRL-SGLSYLIHGTNRPWA---VGRKVTHGCIRL 208


>gi|194434782|ref|ZP_03067032.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Shigella
           dysenteriae 1012]
 gi|194416951|gb|EDX33070.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Shigella
           dysenteriae 1012]
 gi|332093910|gb|EGI98963.1| lysM domain protein [Shigella dysenteriae 155-74]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|303229630|ref|ZP_07316418.1| 3D domain protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302515755|gb|EFL57709.1| 3D domain protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 201

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     VQ+++  L+  G L+ S      F    E AV+ FQ   GL   G V 
Sbjct: 23  AKSVDKGQRGHHVQKIQTMLVHQGYLNDSADG--IFGHNTELAVRKFQKAKGLAVDGRVG 80

Query: 159 SSTLEAM 165
           ++T+ A+
Sbjct: 81  TATMSAL 87


>gi|300898541|ref|ZP_07116874.1| LysM domain protein [Escherichia coli MS 198-1]
 gi|300357805|gb|EFJ73675.1| LysM domain protein [Escherichia coli MS 198-1]
          Length = 331

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|297204486|ref|ZP_06921883.1| serine/threonine protein kinase [Streptomyces sviceus ATCC 29083]
 gi|297148706|gb|EFH29085.1| serine/threonine protein kinase [Streptomyces sviceus ATCC 29083]
          Length = 562

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 31/63 (49%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG+S   VQ+++  L   G      G+   F +  ++AV+ FQ   GLD  G+V   T 
Sbjct: 496 RLGDSGKRVQQVQCMLTERGYSVGGTGVDGEFGSGTQNAVRAFQNERGLDADGVVAHDTW 555

Query: 163 EAM 165
            A+
Sbjct: 556 VAL 558


>gi|293396322|ref|ZP_06640600.1| LysM domain/ErfK/YbiS/YcfS/YnhG domain protein [Serratia odorifera
           DSM 4582]
 gi|291421111|gb|EFE94362.1| LysM domain/ErfK/YbiS/YcfS/YnhG domain protein [Serratia odorifera
           DSM 4582]
          Length = 340

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 72/241 (29%), Gaps = 66/241 (27%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     G+   +   + +G+    TP+  + +++ + NP W
Sbjct: 90  MLLPDTPREGIVVNLAELRLYYYPKGENKVIVYPIGIGQTGMHTPLKVTSVSQKIPNPTW 149

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
               +I ++                                    + +          G 
Sbjct: 150 TPTANIRKR-----------------------------------YAAQGVTLPGVVPAGP 174

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +     +  Y +H T     F   +R  +SGC+R+    D+   L    P  
Sbjct: 175 ENPMGLFAMRLSMGHGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPNDI-EALFNMVPKG 229

Query: 364 SRYHI-----EEVVKTRKTTPVKLATE-----------VPVHFVYISAWSPKDSIIQFRD 407
           +R  I     +  V+      V++              +P+H              +F +
Sbjct: 230 TRVQIINEPVKVSVEPDGKRYVEVHQPLSKVESDDPQTMPIHL--------SKGQQKFVN 281

Query: 408 D 408
           D
Sbjct: 282 D 282


>gi|309701903|emb|CBJ01215.1| putative peptidoglycan-binding protein [Escherichia coli ETEC
           H10407]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|300924713|ref|ZP_07140659.1| LysM domain protein [Escherichia coli MS 182-1]
 gi|301326558|ref|ZP_07219899.1| LysM domain protein [Escherichia coli MS 78-1]
 gi|300419091|gb|EFK02402.1| LysM domain protein [Escherichia coli MS 182-1]
 gi|300846778|gb|EFK74538.1| LysM domain protein [Escherichia coli MS 78-1]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|281178748|dbj|BAI55078.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|237731316|ref|ZP_04561797.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906855|gb|EEH92773.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL        ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPREGIIVNLAELRLYYFPPGENIVQVFPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I ++ +            +  I +                             G 
Sbjct: 148 TPTPGIRKRSL------------ERGITL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRFALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|293409991|ref|ZP_06653567.1| conserved hypothetical protein [Escherichia coli B354]
 gi|331673236|ref|ZP_08374004.1| putative LysM domain protein [Escherichia coli TA280]
 gi|222033434|emb|CAP76175.1| Uncharacterized protein ynhG [Escherichia coli LF82]
 gi|284921599|emb|CBG34671.1| putative peptidoglycan-binding protein [Escherichia coli 042]
 gi|291470459|gb|EFF12943.1| conserved hypothetical protein [Escherichia coli B354]
 gi|312946278|gb|ADR27105.1| hypothetical protein NRG857_08405 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|331069434|gb|EGI40821.1| putative LysM domain protein [Escherichia coli TA280]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|193068955|ref|ZP_03049914.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E110019]
 gi|192957750|gb|EDV88194.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E110019]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|209769214|gb|ACI82919.1| hypothetical protein ECs2385 [Escherichia coli]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|255283883|ref|ZP_05348438.1| spore cortex-lytic enzyme SleC [Bryantella formatexigens DSM 14469]
 gi|255265604|gb|EET58809.1| spore cortex-lytic enzyme SleC [Bryantella formatexigens DSM 14469]
          Length = 413

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 11/94 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S  +V++++E+L    +   L P   +   F    E+AVK+FQ   GL   
Sbjct: 328 PGYALRIGSSGDAVRQIQEQLNAISNNYPLIPKIAVDGIFGPATENAVKVFQSVFGLTQD 387

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
           G+V   T          RI+ + V + RI +L  
Sbjct: 388 GIVGRRTWY--------RIQDIYVAVTRIAELYP 413


>gi|24113067|ref|NP_707577.1| hypothetical protein SF1707 [Shigella flexneri 2a str. 301]
 gi|30063192|ref|NP_837363.1| hypothetical protein S1840 [Shigella flexneri 2a str. 2457T]
 gi|110805655|ref|YP_689175.1| hypothetical protein SFV_1701 [Shigella flexneri 5 str. 8401]
 gi|157159013|ref|YP_001462972.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli E24377A]
 gi|191167846|ref|ZP_03029651.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B7A]
 gi|209918992|ref|YP_002293076.1| hypothetical protein ECSE_1801 [Escherichia coli SE11]
 gi|218554244|ref|YP_002387157.1| hypothetical protein ECIAI1_1730 [Escherichia coli IAI1]
 gi|218695239|ref|YP_002402906.1| hypothetical protein EC55989_1845 [Escherichia coli 55989]
 gi|256018128|ref|ZP_05431993.1| hypothetical protein ShiD9_04383 [Shigella sp. D9]
 gi|260855502|ref|YP_003229393.1| hypothetical protein ECO26_2406 [Escherichia coli O26:H11 str.
           11368]
 gi|260868169|ref|YP_003234571.1| hypothetical protein ECO111_2147 [Escherichia coli O111:H- str.
           11128]
 gi|293446052|ref|ZP_06662474.1| ynhG protein [Escherichia coli B088]
 gi|300820069|ref|ZP_07100245.1| LysM domain protein [Escherichia coli MS 107-1]
 gi|300821449|ref|ZP_07101596.1| LysM domain protein [Escherichia coli MS 119-7]
 gi|300904529|ref|ZP_07122368.1| LysM domain protein [Escherichia coli MS 84-1]
 gi|301303193|ref|ZP_07209319.1| LysM domain protein [Escherichia coli MS 124-1]
 gi|307310751|ref|ZP_07590397.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|309793444|ref|ZP_07687871.1| LysM domain protein [Escherichia coli MS 145-7]
 gi|331668362|ref|ZP_08369210.1| putative LysM domain protein [Escherichia coli TA271]
 gi|331677549|ref|ZP_08378224.1| putative LysM domain protein [Escherichia coli H591]
 gi|332279173|ref|ZP_08391586.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Shigella sp. D9]
 gi|24052040|gb|AAN43284.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30041444|gb|AAP17172.1| hypothetical protein S1840 [Shigella flexneri 2a str. 2457T]
 gi|110615203|gb|ABF03870.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|157081043|gb|ABV20751.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E24377A]
 gi|190902105|gb|EDV61849.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B7A]
 gi|209912251|dbj|BAG77325.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218351971|emb|CAU97703.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218361012|emb|CAQ98587.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|257754151|dbj|BAI25653.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257764525|dbj|BAI36020.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|281601115|gb|ADA74099.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Shigella flexneri
           2002017]
 gi|291322882|gb|EFE62310.1| ynhG protein [Escherichia coli B088]
 gi|300403523|gb|EFJ87061.1| LysM domain protein [Escherichia coli MS 84-1]
 gi|300525952|gb|EFK47021.1| LysM domain protein [Escherichia coli MS 119-7]
 gi|300527374|gb|EFK48436.1| LysM domain protein [Escherichia coli MS 107-1]
 gi|300841602|gb|EFK69362.1| LysM domain protein [Escherichia coli MS 124-1]
 gi|306908929|gb|EFN39425.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|308123031|gb|EFO60293.1| LysM domain protein [Escherichia coli MS 145-7]
 gi|313648960|gb|EFS13397.1| lysM domain protein [Shigella flexneri 2a str. 2457T]
 gi|315060983|gb|ADT75310.1| murein L,D-transpeptidase [Escherichia coli W]
 gi|315257519|gb|EFU37487.1| LysM domain protein [Escherichia coli MS 85-1]
 gi|320181296|gb|EFW56215.1| L,D-transpeptidase YnhG [Shigella boydii ATCC 9905]
 gi|323152815|gb|EFZ39085.1| lysM domain protein [Escherichia coli EPECa14]
 gi|323163472|gb|EFZ49298.1| lysM domain protein [Escherichia coli E128010]
 gi|323180994|gb|EFZ66532.1| lysM domain protein [Escherichia coli 1180]
 gi|323186049|gb|EFZ71405.1| lysM domain protein [Escherichia coli 1357]
 gi|323378445|gb|ADX50713.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11]
 gi|323948027|gb|EGB44019.1| ykud domain-containing protein [Escherichia coli H120]
 gi|324016508|gb|EGB85727.1| LysM domain protein [Escherichia coli MS 117-3]
 gi|324119162|gb|EGC13050.1| ykud domain-containing protein [Escherichia coli E1167]
 gi|331063556|gb|EGI35467.1| putative LysM domain protein [Escherichia coli TA271]
 gi|331074009|gb|EGI45329.1| putative LysM domain protein [Escherichia coli H591]
 gi|332101525|gb|EGJ04871.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Shigella sp. D9]
 gi|332343397|gb|AEE56731.1| conserved hypothetical protein [Escherichia coli UMNK88]
 gi|332756998|gb|EGJ87341.1| lysM domain protein [Shigella flexneri 4343-70]
 gi|332757787|gb|EGJ88116.1| lysM domain protein [Shigella flexneri 2747-71]
 gi|332758519|gb|EGJ88840.1| lysM domain protein [Shigella flexneri K-671]
 gi|332766884|gb|EGJ97084.1| putative L,D-transpeptidase YcfS [Shigella flexneri 2930-71]
 gi|333003811|gb|EGK23347.1| lysM domain protein [Shigella flexneri VA-6]
 gi|333003966|gb|EGK23501.1| lysM domain protein [Shigella flexneri K-218]
 gi|333005920|gb|EGK25436.1| lysM domain protein [Shigella flexneri K-272]
 gi|333018052|gb|EGK37357.1| lysM domain protein [Shigella flexneri K-304]
 gi|333018835|gb|EGK38128.1| lysM domain protein [Shigella flexneri K-227]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|183598859|ref|ZP_02960352.1| hypothetical protein PROSTU_02291 [Providencia stuartii ATCC 25827]
 gi|188021066|gb|EDU59106.1| hypothetical protein PROSTU_02291 [Providencia stuartii ATCC 25827]
          Length = 357

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 57/175 (32%), Gaps = 42/175 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L    E  K  +   + +G++ R TP + + +++ + +P W    +I    
Sbjct: 98  IIINLAELRLYYYPEGSKEVVVYPIGIGQLGRDTPEMVTSVSQSIKDPTWTPTANI---- 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                          N                   + E          G  N M    + 
Sbjct: 154 -------------RKNY------------------AKEGITLPAVVPAGPDNPMGLYALR 182

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                  Y +H T     F   +R  +SGC+R+    D+   L K  P  +R  +
Sbjct: 183 LAYGRGEYLIHGTNAD--FGIGMR-VSSGCIRL-RPDDI-EALFKTVPKGTRVQV 232


>gi|170682137|ref|YP_001743576.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli SMS-3-5]
 gi|300938999|ref|ZP_07153697.1| LysM domain protein [Escherichia coli MS 21-1]
 gi|170519855|gb|ACB18033.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           SMS-3-5]
 gi|300456102|gb|EFK19595.1| LysM domain protein [Escherichia coli MS 21-1]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|74311997|ref|YP_310416.1| hypothetical protein SSON_1478 [Shigella sonnei Ss046]
 gi|73855474|gb|AAZ88181.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|323169246|gb|EFZ54922.1| lysM domain protein [Shigella sonnei 53G]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|15831639|ref|NP_310412.1| hypothetical protein ECs2385 [Escherichia coli O157:H7 str. Sakai]
 gi|168751911|ref|ZP_02776933.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|168762261|ref|ZP_02787268.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|168770437|ref|ZP_02795444.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|168775025|ref|ZP_02800032.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|168782090|ref|ZP_02807097.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|168789812|ref|ZP_02814819.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC869]
 gi|188496112|ref|ZP_03003382.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           53638]
 gi|195937362|ref|ZP_03082744.1| hypothetical protein EscherichcoliO157_13082 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208810266|ref|ZP_03252142.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208816672|ref|ZP_03257792.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208820505|ref|ZP_03260825.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209399001|ref|YP_002270747.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|217328734|ref|ZP_03444815.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254793295|ref|YP_003078132.1| hypothetical protein ECSP_2245 [Escherichia coli O157:H7 str.
           TW14359]
 gi|261227877|ref|ZP_05942158.1| hypothetical protein EscherichiacoliO157_25212 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261258389|ref|ZP_05950922.1| hypothetical protein EscherichiacoliO157EcO_21562 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|293414994|ref|ZP_06657637.1| ynhG protein [Escherichia coli B185]
 gi|300918048|ref|ZP_07134669.1| LysM domain protein [Escherichia coli MS 115-1]
 gi|13361852|dbj|BAB35808.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|187769387|gb|EDU33231.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188014124|gb|EDU52246.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|188491311|gb|EDU66414.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           53638]
 gi|189000273|gb|EDU69259.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189360604|gb|EDU79023.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189367460|gb|EDU85876.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189370588|gb|EDU89004.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC869]
 gi|208724782|gb|EDZ74489.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208731015|gb|EDZ79704.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208740628|gb|EDZ88310.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160401|gb|ACI37834.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209769208|gb|ACI82916.1| hypothetical protein ECs2385 [Escherichia coli]
 gi|209769210|gb|ACI82917.1| hypothetical protein ECs2385 [Escherichia coli]
 gi|209769212|gb|ACI82918.1| hypothetical protein ECs2385 [Escherichia coli]
 gi|209769216|gb|ACI82920.1| hypothetical protein ECs2385 [Escherichia coli]
 gi|217318081|gb|EEC26508.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254592695|gb|ACT72056.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|291432642|gb|EFF05621.1| ynhG protein [Escherichia coli B185]
 gi|300414739|gb|EFJ98049.1| LysM domain protein [Escherichia coli MS 115-1]
 gi|320188366|gb|EFW63028.1| L,D-transpeptidase YnhG [Escherichia coli O157:H7 str. EC1212]
 gi|320641893|gb|EFX11261.1| hypothetical protein ECO5101_07362 [Escherichia coli O157:H7 str.
           G5101]
 gi|320647349|gb|EFX16157.1| hypothetical protein ECO9389_09098 [Escherichia coli O157:H- str.
           493-89]
 gi|320652643|gb|EFX20912.1| hypothetical protein ECO2687_03590 [Escherichia coli O157:H- str. H
           2687]
 gi|320653028|gb|EFX21224.1| hypothetical protein ECO7815_12520 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320658712|gb|EFX26389.1| hypothetical protein ECO5905_08454 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320668702|gb|EFX35507.1| hypothetical protein ECOSU61_21203 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326342045|gb|EGD65826.1| L,D-transpeptidase YnhG [Escherichia coli O157:H7 str. 1044]
 gi|326343597|gb|EGD67359.1| L,D-transpeptidase YnhG [Escherichia coli O157:H7 str. 1125]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|16129634|ref|NP_416193.1| murein L,D-transpeptidase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89108518|ref|AP_002298.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|157161143|ref|YP_001458461.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli HS]
 gi|170019972|ref|YP_001724926.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli ATCC 8739]
 gi|170081338|ref|YP_001730658.1| hypothetical protein ECDH10B_1812 [Escherichia coli str. K-12
           substr. DH10B]
 gi|194438521|ref|ZP_03070610.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           101-1]
 gi|238900893|ref|YP_002926689.1| hypothetical protein BWG_1492 [Escherichia coli BW2952]
 gi|253773365|ref|YP_003036196.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161739|ref|YP_003044847.1| hypothetical protein ECB_01647 [Escherichia coli B str. REL606]
 gi|256022659|ref|ZP_05436524.1| hypothetical protein E4_04749 [Escherichia sp. 4_1_40B]
 gi|300930852|ref|ZP_07146222.1| LysM domain protein [Escherichia coli MS 187-1]
 gi|300951270|ref|ZP_07165119.1| LysM domain protein [Escherichia coli MS 116-1]
 gi|300958559|ref|ZP_07170689.1| LysM domain protein [Escherichia coli MS 175-1]
 gi|301027877|ref|ZP_07191178.1| LysM domain protein [Escherichia coli MS 196-1]
 gi|312969703|ref|ZP_07783886.1| lysM domain protein [Escherichia coli 1827-70]
 gi|3025249|sp|P76193|YNHG_ECOLI RecName: Full=Probable L,D-transpeptidase YnhG; Flags: Precursor
 gi|1787968|gb|AAC74748.1| murein L,D-transpeptidase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85675073|dbj|BAA15458.2| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|157066823|gb|ABV06078.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           HS]
 gi|169754900|gb|ACA77599.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli ATCC 8739]
 gi|169889173|gb|ACB02880.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|194422531|gb|EDX38529.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           101-1]
 gi|238860319|gb|ACR62317.1| conserved protein [Escherichia coli BW2952]
 gi|242377405|emb|CAQ32154.1| L,D-transpeptidase YnhG [Escherichia coli BL21(DE3)]
 gi|253324409|gb|ACT29011.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973640|gb|ACT39311.1| hypothetical protein ECB_01647 [Escherichia coli B str. REL606]
 gi|253977835|gb|ACT43505.1| hypothetical protein ECD_01647 [Escherichia coli BL21(DE3)]
 gi|260449199|gb|ACX39621.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1]
 gi|299879033|gb|EFI87244.1| LysM domain protein [Escherichia coli MS 196-1]
 gi|300314768|gb|EFJ64552.1| LysM domain protein [Escherichia coli MS 175-1]
 gi|300449451|gb|EFK13071.1| LysM domain protein [Escherichia coli MS 116-1]
 gi|300461327|gb|EFK24820.1| LysM domain protein [Escherichia coli MS 187-1]
 gi|310337988|gb|EFQ03077.1| lysM domain protein [Escherichia coli 1827-70]
 gi|315136319|dbj|BAJ43478.1| hypothetical protein ECDH1ME8569_1622 [Escherichia coli DH1]
 gi|315618873|gb|EFU99456.1| lysM domain protein [Escherichia coli 3431]
 gi|323937281|gb|EGB33560.1| ykud domain-containing protein [Escherichia coli E1520]
 gi|323940655|gb|EGB36846.1| ykud domain-containing protein [Escherichia coli E482]
 gi|323962169|gb|EGB57764.1| ykud domain-containing protein [Escherichia coli H489]
 gi|323973943|gb|EGB69115.1| ykud domain-containing protein [Escherichia coli TA007]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|215486853|ref|YP_002329284.1| hypothetical protein E2348C_1763 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215264925|emb|CAS09311.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|26247928|ref|NP_753968.1| hypothetical protein c2073 [Escherichia coli CFT073]
 gi|227885903|ref|ZP_04003708.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 83972]
 gi|300994863|ref|ZP_07180976.1| LysM domain protein [Escherichia coli MS 45-1]
 gi|301050991|ref|ZP_07197837.1| LysM domain protein [Escherichia coli MS 185-1]
 gi|312966831|ref|ZP_07781049.1| lysM domain protein [Escherichia coli 2362-75]
 gi|331647169|ref|ZP_08348263.1| putative LysM domain protein [Escherichia coli M605]
 gi|26108331|gb|AAN80533.1|AE016761_108 Hypothetical protein ynhG precursor [Escherichia coli CFT073]
 gi|227837082|gb|EEJ47548.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 83972]
 gi|300297368|gb|EFJ53753.1| LysM domain protein [Escherichia coli MS 185-1]
 gi|300406203|gb|EFJ89741.1| LysM domain protein [Escherichia coli MS 45-1]
 gi|307553699|gb|ADN46474.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           ABU 83972]
 gi|312288295|gb|EFR16197.1| lysM domain protein [Escherichia coli 2362-75]
 gi|315290525|gb|EFU49899.1| LysM domain protein [Escherichia coli MS 153-1]
 gi|320195426|gb|EFW70051.1| L,D-transpeptidase YnhG [Escherichia coli WV_060327]
 gi|323187102|gb|EFZ72418.1| lysM domain protein [Escherichia coli RN587/1]
 gi|330911485|gb|EGH39995.1| l,D-transpeptidase YnhG [Escherichia coli AA86]
 gi|331043952|gb|EGI16088.1| putative LysM domain protein [Escherichia coli M605]
          Length = 334

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|327198296|ref|YP_004306871.1| gp27 [Burkholderia phage KS14]
 gi|310657259|gb|ADP02372.1| gp27 [Burkholderia phage KS14]
          Length = 268

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  L++RL  +G        +  FD   ESAV   Q   GL   G+    T
Sbjct: 5   LRKGDIGDEVLLLQKRLTRAGF---PVAETHVFDHDTESAVMTLQKARGLVIDGIAGPKT 61

Query: 162 LEAM 165
           + A+
Sbjct: 62  MIAL 65


>gi|268592601|ref|ZP_06126822.1| ErfK/YbiS/YcfS/YnhG family protein [Providencia rettgeri DSM 1131]
 gi|291312015|gb|EFE52468.1| ErfK/YbiS/YcfS/YnhG family protein [Providencia rettgeri DSM 1131]
          Length = 354

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 65/197 (32%), Gaps = 43/197 (21%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        +++N+    L     N +  +   + +G++ R TP + + +++ + +P W
Sbjct: 88  MLLPSTPRTGIVINLAELRLYYYPANSEEVIVYPIGIGQLGRDTPEMVTSVSQSIKDPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
               +I                   N                   + E          G 
Sbjct: 148 TPTANI-----------------RKNY------------------AKEGITLPAVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N M    +        Y +H T     F   +R  +SGC+R+    D+   L K  P  
Sbjct: 173 ENPMGLYALRLAYGRGEYLIHGTNAD--FGIGMR-VSSGCIRL-RPDDI-EALFKTVPKG 227

Query: 364 SRYH-IEEVVKTRKTTP 379
           +R   I++ VK  K T 
Sbjct: 228 TRVQVIDQPVKYSKETD 244


>gi|206599573|ref|YP_002242012.1| gp29 [Mycobacterium phage Brujita]
 gi|206282722|gb|ACI06243.1| gp29 [Mycobacterium phage Brujita]
 gi|302858466|gb|ADL71213.1| gp29 [Mycobacterium phage island3]
          Length = 314

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           +   V+ L+ RL    D      L     F    E  V+ FQ R GL   G+   +TL A
Sbjct: 189 TGERVKALQARLNR--DYPAYSDLDEDGEFGPLTEQVVREFQRRSGLLDDGIAGPATLAA 246

Query: 165 MNVPVD 170
           + +   
Sbjct: 247 LGLSFQ 252


>gi|62391939|ref|YP_227341.1| N-acetymuramyl-L-alanine amidase [Corynebacterium glutamicum ATCC
           13032]
 gi|41223086|emb|CAF19031.1| N-ACETYMURAMYL-L-ALANINE AMIDASE [Corynebacterium glutamicum ATCC
           13032]
          Length = 403

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 9/102 (8%)

Query: 102 LHLGNS--SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
              GN      V  ++  L   G    +  +   F      AV  +Q+ +G+   G+   
Sbjct: 102 YQPGNQLVGDDVVEIQSHLQELGFY--ADRVDGHFGELTHKAVMNYQLNYGMQVDGICGP 159

Query: 160 STLEAMNVPVDLRIR----QLQVNLMRIKKLLEQKMGLRYVL 197
            T+ A++  + LRI+    Q      R++    +  G R V+
Sbjct: 160 DTIRALSR-LGLRIKGGSAQAIRERERMRNAGPRLAGKRVVI 200



 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 13/80 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK-------------GLSVAFDAYVESAVKLF 145
            + L +G+ S  V  +R  L   G ++                     FD  +  ++K F
Sbjct: 9   SKVLRVGDRSPRVAEVRTTLARLGVIEGYSREMSAKTESQKFHEEETLFDEELSLSIKSF 68

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q   G+ PSG++D  TL A+
Sbjct: 69  QQARGVVPSGLIDDPTLRAI 88


>gi|301647861|ref|ZP_07247643.1| LysM domain protein [Escherichia coli MS 146-1]
 gi|301074002|gb|EFK88808.1| LysM domain protein [Escherichia coli MS 146-1]
          Length = 334

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|291282808|ref|YP_003499626.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O55:H7 str. CB9615]
 gi|290762681|gb|ADD56642.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O55:H7 str. CB9615]
          Length = 334

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|331683185|ref|ZP_08383786.1| putative LysM domain protein [Escherichia coli H299]
 gi|331079400|gb|EGI50597.1| putative LysM domain protein [Escherichia coli H299]
          Length = 334

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|222053246|ref|YP_002535608.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
 gi|221562535|gb|ACM18507.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
          Length = 439

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 45/168 (26%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK---VGLRSTVIVGRVDRQTPILHSRINRIM 239
           ++ +L      + ++VN+    L   +      V     V +G  +R TP+    + R +
Sbjct: 115 LRFILP-DAPRKGIVVNLATMRLFHYKGDNNALVVTTYPVGIGTKERPTPMGQMFVQRKV 173

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W +P SI +       + DP                                   R
Sbjct: 174 SRPTWYVPASIAED---HRKKGDP--------------------------------LPAR 198

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
             PG +N +    +     +  Y +H T +P          ++GC+R+
Sbjct: 199 VPPGPLNPLGECALYLSKPS--YLIHGTNKPASIGLNA---SNGCLRL 241


>gi|15613858|ref|NP_242161.1| hypothetical protein BH1295 [Bacillus halodurans C-125]
 gi|10173911|dbj|BAB05014.1| BH1295 [Bacillus halodurans C-125]
          Length = 881

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+S  SV+ ++ +L   G       +   F +  + AV+ FQ   GL   G+V
Sbjct: 401 PGVLLSTGSSGDSVRAVQRKLQERGYYHGV--IDGIFGSMTDRAVRSFQHAMGLQVDGIV 458

Query: 158 DSSTLEAM 165
              T  A+
Sbjct: 459 GRMTWNAL 466



 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   +  G+S   V+R++ERLI  G           F    + AV+ FQ   GLD  G+V
Sbjct: 319 PGYLISSGSSGNDVRRIQERLINMGY--SVGAADGIFGPITKRAVESFQRDTGLDVDGIV 376

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 377 GRLTWNQL 384



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
             P   +  G+    V ++++RL   G    +      F      AV  FQ  + L P G
Sbjct: 79  PFPGTLIGTGSRGEQVVKVQQRLNSLGY--NAGVADGIFGQGTRQAVINFQSDYFLSPDG 136

Query: 156 MVDSSTLEAM 165
           +V   T  A+
Sbjct: 137 IVGELTWNAL 146



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L +G+    V+ ++ +L   G           F +  E  VK FQ    L   G+V
Sbjct: 159 PGFLLRVGSRGEEVKIVQNQLNRLGF--NVGTADGIFGSGTEQGVKDFQTSRNLQVDGIV 216

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 217 GQETWNRL 224



 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            P     +G+    V  ++ +L   G           F    ESAV  FQ ++ L+  G+
Sbjct: 3   FPGVLYSVGSRGDEVAAIQRQLNQLGF--NVGTADGIFGQRTESAVIAFQKQNNLNSDGI 60

Query: 157 VDSSTLEAM 165
           V   T + +
Sbjct: 61  VGRLTWDKL 69



 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L LG +   V+ ++ +L  +     +  +   F    + AV  FQ  +GL   G+V
Sbjct: 241 PGVLLSLGATGDLVRSVQRQLNSNHY--NAGVVDGIFGGQTQQAVMNFQRTNGLSVDGIV 298

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 299 GRLTWDVL 306


>gi|153824309|ref|ZP_01976976.1| general secretion pathway protein A [Vibrio cholerae B33]
 gi|126518168|gb|EAZ75393.1| general secretion pathway protein A [Vibrio cholerae B33]
          Length = 259

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     R L  G     V  L  +L     L   +     FD  +   V+LFQ    +  
Sbjct: 175 WQASFSRTLKQGMQGADVALLESKLAQV--LGEPERPREQFDKDLSRKVELFQRWQNMHV 232

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 233 DGIAGRQTLRRL 244


>gi|318060180|ref|ZP_07978903.1| hypothetical protein SSA3_19714 [Streptomyces sp. SA3_actG]
          Length = 235

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 14/133 (10%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G  +  V+ L+ RL   G        +  F      A+  FQ   GL  SG++D++T 
Sbjct: 32  RKGQRTSDVRALQARLWSLGFFRQQP--TGFFGDVTAQALAAFQRDRGLGASGVLDAATW 89

Query: 163 EAM--NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL-----VNIPAASLEAVENGKVGL 215
             +    P   +       L     L   +   R +      V+  + +L  + +G+V  
Sbjct: 90  ARLRAAGPAPTKA-----ALYPETTLPPTRPDPRCLTGRALCVSKKSRTLAWMVDGRVVS 144

Query: 216 RSTVIVGRVDRQT 228
              V  G     T
Sbjct: 145 VMDVRFGSAYTPT 157


>gi|308172492|ref|YP_003919197.1| N-acetylmuramoyl-L-alanine amidase [Bacillus amyloliquefaciens DSM
           7]
 gi|307605356|emb|CBI41727.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus amyloliquefaciens DSM 7]
          Length = 323

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 107 SSVSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
              +V++++  L              G+  A+ A   +AVK FQ  +GL   G+    T 
Sbjct: 256 RGEAVKQIQTALAALHYYPDKSAKNFGIDSAYGAKTANAVKRFQSMYGLPADGIYGPKTK 315

Query: 163 EAM 165
             +
Sbjct: 316 AKL 318


>gi|239927067|ref|ZP_04684020.1| putative peptidodoglycan-binding membrane protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291435412|ref|ZP_06574802.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291338307|gb|EFE65263.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 227

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVDS 159
           L  G+    V  L+ RL+   D+         +DA + +AV  FQ+ +G+     G+   
Sbjct: 144 LREGDFGPEVTELQRRLLRIPDVYREGTTDGRYDAALSAAVARFQLWYGVRGDETGVYGD 203

Query: 160 STLEAM 165
            T  A+
Sbjct: 204 DTRLAL 209


>gi|253682264|ref|ZP_04863061.1| autolytic lysozyme (1,4-beta-N-acetylmuramidase)(Autolysin)
           [Clostridium botulinum D str. 1873]
 gi|253561976|gb|EES91428.1| autolytic lysozyme (1,4-beta-N-acetylmuramidase)(Autolysin)
           [Clostridium botulinum D str. 1873]
          Length = 322

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 27/63 (42%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++RL+  G      GL   F    E AVK FQ   GL   G+V   T 
Sbjct: 257 RRGAKGNITKIIQQRLLNKGYSLGVYGLDGVFGTKTEMAVKRFQKDCGLKIDGIVGRETW 316

Query: 163 EAM 165
           +A+
Sbjct: 317 KAL 319


>gi|154246694|ref|YP_001417652.1| peptidoglycan binding domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154160779|gb|ABS67995.1| Peptidoglycan-binding domain 1 protein [Xanthobacter autotrophicus
           Py2]
          Length = 170

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 8/67 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V+ L+ +L ++ D          F    E A+K +Q +HGL   G+    T
Sbjct: 4   LKRGLSGEPVKILQAKLGVAAD--------GKFGPGTEEALKAYQTQHGLAADGIAGPDT 55

Query: 162 LEAMNVP 168
             A+ +P
Sbjct: 56  FAALGLP 62



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 23/103 (22%)

Query: 78  TEKAIAFYQ---DILSRG----------GWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           TE+A+  YQ    + + G          G PEL +  L  G+   +V++L+  L I+ D 
Sbjct: 32  TEEALKAYQTQHGLAADGIAGPDTFAALGLPELIL--LTQGSKGETVKKLQTALGITAD- 88

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                   A+      AV+ FQ ++GL+  GM    TL  ++V
Sbjct: 89  -------GAYGPGTAKAVEAFQAKNGLEADGMAGPVTLSKIDV 124


>gi|238853074|ref|ZP_04643466.1| periplasmic protease [Lactobacillus gasseri 202-4]
 gi|238834322|gb|EEQ26567.1| periplasmic protease [Lactobacillus gasseri 202-4]
          Length = 482

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G L   K ++  FD   ++AV  FQ  H L   G+V+   
Sbjct: 393 LKKSMTGVDVATLQQYLTALGYLP--KHVTGVFDDETKNAVIKFQKEHDLTTDGIVNGQV 450

Query: 162 LEAMNVPVDLRIR 174
              + + V  +++
Sbjct: 451 QAQLYLAVAQKLQ 463


>gi|160943094|ref|ZP_02090331.1| hypothetical protein FAEPRAM212_00573 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445563|gb|EDP22566.1| hypothetical protein FAEPRAM212_00573 [Faecalibacterium prausnitzii
           M21/2]
          Length = 894

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 21/159 (13%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT--EKAIAFYQDIL 89
              +   +        V+ +F    A           + +   + +T  +K    Y DI 
Sbjct: 550 WLKIARTVYTSLESVTVDGKFGAGTAAAVRRFQRYFGLTADGVVGRTTWQKLYEVYNDIA 609

Query: 90  SR--------GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYV 138
           +R        G +P +    L  G++  +V+ L+  L +    +   P   +   F A  
Sbjct: 610 NRLLSSSLRPGEYPGV----LRSGSTGTAVRELQFYLYLMSAYESSIPPVSIDGKFGADT 665

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           E AV+ +Q   GL   G+V  +T  ++      R  QL+
Sbjct: 666 ERAVRAYQRFAGLTVDGVVGRTTWNSL----YGRASQLR 700



 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 6/80 (7%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLF 145
           LS G W +     L  G S  +V++++  L      D   PS  +   F     +AV+ F
Sbjct: 437 LSNGTWND---TVLSTGASGSAVEQVQFWLNTLAQYDSAIPSVKVDGVFGTATANAVRAF 493

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q ++GL   G+V  +T + +
Sbjct: 494 QRKYGLTVDGIVGQTTWKEL 513



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL  G+   +V  L+ +L  I+ D        +   F + + + V+ FQ +  L   
Sbjct: 343 PGTPLRQGSRGAAVFTLQRQLNRITKDYPFLGKLTVDGVFGSRMAATVRAFQKQFNLTAD 402

Query: 155 GMVDSSTLE 163
           G+V   T  
Sbjct: 403 GVVGRQTWY 411



 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 25/137 (18%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL------------- 97
           ++D+ +  V +         +     Q +  +     I+ +  W EL             
Sbjct: 468 QYDSAIPSVKVDGVFGTATANAVRAFQRKYGLTV-DGIVGQTTWKELYDEFLSIQSDNGT 526

Query: 98  ----PIRPLHLGNSSVSVQRL-----RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
               P  PL  G+S  +V+ +       R + +     S  +   F A   +AV+ FQ  
Sbjct: 527 PNAYPGTPLREGSSGQNVRLVQFWLKIARTVYTSL--ESVTVDGKFGAGTAAAVRRFQRY 584

Query: 149 HGLDPSGMVDSSTLEAM 165
            GL   G+V  +T + +
Sbjct: 585 FGLTADGVVGRTTWQKL 601


>gi|110641799|ref|YP_669529.1| hypothetical protein ECP_1625 [Escherichia coli 536]
 gi|191171695|ref|ZP_03033242.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           F11]
 gi|300987772|ref|ZP_07178350.1| LysM domain protein [Escherichia coli MS 200-1]
 gi|110343391|gb|ABG69628.1| hypothetical protein YnhG precursor [Escherichia coli 536]
 gi|190908025|gb|EDV67617.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           F11]
 gi|300306060|gb|EFJ60580.1| LysM domain protein [Escherichia coli MS 200-1]
 gi|324011457|gb|EGB80676.1| LysM domain protein [Escherichia coli MS 60-1]
          Length = 334

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+  ++   + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQIYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|119773864|ref|YP_926604.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B]
 gi|119766364|gb|ABL98934.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B]
          Length = 304

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 51/162 (31%), Gaps = 42/162 (25%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++NI    L     GK  +    + +G+V R TP    + + R   NP W  
Sbjct: 91  PDAPREGIVINIAEMRLYYYPKGKKIVEVLPIGIGQVGRDTPENWVTTVQRKRANPTWT- 149

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P + I+K+  A                    G  +      W              G  N
Sbjct: 150 PTARIRKEYAAK-------------------GVTLPPV---W------------PAGPDN 175

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            M    +   +      H T     F   +R  + GCVR+R+
Sbjct: 176 PMGLFALYIGNLYAI--HGTNAT--FGIGLR-VSQGCVRLRD 212


>gi|152986703|ref|YP_001347671.1| hypothetical protein PSPA7_2300 [Pseudomonas aeruginosa PA7]
 gi|150961861|gb|ABR83886.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 323

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 42/157 (26%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           V++N+    L     G+ V     + +GR    +PI ++RI     +P W  P SI  + 
Sbjct: 98  VVINLAEYRLYYYPKGQDVVHTYPLGIGREGWGSPIANTRITAKTKDPAWYPPASIRAE- 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++ +         PG  N +   K+ 
Sbjct: 157 ----------------------------------HAADGDPLPTVVPPGPDNPLGPYKLT 182

Query: 315 FYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                     H + +   F    R  + GC R+ N  
Sbjct: 183 LGVPGYLI--HGSNKK--FGIGTRT-SHGCFRMYNAD 214


>gi|323968444|gb|EGB63850.1| ykud domain-containing protein [Escherichia coli M863]
 gi|323978185|gb|EGB73271.1| ykud domain-containing protein [Escherichia coli TW10509]
 gi|327252795|gb|EGE64449.1| lysM domain protein [Escherichia coli STEC_7v]
          Length = 334

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|331653078|ref|ZP_08354083.1| putative LysM domain protein [Escherichia coli M718]
 gi|331049176|gb|EGI21248.1| putative LysM domain protein [Escherichia coli M718]
          Length = 334

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|23309016|ref|NP_602284.2| N-acetylmuramoyl-L-alanine amidase [Corynebacterium glutamicum ATCC
           13032]
 gi|21325865|dbj|BAC00486.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium glutamicum ATCC
           13032]
          Length = 414

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 9/102 (8%)

Query: 102 LHLGNS--SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
              GN      V  ++  L   G    +  +   F      AV  +Q+ +G+   G+   
Sbjct: 113 YQPGNQLVGDDVVEIQSHLQELGFY--ADRVDGHFGELTHKAVMNYQLNYGMQVDGICGP 170

Query: 160 STLEAMNVPVDLRIR----QLQVNLMRIKKLLEQKMGLRYVL 197
            T+ A++  + LRI+    Q      R++    +  G R V+
Sbjct: 171 DTIRALSR-LGLRIKGGSAQAIRERERMRNAGPRLAGKRVVI 211



 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 13/80 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK-------------GLSVAFDAYVESAVKLF 145
            + L +G+ S  V  +R  L   G ++                     FD  +  ++K F
Sbjct: 20  SKVLRVGDRSPRVAEVRTTLARLGVIEGYSREMSAKTESQKFHEEETLFDEELSLSIKSF 79

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q   G+ PSG++D  TL A+
Sbjct: 80  QQARGVVPSGLIDDPTLRAI 99


>gi|295103234|emb|CBL00778.1| Putative peptidoglycan-binding domain-containing protein
           [Faecalibacterium prausnitzii SL3/3]
          Length = 156

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 6/152 (3%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINE--SYHSI-VNDRFDNFLARVDMGIDSDIPIISKE 73
           Y +L  G S  +  +  + L+ + +    Y ++  + +F     R          +    
Sbjct: 7   YSLLQRGSSGPDVALVQTWLNGVRDACTWYDALKADGKFGASTQRAVQEFQLKNKMNMDG 66

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            + Q    + + +     G     P   LH G S  +V+ ++++L   G+     G    
Sbjct: 67  KVGQNTWNVLYTRYTAKHGLKVPYPGIVLHTGASGGTVRLVQQKLNSLGERLKDDGK--- 123

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           + A   +AV+ FQ R+GL   G V  +T E M
Sbjct: 124 YGAATAAAVQRFQRRNGLTADGSVGCATWEKM 155


>gi|317128889|ref|YP_004095171.1| NLP/P60 protein [Bacillus cellulosilyticus DSM 2522]
 gi|315473837|gb|ADU30440.1| NLP/P60 protein [Bacillus cellulosilyticus DSM 2522]
          Length = 470

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 18/163 (11%)

Query: 15  FVYLILPMGLSLVEKPIHASV-----LDEIINESYHSIVNDRFDN---FLARVDMGIDSD 66
           F   +       V+ P   S+      + + N  +    N  F        R       +
Sbjct: 46  FPQPLSSSAQIDVQSPYAQSLPVFQHSNTLNNNLFDQSKNQNFLTTSSLAERTSAVKAKN 105

Query: 67  IPIISKETIAQTEKAIAFYQ-DIL---SRGGWPELPIRPLHLGNSSVSVQRLRERLIISG 122
           +P   ++++      +A  + +I    ++  WP   +  L +G+    V+ ++E L   G
Sbjct: 106 VPT--EKSLRLIINQLANEEFEIKTDTNKNVWPVDTV--LSIGDHGPKVKIIQEHLSEIG 161

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                  +   +    E AV+ +Q  HGL+ +G VD  T+  +
Sbjct: 162 YYVQE--IDGLYGEKTEKAVERYQKEHGLNITGKVDHETIIYL 202



 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
              G+    ++ L+E L  +G  + +  +   + +  + AV++ Q  + L   G+     
Sbjct: 257 FQYGDEHEDIKELQELLNKAGYYNGT--IDGIYGSNTQQAVRMLQRDNDLMVDGLAGDQV 314

Query: 162 LEAMNVPVDLRIRQLQVNLM 181
            + +       ++++  NL 
Sbjct: 315 FDFL---KSSDLKKIADNLE 331


>gi|88811264|ref|ZP_01126520.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrococcus mobilis Nb-231]
 gi|88791803|gb|EAR22914.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrococcus mobilis Nb-231]
          Length = 353

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 68/229 (29%), Gaps = 87/229 (37%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAV-----ENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           +K +  +     +++NIP   L           +  +   V +GR D  TP+  + +   
Sbjct: 126 RKFILPRAPREGIVINIPELRLYYYPPAAKGKARQVITHPVGLGRQDWATPLGRASVVEK 185

Query: 239 MFNPYWVIPRSI-----IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           +  P W  P SI      + + +  +                                  
Sbjct: 186 IPQPTWYPPASIRAEHAARGEKLPGIV--------------------------------- 212

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNT--Y-MHDTPEPILFNNVVRFETSGCVRVRNII 350
                   PG  N +    +      +   Y +H T +P  +   +R  + GC+R+    
Sbjct: 213 -------PPGPNNPLGEYVLLL----SIPGYLIHGTNKP--YGVGMR-VSHGCIRL-YPE 257

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV---YISAW 396
           D+  +                         +++ + PVH V   Y  AW
Sbjct: 258 DIARF-----------------------FARVSRKTPVHIVDQPYKLAW 283


>gi|298529337|ref|ZP_07016740.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510773|gb|EFI34676.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 351

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 51/164 (31%), Gaps = 48/164 (29%)

Query: 184 KKLLEQKMGLRYVLVNIPAASL-EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L   + G   +++N+P   L     +  +     V +GR   +TP   +R+ + + +P
Sbjct: 116 WILPPTRHGE--IVINLPEMRLYRFYRDIDMVRTYPVGIGRDGFETPPGDARVQKRVEDP 173

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P S                                                    P
Sbjct: 174 SWTVPPS-----------------AREGFS------------------------RVVVPP 192

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           G  N +    I   SR++  +H T  P     V R  + GC+R+
Sbjct: 193 GPDNPLGGYWIGL-SRDSLGIHGTNFPW---GVGRKVSRGCIRL 232


>gi|226502831|ref|NP_001142095.1| hypothetical protein LOC100274259 [Zea mays]
 gi|194707100|gb|ACF87634.1| unknown [Zea mays]
          Length = 370

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           HLG     + ++++ L   G L P    S    FDA +E A+K++Q   GL  +G++D+S
Sbjct: 56  HLGEQQQGLAKVKDYLSRFGYLPPESSGSFNDVFDADLEEAIKVYQRNFGLGITGVMDAS 115

Query: 161 TLEAM 165
           T+  M
Sbjct: 116 TVAQM 120


>gi|200389916|ref|ZP_03216527.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|199602361|gb|EDZ00907.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
          Length = 333

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        V+VN+    L     G+       + +G    +TP++ +RI + + NP W
Sbjct: 88  MLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +            +                G 
Sbjct: 148 TPTAGIRQRSL------------ERGITL---------PPVI--------------PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|62179965|ref|YP_216382.1| LysM domain-containing protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62127598|gb|AAX65301.1| putative LysM domain [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322714432|gb|EFZ06003.1| LysM domain-containing protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 333

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        V+VN+    L     G+       + +G    +TP++ +RI + + NP W
Sbjct: 88  MLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +            +                G 
Sbjct: 148 TPTAGIRQRSL------------ERGITL---------PPVI--------------PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|282852054|ref|ZP_06261412.1| C-terminal processing peptidase [Lactobacillus gasseri 224-1]
 gi|282556814|gb|EFB62418.1| C-terminal processing peptidase [Lactobacillus gasseri 224-1]
          Length = 454

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G L   K ++  FD   ++AV  FQ  H L   G+V+   
Sbjct: 365 LKRSMTGVDVATLQQYLTALGYLP--KHVTGVFDDETKNAVIKFQKEHDLTTDGIVNGQV 422

Query: 162 LEAMNVPVDLRIR 174
              + + V  +++
Sbjct: 423 QAQLYLAVAQKLQ 435


>gi|116629567|ref|YP_814739.1| periplasmic protease [Lactobacillus gasseri ATCC 33323]
 gi|311110789|ref|ZP_07712186.1| carboxy- processing proteinase [Lactobacillus gasseri MV-22]
 gi|116095149|gb|ABJ60301.1| Periplasmic protease [Lactobacillus gasseri ATCC 33323]
 gi|311065943|gb|EFQ46283.1| carboxy- processing proteinase [Lactobacillus gasseri MV-22]
          Length = 482

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G L   K ++  FD   ++AV  FQ  H L   G+V+   
Sbjct: 393 LKRSMTGVDVATLQQYLTALGYLP--KHVTGVFDDETKNAVIKFQKEHDLTTDGIVNGQV 450

Query: 162 LEAMNVPVDLRIR 174
              + + V  +++
Sbjct: 451 QAQLYLAVAQKLQ 463


>gi|302391951|ref|YP_003827771.1| ErfK/YbiS/YcfS/YnhG family protein [Acetohalobium arabaticum DSM
           5501]
 gi|302204028|gb|ADL12706.1| ErfK/YbiS/YcfS/YnhG family protein [Acetohalobium arabaticum DSM
           5501]
          Length = 312

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 50/125 (40%), Gaps = 6/125 (4%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                +  L+  L   G  D     +  +  Y+  AVK FQ  + L  +G+V+ S  + +
Sbjct: 45  MEGNDIWELQRELKKLGFYDQQLNSTYNWSTYL--AVKEFQKANDLPTTGVVNESIWQQI 102

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
                 ++++ +         LE   G  ++L++     +    +G+      V VG+  
Sbjct: 103 ----AHKLKKGEKITEASSDDLEAPEGEVFLLIDTYKKKMTVYSDGEPYHEFPVAVGKPS 158

Query: 226 RQTPI 230
            ++PI
Sbjct: 159 TKSPI 163



 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G +   V   +E+L   G           F    E A+K F+  +GL      D +T
Sbjct: 248 LRPGQTGKDVLLFQEKLREYGF--DPGYTDGRFGDSTEKAIKEFKYIYGLQDDLTADQNT 305

Query: 162 LEAMN 166
              +N
Sbjct: 306 FYILN 310


>gi|157370425|ref|YP_001478414.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia proteamaculans 568]
 gi|157322189|gb|ABV41286.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia proteamaculans 568]
          Length = 337

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 47/198 (23%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+    L     G+   +   + +G+    TP+  + +++ + NP W    +I +K 
Sbjct: 100 IVVNLAELRLYYYPKGENKVIVYPIGIGQTGMHTPLQVTSVSQKIPNPTWTPTANI-RKR 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +    + P  +                                    G  N M    + 
Sbjct: 159 YLEKGVKLPGVV----------------------------------PAGPENPMGLFAMR 184

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH-----I 368
               +  Y +H T     F   +R  +SGC+R+    D+   L    P  +R       +
Sbjct: 185 LAMGHGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPTDI-EALFNMVPRGTRVQVINDPV 239

Query: 369 EEVVKTRKTTPVKLATEV 386
           +  V+      V++   +
Sbjct: 240 KISVEPDGKRYVEVHQPL 257


>gi|163802698|ref|ZP_02196589.1| putative general secretion pathway protein A [Vibrio sp. AND4]
 gi|159173586|gb|EDP58406.1| putative general secretion pathway protein A [Vibrio sp. AND4]
          Length = 541

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L       ++  L + L  +  ++     S  +D+ ++  V+LFQ   G+  
Sbjct: 453 WQAPLRDTLRSDMEGPAIDVLDQLLAQA--VNEQPLGSEVYDSELKERVELFQRWQGIGV 510

Query: 154 SGMVDSSTLEAMNVPVD 170
            G+    TLE +   V 
Sbjct: 511 DGIAGKQTLERLQQSVQ 527


>gi|170768916|ref|ZP_02903369.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia
           albertii TW07627]
 gi|170122464|gb|EDS91395.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia
           albertii TW07627]
          Length = 334

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|299538548|ref|ZP_07051831.1| spore cortex-lytic enzyme precursor [Lysinibacillus fusiformis ZC1]
 gi|298726135|gb|EFI66727.1| spore cortex-lytic enzyme precursor [Lysinibacillus fusiformis ZC1]
          Length = 271

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G     V  L+ RL   G           ++ Y   A++ FQ  +GL   G+  + T
Sbjct: 32  ITRGAYGDDVVELQARLQYLGFYKSKIDGKFGYNTY--WALRNFQENYGLPVDGIAGAKT 89

Query: 162 LEAM--NVPVDLRIRQLQVNL 180
            +A+  N   D +  + Q+N 
Sbjct: 90  KKALTGNSDYDEKWVKAQLNA 110


>gi|145298314|ref|YP_001141155.1| hypothetical protein ASA_1301 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851086|gb|ABO89407.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 305

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 59/166 (35%), Gaps = 43/166 (25%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +    +++N+P   L     GK   +   + +G + R+TP + + +     NP W
Sbjct: 88  MLLPDVPREGIVINLPELRLYYFPKGKNEVIVLPIGIGDIGRETPEMITTVIAKNPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P          ++R+   +L+   I +                            PG 
Sbjct: 148 -VP--------GPMVRK--SWLEQKGISL-----------------------PAVVPPGP 173

Query: 305 INAMASTKIEFYSRNNT--Y-MHDTPEPILFNNVVRFETSGCVRVR 347
            N +   K           Y +H T +   F   +R  ++GC+R+R
Sbjct: 174 DNPLG--KFAMRLGYGKRDYLIHGTNKE--FGVGLR-VSAGCIRLR 214


>gi|222054295|ref|YP_002536657.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
 gi|221563584|gb|ACM19556.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
          Length = 304

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 45/164 (27%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENG--KVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            ++ Q      +++N+    L     G  K  L   V +G   ++TP+    +   + NP
Sbjct: 100 WIIPQLPVQEGIVINLAEMRLYFFAPGDRKRILTFPVSIGEAGKETPLGSFSVIEKLANP 159

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI+Q+     LR+           +                             
Sbjct: 160 VWHVPPSILQER--PELRK----------TV---------------------------AA 180

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           G  N + S  +    ++   +H T  P       R  + GC+R+
Sbjct: 181 GPDNPLGSRALRLSIKD-VLIHGTNRPW---GQGRRVSHGCLRL 220


>gi|148378207|ref|YP_001252748.1| spore-cortex-lytic enzyme [Clostridium botulinum A str. ATCC 3502]
 gi|153930851|ref|YP_001382608.1| spore-cortex-lytic enzyme [Clostridium botulinum A str. ATCC 19397]
 gi|153935278|ref|YP_001386160.1| spore-cortex-lytic enzyme [Clostridium botulinum A str. Hall]
 gi|153939602|ref|YP_001389567.1| spore-cortex-lytic enzyme [Clostridium botulinum F str. Langeland]
 gi|170755801|ref|YP_001779835.1| spore-cortex-lytic enzyme [Clostridium botulinum B1 str. Okra]
 gi|170758560|ref|YP_001785532.1| spore-cortex-lytic enzyme [Clostridium botulinum A3 str. Loch
           Maree]
 gi|148287691|emb|CAL81756.1| spore cortex-lytic enzyme precursor [Clostridium botulinum A str.
           ATCC 3502]
 gi|152926895|gb|ABS32395.1| spore-cortex-lytic enzyme [Clostridium botulinum A str. ATCC 19397]
 gi|152931192|gb|ABS36691.1| spore-cortex-lytic enzyme [Clostridium botulinum A str. Hall]
 gi|152935498|gb|ABS40996.1| spore-cortex-lytic enzyme [Clostridium botulinum F str. Langeland]
 gi|169121013|gb|ACA44849.1| spore-cortex-lytic enzyme [Clostridium botulinum B1 str. Okra]
 gi|169405549|gb|ACA53960.1| spore-cortex-lytic enzyme [Clostridium botulinum A3 str. Loch
           Maree]
 gi|295317664|gb|ADF98041.1| spore-cortex-lytic enzyme [Clostridium botulinum F str. 230613]
 gi|322804472|emb|CBZ02022.1| spore cortex-lytic enzyme, lytic transglycosylase SleB [Clostridium
           botulinum H04402 065]
          Length = 231

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLH---------LGNSSVSVQRLRERLIISGDLDPS 127
             ++AI +   I+   G   L I P            G+    + +++ +L   G  +  
Sbjct: 6   YLKRAIIYVLAIMLAYGSTTLYILPYTNATKAVAYYYGHRGDIISQVQRKLKAWGYYNG- 64

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            G+   F     +AV+ FQ ++GL   G++   TL A+ +
Sbjct: 65  -GVDGIFGHQTYTAVRYFQSKNGLTVDGIIGDKTLVALGI 103


>gi|328957385|ref|YP_004374771.1| carboxy-terminal processing protease [Carnobacterium sp. 17-4]
 gi|328673709|gb|AEB29755.1| carboxy-terminal processing protease [Carnobacterium sp. 17-4]
          Length = 497

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   L + S  V+ L + L   G   P + +   FD   E AVK FQ    L   G+V 
Sbjct: 404 SKTYQLKDVSAEVENLEKVLEALGY--PVESVDGYFDESTEEAVKQFQTDKKLPVDGIVT 461

Query: 159 SSTLEAM 165
             T   +
Sbjct: 462 GETATQL 468


>gi|237806833|ref|YP_002891273.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
 gi|237499094|gb|ACQ91687.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
          Length = 307

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 49/162 (30%), Gaps = 42/162 (25%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                + +++N+    L     GK  +    + +G++   TP    + + R   NP W  
Sbjct: 94  PDTPRQGIVINVAEMRLYYYPKGKNTVEVLPIGIGQLGTDTPENWVTSVQRKRANPTWT- 152

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P + ++++                                 W              G  N
Sbjct: 153 PTAKVRREYAEKG----------------------EPLPAVW------------PAGPDN 178

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            M    +   +      H T  P  F   +R  + GCVR+RN
Sbjct: 179 PMGLFALYIGNLYAI--HGTNAP--FGIGLR-VSHGCVRLRN 215


>gi|91210891|ref|YP_540877.1| hypothetical protein UTI89_C1870 [Escherichia coli UTI89]
 gi|91072465|gb|ABE07346.1| hypothetical protein YnhG precursor [Escherichia coli UTI89]
 gi|307626836|gb|ADN71140.1| hypothetical protein UM146_08765 [Escherichia coli UM146]
          Length = 334

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQRLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|84496825|ref|ZP_00995679.1| hypothetical protein JNB_04860 [Janibacter sp. HTCC2649]
 gi|84383593|gb|EAP99474.1| hypothetical protein JNB_04860 [Janibacter sp. HTCC2649]
          Length = 340

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 3/77 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    +  G +   V  ++  L   G    S  +   F +     VK FQ    L   
Sbjct: 207 PTIAWSTVKSGATGFRVTTIQHLLKARG---QSLTVDGVFGSVTVGKVKAFQTSRSLLAD 263

Query: 155 GMVDSSTLEAMNVPVDL 171
           G+V   T  A+ V V  
Sbjct: 264 GVVGPKTWAALVVTVKS 280



 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 80  KAIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           KA    + +L+ G      W  L +  +  G+S  +V   ++ L   G    + G    F
Sbjct: 252 KAFQTSRSLLADGVVGPKTWAAL-VVTVKSGSSGQAVIGAQKALTARGYTCTADG---VF 307

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +   S  K FQ   GL   G+V   T   + +
Sbjct: 308 GSVTVSKAKAFQTSRGLLADGVVGPVTWAKLTI 340


>gi|168240884|ref|ZP_02665816.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194450901|ref|YP_002045380.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194409205|gb|ACF69424.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205339516|gb|EDZ26280.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 333

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        V+VN+    L     G+       + +G    +TP++ +RI + + NP W
Sbjct: 88  MLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +            +                G 
Sbjct: 148 TPTAGIRQRSL------------ERGITL---------PPVI--------------PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|159901701|ref|YP_001547947.1| peptidoglycan binding domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159894740|gb|ABX07819.1| Peptidoglycan-binding domain 1 protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 322

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           I+    W +L I     G+ +V V+ L+++L   G    S  +   F A   +AVK FQ 
Sbjct: 86  IVGPNTWEKLVIETNQ-GDVNVVVKALQKQLNKHG---ASLTVDGDFGAATLTAVKSFQG 141

Query: 148 RHGLDPSGMVDSSTLEAM 165
           R GL   G V  +T  A+
Sbjct: 142 RKGLTQDGSVGPNTWAAL 159



 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 17/97 (17%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            +   W ++       G+S V+V  ++  L   G    S  +   F     + VK FQ  
Sbjct: 27  AAARTWAQVND-----GDSGVNVYTVQALLKQRGY---SLDVDGDFGDQTLATVKSFQGS 78

Query: 149 HGLDPSGMVDSSTLEAM---------NVPVDLRIRQL 176
            GL   G+V  +T E +         NV V    +QL
Sbjct: 79  KGLTKDGIVGPNTWEKLVIETNQGDVNVVVKALQKQL 115


>gi|16764725|ref|NP_460340.1| hypothetical protein STM1375 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161614211|ref|YP_001588176.1| hypothetical protein SPAB_01954 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167994396|ref|ZP_02575488.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168263798|ref|ZP_02685771.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168463218|ref|ZP_02697149.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194442385|ref|YP_002040630.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|198245212|ref|YP_002215752.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|207857119|ref|YP_002243770.1| hypothetical protein SEN1670 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|16419895|gb|AAL20299.1| putative LysM domain protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161363575|gb|ABX67343.1| hypothetical protein SPAB_01954 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401048|gb|ACF61270.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|195634222|gb|EDX52574.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197939728|gb|ACH77061.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205327768|gb|EDZ14532.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205347648|gb|EDZ34279.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206708922|emb|CAR33252.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246583|emb|CBG24393.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267993262|gb|ACY88147.1| hypothetical protein STM14_1669 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157910|emb|CBW17405.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912360|dbj|BAJ36334.1| hypothetical protein STMDT12_C13910 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321224001|gb|EFX49064.1| L,D-transpeptidase YnhG [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323129645|gb|ADX17075.1| putative L,D-transpeptidase YnhG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|326623500|gb|EGE29845.1| Peptidoglycan-binding LysM [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332988262|gb|AEF07245.1| hypothetical protein STMUK_1341 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 333

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        V+VN+    L     G+       + +G    +TP++ +RI + + NP W
Sbjct: 88  MLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +            +                G 
Sbjct: 148 TPTAGIRQRSL------------ERGITL---------PPVI--------------PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|154686370|ref|YP_001421531.1| CtpA [Bacillus amyloliquefaciens FZB42]
 gi|154352221|gb|ABS74300.1| CtpA [Bacillus amyloliquefaciens FZB42]
          Length = 467

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 9/104 (8%)

Query: 79  EKAIA-FYQ-DILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +K I   YQ  +      P L  +     G+S  +V   ++ L   G    S  ++  +D
Sbjct: 354 KKGIKPQYQVKLPEYANLPYLDAKKTYKYGDSGTTVTNAQKMLKALGY---SVKVNGTYD 410

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
              E AVK FQ +  L  +G++   T   +   +    +QL  N
Sbjct: 411 KAFEQAVKQFQAKEKLKQTGIITGDTTAKLMTDLQ---KQLADN 451


>gi|312794502|ref|YP_004027425.1| carboxyl-terminal protease [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181642|gb|ADQ41812.1| carboxyl-terminal protease [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 472

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +    G+  + V   ++RL   G L      +   D    +AVK FQ  + L  SG++D
Sbjct: 381 TKKFKKGDMDLEVLAAQQRLFYLGYLS---SWTAKMDDSTVAAVKKFQKDNKLYTSGVLD 437

Query: 159 SSTLEAMN 166
            +T + +N
Sbjct: 438 ITTQKKLN 445


>gi|302794749|ref|XP_002979138.1| hypothetical protein SELMODRAFT_110370 [Selaginella moellendorffii]
 gi|300152906|gb|EFJ19546.1| hypothetical protein SELMODRAFT_110370 [Selaginella moellendorffii]
          Length = 361

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 91  RGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMR 148
            G W +L  +   H G+S  ++Q+L+   +  G L  S     ++FD  +E+AV+L+Q  
Sbjct: 37  AGAWADLLSLVDAHKGDSKPAIQKLKSYFVDFGYLGNSTLTADLSFDDALEAAVRLYQQN 96

Query: 149 HGLDPSGMVDSSTLEAMNVP 168
             L  +G +DS+T+  +  P
Sbjct: 97  FHLPVTGNLDSATIAQLVTP 116


>gi|168239256|ref|ZP_02664314.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168822241|ref|ZP_02834241.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194738000|ref|YP_002114390.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|204927803|ref|ZP_03219004.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|194713502|gb|ACF92723.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197287980|gb|EDY27367.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204323145|gb|EDZ08341.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205341306|gb|EDZ28070.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320086144|emb|CBY95918.1| Uncharacterized protein ynhG Flags: Precursor [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322616759|gb|EFY13668.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619981|gb|EFY16854.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622292|gb|EFY19137.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627815|gb|EFY24605.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633086|gb|EFY29829.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636668|gb|EFY33371.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641307|gb|EFY37948.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644925|gb|EFY41458.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650236|gb|EFY46650.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655811|gb|EFY52113.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660137|gb|EFY56376.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665297|gb|EFY61485.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669554|gb|EFY65702.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673480|gb|EFY69582.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677408|gb|EFY73472.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679929|gb|EFY75968.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687401|gb|EFY83373.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192354|gb|EFZ77585.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198627|gb|EFZ83728.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203108|gb|EFZ88139.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208673|gb|EFZ93611.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213812|gb|EFZ98590.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217650|gb|EGA02365.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323218998|gb|EGA03508.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227187|gb|EGA11360.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229452|gb|EGA13575.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232675|gb|EGA16771.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240287|gb|EGA24331.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242725|gb|EGA26746.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323245936|gb|EGA29924.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252513|gb|EGA36357.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255061|gb|EGA38848.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323267154|gb|EGA50639.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271522|gb|EGA54943.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 333

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        V+VN+    L     G+       + +G    +TP++ +RI + + NP W
Sbjct: 88  MLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +            +                G 
Sbjct: 148 TPTAGIRQRSL------------ERGITL---------PPVI--------------PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|167551660|ref|ZP_02345414.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|168233565|ref|ZP_02658623.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194471756|ref|ZP_03077740.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197248056|ref|YP_002146664.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197263600|ref|ZP_03163674.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|238910809|ref|ZP_04654646.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|194458120|gb|EDX46959.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197211759|gb|ACH49156.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197241855|gb|EDY24475.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205323528|gb|EDZ11367.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205332330|gb|EDZ19094.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 333

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        V+VN+    L     G+       + +G    +TP++ +RI + + NP W
Sbjct: 88  MLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +            +                G 
Sbjct: 148 TPTAGIRQRSL------------ERGITL---------PPVI--------------PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|239944015|ref|ZP_04695952.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           roseosporus NRRL 15998]
 gi|239990470|ref|ZP_04711134.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           roseosporus NRRL 11379]
 gi|291447483|ref|ZP_06586873.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces roseosporus NRRL
           15998]
 gi|291350430|gb|EFE77334.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces roseosporus NRRL
           15998]
          Length = 259

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 35/132 (26%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              L  G+S  +V++L+ R  ++G         +  AF    ++AV  FQ  +GL   G+
Sbjct: 53  SGTLREGSSGEAVRQLQIR--VAGYPGTGNQIAIDGAFGPATKAAVTRFQAAYGLAADGI 110

Query: 157 VDSSTL------------------EAMNV-----------PVDLRIRQLQVNLMRIKKLL 187
              +T                     +N                R   L V + +++  +
Sbjct: 111 AGPATFNKIYQLQDDDCTPVNFTYAELNRCNSDWSGGKVSAATARANAL-VTMWKLQA-M 168

Query: 188 EQKMGLRYVLVN 199
              MG R + VN
Sbjct: 169 RHAMGDRPITVN 180


>gi|226313688|ref|YP_002773582.1| spore cortex-lytic enzyme precursor [Brevibacillus brevis NBRC
           100599]
 gi|226096636|dbj|BAH45078.1| putative spore cortex-lytic enzyme precursor [Brevibacillus brevis
           NBRC 100599]
          Length = 215

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L    +  G+ +  V  L+ RL + G  D    L   + A    AV+ FQ  +GL   G
Sbjct: 26  SLAATQIQRGSVNGDVWDLQYRLQMLGYYD--DKLDGIYGANTTKAVRQFQKAYGLRIDG 83

Query: 156 MVDSSTLEAM 165
           +   +T   +
Sbjct: 84  ITGPNTWRVL 93


>gi|187777208|ref|ZP_02993681.1| hypothetical protein CLOSPO_00754 [Clostridium sporogenes ATCC
           15579]
 gi|187774136|gb|EDU37938.1| hypothetical protein CLOSPO_00754 [Clostridium sporogenes ATCC
           15579]
          Length = 232

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLH---------LGNSSVSVQRLRERLIISGDLDPS 127
             ++AI +   ++   G   L I P            G+    + +++ +L   G  +  
Sbjct: 6   YLKRAIIYVLALMIAYGSTTLYILPYTNATKAVAYYYGHRGDIISQVQRKLKAWGYYNG- 64

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            G+   F     +AV+ FQ ++GL   G++   TL A+ +
Sbjct: 65  -GVDGIFGHGTYTAVRSFQSKNGLTVDGIIGDKTLVALGI 103


>gi|289642455|ref|ZP_06474600.1| cell wall hydrolase/autolysin [Frankia symbiont of Datisca
           glomerata]
 gi|289507714|gb|EFD28668.1| cell wall hydrolase/autolysin [Frankia symbiont of Datisca
           glomerata]
          Length = 447

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           D       ++ FDA ++ AV+ FQ   GL   G+V   T  A+
Sbjct: 97  DAARELDAALEFDAALDRAVRAFQQSRGLSADGIVGPDTFRAL 139



 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 43/137 (31%), Gaps = 18/137 (13%)

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG-----GWPELPI 99
            +   D      AR D   + D  +     + +  +A    + + + G      +  L  
Sbjct: 82  RAGAPDTPMPAAARFDAARELDAALEFDAALDRAVRAFQQSRGLSADGIVGPDTFRALEE 141

Query: 100 RPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
               LG+               V  L+ERL   G           F    E+A++ FQ  
Sbjct: 142 ARRKLGDRLLFYSVNHPFIGDDVASLQERLSNMGF--DVGRTDGIFGPRTEAALRDFQYN 199

Query: 149 HGLDPSGMVDSSTLEAM 165
             L+P G     TL  +
Sbjct: 200 RALEPDGRCGPLTLREL 216


>gi|15802090|ref|NP_288112.1| hypothetical protein Z2706 [Escherichia coli O157:H7 EDL933]
 gi|12515680|gb|AAG56665.1|AE005391_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
          Length = 334

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 55/169 (32%), Gaps = 40/169 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                + ++VN+    L     G+   +   + +G    +TP++ +R+ + + NP W   
Sbjct: 91  PDAPRQGIIVNLAELRLYYYPPGENIXQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPT 150

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
             I Q+ +            +  I +                             G  N 
Sbjct: 151 AGIRQRSL------------ERGIKL-----------------------PPVVPAGPNNP 175

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 176 LGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|289768974|ref|ZP_06528352.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces lividans TK24]
 gi|289699173|gb|EFD66602.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces lividans TK24]
          Length = 229

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S   V +L+ R+               + A   +AVK FQ  +GL   G+   
Sbjct: 25  RTLSQGSSGSDVTQLQIRVAGWVTSGERLSYDGQYGARTAAAVKKFQAAYGLGADGVAGP 84

Query: 160 ST---LEAM 165
           +T   + A+
Sbjct: 85  ATFSKIYAL 93


>gi|256785081|ref|ZP_05523512.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces lividans TK24]
          Length = 222

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S   V +L+ R+               + A   +AVK FQ  +GL   G+   
Sbjct: 18  RTLSQGSSGSDVTQLQIRVAGWVTSGERLSYDGQYGARTAAAVKKFQAAYGLGADGVAGP 77

Query: 160 ST---LEAM 165
           +T   + A+
Sbjct: 78  ATFSKIYAL 86


>gi|23100366|ref|NP_693833.1| hypothetical protein OB2911 [Oceanobacillus iheyensis HTE831]
 gi|22778599|dbj|BAC14867.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 1115

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 2/72 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL LGNS   +  L+E L   G       +S  F  + E+ +K FQ  +GL  SG+ D  
Sbjct: 670 PLQLGNSHPDIITLKENLNHLGY--DGIAISDYFGNWTETRLKQFQEDNGLPVSGIADEI 727

Query: 161 TLEAMNVPVDLR 172
           TL A+   V+ R
Sbjct: 728 TLAAIEEAVENR 739



 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           E+ +A  +++ S   +         LG+   ++  ++E+L   G        +  F  + 
Sbjct: 240 ERTLAKLEELASTDVF--------ELGDRHNAIITIKEKLNAIGF--GGISETNYFGGWT 289

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           E+ VK FQ  +GL   G V  +T E +
Sbjct: 290 ETRVKQFQQYYGLSVDGKVGPATQETL 316



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 52/144 (36%), Gaps = 20/144 (13%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
            + L++K ++A   D I    Y     +       RV    +     ++ +    T+  +
Sbjct: 402 AIILLKKKLNAVGFDRISETDYFGGWTE------TRVRQFQEYYNLNVTGKADEATQNKL 455

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
                        E+   P   G        L+E+L   G       +S  +  + +S V
Sbjct: 456 D------------EVYNSPFQAGKRHEDTIELKEKLNRLGY--GHITVSTLYGNFTKSQV 501

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMN 166
           K FQ  +GL  +G+ D +T   +N
Sbjct: 502 KRFQREYGLVENGIADENTWIKLN 525



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +   P   G      + ++E+L   G       ++  F  Y+ES VK FQ   GL  +G
Sbjct: 179 SVYNSPFQNGKRHEDTKAIKEKLNSIGY--GPITVTTLFGNYMESQVKEFQRDQGLRVNG 236

Query: 156 MVDSSTLEAM 165
           + D  TL  +
Sbjct: 237 IADERTLAKL 246



 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +   P   G      + ++E+L   G       ++  F  Y+ES VK FQ   GL  +G
Sbjct: 318 SVYNSPFQNGERHEDTKAIKEKLNSIGY--GPITVTTLFGDYMESQVKEFQRDQGLRVNG 375

Query: 156 MVDSSTLEAM 165
           + D  TL  +
Sbjct: 376 IADGPTLAKL 385



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 14/144 (9%)

Query: 30  PIHASVLDEIINESYHSIVNDR----FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
               + LDE+ N  + +             L R+  G  +   +    T +Q ++    Y
Sbjct: 449 EATQNKLDEVYNSPFQAGKRHEDTIELKEKLNRLGYGHITVSTLYGNFTKSQVKRFQREY 508

Query: 86  ----QDILSRGGWPELPIR----PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
                 I     W +L          LG+    +  ++++L   G        +  +  +
Sbjct: 509 GLVENGIADENTWIKLNEAYYNASFQLGDRHEDIIEIKKQLNAIGF--GGISETNYYGGW 566

Query: 138 VESAVKLFQMRHGLDPSGMVDSST 161
            E+ VK FQ  + L  +G+VD +T
Sbjct: 567 TETRVKQFQKYYHLTVTGIVDHTT 590



 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +   P   G        ++E+L   G       +S  + ++ E+ V+ FQ  +GL  +G
Sbjct: 596 SVYNSPFQNGKRHDGTVEIKEKLNRIGF--GYITVSTLYGSFTETQVRKFQSHYGLLENG 653

Query: 156 MVDSSTLEAM 165
           + D  T+  +
Sbjct: 654 IADEVTIAKL 663



 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 16/150 (10%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPI----ISKETIAQTEKAIAF 84
            P     LD + N  + +      D    +  +      PI    +  + +    K    
Sbjct: 309 GPATQETLDSVYNSPFQNGERHE-DTKAIKEKLNSIGYGPITVTTLFGDYMESQVKEFQR 367

Query: 85  YQDILSRG--GWPEL-------PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
            Q +   G    P L             LG+   ++  L+++L   G        +  F 
Sbjct: 368 DQGLRVNGIADGPTLAKLEELASTDVFELGDRHSAIILLKKKLNAVGF--DRISETDYFG 425

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            + E+ V+ FQ  + L+ +G  D +T   +
Sbjct: 426 GWTETRVRQFQEYYNLNVTGKADEATQNKL 455



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           P   G+    +  ++E+L   G        +  F  + E+ V  FQ  + L  +G VD  
Sbjct: 115 PYEKGDRHEDLVEIKEKLNHIGF--DGITETDYFGNWTETRVTQFQTYYQLSITGKVDQK 172

Query: 161 TLEAM 165
           T+  +
Sbjct: 173 TINKL 177


>gi|225573657|ref|ZP_03782412.1| hypothetical protein RUMHYD_01851 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038950|gb|EEG49196.1| hypothetical protein RUMHYD_01851 [Blautia hydrogenotrophica DSM
           10507]
          Length = 330

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           ++P +  L  G+    V+ L+ +LI         G    F    E AV+ FQ  + L   
Sbjct: 177 QVPEKNFLSRGDQGEQVKNLQRQLISLSYSCGENGADGDFGKDTEKAVEAFQKEYNLTSD 236

Query: 155 GMVDSSTLEAM 165
           G     T++ +
Sbjct: 237 GAAGPETMKKL 247


>gi|315179130|gb|ADT86044.1| general secretion pathway protein A [Vibrio furnissii NCTC 11218]
          Length = 530

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W     + L  G    +V  L  +L     L   +     +D  V+  V++FQ    +  
Sbjct: 446 WQPSFYQTLRSGMRGEAVTLLDVKLSRL--LGEPERHVTEYDQEVKRKVEIFQRWQHMQV 503

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 504 DGIAGRQTLRQL 515


>gi|240169597|ref|ZP_04748256.1| putative toxin subunit [Mycobacterium kansasii ATCC 12478]
          Length = 3193

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
             +P R L L  ++  V  L+  L   G  ++ ++     F A   +AV  FQ   GL  
Sbjct: 252 KPIP-RALRLNATNKDVPVLQRTLAFLGHAVNETEFKDTRFGASTRAAVLAFQKSAGLPE 310

Query: 154 SGMVDSSTLEAMN 166
           +G VD  TL A+N
Sbjct: 311 TGHVDRGTLAALN 323



 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 110 SVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            V+ L + L   G  +D  +           +AVK+ Q R GLD +G  + ST++A+ V 
Sbjct: 26  RVELLHQALGTLGLPVDAGEVDEAKLGKTTSAAVKVLQERAGLDQTGKFNKSTVDALKVH 85

Query: 169 VDLRI 173
           V+ ++
Sbjct: 86  VEDQL 90


>gi|169334010|ref|ZP_02861203.1| hypothetical protein ANASTE_00402 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258727|gb|EDS72693.1| hypothetical protein ANASTE_00402 [Anaerofustis stercorihominis DSM
           17244]
          Length = 230

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G+ +  V+ ++E+L   G  D S  +   F A  E AVK FQ ++GL   G    STLE
Sbjct: 33  YGSPAAHVKPVQEKLKRWGYYDGS--VDGKFGAATEKAVKYFQRKNGLTQDGKAGKSTLE 90

Query: 164 AM 165
            M
Sbjct: 91  KM 92


>gi|56694927|ref|YP_164437.1| lysin [Bacillus phage BCJA1c]
 gi|52631354|gb|AAU85106.1| lysin [Bacillus phage BCJA1c]
          Length = 355

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V+ L+E+LI  G      G    F     +AV+ FQ   G+   G+    T
Sbjct: 215 LRHGERGPLVRSLQEQLIDKGFDLGRYGADGVFGDITRNAVRDFQRAAGIAVDGVPGPQT 274

Query: 162 LEAMNVPVDLRIRQLQVNLMRI 183
             A+      + + + V++ R+
Sbjct: 275 FRALKAYQPDKGQMVIVDVDRL 296


>gi|330466869|ref|YP_004404612.1| putative muramoyl-pentapeptide carboxypeptidase [Verrucosispora
           maris AB-18-032]
 gi|328809840|gb|AEB44012.1| putative muramoyl-pentapeptide carboxypeptidase [Verrucosispora
           maris AB-18-032]
          Length = 249

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           R L  G +   V++L+ R  +SG         L  A+     SAV  FQ  +GL   G+ 
Sbjct: 45  RTLSSGMTGEDVRQLQIR--VSGYPGYGAVLTLDGAYGPATRSAVIRFQQAYGLAADGVA 102

Query: 158 DSSTLEAM 165
            + T   +
Sbjct: 103 GAQTFNQI 110


>gi|134299797|ref|YP_001113293.1| cell wall hydrolase SleB [Desulfotomaculum reducens MI-1]
 gi|134052497|gb|ABO50468.1| cell wall hydrolase, SleB [Desulfotomaculum reducens MI-1]
          Length = 224

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L LG     VQ+L+  L   G    +      F     ++VK FQ R+GL   G+V  
Sbjct: 15  RTLKLGIQGYDVQQLQNNLNYLGY--KAGKSDGIFGWQTYNSVKQFQARNGLKVDGVVGR 72

Query: 160 STLEAM 165
           +T   M
Sbjct: 73  ATARTM 78


>gi|328910591|gb|AEB62187.1| bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens LL3]
          Length = 387

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 10/80 (12%)

Query: 96  ELPIRPLHLGN---SSVSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMR 148
            LP     + +      +V++++  L              G+  A+ A   +AVK FQ  
Sbjct: 306 SLPAGTFKVTSPLTRGEAVKQIQTALAALHYYPDKSAKNFGIDGAYGAKTANAVKRFQSM 365

Query: 149 HGLDPSGMVDSST---LEAM 165
           +GL   G+    T   +EA+
Sbjct: 366 YGLTADGIYGPKTKAKIEAL 385


>gi|295314812|gb|ADF97556.1| PlyM31 [uncultured phage]
          Length = 357

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L    G    F    E+AVK FQ  +GL   G+  + +   
Sbjct: 221 GDTGAAVKTLQSELKQAGFLLSVDG---IFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 277

Query: 165 MN 166
           +N
Sbjct: 278 LN 279


>gi|295314810|gb|ADF97555.1| PlyM30 [uncultured phage]
          Length = 338

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L    G    F    E+AVK FQ  +GL   G+  + +   
Sbjct: 202 GDTGAAVKTLQSELKQAGFLLSVDG---IFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 258

Query: 165 MN 166
           +N
Sbjct: 259 LN 260


>gi|295314772|gb|ADF97536.1| PlyM11 [uncultured phage]
          Length = 356

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L    G    F    E+AVK FQ  +GL   G+  + +   
Sbjct: 220 GDTGAAVKTLQSELKQAGFLLSVDG---IFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 276

Query: 165 MN 166
           +N
Sbjct: 277 LN 278


>gi|295314768|gb|ADF97534.1| PlyM9 [uncultured phage]
          Length = 343

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L    G    F    E+AVK FQ  +GL   G+  + +   
Sbjct: 221 GDTGAAVKTLQSELKQAGFLLSVDG---IFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 277

Query: 165 MN 166
           +N
Sbjct: 278 LN 279


>gi|295314756|gb|ADF97528.1| PlyM3 [uncultured phage]
          Length = 307

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L    G    F    E+AVK FQ  +GL   G+  + +   
Sbjct: 185 GDTGAAVKTLQSELKQAGFLLSVDG---IFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 241

Query: 165 MN 166
           +N
Sbjct: 242 LN 243


>gi|283779427|ref|YP_003370182.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pirellula
           staleyi DSM 6068]
 gi|283437880|gb|ADB16322.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pirellula
           staleyi DSM 6068]
          Length = 677

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +P + L +G+S   V  L+  L           +   +     +AVK FQ+ H L+ +
Sbjct: 301 PPVP-KTLRIGSSGDLVAALQRTLNAKNPEASRLTVDGDYGPATAAAVKKFQLEHMLNET 359

Query: 155 GMVDSSTLEAMNVPVDLR 172
           G +DS T +A+  P+  R
Sbjct: 360 GEMDSKTWQAL-GPLVDR 376


>gi|225572655|ref|ZP_03781410.1| hypothetical protein RUMHYD_00843 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039987|gb|EEG50233.1| hypothetical protein RUMHYD_00843 [Blautia hydrogenotrophica DSM
           10507]
          Length = 610

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 30/60 (50%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG++  +V+ +++ LI  G    + G   +F    ++AVK  Q ++GL   G     T
Sbjct: 387 LQLGDTGPAVKTMQQNLITLGFDVGAFGADGSFGQDTQAAVKQAQKKYGLTVDGFYGPDT 446



 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 27/62 (43%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V+ L+  LI  G    + G    F A  E+AVK FQ   GLD        T
Sbjct: 464 LCVGDQGGQVKELQSNLIYLGYDCGASGADGDFGADTEAAVKAFQKACGLDADSCAGPKT 523

Query: 162 LE 163
           L 
Sbjct: 524 LA 525


>gi|7159629|emb|CAB76364.1| matrix metalloproteinase [Cucumis sativus]
          Length = 320

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 6/72 (8%)

Query: 103 HLGNSSVSVQRLRERLIISGDL------DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           HLG++   + ++++ L   G +        +      FD  +ESA+K +Q  H L PSG+
Sbjct: 55  HLGDTKQGIHQIKKYLQRFGYITTNIQKHSNPIFDDTFDHILESALKTYQTNHNLAPSGI 114

Query: 157 VDSSTLEAMNVP 168
           +DS+T+  + +P
Sbjct: 115 LDSNTIAQIAMP 126


>gi|294498679|ref|YP_003562379.1| putative peptidoglycan binding domain-containing protein [Bacillus
           megaterium QM B1551]
 gi|294348616|gb|ADE68945.1| putative peptidoglycan binding domain protein [Bacillus megaterium
           QM B1551]
          Length = 188

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ S  V+ L++ L    D+  +  +   F    ++ VK FQ  H L P G+V   
Sbjct: 48  TLRKGSHSSYVKDLQQSLK---DVKYNTSVDGIFGTQTQNVVKEFQTDHSLSPDGIVGPL 104

Query: 161 TLEAMNVPVDLRIR 174
           T  A++     R +
Sbjct: 105 TWAALDENKVERKQ 118


>gi|21220813|ref|NP_626592.1| peptidodoglycan-binding membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|8246786|emb|CAB92821.1| putative peptidodoglycan-binding membrane protein [Streptomyces
           coelicolor A3(2)]
          Length = 452

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 12/72 (16%)

Query: 100 RPLHLGNSSVSVQRLRERL----IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS- 154
             L  G+    V  L++RL    +  GDLD        +D  VE AV+ +Q  + +    
Sbjct: 380 GTLSRGDQGPEVVELQQRLKEKWMYWGDLDGD------YDRQVEDAVRQYQWENRIRTDR 433

Query: 155 -GMVDSSTLEAM 165
            G+    T   +
Sbjct: 434 VGVYGPDTRRKL 445


>gi|313113432|ref|ZP_07799021.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624159|gb|EFQ07525.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 867

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 17/147 (11%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT--EKAIAFYQDIL 89
              +   + +   +  V+ +F +          +   + S   + +T   K    Y DI 
Sbjct: 526 WLKIARTVYSNLNNITVDGKFGSATTAAVKRFQTYFGLTSDGVVGRTTWNKLYEVYNDIA 585

Query: 90  SR--------GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYV 138
           ++        G +P +    L  G+S  +V+ L+  L +    +   P+ G+   F A  
Sbjct: 586 NKLLSSSLRPGEYPGV----LRKGSSGTAVRELQFYLYLMSAYESSIPAIGIDGQFGAST 641

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           E+AV+ +Q   GL   G+V  +T  ++
Sbjct: 642 EAAVRAYQRFAGLTVDGIVGRTTWNSL 668



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLF 145
           LS G W       L  G++  +V++L+  L      +   PS  +   +     + V+ F
Sbjct: 413 LSDGTWG---GTVLRTGSTGSAVEQLQFWLNTLAQYESSIPSLTVDGVYGTGTANTVRAF 469

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q ++GL   G+V   T   +
Sbjct: 470 QRKYGLTVDGVVGRDTWTEL 489



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P+  G+S  +V  L+ +L  I+ D        +   F A + + V+ FQ +  L   
Sbjct: 319 PGSPIRQGDSGTAVFTLQRQLNRITKDYPFLGLLTVDGVFGAKMAATVRAFQKQFNLTAD 378

Query: 155 GMVDSS 160
           G+V   
Sbjct: 379 GVVGRQ 384



 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 84  FYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVE 139
            ++ I S  G P   P   L  G S  +V+ ++  L I+  +  +     +   F +   
Sbjct: 492 QFRSIQSDNGTPNAYPGTALREGASGQNVRLVQFWLKIARTVYSNLNNITVDGKFGSATT 551

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +AVK FQ   GL   G+V  +T   +
Sbjct: 552 AAVKRFQTYFGLTSDGVVGRTTWNKL 577



 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 13/160 (8%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVL-DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS 71
               Y +L   ++     +    L D+  +E+  +  + +    L    +        + 
Sbjct: 702 AVLYYSLLLQRIAYYFTSVEKPPLSDQYTDETAVATRSAQELLGLPETGIADADTWTAVE 761

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL------RERLIISGDLD 125
             ++    +     + I   G  P  P R +  G+    V ++      R  L  +   +
Sbjct: 762 ALSLQLAAEMPNPDRSI---GHGPVYPGRAIGAGSVGPDVAQVETWLNGRSCLYCT---E 815

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                +  F     +AV+L Q R GL  +G VD  T  A+
Sbjct: 816 GYVTENRCFGPEETAAVRLAQQRAGLLVTGTVDRGTWAAL 855



 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 7/86 (8%)

Query: 98  PIRPLHLGNSSVSV---QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL +G+S  +V     L +R+           LS  +      A +  Q   GL  +
Sbjct: 690 PGAPLTVGSSGSAVLYYSLLLQRIAYYFTSVEKPPLSDQYTDETAVATRSAQELLGLPET 749

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNL 180
           G+ D+ T  A    V+    QL   +
Sbjct: 750 GIADADTWTA----VEALSLQLAAEM 771


>gi|300361594|ref|ZP_07057771.1| carboxy-terminal processing protease CtpA [Lactobacillus gasseri
           JV-V03]
 gi|300354213|gb|EFJ70084.1| carboxy-terminal processing protease CtpA [Lactobacillus gasseri
           JV-V03]
          Length = 482

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G L   K ++  FD   ++AV  FQ  H L   G+V+   
Sbjct: 393 LKKSMTGVDVATLQQYLTALGYLP--KHVTGVFDDETKNAVIKFQKEHNLTTDGIVNGQV 450

Query: 162 LEAMNVPVDLRIR 174
              + + V  +++
Sbjct: 451 QAQLYLAVAQKLQ 463


>gi|29654868|ref|NP_820560.1| LysM domain-containing protein [Coxiella burnetii RSA 493]
 gi|161831280|ref|YP_001597412.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii RSA 331]
 gi|29542137|gb|AAO91074.1| hypothetical exported protein [Coxiella burnetii RSA 493]
 gi|161763147|gb|ABX78789.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii RSA 331]
          Length = 314

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 61/177 (34%), Gaps = 44/177 (24%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGL-RSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +    +++N+ A  L     GK       V +GR +  TP+    I + + NP WV+P
Sbjct: 89  PPVPKEGIVINLAAMRLYYFPKGKNYFYTYPVGIGRFNWSTPLGKLHIIQKIKNPVWVVP 148

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI++                       E G  V                     G  N 
Sbjct: 149 DSILRY--------------------RQENGDPVPKMM---------------PSGPENP 173

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           +    +       TY +H T +P    +V R  ++GC+ +   +I  L   +  DTP
Sbjct: 174 LGYYALRLSQP--TYLIHGTNDPS---SVGRRSSAGCIHLYPEDIKALFGMVSVDTP 225


>gi|224584113|ref|YP_002637911.1| LysM domain protein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224468640|gb|ACN46470.1| putative LysM domain protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 333

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        V+VN+    L     G+       + +G    +TP++ +RI + + NP W
Sbjct: 88  MLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMGTRIGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +            +                G 
Sbjct: 148 TPTAGIRQRSL------------ERGITL---------PPVI--------------PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|157374224|ref|YP_001472824.1| peptidoglycan binding domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157316598|gb|ABV35696.1| peptidoglycan-binding domain 1 protein [Shewanella sediminis
           HAW-EB3]
          Length = 541

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 94  WPELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +P  +G  +    +Q L   L    +  P   L   FD+ +E  +K FQ  HGL
Sbjct: 448 WQAPSDQPREIGQGANPAQIQWLENSLAHIDNTVP--RLVNRFDSQLEEQLKRFQREHGL 505

Query: 152 DPSGMVDSSTLEAMN 166
               +  S TL  +N
Sbjct: 506 RADAIAGSQTLVQLN 520


>gi|256392367|ref|YP_003113931.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Catenulispora acidiphila DSM 44928]
 gi|256358593|gb|ACU72090.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Catenulispora acidiphila DSM 44928]
          Length = 375

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 4/113 (3%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSV 111
            +        G+     + + + +     AI      ++   W  L + P+  G+S  +V
Sbjct: 256 LNQGYTVPTSGVFDATTVAAVQDLQGAIGAIVASDGTVTDPTWEALGV-PIRQGDSGNAV 314

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           Q L+  LI  G    +   S  FD     AV+  Q  HGL+P+G VD+ T  A
Sbjct: 315 QALQYILINKG---AALTQSGDFDHDTHKAVQDMQRLHGLEPTGKVDTETWCA 364



 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 16/103 (15%)

Query: 75  IAQTEKAIAFYQDILSRG----GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
                +A+A    I         WP++        N+   V+ ++  L+  G   P+   
Sbjct: 215 FPTLRRAVAH--GIGQHTFPDRTWPDIYDS-----NAGPVVRVVQWLLLNQGYTVPT--- 264

Query: 131 SVAFDAYVESAVKLFQMRHG--LDPSGMVDSSTLEAMNVPVDL 171
           S  FDA   +AV+  Q   G  +   G V   T EA+ VP+  
Sbjct: 265 SGVFDATTVAAVQDLQGAIGAIVASDGTVTDPTWEALGVPIRQ 307


>gi|325924471|ref|ZP_08185993.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
            19865]
 gi|325545047|gb|EGD16379.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
            19865]
          Length = 1092

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 102  LHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L LG+    V+ L+ RL       P   +      +    E AV+ FQ   GL  +G+  
Sbjct: 948  LRLGDRGQEVEFLQYRLQQVDARGPNGQAVPQDGHYGPETEHAVRQFQQDQGLPATGVAG 1007

Query: 159  SSTLEAMNVPVDLRIRQLQ 177
                EA++     R   L+
Sbjct: 1008 PDLDEALSQAQHARREALK 1026


>gi|271964297|ref|YP_003338493.1| hypothetical protein Sros_2792 [Streptosporangium roseum DSM 43021]
 gi|270507472|gb|ACZ85750.1| hypothetical protein Sros_2792 [Streptosporangium roseum DSM 43021]
          Length = 264

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 17/143 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P + L +G     V+ L+ RL   G       +   +    ++AV  FQ  + + P+  V
Sbjct: 53  PGKTLKIGAKGAEVKVLQTRLKELGYAPG--KIDGRYGGATQAAVWAFQKVNDISPTSTV 110

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL-- 215
              T  A+  P             R  K+L        V +N+    +     G+V L  
Sbjct: 111 ARRTWNALEAP-------------RTPKVLVPNGKPTRVEMNLAKQVMVLYVAGQVKLIS 157

Query: 216 RSTVIVGRVDRQTPILHSRINRI 238
            ++   G    +T   + ++ R 
Sbjct: 158 HTSSGSGIPYCETANWNGKVQRF 180


>gi|119946260|ref|YP_943940.1| peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG protein
           [Psychromonas ingrahamii 37]
 gi|119864864|gb|ABM04341.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG protein
           [Psychromonas ingrahamii 37]
          Length = 322

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 73/224 (32%), Gaps = 53/224 (23%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + LL   +  + +++N+P   L     GK       + +GR+ R TP + + +   + +P
Sbjct: 105 RMLLP-DVSHKGIVINLPELRLYYFPKGKQEVHIFPIGIGRIGRSTPTMETTVRMKIKHP 163

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P +  + +               +                        +       
Sbjct: 164 SWT-PTTQSRAE---------------HFQ------------------ATGKHLPSVVKA 189

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           GK N +    ++    N  Y +H T +   F   +R  ++GC+R+ N  D+  WL +   
Sbjct: 190 GKDNPLGDYALQLAYGNYEYLIHGTNKD--FGIGMR-VSAGCIRL-NPDDI-SWLFQQVS 244

Query: 362 TWSRYHIEEV---VKTRKTTPVKLATEVPV--------HFVYIS 394
           T     I      + +       L    P+          +Y +
Sbjct: 245 TNESVRIINQPIKIASEPNGQKMLEVHSPISRSDDDTEFSLYWT 288


>gi|319646306|ref|ZP_08000536.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. BT1B_CT2]
 gi|317392056|gb|EFV72853.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. BT1B_CT2]
          Length = 294

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 21/134 (15%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK-AIAFYQDILSRGGWPELPIRP 101
             H+    ++            +  P          +K A+  Y           LP   
Sbjct: 169 EAHARGIAKYLGLSGGSSKQPATTAPKKEAPKKESAKKPAVKKY----------TLPTGI 218

Query: 102 LH---LGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                      +V++++E L            + G+   +     +AVK FQ+ HGL   
Sbjct: 219 YKYKSPMMKGTAVRQIQEALAALYFYPDKEAKNNGIDGYYGPKTANAVKRFQLMHGLSAD 278

Query: 155 GMVDSST---LEAM 165
           G+    T   +EA+
Sbjct: 279 GIYGPKTKAKIEAL 292


>gi|150392091|ref|YP_001322140.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149951953|gb|ABR50481.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 253

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ +  G+    V  ++ RL   G L+ +  L   +   +E A+  FQ  H L  S +++
Sbjct: 182 LQTIKPGDFGADVMEIQSRLRALGYLN-TDYLDGKYGPMMERALYEFQKDHNLPESAVIE 240

Query: 159 SSTLEAMNV 167
             T +A+ V
Sbjct: 241 WQTFQALGV 249


>gi|218249099|ref|YP_002374470.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8801]
 gi|257062185|ref|YP_003140073.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8802]
 gi|218169577|gb|ACK68314.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8801]
 gi|256592351|gb|ACV03238.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8802]
          Length = 194

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 52/171 (30%), Gaps = 52/171 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             +++N+    + A +N KV     V +G+   +TP  +  +  ++ NP W         
Sbjct: 69  TRLVLNLKQRKVYAYQNDKVLASYPVAIGKKGWETPKGNFTVTSLIVNPKW--------- 119

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--T 311
                  ++P                        W             PG  + +     
Sbjct: 120 -------KNP------------------------WTGKVS-------APGPNSPLGERWI 141

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
                 ++    H TP   +        + GCVR+RN     ++ L D  T
Sbjct: 142 GFATKGKDVIGFHGTPGEHVMGQ---AVSHGCVRMRNKDIKALFELVDKGT 189


>gi|153956184|ref|YP_001396949.1| spore cortex-lytic enzyme precursor [Clostridium kluyveri DSM 555]
 gi|219856509|ref|YP_002473631.1| hypothetical protein CKR_3166 [Clostridium kluyveri NBRC 12016]
 gi|146349042|gb|EDK35578.1| Spore cortex-lytic enzyme precursor [Clostridium kluyveri DSM 555]
 gi|219570233|dbj|BAH08217.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 230

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 4/75 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +     + G+    V +++ +L   G  + S  +   +     +AV+ FQ ++GL+  G
Sbjct: 35  AVKAIAYYYGSRGDVVIKIQTKLRDWGYYNGS--VDGIYGYQTYTAVRYFQSKNGLNVDG 92

Query: 156 MVDSSTLEAM--NVP 168
           +V  +TL A+  NV 
Sbjct: 93  VVGDATLSALAINVS 107


>gi|153208754|ref|ZP_01946992.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212212071|ref|YP_002303007.1| hypothetical protein CbuG_0434 [Coxiella burnetii CbuG_Q212]
 gi|212219291|ref|YP_002306078.1| hypothetical protein CbuK_1807 [Coxiella burnetii CbuK_Q154]
 gi|120575786|gb|EAX32410.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212010481|gb|ACJ17862.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212]
 gi|212013553|gb|ACJ20933.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154]
          Length = 314

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 61/177 (34%), Gaps = 44/177 (24%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGL-RSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +    +++N+ A  L     GK       V +GR +  TP+    I + + NP WV+P
Sbjct: 89  PPVPKEGIVINLAAMRLYYFPKGKNYFYTYPVGIGRFNWSTPLGKLHIIQKIKNPVWVVP 148

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI++                       E G  V                     G  N 
Sbjct: 149 DSILRY--------------------RQENGDPVPKMM---------------PSGPENP 173

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           +    +       TY +H T +P    +V R  ++GC+ +   +I  L   +  DTP
Sbjct: 174 LGYYALRLSQP--TYLIHGTNDPS---SVGRRSSAGCIHLYPEDIKALFGMVSVDTP 225


>gi|78045053|ref|YP_360576.1| putative spore cortex-lytic enzyme [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77997168|gb|ABB16067.1| putative spore cortex-lytic enzyme [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 226

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             +G+    V  +  +L+  G       +   FD   + AV  FQ + GL   G+V   T
Sbjct: 32  YKVGSYGSKVLEIERKLVSLGY--KVYKVDKYFDVSTKKAVMAFQKKEGLKVDGIVGPVT 89

Query: 162 LEAM 165
           ++ +
Sbjct: 90  MKRL 93


>gi|312881706|ref|ZP_07741483.1| general secretion pathway protein A [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370596|gb|EFP98071.1| general secretion pathway protein A [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 537

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 7/76 (9%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L LG     V  L + L  +  L      S  F+  + + V+ FQ   GL+  G+   
Sbjct: 455 RTLQLGMKGKDVISLDQSLSKA--LGKPISDSKEFNQQLLNKVREFQGWQGLNVDGIAGQ 512

Query: 160 STLEAMNVPVDLRIRQ 175
            TL  +      R+ Q
Sbjct: 513 QTLRHL-----ERLSQ 523


>gi|312126439|ref|YP_003991313.1| carboxyl-terminal protease [Caldicellulosiruptor hydrothermalis
           108]
 gi|311776458|gb|ADQ05944.1| carboxyl-terminal protease [Caldicellulosiruptor hydrothermalis
           108]
          Length = 472

 Score = 54.8 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +    G+  + V   ++RL   G L      +   D    +AVK FQ    L PSG++D
Sbjct: 381 TKKFKKGDMDLEVLAAQQRLFYLGYLS---NWTAKMDDSTVAAVKKFQKDTKLYPSGVLD 437

Query: 159 SSTLEAMN 166
            +T + +N
Sbjct: 438 ITTQKKLN 445


>gi|304439584|ref|ZP_07399489.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371963|gb|EFM25564.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 257

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A     +K FQ    +  +G+VD+ T + ++            N+ R++  ++      +
Sbjct: 39  AARIEGIKRFQAELNVPTTGVVDAMTKKVLHTE----------NI-RVRDYVKPPTNGNW 87

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           + VN+    L   +  +V  +  V VG     TP +  +I     NP W
Sbjct: 88  ITVNLINRILTMYKGNEVLYKFPVAVGASATPTPAVKGKIMNKHVNPAW 136


>gi|167908454|ref|ZP_02495659.1| bacteriophage-acquired protein [Burkholderia pseudomallei NCTC
           13177]
          Length = 270

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAM 165
              +
Sbjct: 61  YRVL 64


>gi|38234908|ref|NP_940675.1| putative hydrolase [Corynebacterium diphtheriae NCTC 13129]
 gi|38201173|emb|CAE50897.1| Putative hydrolase [Corynebacterium diphtheriae]
          Length = 402

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 12/79 (15%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK------------GLSVAFDAYVESAVKLFQ 146
              L +G+ S  +  +R  L   G L+ +                  FD  +  A++ FQ
Sbjct: 11  SGTLRVGDRSPRIAEVRTALTRLGLLEGTTKNLEQTKSDTFTDSETLFDEDLALALQGFQ 70

Query: 147 MRHGLDPSGMVDSSTLEAM 165
              G+  SG ++  TL+ +
Sbjct: 71  QARGIIASGEINEITLKLL 89



 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 47/125 (37%), Gaps = 18/125 (14%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGNS--- 107
           L +      +D   +  E +A   +     + I++ G   E+ ++ L      LG     
Sbjct: 43  LEQTKSDTFTDSETLFDEDLALALQGFQQARGIIASGEINEITLKLLREASYSLGARVLS 102

Query: 108 --------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                      V +L+ +L   G    +  +   F     +++  +Q+ +GL+P G+   
Sbjct: 103 FEPNNIFVGDDVVQLQHQLQELGFY--TDRVDGRFGELTYTSLVNYQLNYGLNPDGICGP 160

Query: 160 STLEA 164
            T+ A
Sbjct: 161 ETIRA 165


>gi|13470669|ref|NP_102238.1| hypothetical protein mll0441 [Mesorhizobium loti MAFF303099]
 gi|14021411|dbj|BAB48024.1| mll0441 [Mesorhizobium loti MAFF303099]
          Length = 308

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 2/57 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G    SV  L   L   G       L   F    E+AV  FQ  HGL   G   
Sbjct: 184 LTRGERGPSVAALVSNLAALGYYKG--KLDDVFGYGTEAAVLAFQRDHGLTADGYAG 238


>gi|153871860|ref|ZP_02000922.1| Peptidoglycan-binding domain 1 [Beggiatoa sp. PS]
 gi|152071675|gb|EDN69079.1| Peptidoglycan-binding domain 1 [Beggiatoa sp. PS]
          Length = 134

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P LP   + +G ++ +V  +R+ L  I G       LS  FD  ++  +  FQ +  L  
Sbjct: 51  PVLPPPVIKVGMTNDTVLWIRKHLDTIEGIRSELLTLSPRFDYPLKRRIIEFQRQQKLHA 110

Query: 154 SGMVDSSTLEAM 165
            G+V   T+ A+
Sbjct: 111 DGVVGEQTMLAL 122


>gi|256788031|ref|ZP_05526462.1| peptidodoglycan-binding membrane protein [Streptomyces lividans
           TK24]
 gi|289771919|ref|ZP_06531297.1| peptidoglycan-binding membrane protein [Streptomyces lividans TK24]
 gi|289702118|gb|EFD69547.1| peptidoglycan-binding membrane protein [Streptomyces lividans TK24]
          Length = 409

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 12/72 (16%)

Query: 100 RPLHLGNSSVSVQRLRERL----IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS- 154
             L  G+    V  L++RL    +  GDLD        +D  VE AV+ +Q  + +    
Sbjct: 337 GTLSRGDQGPEVVELQQRLKEKWMYWGDLDGD------YDRQVEDAVRQYQWENRIRTDR 390

Query: 155 -GMVDSSTLEAM 165
            G+    T   +
Sbjct: 391 VGVYGPDTRRKL 402


>gi|328471958|gb|EGF42835.1| general secretion pathway protein A [Vibrio parahaemolyticus 10329]
          Length = 539

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     +++ L + L  +  +  S   +  FD  ++  V+LFQ   G+  
Sbjct: 451 WQAPLKETLRLDMEGPAIEVLDQLLAKA--VSESPLETSIFDGALKERVELFQRWQGIGV 508

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ-VNLMR 182
            G+    TLE +   V      L  +N   
Sbjct: 509 DGIAGHRTLERLQQSVQPNAPTLASINKEE 538


>gi|167839687|ref|ZP_02466371.1| bacteriophage-acquired protein [Burkholderia thailandensis MSMB43]
          Length = 270

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAM 165
              +
Sbjct: 61  YRVL 64


>gi|153839922|ref|ZP_01992589.1| general secretion pathway protein A [Vibrio parahaemolyticus
           AQ3810]
 gi|149746554|gb|EDM57542.1| general secretion pathway protein A [Vibrio parahaemolyticus
           AQ3810]
          Length = 539

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     +++ L + L  +  +  S   +  FD  ++  V+LFQ   G+  
Sbjct: 451 WQAPLKETLRLDMEGPAIEVLDQLLAKA--VSESPLETSIFDGALKERVELFQRWQGIGV 508

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ-VNLMR 182
            G+    TLE +   V      L  +N   
Sbjct: 509 DGIAGHRTLERLQQSVQPNAPTLASINKEE 538


>gi|28897189|ref|NP_796794.1| putative general secretion pathway protein A [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|260361614|ref|ZP_05774641.1| general secretion pathway protein A [Vibrio parahaemolyticus K5030]
 gi|260878094|ref|ZP_05890449.1| general secretion pathway protein A [Vibrio parahaemolyticus
           AN-5034]
 gi|260895977|ref|ZP_05904473.1| general secretion pathway protein A [Vibrio parahaemolyticus
           Peru-466]
 gi|28805398|dbj|BAC58678.1| putative general secretion pathway protein A [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308086710|gb|EFO36405.1| general secretion pathway protein A [Vibrio parahaemolyticus
           Peru-466]
 gi|308089713|gb|EFO39408.1| general secretion pathway protein A [Vibrio parahaemolyticus
           AN-5034]
 gi|308111838|gb|EFO49378.1| general secretion pathway protein A [Vibrio parahaemolyticus K5030]
          Length = 539

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     +++ L + L  +  +  S   +  FD  ++  V+LFQ   G+  
Sbjct: 451 WQAPLKETLRLDMEGPAIEVLDQLLAKA--VSESPLETSIFDGALKERVELFQRWQGIGV 508

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ-VNLMR 182
            G+    TLE +   V      L  +N   
Sbjct: 509 DGIAGHRTLERLQQSVQPNAPTLASINKEE 538


>gi|254183943|ref|ZP_04890534.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei 1655]
 gi|184214475|gb|EDU11518.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei 1655]
          Length = 270

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAM 165
              +
Sbjct: 61  YRVL 64


>gi|331269554|ref|YP_004396046.1| glycosyl hydrolase, family 25 [Clostridium botulinum BKT015925]
 gi|329126104|gb|AEB76049.1| glycosyl hydrolase, family 25 [Clostridium botulinum BKT015925]
          Length = 323

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 26/63 (41%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + ++ERL+  G      G    F    E AVK  Q  +GL   G+V   T 
Sbjct: 258 RRGAKGNITKIIQERLLAKGYRIGIYGADGIFGPETERAVKNLQKNYGLQIDGIVGKETW 317

Query: 163 EAM 165
           +A+
Sbjct: 318 QAL 320


>gi|134288769|ref|YP_001111074.1| gp43, bacteriophage-acquired protein [Burkholderia phage phiE202]
 gi|167619956|ref|ZP_02388587.1| bacteriophage-acquired protein [Burkholderia thailandensis Bt4]
 gi|134131982|gb|ABO60730.1| gp43, bacteriophage-acquired protein [Burkholderia phage phiE202]
          Length = 270

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAM 165
              +
Sbjct: 61  YRVL 64


>gi|94676943|ref|YP_588889.1| hypothetical protein BCI_0448 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94220093|gb|ABF14252.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 315

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 67/215 (31%), Gaps = 63/215 (29%)

Query: 196 VLVNIPAASLEAVENGK---VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +++NI    L     G    V L   V +G + ++TP   + ++R    P W  P + I+
Sbjct: 105 IIINIAEMRLYYYPKGTNKVVVL--PVGIGELGQETPCWVTSVHRKKHLPSWT-PSNAIK 161

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           K+  A     P                                       G  N M    
Sbjct: 162 KEYKARGIIIPDVF----------------------------------PAGANNPMGLYA 187

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN----------IIDLDVWLLKD--- 359
           +   +      H T     F   +R  + GC+R+R+           + + V L+ +   
Sbjct: 188 LYIGNSYAI--HGTNAN--FGIGLR-ISHGCIRLRDNDLKYLFDHVPVGVRVELINEPVK 242

Query: 360 ---TPTWSRY-HIEEVVKTRKTTPVKLATEVPVHF 390
               P  +RY  + + + T           VP+H 
Sbjct: 243 ACIEPNGNRYLEVHDPLSTTAEQ-FNSHKPVPIHI 276


>gi|297617582|ref|YP_003702741.1| 3D domain protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297145419|gb|ADI02176.1| 3D domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 290

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 15/127 (11%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI-AQTEKAIAFYQDILSRGGWPELP 98
           +   Y    + +F     +  + +  +        +  +T +A+  YQ            
Sbjct: 59  LKGYYCGPADQKFGVKTQKAVLALQQENACRVDGIVGPETRRALDAYQ------------ 106

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G +   V RL+E L   G L         F      AV  FQ  + L+   +V 
Sbjct: 107 PRLLFEGCTGADVTRLQETLKERGYLTGDADG--KFGPETRKAVLAFQKANSLEADAIVG 164

Query: 159 SSTLEAM 165
             T +A+
Sbjct: 165 PLTRQAL 171



 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L++G     V RL+  L + G           F    + AV   Q  +     G+V  
Sbjct: 39  RNLYVGCEGEDVARLQNTLNLKGYYCGPA--DQKFGVKTQKAVLALQQENACRVDGIVGP 96

Query: 160 STLEAM 165
            T  A+
Sbjct: 97  ETRRAL 102


>gi|283785092|ref|YP_003364957.1| peptidoglycan-binding protein [Citrobacter rodentium ICC168]
 gi|282948546|emb|CBG88136.1| putative peptidoglycan-binding protein [Citrobacter rodentium
           ICC168]
          Length = 329

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        V+VN+    L     G+ +     + +G    +TP++ +RI + + NP W
Sbjct: 88  MLLPDAPREGVIVNLAELRLYYFPPGENIVQVYPIGIGLEGLETPVMETRIGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I ++ +                                               G 
Sbjct: 148 TPTAGIRKRSL-----------------------------------ERGVTLPAVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T +P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRFALRLAYGNGEYLIHGTSQP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|53722098|ref|YP_111083.1| bacteriophage-acquired protein [Burkholderia pseudomallei K96243]
 gi|134288699|ref|YP_001111195.1| gp45, bacteriophage-acquired protein [Burkholderia phage phiE12-2]
 gi|167821706|ref|ZP_02453386.1| bacteriophage-acquired protein [Burkholderia pseudomallei 91]
 gi|167914793|ref|ZP_02501884.1| bacteriophage-acquired protein [Burkholderia pseudomallei 112]
 gi|52212512|emb|CAH38538.1| putative bacteriophage-acquired protein [Burkholderia pseudomallei
           K96243]
 gi|134132084|gb|ABO60759.1| gp45, bacteriophage-acquired protein [Burkholderia phage phiE12-2]
          Length = 270

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAM 165
              +
Sbjct: 61  YRVL 64


>gi|332709805|ref|ZP_08429762.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332351403|gb|EGJ30986.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 390

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL  G     V+ L++RL   G    +      F +  ++AV  +Q   GL   G+V S 
Sbjct: 325 PLIEGAVGSEVEELQQRLQTQGFYAGATDGD--FGSRTKAAVIAYQKAKGLYADGIVGSI 382

Query: 161 TLEAMN 166
           T   +N
Sbjct: 383 TWSTLN 388



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++ + V+ L++ L   G       +   F      AV  FQ   GL+P+G+V S T
Sbjct: 193 LREGDTGLKVKELQQSLQTQGFSPG--PVDGIFGPATTKAVISFQKFEGLNPNGLVGSKT 250

Query: 162 LEAM 165
            +A+
Sbjct: 251 WDAL 254


>gi|254193147|ref|ZP_04899582.1| putative peptidoglycan binding domain [Burkholderia pseudomallei
           S13]
 gi|254196637|ref|ZP_04903061.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei S13]
 gi|254197135|ref|ZP_04903558.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei S13]
 gi|169649901|gb|EDS82594.1| putative peptidoglycan binding domain [Burkholderia pseudomallei
           S13]
 gi|169653380|gb|EDS86073.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei S13]
 gi|169653877|gb|EDS86570.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei S13]
          Length = 270

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAM 165
              +
Sbjct: 61  YRVL 64


>gi|302813804|ref|XP_002988587.1| hypothetical protein SELMODRAFT_128150 [Selaginella moellendorffii]
 gi|300143694|gb|EFJ10383.1| hypothetical protein SELMODRAFT_128150 [Selaginella moellendorffii]
          Length = 361

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 91  RGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMR 148
            G W +L  +   H G+S  ++Q+L+   +  G L  S     ++FD  +E+AV+L+Q  
Sbjct: 37  AGAWADLLSLVDAHKGDSKPAIQKLKSYFVDFGYLGNSTLTADLSFDDALEAAVRLYQQN 96

Query: 149 HGLDPSGMVDSSTLEAMNVP 168
             L  +G +DS+T+  +  P
Sbjct: 97  FRLPVTGNLDSATIAQLVTP 116


>gi|254230373|ref|ZP_04923757.1| general secretion pathway protein A [Vibrio sp. Ex25]
 gi|262392387|ref|YP_003284241.1| general secretion pathway protein A [Vibrio sp. Ex25]
 gi|151937111|gb|EDN55985.1| general secretion pathway protein A [Vibrio sp. Ex25]
 gi|262335981|gb|ACY49776.1| general secretion pathway protein A [Vibrio sp. Ex25]
          Length = 538

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     +++ L +RL+    +      +  FD  ++  V+LFQ   G+  
Sbjct: 450 WQAPLKETLRLDMEGPAIEVL-DRLLAE-AVSEPLLETSIFDGAMKERVELFQRWQGIGV 507

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ 177
            G+    TL+ +   V     QL 
Sbjct: 508 DGIAGKRTLDRLQQNVQPDAPQLA 531


>gi|227824953|ref|ZP_03989785.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226905452|gb|EEH91370.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 242

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           +        H G S   V  ++E+L++ G           +      A+K +Q   GL+ 
Sbjct: 30  FQSADAAAFHQGESGPEVAAIQEKLLMEGY--DIGIPDGVYGERTVDAIKKYQASMGLEV 87

Query: 154 SGMVDSSTLEAM 165
            G++  ST   +
Sbjct: 88  DGIIGDSTYMKL 99


>gi|32141264|ref|NP_733665.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces coelicolor
           A3(2)]
 gi|24430040|emb|CAD55354.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           coelicolor A3(2)]
          Length = 244

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G S   V +L+ R+               + A   +AVK FQ  +GL   G+   
Sbjct: 40  RTLSQGASGSDVTQLQIRVAGWVTSGERLSYDGQYGARTAAAVKKFQAAYGLGADGVAGP 99

Query: 160 ST---LEAM 165
           +T   + A+
Sbjct: 100 ATFSKIYAL 108


>gi|20807586|ref|NP_622757.1| sporulation protein and related proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|20516125|gb|AAM24361.1| sporulation protein and related proteins [Thermoanaerobacter
           tengcongensis MB4]
          Length = 780

 Score = 54.8 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G     V+ L+  L   G           F    ++AV  FQ  +GL   G+V 
Sbjct: 127 SRTLRYGMQGEDVKFLQSILNKLGF--DVGTPDGIFGFKTQNAVVQFQKANGLLADGIVG 184

Query: 159 SSTLEAM----NVPVDLR 172
            +T + +    N P   R
Sbjct: 185 PATQKVLLQKVNAPSPSR 202



 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           +S G    +  + L  G     V+ L++ L   G    +      F      AV  FQ  
Sbjct: 225 ISNGDGNAIFNKVLKYGMIGEEVKLLQQYLNKLGF--DAGVPDGIFGGKTRQAVINFQKS 282

Query: 149 HGLDPSGMVDSSTLEA----MNVPVDLR 172
             L+  G+V   T +A    +NV +  R
Sbjct: 283 ANLEADGIVGPMTWQALISRLNVTLPSR 310



 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V++L+E L   G    S   +  F     +A+  FQ    L P G+   ST
Sbjct: 29  LKYGMRSPEVRKLQENLNRLGYFVTSTP-TDYFGPATLNALIKFQKDSNLVPDGIYGPST 87

Query: 162 LEAM 165
            + +
Sbjct: 88  EKVL 91



 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           +P    R L  G     V+ L+  L      D    ++  +D    +AV+ FQ  + L+P
Sbjct: 328 FPTPFTRELKGGLQGDDVKLLQGMLSELKYYDG--DVTGTYDDVTSNAVRSFQQYYSLNP 385

Query: 154 SGMVDSSTLEAM 165
           +G+ D  TL+ +
Sbjct: 386 TGIADVDTLKKL 397


>gi|297624717|ref|YP_003706151.1| peptidoglycan-binding domain 1 protein [Truepera radiovictrix DSM
           17093]
 gi|297165897|gb|ADI15608.1| Peptidoglycan-binding domain 1 protein [Truepera radiovictrix DSM
           17093]
          Length = 336

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLI-ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W  L I  +  G+++ +V+ ++++L    G    +  +   F    E+AVK FQ   GL 
Sbjct: 108 WGAL-ITVVRRGDNNNAVRAVQDQLANRYGY---ALAVDGVFGPATEAAVKSFQASWGLA 163

Query: 153 PSGMVDSSTLEAM 165
             G+V  ST  A+
Sbjct: 164 QDGVVGPSTWNAL 176



 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP +       G++  +V  ++  L   G    +  +  +F +  ESAV+ FQ    L  
Sbjct: 48  WPTV-----RRGDAGRTVVTVQYLLRHHG---GNLSVDGSFGSATESAVRSFQSARNLTV 99

Query: 154 SGMVDSSTLEAM 165
            G+V  ST  A+
Sbjct: 100 DGVVGPSTWGAL 111


>gi|86743213|ref|YP_483613.1| cell wall hydrolase/autolysin [Frankia sp. CcI3]
 gi|86570075|gb|ABD13884.1| cell wall hydrolase/autolysin [Frankia sp. CcI3]
          Length = 438

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 41/123 (33%), Gaps = 19/123 (15%)

Query: 50  DRFD-----NFLARVDMGIDSDIPIISKETIAQTEKAIAFY--QDILSRGGWPELPIRPL 102
           DRFD        A       S   I+  +T    E+A      + +     +P +     
Sbjct: 99  DRFDRDLDNALRAFQQSRGLSADGILGPDTARALEEARHKLGDRLLYHSPAYPFV----- 153

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                   V  L+ERL   G           F    ESAV+ FQ   GLDP G     TL
Sbjct: 154 -----GDDVAALQERLFNMGF--DVGRTDGIFGPRTESAVRDFQRNRGLDPDGQCGPHTL 206

Query: 163 EAM 165
             +
Sbjct: 207 REL 209



 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +    V  +   L   G        +  FD  +++A++ FQ   GL   G++   T  A+
Sbjct: 75  SQGTRVPAVDGTLG--GVPAEPAEPADRFDRDLDNALRAFQQSRGLSADGILGPDTARAL 132


>gi|225016832|ref|ZP_03706024.1| hypothetical protein CLOSTMETH_00744 [Clostridium methylpentosum
           DSM 5476]
 gi|224950406|gb|EEG31615.1| hypothetical protein CLOSTMETH_00744 [Clostridium methylpentosum
           DSM 5476]
          Length = 226

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 55/139 (39%), Gaps = 22/139 (15%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++   V  ++++L   G       +   +    +SAV  FQ + GL   G+   +TL+ +
Sbjct: 42  STGNEVTAIQQKLKERGLYTG--NVDGIYGPNTQSAVIKFQKQQGLSADGIAGPATLKRL 99

Query: 166 NVPVDLR--IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            + +          VNL+  + +  +  G  Y               G+V +   VI+ R
Sbjct: 100 GITIGSTPSATTANVNLL-ARIISAEGRGESYT--------------GQVAI-GAVILNR 143

Query: 224 VDRQTPILHSRINRIMFNP 242
           ++   P     ++ +++ P
Sbjct: 144 IEH--PSFPDTLSGVIYQP 160


>gi|255019839|ref|ZP_05291915.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
 gi|254970768|gb|EET28254.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
          Length = 309

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 51/152 (33%), Gaps = 40/152 (26%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++++IPA  L       KV     V + R     P+  +RI   + NP W +P++I Q++
Sbjct: 64  IVIDIPARRLYYFPPEQKVVYTYPVGIFRPKWPDPLGSTRIIAKVKNPSWTVPKNI-QEE 122

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                   P Y                                    PG  N M    +E
Sbjct: 123 HAKAGEPIPAYF----------------------------------PPGPDNPMGELALE 148

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
               +  Y+H T +P      +R  + GC  V
Sbjct: 149 -TGWSQIYIHGTNKPW--GVGMR-VSHGCFHV 176


>gi|257056977|ref|YP_003134809.1| putative peptidoglycan-binding domain-containing protein
           [Saccharomonospora viridis DSM 43017]
 gi|256586849|gb|ACU97982.1| putative peptidoglycan-binding domain-containing protein
           [Saccharomonospora viridis DSM 43017]
          Length = 246

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 28/64 (43%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G +   V+ L+ R+        +  +   + A  E+AVK FQ  +GL   G+   
Sbjct: 40  RTLSRGATGSDVRELQIRVAGWVASGENLVIDGVYGAATEAAVKRFQSGYGLAADGVAGP 99

Query: 160 STLE 163
           +T  
Sbjct: 100 NTFN 103


>gi|229820604|ref|YP_002882130.1| SCP-like extracellular [Beutenbergia cavernae DSM 12333]
 gi|229566517|gb|ACQ80368.1| SCP-like extracellular [Beutenbergia cavernae DSM 12333]
          Length = 349

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           LP   L +G S   V+RL+  L   G       +  A+     + V  FQ + GL   G+
Sbjct: 187 LPPGWLGIGASGPDVERLQADLAALGH---DVAVDGAYGPRTSAGVSAFQQQAGLAVDGV 243

Query: 157 VDSSTLE 163
              +TLE
Sbjct: 244 AGPATLE 250


>gi|53717805|ref|YP_106791.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           pseudomallei K96243]
 gi|52208219|emb|CAH34150.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           pseudomallei K96243]
          Length = 270

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G    S  +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---SLDVSHLYDEQTERAVQTLQATAGLVVDGIAGPKT 60

Query: 162 LEAM 165
              +
Sbjct: 61  YRVL 64


>gi|167567988|ref|ZP_02360904.1| bacteriophage-acquired protein [Burkholderia oklahomensis EO147]
          Length = 270

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAM 165
            + +
Sbjct: 61  YKVL 64


>gi|119898071|ref|YP_933284.1| hypothetical protein azo1780 [Azoarcus sp. BH72]
 gi|119670484|emb|CAL94397.1| hypothetical protein azo1780 [Azoarcus sp. BH72]
          Length = 208

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK-----GLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           L LG++   V+ L++RL+ +  L P        +   F    + AV  +Q  HGL P G+
Sbjct: 5   LKLGSTGDLVRLLQQRLVEAEALPPEDVQGHSNIDGQFGRITQDAVIGYQTAHGLTPDGL 64

Query: 157 VDSST 161
           V   T
Sbjct: 65  VGHRT 69


>gi|317057187|ref|YP_004105654.1| spore cortex-lytic enzyme [Ruminococcus albus 7]
 gi|315449456|gb|ADU23020.1| spore cortex-lytic enzyme [Ruminococcus albus 7]
          Length = 225

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 42/94 (44%), Gaps = 3/94 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G+    V+ ++E+L   G       ++  +     +AVK FQ + G+  +G     TL+
Sbjct: 39  IGSYGNEVRAIQEKLKERGLFK--ANVTGYYGEITRNAVKAFQKQQGITQTGTAGPITLK 96

Query: 164 AMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYV 196
           A+ + +       + N+  + + +  +  G  YV
Sbjct: 97  ALGISIGTVPAATEANIDLLARIISAEARGEPYV 130


>gi|23097729|ref|NP_691195.1| cell wall associated protein [Oceanobacillus iheyensis HTE831]
 gi|22775953|dbj|BAC12230.1| cell wall associated protein (cell wall lytic activity)
           [Oceanobacillus iheyensis HTE831]
          Length = 276

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            +  +  G+ S +V+ L+E L   G    +  +   F    E AV+ +Q    L   G+V
Sbjct: 63  SVGLIQRGDVSSAVEDLQEELQDQGYY--TYNIDGIFGPITEEAVREYQADQDLQVDGIV 120

Query: 158 DSSTLEAMNV 167
             +T +A+ V
Sbjct: 121 GPNTKDALAV 130


>gi|255307414|ref|ZP_05351585.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile ATCC 43255]
          Length = 103

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + +  GNS   V+  +  L + G    + G+  +F +   +AV  FQ ++GL   G++
Sbjct: 30  TTKVIRKGNSGKEVKAAQIMLTLLGY---NVGIDSSFGSKTYNAVVSFQKKYGLSADGII 86

Query: 158 DSSTLEAM 165
             +T + +
Sbjct: 87  GPATWDKL 94


>gi|254385203|ref|ZP_05000535.1| lipoprotein [Streptomyces sp. Mg1]
 gi|194344080|gb|EDX25046.1| lipoprotein [Streptomyces sp. Mg1]
          Length = 292

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 8/128 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ S  V+ L+ RL     +  +   +  + +   +AVK FQ R+GL  SG VD+ T + 
Sbjct: 90  GDDSEQVRELQARLKQLKLMSVAP--TGFYGSKTTTAVKSFQSRNGLTASGSVDAETWKK 147

Query: 165 MNV----PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           +      P    +R   VN   +     + M  R + ++  + +L  + +GKV     V 
Sbjct: 148 IQGLTKKPTADELRPPTVN--EVDAPDPRCMTGRVMCISKESRTLAWMIDGKVISTMDVR 205

Query: 221 VGRVDRQT 228
            G  +  T
Sbjct: 206 FGSENTPT 213


>gi|126700003|ref|YP_001088900.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile 630]
 gi|115251440|emb|CAJ69273.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile]
          Length = 200

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + +  GNS   V+  +  L + G    + G+  +F +   +AV  FQ ++GL   G++
Sbjct: 127 TTKVIRKGNSGKEVKAAQIMLTLLGY---NVGIDSSFGSKTYNAVVSFQKKYGLSADGII 183

Query: 158 DSSTLEAM 165
             +T + +
Sbjct: 184 GPATWDKL 191


>gi|91792069|ref|YP_561720.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS217]
 gi|91714071|gb|ABE53997.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS217]
          Length = 304

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 53/175 (30%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     GK  +    + +G++ + TP    + + R   NP W     I +K
Sbjct: 98  IVINVAEMRLYYYPKGKNIVEVLPIGIGQIGKDTPEKWVTTVQRKRANPTWTPTPRI-RK 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           + +A                      EV                     G  N M    +
Sbjct: 157 EYLAK--------------------GEVLPAVW--------------PAGPDNPMGLFAL 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              +      H T     F   +R  + GC+R+R+       L    P  +R   
Sbjct: 183 YIGNLYAI--HGTNAT--FGIGLR-ISQGCIRLRDAD--IEHLFNSVPEGTRVEF 230


>gi|168178160|ref|ZP_02612824.1| LycA [Clostridium botulinum NCTC 2916]
 gi|21702563|gb|AAM75963.1| LycA [Clostridium botulinum]
 gi|182671439|gb|EDT83413.1| LycA [Clostridium botulinum NCTC 2916]
          Length = 316

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G+   F     +A+K FQ    L   G+V   T 
Sbjct: 249 KQGARGGITKVIQQMLISIGYPVGSHGVDGVFGDSTVTAIKAFQRDCHLVADGIVGKETW 308

Query: 163 EAM 165
           +A+
Sbjct: 309 KAL 311


>gi|296118595|ref|ZP_06837173.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295968494|gb|EFG81741.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 404

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 42/137 (30%), Gaps = 31/137 (22%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQMRH 149
           L +G+ S  V   R  L   G L    G                FD+ +   +K FQ   
Sbjct: 15  LQVGDRSARVAEARATLARLGMLSNYTGDVSDWKRQKFSEEDKHFDSELSDIIKAFQQSR 74

Query: 150 GLDPSGMVDSSTLEAM-----------------NVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           G+ PSG +D  TL  +                 N  V   + QLQ  L  +   + +  G
Sbjct: 75  GIIPSGNIDDLTLRELRQASYKLGNRVLSYQPNNELVGDDVSQLQKQLQELGFYMARIDG 134

Query: 193 LRYVLVNIP--AASLEA 207
                 +       L  
Sbjct: 135 HFGSFTHAALLEYQLNY 151



 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V +L+++L   G       +   F ++  +A+  +Q+ +GL   G+   +T+ A+++
Sbjct: 112 GDDVSQLQKQLQELGFY--MARIDGHFGSFTHAALLEYQLNYGLQQDGVCGPATIRALSL 169

Query: 168 PVDLRIRQLQVNL---MRIKKLLEQKMGLRYVL 197
                      N+    R++    +  G R V+
Sbjct: 170 LGRRITGGSAHNIQERERVRNAGPKLAGKRVVI 202


>gi|254425312|ref|ZP_05039030.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335]
 gi|196192801|gb|EDX87765.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335]
          Length = 189

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 50/162 (30%), Gaps = 52/162 (32%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +    ++++I    +   +  ++     V VG  +  TPI    + +++ NP W  P   
Sbjct: 60  LANNRIVLSISDRRVYLFDGNELVNSYPVAVGTPETPTPIGEFAVTQLVVNPVWQSP--- 116

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
                                        EV                    PG  +A+  
Sbjct: 117 --------------------------WTGEVR------------------SPGPNSALGL 132

Query: 311 TKIEFY-SRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
             I F  +   ++  H TP      ++    ++GCVR+ N  
Sbjct: 133 RWIGFTSNSEGSFGFHGTPTV---ESIGHAASNGCVRMHNAD 171


>gi|226948038|ref|YP_002803129.1| LycA [Clostridium botulinum A2 str. Kyoto]
 gi|40738374|gb|AAR89504.1| LycA [Clostridium botulinum A2 str. Kyoto]
 gi|226842291|gb|ACO84957.1| LycA [Clostridium botulinum A2 str. Kyoto]
          Length = 316

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T 
Sbjct: 249 KQGARGGITKVIQQMLISIGYPVGSHGADGVFGDSTVTAIKAFQRDCHLVADGIVGKETW 308

Query: 163 EAM 165
           +A+
Sbjct: 309 KAL 311


>gi|302558624|ref|ZP_07310966.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
 gi|302476242|gb|EFL39335.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
          Length = 223

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 23/74 (31%), Gaps = 8/74 (10%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           GGW  +       G     V  ++  +   G           +      AVK FQ   GL
Sbjct: 92  GGWSRID-----PGARGRRVAAIQYLMTQRGY---GLTADGYYGPVSAGAVKRFQAARGL 143

Query: 152 DPSGMVDSSTLEAM 165
              G V  +T   +
Sbjct: 144 VADGQVGPATWPHL 157



 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 9/85 (10%)

Query: 86  QDILSRGG-----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           + +++ G      WP L +  L  G++   V+ L+  L   G           F +   S
Sbjct: 141 RGLVADGQVGPATWPHL-VYTLRQGHAGHHVRALQTVLDKHG---AGLVADGGFGSVTAS 196

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAM 165
           AV+ +Q  + L   G+  + T  A+
Sbjct: 197 AVRAYQSVNRLVVDGVAGAVTWRAL 221


>gi|119490226|ref|ZP_01622739.1| prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase [Lyngbya
           sp. PCC 8106]
 gi|119454112|gb|EAW35265.1| prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase [Lyngbya
           sp. PCC 8106]
          Length = 367

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 7/81 (8%)

Query: 92  GGWPELPI-RPLHLGNS---SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W   P+ R L L         V +++  L   G L    G    FD   + A+K FQ 
Sbjct: 288 GIWCHFPVPRVLRLKQKFIEGSDVIQVQTALKKLGYLVDQNG---VFDKKTDDAIKQFQQ 344

Query: 148 RHGLDPSGMVDSSTLEAMNVP 168
              L   G+V  +T   + V 
Sbjct: 345 EKNLTVDGVVGPATWAKLLVS 365


>gi|159043497|ref|YP_001532291.1| peptidoglycan-binding domain 1 protein [Dinoroseobacter shibae DFL
           12]
 gi|157911257|gb|ABV92690.1| peptidoglycan-binding domain 1 protein [Dinoroseobacter shibae DFL
           12]
          Length = 260

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 51/154 (33%), Gaps = 16/154 (10%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS-------DIPIISKETIAQ 77
           S +      + +D  +        + R    L R+    ++         P         
Sbjct: 112 SAISNHSWGTAIDLTLEGKLDRRGDGRTQEGLLRIYKIFNAHGFFWGAAFPTEDAMHFEV 171

Query: 78  TEKAIAFYQDILSRGGWPELPI----RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           +E+ I   +     G             +  G+    V+ L++ L ++  L     +  A
Sbjct: 172 SEQLI---RQWADEGKLSSGSAVFDNGLIDFGDRGRIVEDLQQALNLA--LGLDLDVDGA 226

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           F     +AV  FQ  +GL   G+V  +T  A+ +
Sbjct: 227 FGPATRAAVMEFQRVNGLTVDGIVGPNTQAALGM 260


>gi|302390029|ref|YP_003825850.1| Peptidoglycan-binding domain 1 protein [Thermosediminibacter oceani
           DSM 16646]
 gi|302200657|gb|ADL08227.1| Peptidoglycan-binding domain 1 protein [Thermosediminibacter oceani
           DSM 16646]
          Length = 78

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G     V  L+ +L   G       +   F    E AV+  Q  + +   G+V 
Sbjct: 9   SRTLRRGMRGKDVAELQTKLQALGYY--MGPIDGIFGRLTEMAVRRLQRDNNIRVDGIVG 66

Query: 159 SSTLEAM 165
             T   +
Sbjct: 67  PQTYAIL 73


>gi|239989830|ref|ZP_04710494.1| hypothetical protein SrosN1_21180 [Streptomyces roseosporus NRRL
           11379]
 gi|291446846|ref|ZP_06586236.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291349793|gb|EFE76697.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 360

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V++L   L   G           +     +AVK +Q  H    +G V  
Sbjct: 121 RTLKPGDKGRDVEQLERNLAELGY--TGFTPDQEYTELTAAAVKRWQKSHDAKQTGKVGP 178

Query: 160 S--TLEAMNVPVDLRIRQL 176
              T      P  +RI+ +
Sbjct: 179 GDVTFA----PGKVRIKSV 193


>gi|325921073|ref|ZP_08182950.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
            19865]
 gi|325548461|gb|EGD19438.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
            19865]
          Length = 1267

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 102  LHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L LG+    V+ L+ RL       P   +      +    E AV+ FQ   GL  +G+  
Sbjct: 948  LRLGDRGREVEFLQYRLQQLDARGPNGQAVPQDGHYGPETEHAVRQFQQDQGLPATGIAG 1007

Query: 159  SSTLEAMNVPVDLRIRQLQV 178
                 A+        R++ +
Sbjct: 1008 QELDAAL--SQAQHARRVSL 1025


>gi|282897905|ref|ZP_06305900.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
 gi|281197049|gb|EFA71950.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
          Length = 201

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P++P   L  G+S ++++ L+  LI +G    +  +   F    E+A+K FQ +  L   
Sbjct: 133 PQMP--TLRFGDSGLAIRVLQRLLISNGY---NVRVDGVFGPLTETAIKAFQSQRDLSVD 187

Query: 155 GMVDSSTLEAM 165
           G+V  +T   +
Sbjct: 188 GIVGPNTWYQL 198


>gi|167464376|ref|ZP_02329465.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322383048|ref|ZP_08056876.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152817|gb|EFX45442.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 230

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P    RPL  G+S + VQ ++ RL  +G  +     +  F    E A+K F+  H L 
Sbjct: 156 GPPYEDPRPLAAGDSGIDVQLIQYRLKSAGYFNG--ICNGKFGPQTELALKRFEKDHDLP 213

Query: 153 PSGMVDSSTLEAM 165
             G++     EA+
Sbjct: 214 IDGVMGRQDYEAL 226


>gi|186682010|ref|YP_001865206.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186464462|gb|ACC80263.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 449

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G +  +V RL++RL   G L+ +   +  F      AV  FQ  + +  +G+V+  T
Sbjct: 114 LSQGKTGAAVTRLQQRLRQLGYLNANA--TGTFGPMTRDAVIKFQRNYRIAANGIVNRQT 171

Query: 162 LEAM 165
             A+
Sbjct: 172 WNAL 175



 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G++   V   +  L   G  +    +S  F +  ++AV  FQ  + +   G+V  +T 
Sbjct: 24  KIGSNGSEVTSSQRCLKKLGYFNG--PVSGKFASLTQNAVIKFQQANRIPADGVVGINTQ 81

Query: 163 EAM 165
           +A+
Sbjct: 82  QAL 84



 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+   +V  ++ERL   G    +      F    +  V  FQ    L+ +G VD  T
Sbjct: 262 LTLGDRGDNVALVQERLSQLGF--SNTNPDGFFSDSTKETVIAFQQYSRLNVTGNVDWQT 319

Query: 162 LEAM 165
            +A+
Sbjct: 320 WQAL 323



 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 9/133 (6%)

Query: 39  IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ----DILSRGGW 94
           ++++        R    L ++     +        T     K    Y+     I++R  W
Sbjct: 113 VLSQGKTGAAVTRLQQRLRQLGYLNANATGTFGPMTRDAVIKFQRNYRIAANGIVNRQTW 172

Query: 95  PELPIRPLHLGNSS---VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
             L         SS     V+ L+ RL   G  + S    +        AV  FQ  + L
Sbjct: 173 NALLGSSPTQTRSSLSTQQVRELQGRLQQLGYFNTSPTGKIG--PMTRDAVIKFQRNYRL 230

Query: 152 DPSGMVDSSTLEA 164
             +G+ ++  L+A
Sbjct: 231 PVNGIANAQVLDA 243


>gi|86148794|ref|ZP_01067062.1| putative general secretion pathway protein A [Vibrio sp. MED222]
 gi|85833413|gb|EAQ51603.1| putative general secretion pathway protein A [Vibrio sp. MED222]
          Length = 562

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 14/120 (11%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRE 116
             V++ ++  + ++ K T+ Q  +    Y  I     W +     L  G    +V  L  
Sbjct: 444 ESVELLVNEKLLVMPKRTLKQIWQG--DYVAI-----WKQPLRETLKEGYQGEAVALLDL 496

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
             ++S  L      S  FD  ++  ++ FQ   G+   G+    TL  +      R+ QL
Sbjct: 497 --LLSEVLGEDVSGSDVFDYELKMKIEAFQTWQGMSVDGIAGKRTLARL-----QRLAQL 549


>gi|308270260|emb|CBX26872.1| hypothetical protein N47_A09010 [uncultured Desulfobacterium sp.]
          Length = 440

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 72/205 (35%), Gaps = 46/205 (22%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGK---VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                + +++N+ A  L   +        L   V +G  +R TP+    + R M  P W 
Sbjct: 119 PDAPRKGIVINLAAMRLFQFKGNSNFLTVLTYPVGIGTSERPTPMGQMYVYRKMARPTWH 178

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P SI +       + DP                              P+FI    PG  
Sbjct: 179 VPASIAED---HRKKGDP-----------------------------LPSFIL---PGPE 203

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N +    +   S++   +H T +P          T+GC+R+    D+   L K TP  + 
Sbjct: 204 NPLGEYALYL-SKSGYLIHGTNKPSSIGLKA---TNGCIRL-YPEDI-KMLFKSTPVKTP 257

Query: 366 YHI--EEVVKTRKTTPVKLATEVPV 388
             I  +  +  ++   V L   VP+
Sbjct: 258 VSIVNQPYLIGQRNGLVYLEAHVPL 282


>gi|332711683|ref|ZP_08431614.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332349661|gb|EGJ29270.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 542

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            + LG+    V RL+  L   G     + +   + +   +AV  FQ   GL+  G+V   
Sbjct: 52  TVRLGSQGEVVTRLQTILQQLGYY--QQPVDGVYGSNTFAAVSTFQQALGLNADGIVGPI 109

Query: 161 TL 162
           T 
Sbjct: 110 TW 111


>gi|295704030|ref|YP_003597105.1| putative peptidoglycan binding domain-containing protein [Bacillus
           megaterium DSM 319]
 gi|294801689|gb|ADF38755.1| putative peptidoglycan binding domain protein [Bacillus megaterium
           DSM 319]
          Length = 188

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ S  V+ L++ L    D+  +  +   F    ++ VK FQ  H L P G+V   
Sbjct: 48  TLRKGSHSSYVRDLQQSLK---DVKYNTSVDGIFGTQTQNVVKEFQTDHSLSPDGIVGPL 104

Query: 161 TLEAMNVPVDLRIR 174
           T  A++     R +
Sbjct: 105 TWAALDENKVERKQ 118


>gi|294817680|ref|ZP_06776322.1| Peptidoglycan-binding domain 1 protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|326446616|ref|ZP_08221350.1| peptidoglycan binding domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294322495|gb|EFG04630.1| Peptidoglycan-binding domain 1 protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 345

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 45/142 (31%), Gaps = 25/142 (17%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP      L  G    +V  L+  L   G    +  +   F     + VK FQ    L  
Sbjct: 62  WPV-----LRAGQKGANVSALQHLLNFRG---QTLTVDGDFGPTTTAKVKAFQQSQALTD 113

Query: 154 SGMVDSSTLEAMNVPVDL-------RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
            G+V + T  A+   V         R  Q  +          Q + +  +     AA + 
Sbjct: 114 DGVVGADTWSALVTTVQSGSSGSAVRAAQTLLAAR------GQAVSVDGIFGADTAAKVR 167

Query: 207 AVENGKVGLRSTVIVGRVDRQT 228
           A + G        + G VD  T
Sbjct: 168 AFQQGA----GQAVTGVVDTTT 185



 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 4/98 (4%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
           P  + +  A  +        ++    W  L +  +  G+S  +V+  +  L   G    +
Sbjct: 96  PTTTAKVKAFQQSQALTDDGVVGADTWSAL-VTTVQSGSSGSAVRAAQTLLAARG---QA 151

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +   F A   + V+ FQ   G   +G+VD++T  A+
Sbjct: 152 VSVDGIFGADTAAKVRAFQQGAGQAVTGVVDTTTWLAL 189


>gi|328553931|gb|AEB24423.1| bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens TA208]
          Length = 385

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMR 148
            LP              +V++++  L              G+  A+ A    AV+ FQ+ 
Sbjct: 304 SLPAGTFKVTSPLTRGEAVKQIQTALAALRYYPDKNAKNFGIDGAYGAKTAGAVRRFQLM 363

Query: 149 HGLDPSGMVDSSTLEAM 165
           +GL   G+    T   +
Sbjct: 364 NGLKADGIYGPKTKTKL 380


>gi|85859402|ref|YP_461604.1| erfK/srfK family protein [Syntrophus aciditrophicus SB]
 gi|85722493|gb|ABC77436.1| erfK/srfK family protein [Syntrophus aciditrophicus SB]
          Length = 445

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 44/162 (27%)

Query: 189 QKMGLRYVLVNIPAASLEAVE-NGK--VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                + +++N+ A  L   + +GK        V +G  +R TP+    + R    P W 
Sbjct: 126 PDAPRKGIVINLAAMRLFQFKGDGKFLTVSTYPVGIGSEERPTPMGQMYVQRKTARPTWH 185

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P SI                +D+       K  ++   +V               PG  
Sbjct: 186 VPASIA---------------EDH------RKKGDILPAKV--------------PPGPD 210

Query: 306 NAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
           N +    +   + +  Y +H T +P          T+GC+R+
Sbjct: 211 NPLGEYALYLSNPS--YLIHGTNKPASIGLNA---TNGCIRL 247


>gi|302207202|gb|ADL11544.1| N-Acetymuramyl-L-Alanine Amidase [Corynebacterium
           pseudotuberculosis C231]
          Length = 398

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 24/174 (13%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL- 102
              +V D  D  + +      +D      E +A+  K +   + I++ G   E+ +R L 
Sbjct: 28  RLGLVPDS-DKEIKQSKGQTFTDPETYFDEDLAEVIKGMQQARGIIASGEINEVTLRALR 86

Query: 103 ----HLGNS-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
                LG                V +L+ +L   G    +  +   F      A+  +Q+
Sbjct: 87  EASYKLGARVLSFEPNNIFVGDDVVQLQTQLQELGFY--TDRVDGRFGENTYKALLSYQV 144

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIR----QLQVNLMRIKKLLEQKMGLRYVL 197
            +GL   G+    T+ A    +  RI     Q      R++       G R V+
Sbjct: 145 NYGLKSDGVCGPETIRAFGR-LGRRITGGSPQALRERERVRDAGPMLAGKRVVI 197



 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 12/76 (15%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK------------GLSVAFDAYVESAVKLFQMRH 149
           L +G+ S  V  +R  L   G +  S                  FD  +   +K  Q   
Sbjct: 10  LRVGDHSPRVAEVRTALTRLGLVPDSDKEIKQSKGQTFTDPETYFDEDLAEVIKGMQQAR 69

Query: 150 GLDPSGMVDSSTLEAM 165
           G+  SG ++  TL A+
Sbjct: 70  GIIASGEINEVTLRAL 85


>gi|52082056|ref|YP_080847.1| peptidase S41A, C-terminal protease [Bacillus licheniformis ATCC
           14580]
 gi|52787445|ref|YP_093274.1| YvjB [Bacillus licheniformis ATCC 14580]
 gi|319647922|ref|ZP_08002140.1| YvjB protein [Bacillus sp. BT1B_CT2]
 gi|52005267|gb|AAU25209.1| Peptidase S41A, C-terminal protease [Bacillus licheniformis ATCC
           14580]
 gi|52349947|gb|AAU42581.1| YvjB [Bacillus licheniformis ATCC 14580]
 gi|317390263|gb|EFV71072.1| YvjB protein [Bacillus sp. BT1B_CT2]
          Length = 479

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 57/163 (34%), Gaps = 30/163 (18%)

Query: 38  EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA-------IAFYQDILS 90
            +I +   +  ++     L   +       P   K T+ Q           +  Y+ +  
Sbjct: 298 SVITDKGSASASEILAGALKEAEGYDVVGDPSFGKGTVQQAVPMGDGSNIKLTLYKWLTP 357

Query: 91  RGGW-------PELPI--------------RPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           +G W       P +P+               PL    ++  ++R +  L   G +   + 
Sbjct: 358 KGNWIHKQGIQPTVPVTQPAYFSAGPLQLKEPLKPDMNNNEIKRAQFLLKGLGFVPGRED 417

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
               ++   + AV  FQ  + L  +G++D  T   MN+ ++ +
Sbjct: 418 G--YYNESTKKAVMAFQAANKLKQTGIIDQKTANTMNLRIEEK 458


>gi|329934815|ref|ZP_08284856.1| peptidoglycan-binding membrane protein [Streptomyces
           griseoaurantiacus M045]
 gi|329305637|gb|EGG49493.1| peptidoglycan-binding membrane protein [Streptomyces
           griseoaurantiacus M045]
          Length = 391

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 12/70 (17%)

Query: 102 LHLGNSSVSVQ----RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--G 155
           L  G+    V+    RLR+RL   G       +   +D  VE+AV  +Q   G+     G
Sbjct: 321 LRRGDDGPEVEELQRRLRQRLFYLG------TVDGTYDGDVETAVAAYQSARGITDDPRG 374

Query: 156 MVDSSTLEAM 165
           +   +T   +
Sbjct: 375 VYGEATRARL 384


>gi|304393047|ref|ZP_07374976.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303294812|gb|EFL89183.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 182

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V+RL+E+L +  D D        F    + AV  FQ  +GL   G+    T
Sbjct: 4   LKKGMKGAPVKRLQEKLGVGADGD--------FGPGTQKAVMDFQKANGLSVDGIAGPDT 55

Query: 162 LEAM 165
             AM
Sbjct: 56  FTAM 59



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V++L+  L  S D          F +  + AV  +Q  +GL   GM   ST
Sbjct: 67  LRVGSRGEQVKKLQAALGASAD--------GIFGSGTKQAVMDYQKANGLAVDGMAGPST 118

Query: 162 LEAM 165
           L  M
Sbjct: 119 LATM 122


>gi|295104692|emb|CBL02236.1| Putative peptidoglycan-binding domain-containing protein
           [Faecalibacterium prausnitzii SL3/3]
          Length = 870

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 6/80 (7%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLF 145
           LS G W       L  G S  +V++++  L      D   PS  +   +     +AV+ F
Sbjct: 413 LSNGTW---NGTVLSTGASGSAVEQVQFWLNTLAQYDSAIPSVTVDGVYGTATANAVRAF 469

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q ++GL   G+V  +T + +
Sbjct: 470 QRKYGLTVDGIVGQTTWKEL 489



 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 21/159 (13%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT--EKAIAFYQDIL 89
              +   +        V+ +F    A           + +   + +T  +K    Y DI 
Sbjct: 526 WLKIARTVYTSLESVTVDGKFGAGTAAAVRRFQRYFGLTADGVVGRTTWQKLYEVYNDIA 585

Query: 90  SR--------GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYV 138
           +R        G +P +    L  G++   V+ L+  L +    +   P   +   F A  
Sbjct: 586 NRLLSSSLRPGEYPGV----LRSGSTGTPVRELQFYLYLMSAYESSIPPVSIDGKFGADT 641

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           E AV+ +Q   GL   G+V  +T  ++      R  QL+
Sbjct: 642 ERAVRAYQQFAGLTVDGVVGRTTWNSL----YGRASQLR 676



 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL  G+   +V  L+ +L  I+ D        +   F + + + V+ FQ +  L   
Sbjct: 319 PGTPLRQGSRGTAVFTLQRQLNRIAKDYPFLGKLTVDGVFGSRMAATVRAFQKQFNLTAD 378

Query: 155 GMVDSSTLE 163
           G+V   T  
Sbjct: 379 GVVGRQTWY 387



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 7/73 (9%)

Query: 98  PIRPLHLGNSSVSVQRL-----RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P  PL  G S  +V+ +       R + +     S  +   F A   +AV+ FQ   GL 
Sbjct: 507 PGTPLREGASGQNVRLVQFWLKIARTVYTSL--ESVTVDGKFGAGTAAAVRRFQRYFGLT 564

Query: 153 PSGMVDSSTLEAM 165
             G+V  +T + +
Sbjct: 565 ADGVVGRTTWQKL 577


>gi|300859519|ref|YP_003784502.1| putative hydrolase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686973|gb|ADK29895.1| putative hydrolase [Corynebacterium pseudotuberculosis FRC41]
 gi|302331763|gb|ADL21957.1| N-Acetymuramyl-L-Alanine Amidase [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277455|gb|ADO27354.1| N-Acetymuramyl-L-Alanine Amidase [Corynebacterium
           pseudotuberculosis I19]
          Length = 393

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 24/174 (13%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL- 102
              +V D  D  + +      +D      E +A+  K +   + I++ G   E+ +R L 
Sbjct: 23  RLGLVPDS-DKEIKQSKGQTFTDPETYFDEDLAEVIKGMQQARGIIASGEINEVTLRALR 81

Query: 103 ----HLGNS-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
                LG                V +L+ +L   G    +  +   F      A+  +Q+
Sbjct: 82  EASYKLGARVLSFEPNNIFVGDDVVQLQTQLQELGFY--TDRVDGRFGENTYKALLSYQV 139

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIR----QLQVNLMRIKKLLEQKMGLRYVL 197
            +GL   G+    T+ A    +  RI     Q      R++       G R V+
Sbjct: 140 NYGLKSDGVCGPETIRAFGR-LGRRITGGSPQALRERERVRDAGPMLAGKRVVI 192



 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 12/76 (15%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK------------GLSVAFDAYVESAVKLFQMRH 149
           L +G+ S  V  +R  L   G +  S                  FD  +   +K  Q   
Sbjct: 5   LRVGDHSPRVAEVRTALTRLGLVPDSDKEIKQSKGQTFTDPETYFDEDLAEVIKGMQQAR 64

Query: 150 GLDPSGMVDSSTLEAM 165
           G+  SG ++  TL A+
Sbjct: 65  GIIASGEINEVTLRAL 80


>gi|326778411|ref|ZP_08237676.1| Peptidase M23 [Streptomyces cf. griseus XylebKG-1]
 gi|326658744|gb|EGE43590.1| Peptidase M23 [Streptomyces cf. griseus XylebKG-1]
          Length = 340

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 24/109 (22%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + +   GGW  +       G S  +V  ++  +   G       +  ++ +    AVK F
Sbjct: 203 RGVDLSGGWSRID-----PGASGATVVVIQHLMNQRGH---GLAVDGSYGSLSVGAVKRF 254

Query: 146 QMRHGLDPSGMVDSST----------------LEAMNVPVDLRIRQLQV 178
           Q   GL   G V  +T                + A+   ++ R  +L V
Sbjct: 255 QRSAGLAADGQVGPATWPVLVYTLRQGASGSPVRALQTALNRRGARLAV 303



 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 12/93 (12%)

Query: 81  AIAFYQD---ILSRGG-----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           A+  +Q    + + G      WP L +  L  G S   V+ L+  L   G       +  
Sbjct: 250 AVKRFQRSAGLAADGQVGPATWPVL-VYTLRQGASGSPVRALQTALNRRG---ARLAVDG 305

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            F +   SAV+ +Q  + L   G     T  A+
Sbjct: 306 GFGSVTTSAVRAYQSGNRLVTDGEAGPVTWRAL 338


>gi|239943377|ref|ZP_04695314.1| hypothetical protein SrosN15_20443 [Streptomyces roseosporus NRRL
           15998]
          Length = 354

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V++L   L   G           +     +AVK +Q  H    +G V  
Sbjct: 115 RTLKPGDKGRDVEQLERNLAELGY--TGFTPDQEYTELTAAAVKRWQKSHDAKQTGKVGP 172

Query: 160 S--TLEAMNVPVDLRIRQL 176
              T      P  +RI+ +
Sbjct: 173 GDVTFA----PGKVRIKSV 187


>gi|254413016|ref|ZP_05026788.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196180180|gb|EDX75172.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 417

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL +G+   +VQ L+ RL   G  +        +      AV  FQ    L+  G+V  +
Sbjct: 37  PLQVGSRGETVQALQTRLKKLGYYEG--DTDGVYGDTTRLAVIEFQESIDLNADGVVGLT 94

Query: 161 TLEAMNVPVDL 171
           T   +      
Sbjct: 95  TWTKLQAAAAE 105


>gi|320197861|gb|EFW72469.1| L,D-transpeptidase YnhG [Escherichia coli EC4100B]
          Length = 334

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSVP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|186684767|ref|YP_001867963.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186467219|gb|ACC83020.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 380

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 96  ELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            +   P  L  G+    VQRL+ +L   G  +    +   ++   E AV  FQ   GL  
Sbjct: 44  TVTASPAVLRYGSRKSDVQRLQTQLKQLGYYNGV--VDGQYNPSTEIAVAEFQKAKGLKV 101

Query: 154 SGMVDSSTLEAM 165
            G+   +T   +
Sbjct: 102 DGLAGLATRRRL 113


>gi|209523125|ref|ZP_03271681.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209496276|gb|EDZ96575.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 286

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 19/107 (17%)

Query: 76  AQTEKAIAFYQ--------DILSRGGWPELPIRP---------LHLGNSSVSVQRLRERL 118
            +TE+++  +Q         ++ R  W  L   P         +  G+    V+ L+ RL
Sbjct: 177 PRTERSLIQFQLAKGLRPTGVVDRSTWQALSKDPHQQTIAETLIKQGDRGSKVRTLQTRL 236

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            ++G       +   F     SAV  FQ+  GL+ +G+VD  T + +
Sbjct: 237 ELTG--HDPGPVDGIFGPKTLSAVSDFQLAMGLEATGVVDEKTWKVL 281



 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G     V  L++RL + G       +   F    E ++  FQ+  GL P+G+VD S
Sbjct: 144 TLARGTEGAQVAGLQQRLEVHGF--SVGRIDSLFGPRTERSLIQFQLAKGLRPTGVVDRS 201

Query: 161 TLEAMNVPV 169
           T +A++   
Sbjct: 202 TWQALSKDP 210


>gi|292490724|ref|YP_003526163.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus halophilus Nc4]
 gi|291579319|gb|ADE13776.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus halophilus Nc4]
          Length = 322

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 58/205 (28%), Gaps = 50/205 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-----VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             R +++N+    L      +     V +   + +GR    TP+  + +     NP W+ 
Sbjct: 103 PRRGIVINLAEMRLYYFPESQPGQPGVVVTHPIGIGREGWSTPLGKTSVISKKKNPTWIP 162

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI  +                                   +            PG  N
Sbjct: 163 PESIRAE-----------------------------------HEANGDPLPKVVPPGSDN 187

Query: 307 AMAST--KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            +     ++          H T  P      +R  + GC+R+    D+     +     S
Sbjct: 188 PLGKFALRLGMP-GYLI--HGTNRPW--GVGMR-VSHGCIRL-YPEDIASLFAQVKVGAS 240

Query: 365 RYHIEEVVKTR-KTTPVKLATEVPV 388
              + +  K   K   + L   VP+
Sbjct: 241 VNIVYQPFKAGIKDAVLYLEAHVPL 265


>gi|87302385|ref|ZP_01085210.1| Putative peptidoglycan binding domain 1 [Synechococcus sp. WH 5701]
 gi|87283310|gb|EAQ75266.1| Putative peptidoglycan binding domain 1 [Synechococcus sp. WH 5701]
          Length = 586

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+S   V  L+  L  +G    +   S  F    E+AV  FQ   GL   G+    T
Sbjct: 3   LRRGDSGDRVSSLQTSLKKAGFDPGAIDGS--FGPGTEAAVIAFQKSEGLFADGIAGVET 60

Query: 162 LEAM 165
           L A+
Sbjct: 61  LGAL 64



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L  G  S  V RL+  L  +  L P+       F    E  V  FQ   G+   G+   +
Sbjct: 511 LTRGMMSTEVGRLQLMLRKALSLTPADLPADSQFGPNTERRVSEFQKAKGIPADGIAGPA 570

Query: 161 TLEAM 165
           T++A+
Sbjct: 571 TIKAL 575


>gi|87303205|ref|ZP_01086003.1| putative bacteriophage lysozyme [Synechococcus sp. WH 5701]
 gi|87282372|gb|EAQ74332.1| putative bacteriophage lysozyme [Synechococcus sp. WH 5701]
          Length = 171

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G    SV +L+  L + G+   S  +   F  + E AVK FQ + GL   G+V   T
Sbjct: 107 LVVGEKGESVVKLQTSLNLHGE---SIQIDGIFGPHTEDAVKRFQAKSGLVSDGIVGPRT 163

Query: 162 LEAM 165
            E +
Sbjct: 164 WEKL 167


>gi|325289079|ref|YP_004265260.1| gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324964480|gb|ADY55259.1| gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 424

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V  ++  L   G       +   F    E AV+ FQ   GL   G+V   T
Sbjct: 2   LKVGLRGNDVAEVQALLKQRGF--DPGPVDGIFGTKTEQAVRRFQNARGLSADGIVGPLT 59

Query: 162 LEAM 165
            +A+
Sbjct: 60  YQAL 63


>gi|307328741|ref|ZP_07607913.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306885690|gb|EFN16704.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 350

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 95  PELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P  P  P  L  G+S   V  L++RL        +      +D  V   V  +Q +H + 
Sbjct: 271 PPGPTGPPALREGDSGPEVAELQKRLSQLLLYIGAADGD--YDGGVRRVVSSYQDQHDIT 328

Query: 153 --PSGMVDSSTLEAM 165
             P G+   +T   +
Sbjct: 329 GDPDGVYGENTRRDL 343


>gi|307824556|ref|ZP_07654781.1| Peptidoglycan-binding domain 1 protein [Methylobacter tundripaludum
           SV96]
 gi|307734540|gb|EFO05392.1| Peptidoglycan-binding domain 1 protein [Methylobacter tundripaludum
           SV96]
          Length = 553

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 7/81 (8%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + +    +S SV  LR  L        +      +D  + + V  FQ +H L   
Sbjct: 467 PTPDGKVIRPRETSESVLWLRHLLNSIDRKTEAVEQPRFYDDRLVARVMDFQHQHQLPED 526

Query: 155 GMVDSSTL-------EAMNVP 168
           G V   T+       +A+N+P
Sbjct: 527 GKVGEKTMFHLKNIAQALNLP 547


>gi|303240113|ref|ZP_07326634.1| spore cortex-lytic enzyme [Acetivibrio cellulolyticus CD2]
 gi|302592382|gb|EFL62109.1| spore cortex-lytic enzyme [Acetivibrio cellulolyticus CD2]
          Length = 231

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G  +  V ++++RL   G  D S  +S  +D     AV+ FQM + L  +G+ +
Sbjct: 32  AEKLAPGMENDDVMKVQQRLKNWGYYDGS--ISGNYDLNTFLAVRDFQMTYKLPANGIAE 89

Query: 159 SSTLEAMNVP 168
             TLE+M + 
Sbjct: 90  EKTLESMGLT 99


>gi|323169990|gb|EFZ55646.1| lysM domain protein [Escherichia coli LT-68]
          Length = 339

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 45/177 (25%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVG-----RVDRQTPILHSRINRIM 239
           LL      + ++VN+    L     G+ +     + +G         +TP++ +R+ + +
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPGLETPVMETRVGQKI 147

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W     I Q+ +            +  I +                          
Sbjct: 148 PNPTWTPTAGIRQRSL------------ERGIKL-----------------------PPV 172

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
              G  N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 VPAGPNNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 226


>gi|163751936|ref|ZP_02159148.1| general secretion pathway protein a [Shewanella benthica KT99]
 gi|161328152|gb|EDP99318.1| general secretion pathway protein a [Shewanella benthica KT99]
          Length = 542

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 94  WPELPIRPLHLGN--SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +P  +G   +S  +Q L   L        +  L   FDA +E  +  FQ  HGL
Sbjct: 453 WQAPISQPREIGQGSNSEQIQWLENSLAQID--HRAPRLVDGFDAKLEDKLMRFQREHGL 510

Query: 152 DPSGMVDSSTLEAMN 166
               +  S TL  +N
Sbjct: 511 RADAIAGSQTLVQLN 525


>gi|326502188|dbj|BAJ98922.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           H G+    + RL++ L   G L  P    +  FDA +E+A++ +Q   GL+ +G +D++T
Sbjct: 56  HFGDERQGLARLKDYLSRFGYLPAPPAKFNDMFDADMETAIRTYQHNFGLEATGQLDAAT 115

Query: 162 LEAM 165
           +  M
Sbjct: 116 VAKM 119


>gi|326488589|dbj|BAJ93963.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326534164|dbj|BAJ89432.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           H G+    + RL++ L   G L  P    +  FDA +E+A++ +Q   GL+ +G +D++T
Sbjct: 56  HFGDERQGLARLKDYLSRFGYLPAPPAKFNDMFDADMETAIRTYQHNFGLEATGQLDAAT 115

Query: 162 LEAM 165
           +  M
Sbjct: 116 VAKM 119


>gi|294498738|ref|YP_003562438.1| L-alanyl-D-glutamate peptidase [Bacillus megaterium QM B1551]
 gi|294348675|gb|ADE69004.1| L-alanyl-D-glutamate peptidase [Bacillus megaterium QM B1551]
          Length = 231

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G     VQ ++  LI  G    S G    F +    AVK FQ    L   G+V   T
Sbjct: 160 IEYGGRGNHVQLIQRMLIHLGY-SLSGGADGIFGSSTLKAVKAFQQALYLQVDGIVGPKT 218

Query: 162 LEAM 165
           LE +
Sbjct: 219 LEKL 222


>gi|282900696|ref|ZP_06308638.1| Peptidoglycan-binding domain protein 1 [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194496|gb|EFA69451.1| Peptidoglycan-binding domain protein 1 [Cylindrospermopsis
           raciborskii CS-505]
          Length = 208

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P++P   L  G+S +S++ L+  LI +G    +  +   F A  E+A+K FQ +  L   
Sbjct: 140 PQMP--TLRFGDSGLSIRVLQRLLISNGY---NVRVDGVFGALTETAIKAFQSQRNLSVD 194

Query: 155 GMVDSSTLEAM 165
           G+V   T   +
Sbjct: 195 GIVGPKTWSQL 205


>gi|127511942|ref|YP_001093139.1| peptidoglycan binding domain-containing protein [Shewanella loihica
           PV-4]
 gi|126637237|gb|ABO22880.1| Peptidoglycan-binding domain 1 protein [Shewanella loihica PV-4]
          Length = 587

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 94  WPELPIRPLHLG--NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +P  +G  ++   +Q L   L      +    L   FDA +E ++  FQ +HGL
Sbjct: 488 WQAPSYQPKEIGRGSAPAQIQWLENALAQIQ--NKPARLVDYFDAELEQSLMDFQRQHGL 545

Query: 152 DPSGMVDSSTLEAMN 166
               +  S TL  +N
Sbjct: 546 RADAIAGSQTLVQLN 560


>gi|114567403|ref|YP_754557.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338338|gb|ABI69186.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 332

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 28/174 (16%)

Query: 89  LSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           + R  +P L    PL  G S   V  ++ RL   G        S  ++      ++LFQ+
Sbjct: 51  IDRTDFPSLFLAEPLLEGES---VWLVQARLKELGY---DIQPSGIYNLPTSQIIRLFQV 104

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
             GL+ +G+V+    EA+                 ++   + K G   + +++ +  L  
Sbjct: 105 ASGLEENGVVNRPVWEALLFSDAGEPC--------LQGDSQDKRGRLLIEIDVASRKLVL 156

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW-----------VIPRSI 250
            E+GK+     V VG+    TP+   ++     N  W            +P  I
Sbjct: 157 TEDGKLVKEYPVAVGKSKTPTPLGEWKVVHKGLN--WGNGFGTRWMGLNVPWGI 208



 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 6/84 (7%)

Query: 87  DILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVK 143
            I+  G      ++P  L   +S   V  ++ RL   G + D + G    +    E AVK
Sbjct: 250 RIVENGKMFPQDLKPVLLKKNSSGQRVVYVQSRLKELGLEFDRADG---RYGNMTELAVK 306

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ   GL+ +G +D +T  AM +
Sbjct: 307 YFQAWRGLEATGEMDEATYRAMGM 330


>gi|291571162|dbj|BAI93434.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 303

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 19/107 (17%)

Query: 76  AQTEKAIAFYQ--------DILSRGGWPELPIRP---------LHLGNSSVSVQRLRERL 118
            +TE+A+  +Q         ++ R  W  L   P         +  G+    V+ L+ RL
Sbjct: 194 PRTERALINFQLSKGLRPTGVVDRSTWQALSKDPHQQTIAETLIKQGDRGSKVKTLQTRL 253

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            ++G       +   F     +AV  FQ+  GL+ +G+VD  T + +
Sbjct: 254 ELTG--HDPGPVDGIFGPKTLAAVSDFQLAMGLESTGVVDDKTWKVL 298



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G   V V  L++RL + G       +   F    E A+  FQ+  GL P+G+VD S
Sbjct: 161 TLARGTQGVQVAGLQQRLEVHGF--SVGRVDSLFGPRTERALINFQLSKGLRPTGVVDRS 218

Query: 161 TLEAMNVPV 169
           T +A++   
Sbjct: 219 TWQALSKDP 227


>gi|282864837|ref|ZP_06273891.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces sp. ACTE]
 gi|282560262|gb|EFB65810.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces sp. ACTE]
          Length = 517

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            +LS G  P+     L  G S  +V+RL+  L  +  L  +  +   F    ++AV+ +Q
Sbjct: 442 ALLSAGTTPQ-----LSQGASGDAVKRLQRALTAA--LGATLAVDGTFGPATDTAVRGYQ 494

Query: 147 MRHGLDPSGMVDSSTLEAM 165
              GL   G V   T  A+
Sbjct: 495 KARGLTVDGHVGPDTWAAL 513



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G++   V+ +++ L   G    +  +   F    +SAV+ FQ   GL   G V + T 
Sbjct: 383 KTGSAGAQVKAVQQLLHDQGYEPGA--VDGLFGTATKSAVQAFQTTRGLPADGTVGARTW 440

Query: 163 EAM 165
            A+
Sbjct: 441 TAL 443


>gi|320007688|gb|ADW02538.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces flavogriseus ATCC 33331]
          Length = 513

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G++   V+ ++  L   G    +      F     +AV+ FQ   GLD  G V   T 
Sbjct: 379 KSGSTGSQVKAVQTLLNQQGY--RAGTEDGVFGTATGNAVRAFQTERGLDADGTVGPKTW 436

Query: 163 EAM 165
            A+
Sbjct: 437 TAL 439



 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            +LS G  P L       G S  +V+RL+  L  +  L  +     AF    + AV+ +Q
Sbjct: 438 ALLSAGTTPALDT-----GASGDAVKRLQRALTAA--LGRTVAADGAFGTNTDKAVRDYQ 490

Query: 147 MRHGLDPSGMVDSSTLEAM 165
               L   G V + T  A+
Sbjct: 491 SSRNLAVDGSVGTGTWAAL 509


>gi|119900262|ref|YP_935475.1| hypothetical protein azo3973 [Azoarcus sp. BH72]
 gi|119672675|emb|CAL96589.1| hypothetical protein azo3973 [Azoarcus sp. BH72]
          Length = 267

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S  +V+RL+ RL+  G       +   F    E+AV  +Q   GL P G+    T
Sbjct: 4   LKRGASGAAVERLQRRLLECGF--DPGLIDGLFGGGSEAAVLAYQWSEGLLPDGIAGPRT 61

Query: 162 LEAM 165
           L+++
Sbjct: 62  LKSL 65


>gi|117164603|emb|CAJ88149.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           ambofaciens ATCC 23877]
          Length = 244

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S   V +L+ R+               + A   +AVK FQ  +GL   G+  S
Sbjct: 40  RTLSEGSSGSDVTQLQIRVAGWVTSGERLSYDGQYGARTAAAVKKFQAAYGLSADGVAGS 99

Query: 160 ST 161
           +T
Sbjct: 100 AT 101


>gi|330466015|ref|YP_004403758.1| peptidase M15A [Verrucosispora maris AB-18-032]
 gi|328808986|gb|AEB43158.1| peptidase M15A [Verrucosispora maris AB-18-032]
          Length = 262

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G S   V+ L+ R+           L   +     +AV+ FQ  +GL   G+   
Sbjct: 41  RTLSQGRSGSDVRELQLRVAGWAGNRDIVELDGRYGPKTAAAVRRFQSAYGLTADGIAGP 100

Query: 160 STLEAM 165
            T   +
Sbjct: 101 QTFAKL 106


>gi|300864980|ref|ZP_07109811.1| Glycoside hydrolase family 25 [Oscillatoria sp. PCC 6506]
 gi|300337015|emb|CBN54961.1| Glycoside hydrolase family 25 [Oscillatoria sp. PCC 6506]
          Length = 440

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ +  VQ +++ L   G    +   +  +    +SA   FQ   GL+  G+V   
Sbjct: 190 SLREGSPAPKVQEIQKHLKNKGFYQGTIDGN--YSTSTKSAAIAFQKSQGLEADGIVGLK 247

Query: 161 TLEAM 165
           TL A+
Sbjct: 248 TLTAL 252


>gi|255527303|ref|ZP_05394182.1| spore cortex-lytic enzyme [Clostridium carboxidivorans P7]
 gi|296185714|ref|ZP_06854123.1| spore cortex-lytic enzyme [Clostridium carboxidivorans P7]
 gi|255508993|gb|EET85354.1| spore cortex-lytic enzyme [Clostridium carboxidivorans P7]
 gi|296049842|gb|EFG89267.1| spore cortex-lytic enzyme [Clostridium carboxidivorans P7]
          Length = 235

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G+    V +++ +L        S  +   +     +AVK FQ ++GL   G+V  STL+
Sbjct: 43  YGSKGGVVSQIQSKLKAWYYYSGS--VDGVYGYGTFTAVKKFQAKNGLKVDGVVGDSTLQ 100

Query: 164 AMNV 167
           A+ +
Sbjct: 101 ALGI 104


>gi|302563365|ref|NP_001180685.1| matrix metallopeptidase 23A (pseudogene) [Macaca mulatta]
          Length = 569

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 46/135 (34%), Gaps = 29/135 (21%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              +  + + ++     D       P+   + IA    A    Q  LSR GW  L     
Sbjct: 15  WLAAPWSTQPESLFHSRDRSDLEPSPLRQAKPIADLHAA----QRFLSRYGWSGLRA--- 67

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                              G        +    A + +AV+ FQ  + L  SG +D++TL
Sbjct: 68  -----------------AWGPSSEGPPETPE-GAALAAAVRRFQRANALPASGELDAATL 109

Query: 163 EAMNVP----VDLRI 173
            AMN P     D R+
Sbjct: 110 AAMNRPRCGVPDTRL 124


>gi|332835329|ref|XP_003312866.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-21-like
           [Pan troglodytes]
          Length = 569

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 41/126 (32%), Gaps = 25/126 (19%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              +    + +N     D       P+   + IA    A    Q  LSR GW  +     
Sbjct: 15  WLAAPWPTQPENLFHSRDRSDLEPSPLRQAKPIADLHAA----QRFLSRYGWSGVWA--- 67

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                              G        +    A +  AV+ FQ  + L  SG +D++TL
Sbjct: 68  -----------------AWGPSPEGPPETPK-GAALAEAVRRFQRANALPASGELDAATL 109

Query: 163 EAMNVP 168
            AMN P
Sbjct: 110 AAMNRP 115


>gi|302553494|ref|ZP_07305836.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
 gi|302471112|gb|EFL34205.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
          Length = 253

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+   V  ++ +L   G  +P   +          AV  FQ  HGL   G+V   T +A
Sbjct: 56  GNAGPCVADVQSKLNQLG-ANPQLDVDGIAGRQTYQAVITFQRSHGLTADGVVGPLTKQA 114

Query: 165 M 165
           +
Sbjct: 115 I 115


>gi|321312058|ref|YP_004204345.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis BSn5]
 gi|320018332|gb|ADV93318.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis BSn5]
          Length = 250

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 96  ELPIRPLHLGN---SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMR 148
            LP   + L +      ++ +L++ L            + G+   +     +AVK FQ+ 
Sbjct: 169 PLPSGVIKLTSPYRKGTNILQLQKALAALHFYPDKGAKNNGIDGVYGPKTANAVKRFQLM 228

Query: 149 HGLDPSGMVDSSTLEAM 165
           +GL   G+    T   +
Sbjct: 229 NGLTADGIYGPKTKAKL 245


>gi|194017081|ref|ZP_03055693.1| N-acetylmuramoyl-L-alanine amidase CwlA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
 gi|194010949|gb|EDW20519.1| N-acetylmuramoyl-L-alanine amidase CwlA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
          Length = 273

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDP-SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           PL  G++   +Q     L    D    + G+   +     +AVK FQ+ HGL   G+   
Sbjct: 203 PLMKGDAVKQIQEAIAALYFYPDKGAKNNGIDGYYGPKTANAVKRFQLMHGLAADGIYGP 262

Query: 160 STLEAM 165
            T   +
Sbjct: 263 KTKAKL 268


>gi|16079624|ref|NP_390448.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221310497|ref|ZP_03592344.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314821|ref|ZP_03596626.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319743|ref|ZP_03601037.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324021|ref|ZP_03605315.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|1730978|sp|P54450|CWLH_BACSU RecName: Full=N-acetylmuramoyl-L-alanine amidase CwlH; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           Flags: Precursor
 gi|1303785|dbj|BAA12441.1| YqeE [Bacillus subtilis]
 gi|2635016|emb|CAB14512.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 250

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 7/77 (9%)

Query: 96  ELPIRPLHLGN---SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMR 148
            LP   + L +      ++ +L++ L +          + G+   +     +AVK FQ+ 
Sbjct: 169 PLPSGVIKLTSPYRKGTNILQLQKALAVLHFYPDKGAKNNGIDGVYGPKTANAVKRFQLM 228

Query: 149 HGLDPSGMVDSSTLEAM 165
           +GL   G+    T   +
Sbjct: 229 NGLTADGIYGPKTKAKL 245


>gi|302556454|ref|ZP_07308796.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302474072|gb|EFL37165.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 113

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 95  PELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           PE+P    L  G++   V  L+ RL+    +     ++  +D  V  AV  FQ  +G+  
Sbjct: 35  PEIPGTGLLRPGDTGHGVYELQVRLLQIPHIYDGGAINGRYDTEVRQAVARFQNAYGIHG 94

Query: 154 S--GMVDSSTLEAM 165
              G+   +T  A+
Sbjct: 95  DETGIYGDNTRHAL 108


>gi|291485022|dbj|BAI86097.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 250

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 96  ELPIRPLHLGN---SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMR 148
            LP   + L +      ++ +L++ L            + G+   +     +AVK FQ+ 
Sbjct: 169 PLPSGVIKLTSPYRKGTNILQLQKALAALHFYPDKGAKNNGIDGVYGPKTANAVKRFQLM 228

Query: 149 HGLDPSGMVDSSTLEAM 165
           +GL   G+    T   +
Sbjct: 229 NGLTADGIYGPKTKAKL 245


>gi|218288187|ref|ZP_03492486.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218241546|gb|EED08719.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 773

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V+ L+  L   G        S  FD   +  VK FQ   GL   G+V   T
Sbjct: 57  LSYGSTGFYVEVLQNALNALGY--DVGQASGVFDGVTQKEVKAFQQAEGLQTDGIVGPMT 114

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
             A+   V    RQ+   L     L++     R V  
Sbjct: 115 WGALAKAVADY-RQVMTVLSSQSSLVQHVEWKRIVWN 150


>gi|332090818|gb|EGI95910.1| lysM domain protein [Shigella boydii 5216-82]
          Length = 334

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNLLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|239982441|ref|ZP_04704965.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces albus
           J1074]
 gi|291454288|ref|ZP_06593678.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces albus J1074]
 gi|729061|sp|P00733|CBPM_STRAL RecName: Full=Zinc D-Ala-D-Ala carboxypeptidase; AltName:
           Full=D-alanyl-D-alanine carboxypeptidase; AltName:
           Full=Metallo DD-peptidase; AltName: Full=Zn
           DD-peptidase; Flags: Precursor
 gi|288967|emb|CAA39319.1| metallo (Zn) DD-peptidase [Streptomyces albus]
 gi|291357237|gb|EFE84139.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces albus J1074]
 gi|228101|prf||1717223A DD peptidase
          Length = 255

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              L  G+S  +V++L+ R  ++G         +   F    ++AV+ FQ  +GL   G+
Sbjct: 49  SGTLSEGSSGEAVRQLQIR--VAGYPGTGAQLAIDGQFGPATKAAVQRFQSAYGLAADGI 106

Query: 157 VDSSTLE 163
              +T  
Sbjct: 107 AGPATFN 113


>gi|157831772|pdb|1LBU|A Chain A, Hydrolase Metallo (Zn) Dd-Peptidase
          Length = 213

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              L  G+S  +V++L+ R  ++G         +   F    ++AV+ FQ  +GL   G+
Sbjct: 7   SGTLSEGSSGEAVRQLQIR--VAGYPGTGAQLAIDGQFGPATKAAVQRFQSAYGLAADGI 64

Query: 157 VDSSTLE 163
              +T  
Sbjct: 65  AGPATFN 71


>gi|308126559|ref|ZP_07663817.1| type II secretory pathway, component ExeA [Vibrio parahaemolyticus
           AQ4037]
 gi|308109785|gb|EFO47325.1| type II secretory pathway, component ExeA [Vibrio parahaemolyticus
           AQ4037]
          Length = 274

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     +++ L + L  +  +  S   +  FD  ++  V+LFQ   G+  
Sbjct: 186 WQAPLKETLRLDMEGPAIEVLDQLLAKA--VSESPLETSIFDGALKERVELFQRWQGIGV 243

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ-VNLMR 182
            G+    TLE +   V      L  +N   
Sbjct: 244 DGIAGHRTLERLQQSVQPNAPTLASINKEE 273


>gi|297204419|ref|ZP_06921816.1| peptidoglycan-binding membrane protein [Streptomyces sviceus ATCC
           29083]
 gi|197716685|gb|EDY60719.1| peptidoglycan-binding membrane protein [Streptomyces sviceus ATCC
           29083]
          Length = 300

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ-MRHGL 151
           G P +    L LG+    V  L+ RL   G  D        FD  V+SAV+ +Q  R  L
Sbjct: 225 GLPPV----LSLGDKGPEVVELQLRLRQVGLYDGEADGD--FDQQVQSAVRTYQVTRFVL 278

Query: 152 DPS-GMVDSSTLEAM 165
               G+   +T  ++
Sbjct: 279 QDDSGVYGRATRASL 293


>gi|182437776|ref|YP_001825495.1| hypothetical protein SGR_3983 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178466292|dbj|BAG20812.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 205

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 15/101 (14%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + +   GGW  +       G S  +V  ++  +   G       +  ++ +    AVK F
Sbjct: 68  RGVDLSGGWSRID-----PGASGATVVVIQHLMNQRGH---GLAVDGSYGSLSVGAVKRF 119

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDL-------RIRQLQVN 179
           Q   GL   G V  +T   +   +         R  Q  +N
Sbjct: 120 QRSAGLAADGQVGPATWPVLVYTLRQGASGSPVRALQTALN 160



 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 12/93 (12%)

Query: 81  AIAFYQD---ILSRGG-----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           A+  +Q    + + G      WP L +  L  G S   V+ L+  L   G       +  
Sbjct: 115 AVKRFQRSAGLAADGQVGPATWPVL-VYTLRQGASGSPVRALQTALNRRG---ARLAVDG 170

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            F +   SAV+ +Q  + L   G     T  A+
Sbjct: 171 GFGSVTTSAVRAYQSGNRLVTDGEAGPVTWRAL 203


>gi|255324016|ref|ZP_05365141.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium
           tuberculostearicum SK141]
 gi|255298873|gb|EET78165.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium
           tuberculostearicum SK141]
          Length = 393

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 12/78 (15%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQM 147
           R L +G++SV V   R  L   G L   KG               +FDA +   +K FQ 
Sbjct: 3   RVLRVGDTSVRVAEARATLARLGLLSDFKGELSAWKKQKYSESDKSFDANLSEVLKAFQQ 62

Query: 148 RHGLDPSGMVDSSTLEAM 165
             G+ P+G +D  TL  +
Sbjct: 63  SRGIVPTGEIDDLTLREL 80



 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
            G     + +   F     +A+K +Q   GL   G+   +T+ A+ +           N+
Sbjct: 115 LGFY--QQRVDGHFGTNTHAALKEYQHNCGLQEDGVCGPATIRALGLLGRRITGGSAHNI 172

Query: 181 ---MRIKKLLEQKMGLRYVL 197
               R++    +  G R V+
Sbjct: 173 QERERVRNAGPKLAGKRVVI 192


>gi|113477429|ref|YP_723490.1| peptidoglycan binding domain-containing protein [Trichodesmium
           erythraeum IMS101]
 gi|110168477|gb|ABG53017.1| Peptidoglycan-binding domain 1 [Trichodesmium erythraeum IMS101]
          Length = 266

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L+  L   G       +   F +    AVK FQ   G+   G+VD  T
Sbjct: 202 LAKGDRGSKVKTLQIGLGTMGF--NPGPIDGIFGSKTTGAVKEFQKSKGIKADGIVDQKT 259

Query: 162 LEAMN 166
            +A N
Sbjct: 260 WKAFN 264



 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + +  G+    V  ++ RL   G    +  +   F A    AVK FQ   GL  +G+VD 
Sbjct: 108 KKISQGSRGAEVWAVQRRLQARGFNPGA--VDSIFGARTTKAVKAFQESVGLTVTGIVDE 165

Query: 160 STLEAMNVP 168
            T  ++  P
Sbjct: 166 LTWTSLAKP 174


>gi|307149992|ref|YP_003885376.1| peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7822]
 gi|306980220|gb|ADN12101.1| Peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7822]
          Length = 516

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 7/100 (7%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L++ L        +      F    + AVK FQ+R GL   G V S T
Sbjct: 285 LRWGDKGDDVKALQQALNRLNFNAGAADGD--FGDQTQEAVKAFQLRSGLLVDGEVGSVT 342

Query: 162 LEAMNVPVDLRIRQLQV-----NLMRIKKLLEQKMGLRYV 196
            E +     + +  L          +++         +Y+
Sbjct: 343 WEKLGGTGKVILPNLASFAASEAAKKLRWNGASSDAEKYL 382


>gi|220931943|ref|YP_002508851.1| peptidase M23B [Halothermothrix orenii H 168]
 gi|219993253|gb|ACL69856.1| peptidase M23B [Halothermothrix orenii H 168]
          Length = 324

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L LG+    V+++++ L   G       +   F    +  V+ FQ+ +GLD  G
Sbjct: 6   PVLATTLKLGDRGREVKKVQQILRDLGY---DIEVDSVFGYRTKQVVQAFQLNNGLDVDG 62

Query: 156 MVDSSTLEAM 165
           +V   TL  +
Sbjct: 63  IVGDKTLNLL 72


>gi|89894299|ref|YP_517786.1| hypothetical protein DSY1553 [Desulfitobacterium hafniense Y51]
 gi|219668710|ref|YP_002459145.1| NLP/P60 protein [Desulfitobacterium hafniense DCB-2]
 gi|89333747|dbj|BAE83342.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538970|gb|ACL20709.1| NLP/P60 protein [Desulfitobacterium hafniense DCB-2]
          Length = 232

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+   +V  L+  L   G       +   F A  ++AV+ FQ    +   G+V   T
Sbjct: 30  LKVGSRGSAVSTLQSNLQTLGY--EVGPIDGIFGAKTKTAVQKFQTASRIQVDGIVGPQT 87

Query: 162 LEAMNVPVDLRIRQLQ 177
            +A+   +  +   L+
Sbjct: 88  QQALTKALGSKTTALE 103


>gi|119491208|ref|ZP_01623305.1| hypothetical protein L8106_25370 [Lyngbya sp. PCC 8106]
 gi|119453549|gb|EAW34710.1| hypothetical protein L8106_25370 [Lyngbya sp. PCC 8106]
          Length = 176

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 10/102 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S+  V+ L+++L   G       L + F+  +E+ VK FQ   GL   G+V   T
Sbjct: 3   LKSGQSTHQVKNLQQQLERLGY--SVGRLGLPFNTQLENIVKAFQAEQGLPVDGVVGEIT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
                    L+++Q    L  +    +  +     + N    
Sbjct: 61  --------QLKLQQAIAELELLANSQKSPIPQPPQINNSGDF 94


>gi|302392565|ref|YP_003828385.1| peptidase M23 [Acetohalobium arabaticum DSM 5501]
 gi|302204642|gb|ADL13320.1| Peptidase M23 [Acetohalobium arabaticum DSM 5501]
          Length = 354

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L +R L +G     V+ L++RL   G    S  +   F    +  VK FQ ++ L   G
Sbjct: 29  SLGVRDLEVGMRGSDVKLLQQRLNNLGY---SIEVDGIFGKETKKIVKKFQEKNDLFSDG 85

Query: 156 MVDSSTLEAM 165
           +V + T+  +
Sbjct: 86  IVGTRTIYYL 95


>gi|182436235|ref|YP_001823954.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326776864|ref|ZP_08236129.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464751|dbj|BAG19271.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326657197|gb|EGE42043.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 260

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              L  G+S  +V++L+ R  ++G         +  AF    ++AV+ FQ  +GL   G+
Sbjct: 54  SGTLQEGSSGEAVRQLQIR--VAGYPGTGNQIAIDGAFGPATKAAVQRFQAAYGLAADGI 111

Query: 157 VDSSTLE 163
             + T  
Sbjct: 112 AGAQTFN 118


>gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501]
 gi|67857255|gb|EAM52495.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501]
          Length = 191

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 52/157 (33%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            +V++N+    +   ++ +V     V +GR   +TP  +  + +++ +P W         
Sbjct: 66  THVVLNLKERRVYVYQDDQVIANYRVAIGRPGWETPKGNFSVIQMVEDPQW--------- 116

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                  ++P                 V                    PG  + +    I
Sbjct: 117 -------KNP-------------WNGRVS------------------APGPNSPLGERWI 138

Query: 314 EFYSRNNTY--MHDTPEPILFNNVVRFETSGCVRVRN 348
            F      Y   H TP   +        + GCVR+RN
Sbjct: 139 GFSREGGKYIGFHGTPGEHVMGQ---AVSHGCVRMRN 172


>gi|157145958|ref|YP_001453277.1| hypothetical protein CKO_01711 [Citrobacter koseri ATCC BAA-895]
 gi|157083163|gb|ABV12841.1| hypothetical protein CKO_01711 [Citrobacter koseri ATCC BAA-895]
          Length = 334

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 55/172 (31%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL        ++VN+    L     G+       + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPREGIIVNLAELRLYYFPPGENSVQVYPIGIGLEGLETPVMATRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I ++ +            +  I +                             G 
Sbjct: 148 TPTAGIRKRSL------------ERGITL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRFALRLAYGNGEYLIHGTNAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|166368768|ref|YP_001661041.1| lysozyme [Microcystis aeruginosa NIES-843]
 gi|166091141|dbj|BAG05849.1| probable lysozyme [Microcystis aeruginosa NIES-843]
          Length = 504

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 26/189 (13%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSV 109
            ++ N          S IP  ++   A   + +     ++     P+L    L  G S  
Sbjct: 209 QQYPNARNFHLAEPGSPIPQATQIVFAGRNQTL----SLVENP--PQLNRGLLLKGMSDE 262

Query: 110 S-----VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR---HGLDPSGMVDSST 161
                 ++ ++ERL   G     K L   F +  + AV+ FQ     H  +  G V   T
Sbjct: 263 DAPGYDIREMQERLKDLGYY--QKELDGIFGSGTDEAVRKFQADVFGHS-EADGKVGPKT 319

Query: 162 LEAM---NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
              +           +  +   +R+ K  ++     Y+L+      LE ++NG+V     
Sbjct: 320 WAKLWGEETTPTPTPQPAEGTYLRLTKTNQKDGDGLYILI------LEYIKNGQVKDHLK 373

Query: 219 VIVGRVDRQ 227
           V  G+  +Q
Sbjct: 374 VCSGQRSKQ 382


>gi|160872859|ref|ZP_02062991.1| LysM domain protein [Rickettsiella grylli]
 gi|159121658|gb|EDP46996.1| LysM domain protein [Rickettsiella grylli]
          Length = 326

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 45/163 (27%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  ++ G   +++N+    +    + + + +   V +GR    TP+  S I   M NP W
Sbjct: 104 LPPKRQG---LIINLAELRIYYYPSHRHIVITYPVGIGREGWDTPLGPSWIAEKMRNPIW 160

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P SI +KD                                   + E      +  PG 
Sbjct: 161 TVPESI-RKD----------------------------------RAKEGVYLPIKVAPGP 185

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
            N +    +    +  TY +H T +           ++GC+R+
Sbjct: 186 DNPLGGYAMRL--KQVTYLIHGTNDSQGIGRRS---SAGCIRL 223


>gi|303239381|ref|ZP_07325909.1| peptidase M14 carboxypeptidase A [Acetivibrio cellulolyticus CD2]
 gi|302593167|gb|EFL62887.1| peptidase M14 carboxypeptidase A [Acetivibrio cellulolyticus CD2]
          Length = 423

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +  L LG++  +V+ ++  L   G    +  +        + A+K FQ  +GL P G+V 
Sbjct: 1   METLTLGSTGPNVKLIQSLLNRIGY--NAGPVDGKLGLQTQQAIKAFQRNYGLVPDGVVG 58

Query: 159 SSTLE 163
            +T  
Sbjct: 59  PATWR 63


>gi|295314758|gb|ADF97529.1| PlyM4 [uncultured phage]
          Length = 329

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L    G    F    E+AVK FQ  +GL   G+  + +   
Sbjct: 183 GDTGDNVRALQTGLKQAGFLLSVDG---IFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 239

Query: 165 MN 166
           +N
Sbjct: 240 LN 241


>gi|91794173|ref|YP_563824.1| peptidoglycan binding domain-containing protein [Shewanella
           denitrificans OS217]
 gi|91716175|gb|ABE56101.1| Peptidoglycan-binding domain 1 [Shewanella denitrificans OS217]
          Length = 572

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 100 RPLHLGNSSVSVQRLRERLI-ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R +  G+    VQ L   L  I+G       L   FD  +E  +  FQ +HGL   G+  
Sbjct: 487 REISRGSHLSQVQWLENNLAKING---RQARLMDDFDHELERELMAFQRQHGLKADGIAG 543

Query: 159 SSTLEAMN 166
           S TL  +N
Sbjct: 544 SQTLVQLN 551


>gi|319645390|ref|ZP_07999622.1| CtpA protein [Bacillus sp. BT1B_CT2]
 gi|317392276|gb|EFV73071.1| CtpA protein [Bacillus sp. BT1B_CT2]
          Length = 465

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            Q +  +  Y  +      P L  +     G++   V+  ++ L   G        + AF
Sbjct: 358 PQYKAELPSYAKL------PYLDSKKEYKAGSTGDEVKAAQQMLQALGY---KLNATGAF 408

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           DA  E+AVK FQ    L  +G++   T  ++   +  ++
Sbjct: 409 DAQTEAAVKAFQKDQKLKTTGILTGETTISLTSKLQDKL 447


>gi|312621329|ref|YP_004022942.1| carboxyl-terminal protease [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312201796|gb|ADQ45123.1| carboxyl-terminal protease [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 472

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +    G+  + V   ++RL   G L      +   D    +A+K FQ  + L P G++D
Sbjct: 381 TKKYKKGDMDLEVLAAQQRLFYLGYLS---SWTAKMDDNTVAAIKKFQKDNKLYPYGVLD 437

Query: 159 SSTLEAMN 166
            +T + +N
Sbjct: 438 VTTQKKLN 445


>gi|197121993|ref|YP_002133944.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter sp. K]
 gi|196171842|gb|ACG72815.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter sp. K]
          Length = 284

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 51/163 (31%), Gaps = 44/163 (26%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVG-LRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +L        V+VN+    L  +  G    +   V +G+   +TP+    +      P 
Sbjct: 76  WILPPSAAPGSVVVNLSEMRLYLLPGGDAAPVTYPVGIGKDRAKTPLGSFTVIGKTVAPT 135

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P S+ + D                                       P    R  PG
Sbjct: 136 WYPPASMRRDD---------------------------------------PTLPDRVPPG 156

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
             N + +  +   S  +  +H T EP  F  + R  + GCVR+
Sbjct: 157 PDNPLGTHALRL-SAGSILIHGTDEP--FG-IGRKFSHGCVRL 195


>gi|52080651|ref|YP_079442.1| carboxy-terminal processing protease [Bacillus licheniformis ATCC
           14580]
 gi|52786025|ref|YP_091854.1| CtpA [Bacillus licheniformis ATCC 14580]
 gi|52003862|gb|AAU23804.1| carboxy-terminal processing protease [Bacillus licheniformis ATCC
           14580]
 gi|52348527|gb|AAU41161.1| CtpA [Bacillus licheniformis ATCC 14580]
          Length = 465

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            Q +  +  Y  +      P L  +     G++   V+  ++ L   G        + AF
Sbjct: 358 PQYKAELPSYAKL------PYLDSKKEYKAGSTGDEVKAAQQMLQALGY---KLNATGAF 408

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           DA  E+AVK FQ    L  +G++   T  ++   +  ++
Sbjct: 409 DAQTEAAVKAFQKDQKLKTTGILTGETTISLTSKLQDKL 447


>gi|114567038|ref|YP_754192.1| hypothetical protein Swol_1518 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337973|gb|ABI68821.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 241

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            L  R L  G+    V+ L+  L I  D +         F    E+AVK FQ    L   
Sbjct: 6   TLGSRVLRRGDEGTDVELLQNLLKILPDPIGSGIKEKGVFGKETENAVKKFQKYFNLAID 65

Query: 155 GMVDSSTLEAMNVPVDLRI 173
           G+V ++T   + VP    I
Sbjct: 66  GIVGANTFLFLGVPTASYI 84



 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 16/124 (12%)

Query: 47  IVNDRFDNFLARVDMGIDSDIP-----IISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
             N  FD+           D+      I+  +T+ Q          IL +G W       
Sbjct: 126 PANRNFDSKTESAVKMFQRDVHLEGDGIVGPQTVYQLYNYATMGARILQKGRWDR----- 180

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
               N    V  L+  L   G       L   F +  E+AVK  Q   G+   G+V ++T
Sbjct: 181 ----NQGYDVYWLQRNLQELGYY--QGKLDGKFGSQTEAAVKKLQEASGIKVDGIVGANT 234

Query: 162 LEAM 165
              +
Sbjct: 235 FYHL 238



 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISG--DLDP-SKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            R L  G+    V  L+ RL  +     D   +  +  FD+  ESAVK+FQ    L+  G
Sbjct: 93  ARILQKGSYGYDVWVLQNRLATTAKKFADTLGQPANRNFDSKTESAVKMFQRDVHLEGDG 152

Query: 156 MVDSSTLEAM 165
           +V   T+  +
Sbjct: 153 IVGPQTVYQL 162


>gi|188589391|ref|YP_001922286.1| spore cortex-lytic enzyme, pre-pro-form [Clostridium botulinum E3
           str. Alaska E43]
 gi|188499672|gb|ACD52808.1| spore cortex-lytic enzyme, pre-pro-form [Clostridium botulinum E3
           str. Alaska E43]
          Length = 697

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 27/131 (20%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P  PL L + + +V+ ++++L         +      +  FD   E AVK+FQ    L  
Sbjct: 321 PGTPLRLNDENNNVKVIQKQLNRISKNFPAIPKIPYENGKFDKITEDAVKVFQKVFNLTQ 380

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL----------LEQKMGLRYVLVNIPAA 203
            G+V  +T          RI  + V + R+ +L               G+ Y     P  
Sbjct: 381 DGIVGRATWY--------RISSIYVGVKRLAELDQEPEIDGENPPPDSGVEY-----PGY 427

Query: 204 SLEAVENGKVG 214
            L+    G+  
Sbjct: 428 LLKYGSRGEKV 438



 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L LG+    V   ++    L  +  +      +  FD   E++VK  Q + GL  +
Sbjct: 609 PGFDLELGDQDGYVTVFQKYVNVLAKNNYISSQIEENGVFDKRTENSVKELQEKFGLKVT 668

Query: 155 GMVDSSTL 162
           G+VD  T 
Sbjct: 669 GVVDKITW 676



 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLII--SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L  G+    V+ ++  L +       PS      F    +  V +FQ   GL P G
Sbjct: 425 PGYLLKYGSRGEKVKEVQNYLSVISKSYNIPSIKADGIFGQMTKDTVIVFQRLFGLSPDG 484

Query: 156 MVDSSTLE 163
           +V  +T  
Sbjct: 485 VVGLNTWN 492


>gi|148266086|ref|YP_001232792.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
 gi|146399586|gb|ABQ28219.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
          Length = 292

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 46/165 (27%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
            ++   +    +++N+    L      +  ++     + +G   + TP+   R+ + + N
Sbjct: 85  WIVPASLKWGGIVINLSEMRLYYSFSFKGARLIASFPIGIGDEGKDTPVGTFRVIQKIEN 144

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W +P+S+                                         E P       
Sbjct: 145 PSWYVPQSV---------------------------------------KMEKPELPDVVP 165

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           PG  N + +  +   S     +H T +P     V R  + GC+R+
Sbjct: 166 PGPDNPLGTHAMRL-SERTILIHGTNKPW---GVGRRVSHGCIRL 206


>gi|223043295|ref|ZP_03613342.1| carboxy- processing protease [Staphylococcus capitis SK14]
 gi|222443506|gb|EEE49604.1| carboxy- processing protease [Staphylococcus capitis SK14]
          Length = 492

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  HLG+ + +V+ ++  L   G        S  FD+ +ESA+K FQ  + L+ +G  D 
Sbjct: 406 KTYHLGDENKNVKTMKIGLTALGY--KVNNESNQFDSELESAIKSFQKDNHLEVTGKFDK 463

Query: 160 ST 161
           +T
Sbjct: 464 TT 465


>gi|78043998|ref|YP_360473.1| prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|77996113|gb|ABB15012.1| prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase
           [Carboxydothermus hydrogenoformans Z-2901]
          Length = 231

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           + LG+    V  +++ L   G L     +   F A  E+AVK FQ    +   G+V   T
Sbjct: 3   IKLGDKGSQVIEVQKMLKQLGFLK--DKVDGVFGANTEAAVKSFQRTKQIAIDGIVGPVT 60

Query: 162 LEAM 165
              +
Sbjct: 61  YNLL 64


>gi|284053940|ref|ZP_06384150.1| peptidoglycan binding domain-containing protein [Arthrospira
           platensis str. Paraca]
          Length = 160

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 19/107 (17%)

Query: 76  AQTEKAIAFYQ--------DILSRGGWPELPIRP---------LHLGNSSVSVQRLRERL 118
            +TE+A+  +Q         ++ R  W  L   P         +  G+    V+ L+ RL
Sbjct: 51  PRTERALINFQLSKGLRPTGVVDRSTWQALSKDPHQQTIAETLIKQGDRGSKVKTLQTRL 110

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            ++G       +   F     +AV  FQ+  GL+ +G+VD  T + +
Sbjct: 111 ELTG--HDPGPVDGIFGPKTLAAVSDFQLAMGLESTGVVDDKTWKVL 155



 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G   V V  L++RL + G       +   F    E A+  FQ+  GL P+G+VD S
Sbjct: 18  TLARGTQGVQVAGLQQRLEVHGF--SVGRVDSLFGPRTERALINFQLSKGLRPTGVVDRS 75

Query: 161 TLEAMNVPV 169
           T +A++   
Sbjct: 76  TWQALSKDP 84


>gi|170076716|ref|YP_001733354.1| peptidoglycan binding protein; putative penicillin-resistant
           DD-carboxypeptidase [Synechococcus sp. PCC 7002]
 gi|169884385|gb|ACA98098.1| peptidoglycan binding protein; putative penicillin-resistant
           DD-carboxypeptidase [Synechococcus sp. PCC 7002]
          Length = 230

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L +G++   VQ L+  L + G        +  +D     AV  FQ    +  +G++
Sbjct: 38  PRPELRIGSTGTVVQELQTTLRLLGYYSGE--TTGTYDEATVIAVYQFQKAAQIPQTGVM 95

Query: 158 DSSTLEAM------NVPVDL 171
           D +T E +      N+PV  
Sbjct: 96  DRTTWETLFPISAANLPVAE 115



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 5/127 (3%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP-ELP 98
           I+ +   +  ++     A       ++ P    +     E A +   +  +    P  LP
Sbjct: 106 ISAANLPVAEEQAPTPTASSPTTAQNETPATPAQEATDAEAAPSSSTNQTATSTDPDTLP 165

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +  L  G    SV+ L+ RL   G       +   F      AV   Q    LD  G+V 
Sbjct: 166 L--LKEGMEGDSVKLLQTRLQALGYYTG--RIDGIFGPNTRIAVIAAQTALKLDGDGIVG 221

Query: 159 SSTLEAM 165
           + T   +
Sbjct: 222 AQTWRKL 228


>gi|332978200|gb|EGK14932.1| N-acetylmuramoyl-L-alanine amidase [Desmospora sp. 8437]
          Length = 330

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 94  W-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W P +  R    G+    V  L+ RL   G       +   F    + AV+ FQ R GL 
Sbjct: 103 WAPGVSNRIFKKGDRGGYVWELQRRLQFIGYYSG--KIDGKFGWQTDRAVRDFQYRFGLR 160

Query: 153 PSGMVDSST 161
             G V S T
Sbjct: 161 VDGRVGSKT 169



 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G +   V  L+ RL   G         + +  Y   AV+LFQ + GL+  G+V S T
Sbjct: 35  LKVGAAGGDVYELQGRLKYLGFYTGKIDGRLGWRTY--RAVRLFQYQFGLEVDGLVGSHT 92

Query: 162 LEAM 165
              +
Sbjct: 93  KRKL 96


>gi|170726803|ref|YP_001760829.1| peptidoglycan-binding domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169812150|gb|ACA86734.1| Peptidoglycan-binding domain 1 protein [Shewanella woodyi ATCC
           51908]
          Length = 294

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 12/119 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L + +S   V+ L+E L +   L P        D   E AV  FQ + GL   G+V + T
Sbjct: 4   LRIKSSGEEVKSLQELLTVL-HLSPGPIDGEFGDKT-EDAVLQFQEQQGLYADGVVGTIT 61

Query: 162 LEAMNVPVDLRIR---QLQVNLMRIKKL-------LEQKMGLRYVLVNIPAASLEAVEN 210
             A+     +++    Q  V   R+           +      Y+  +   A L   E 
Sbjct: 62  WNALKKAAVVQLDEQNQPSVESDRLMSWQRVAADPYQDGYNRFYLREDAAKAYLRVYEK 120


>gi|54297508|ref|YP_123877.1| hypothetical protein lpp1553 [Legionella pneumophila str. Paris]
 gi|53751293|emb|CAH12704.1| hypothetical protein lpp1553 [Legionella pneumophila str. Paris]
          Length = 244

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L   +  + V++N+    L     +  V +   V +G+   +TP+  SRI     NP
Sbjct: 88  RFILP-NVPRKGVVINLAEYRLYYFPPDDNVVMTYPVGIGKKGWETPLGLSRITSKEINP 146

Query: 243 YWV 245
            W 
Sbjct: 147 TWR 149


>gi|289642266|ref|ZP_06474415.1| NLP/P60 protein [Frankia symbiont of Datisca glomerata]
 gi|289507901|gb|EFD28851.1| NLP/P60 protein [Frankia symbiont of Datisca glomerata]
          Length = 360

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 8/79 (10%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           +  S  G  E P R L LG+    V RL+ RL I  D          F       V+ FQ
Sbjct: 127 EWESSDGRQEFPRRSLRLGSQGDPVARLQIRLGIFAD--------GRFGPRTARGVRTFQ 178

Query: 147 MRHGLDPSGMVDSSTLEAM 165
              GL    +V   T  A+
Sbjct: 179 SGAGLTIDAVVGPRTWGAL 197


>gi|254421544|ref|ZP_05035262.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
 gi|196189033|gb|EDX83997.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
          Length = 146

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-GMV 157
           + PLH G+   +V +L+ RL           ++  FD   + A+  FQ  +G+    G  
Sbjct: 12  LEPLHEGDRGPAVAQLQARLAELNAYSSQ--ITGLFDVTTKRALTDFQADYGITEEAGFF 69

Query: 158 DSSTLEAM 165
              T  A+
Sbjct: 70  GPQTWYAL 77


>gi|294139662|ref|YP_003555640.1| general secretion pathway protein A [Shewanella violacea DSS12]
 gi|293326131|dbj|BAJ00862.1| general secretion pathway protein A [Shewanella violacea DSS12]
          Length = 531

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   +  +  G++   +Q L   L        +  L   FD+ +E+ +K FQ +HGL   
Sbjct: 445 PTDQLGEIDKGSAQSQIQWLENSLAQVD--SRTPRLLNDFDSQLETKLKHFQRQHGLRAD 502

Query: 155 GMVDSSTLEAMN 166
            +  S TL  +N
Sbjct: 503 AIAGSQTLVQLN 514


>gi|220907385|ref|YP_002482696.1| peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7425]
 gi|219863996|gb|ACL44335.1| Peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7425]
          Length = 160

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%)

Query: 89  LSRGGWPELPIR----PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           L+   W  +P       L+  ++  +V  L+E L   G      G    F A  E+AV  
Sbjct: 6   LNADSWRPVPAALTGPVLYPWDAGPAVFELQELLNAHGFRLKLDGD---FGAKTETAVGE 62

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           FQ R+GL   G+V   T  A+
Sbjct: 63  FQRRYGLRVDGIVGPQTWVAL 83



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G++   V +L+  L ISG           F A  E A+  FQ +H L P G+VD
Sbjct: 91  TRVLKRGHTGADVFQLQWLLQISG---QQVVRDGIFGAATEQALIEFQQKHKLKPDGIVD 147

Query: 159 SSTLEAM 165
             T   +
Sbjct: 148 LITWRML 154


>gi|289643979|ref|ZP_06476080.1| Peptidoglycan-binding domain 1 protein [Frankia symbiont of Datisca
           glomerata]
 gi|289506207|gb|EFD27205.1| Peptidoglycan-binding domain 1 protein [Frankia symbiont of Datisca
           glomerata]
          Length = 262

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             V R+++RL   G    S  +   F       VK +Q +HGL   G+V + T   +
Sbjct: 205 TEVARVQQRLTDLGY---SLAVDGIFGPRTTRVVKDYQRQHGLVADGIVGARTYAQL 258


>gi|169834766|ref|YP_001715696.1| LycA [Clostridium botulinum A3 str. Loch Maree]
 gi|169408873|gb|ACA57283.1| LycA [Clostridium botulinum A3 str. Loch Maree]
          Length = 316

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T 
Sbjct: 249 KQGERGGITKVIQQMLINIGYPVGSHGADGVFGDDTVTAIKAFQRDCHLVVDGIVGKETW 308

Query: 163 EAM 165
           EA+
Sbjct: 309 EAL 311


>gi|168184756|ref|ZP_02619420.1| glycosyl hydrolase, family 25/peptidoglycan binding domain protein
           [Clostridium botulinum Bf]
 gi|182672158|gb|EDT84119.1| glycosyl hydrolase, family 25/peptidoglycan binding domain protein
           [Clostridium botulinum Bf]
          Length = 316

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T 
Sbjct: 249 KQGERGGITKVIQQMLINIGYPVGSHGADGVFGDDTVTAIKAFQRDCHLVVDGIVGKETW 308

Query: 163 EAM 165
           EA+
Sbjct: 309 EAL 311


>gi|302561223|ref|ZP_07313565.1| N-acetylmuramyl-L-alanine amidase [Streptomyces griseoflavus
           Tu4000]
 gi|302478841|gb|EFL41934.1| N-acetylmuramyl-L-alanine amidase [Streptomyces griseoflavus
           Tu4000]
          Length = 262

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 11/89 (12%)

Query: 86  QDILSRGG-----WPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
           + +++ G      W  L     +  +  G++  +V+RL+  L  +  L  +  +   F +
Sbjct: 172 RKLVADGSVGPKTWTALLSAGQVVTVRGGSTGEAVKRLQRALTAA--LGRTVAVDGTFGS 229

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             ESAV  +Q   GL   G+   +T  A+
Sbjct: 230 ATESAVVSYQSSRGLTADGIAGPATWSAL 258



 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G +   V+ L+  L        +   S  F    ESAVK FQ    L   G V   
Sbjct: 126 TLKRGATGEHVRALQTLLKAQSFDPGTVDGS--FGPATESAVKAFQASRKLVADGSVGPK 183

Query: 161 TLEAM 165
           T  A+
Sbjct: 184 TWTAL 188


>gi|182417949|ref|ZP_02949259.1| spore cortex-lytic enzyme pre-pro-form [Clostridium butyricum 5521]
 gi|237669439|ref|ZP_04529421.1| peptidoglycan-binding domain 1 protein [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182378258|gb|EDT75792.1| spore cortex-lytic enzyme pre-pro-form [Clostridium butyricum 5521]
 gi|237655326|gb|EEP52884.1| peptidoglycan-binding domain 1 protein [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 575

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P + L LG+S   V+ ++ +L         +     ++  F+   ++AVK FQ    L  
Sbjct: 307 PGKALKLGDSGSDVKVIQTQLNRIRKNYPAIPQINNVNGEFNDATKNAVKEFQKIFNLTA 366

Query: 154 SGMVDSSTLE 163
            G+V   T  
Sbjct: 367 DGIVGKKTWY 376



 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 67/181 (37%), Gaps = 22/181 (12%)

Query: 4   YLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINE----SYHSIVNDRFDNFLARV 59
           Y++ N   Y       L +G S  +  +  + L+ I          + VN  F++     
Sbjct: 298 YIQGNIESY---PGKALKLGDSGSDVKVIQTQLNRIRKNYPAIPQINNVNGEFNDATKNA 354

Query: 60  DMGIDSDIP-----IISKETIAQTEK---AIAFYQDILSRGG----WPELPIRPLHLGNS 107
                         I+ K+T  +  +    +    ++ S G       E+P   L LG+ 
Sbjct: 355 VKEFQKIFNLTADGIVGKKTWYKISQIYVGVKKLAELESEGEELQIPSEIPTEVLKLGSQ 414

Query: 108 SVSVQRLRERLIISG---DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
             +V+ L+  LI  G   D      ++  FD   E++VK FQ    LD  G+V   T   
Sbjct: 415 GTNVKILQYLLICIGAFYDSILPVKITGKFDTDTENSVKSFQQEFNLDNDGIVGKKTWSK 474

Query: 165 M 165
           +
Sbjct: 475 L 475



 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 8/89 (8%)

Query: 85  YQDIL-----SRGGWPELPIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDA 136
           Y++I      + G + + P   +  G     VQ+++  L  I       P   +   F +
Sbjct: 479 YKNIEPHILDASGKFIKYPGYLIKKGKRGEDVQQIQVWLNTIHSKYPFIPEVDVDGIFGS 538

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               AV  FQ  + L   G+V   T + +
Sbjct: 539 GTREAVMDFQRWNDLVEDGIVGKLTWDKL 567


>gi|158334241|ref|YP_001515413.1| ErfK/YbiS/YcfS/YnhG family protein [Acaryochloris marina MBIC11017]
 gi|158304482|gb|ABW26099.1| ErfK/YbiS/YcfS/YnhG family protein [Acaryochloris marina MBIC11017]
          Length = 201

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 54/184 (29%), Gaps = 47/184 (25%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           L + +  L    G R + ++I    +   +  +V     V VG+    TP+    +   +
Sbjct: 58  LDQPRNYLPSAHGTRRLELSISRRQVTLFQGDQVLKSYPVAVGKAGWPTPVGDFEVQTKV 117

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W                Q+P   +     +    G         W           
Sbjct: 118 RNPSW----------------QNP--FQGKGYVI--PGGAPDNPLSTRW----------- 146

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLL 357
                   +         +N    H TP      +V    + GCVR+   +I +L   + 
Sbjct: 147 --------LG---FWTNGKNWIGFHGTPNR---ASVGSAASHGCVRMYDEHIQELFELVA 192

Query: 358 KDTP 361
             TP
Sbjct: 193 VGTP 196


>gi|332798862|ref|YP_004460361.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1]
 gi|332696597|gb|AEE91054.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1]
          Length = 176

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
              +  L  G+    V  +++RL   G  + +      ++   + AV  FQ   GL PSG
Sbjct: 103 TFGLNTLSQGSRGSDVLEVQKRLAGYGFYNGA--YDGIYEHETQKAVLAFQKAKGLYPSG 160

Query: 156 MVDSSTLEAMNVP 168
            VD++T + + + 
Sbjct: 161 KVDAATYKELGIS 173


>gi|220916767|ref|YP_002492071.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219954621|gb|ACL65005.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 285

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 51/163 (31%), Gaps = 44/163 (26%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +L        ++VN+    L  +   G   +   V +G+   +TP+    +      P 
Sbjct: 77  WILPPSAAPGSIVVNLSEMRLYLLPGGGAAPVTYPVGIGKDRAKTPLGSFTVIGKTVAPT 136

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P S+ + D                                       P    R  PG
Sbjct: 137 WYPPASMRRDD---------------------------------------PTLPDRVPPG 157

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
             N + +  +   S  +  +H T EP  F  + R  + GCVR+
Sbjct: 158 PDNPLGTHALRL-SAGSILIHGTDEP--FG-IGRKFSHGCVRL 196


>gi|332296341|ref|YP_004438264.1| NLP/P60 protein [Thermodesulfobium narugense DSM 14796]
 gi|332179444|gb|AEE15133.1| NLP/P60 protein [Thermodesulfobium narugense DSM 14796]
          Length = 233

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ S  VQ ++E+L   G    +  ++  +D   E AVKL+Q    L  +G+VD  
Sbjct: 26  TLKPGDISDDVQNIKEKLYDLGY---NVTVNKVYDEKTERAVKLYQKEAKLPITGIVDDI 82

Query: 161 TLEAMNV 167
           T + + +
Sbjct: 83  TYQCLTM 89


>gi|326328746|ref|ZP_08195084.1| zinc D-Ala-D-Ala carboxypeptidase [Nocardioidaceae bacterium
           Broad-1]
 gi|325953489|gb|EGD45491.1| zinc D-Ala-D-Ala carboxypeptidase [Nocardioidaceae bacterium
           Broad-1]
          Length = 251

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 29/67 (43%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G+S  +V +L+ R+           +  ++     +AV+ FQ  +GL   G+  
Sbjct: 42  SGTLQQGSSGNAVTQLQIRVAGWAATGTIFSIDGSYGPATTTAVRNFQAAYGLAADGVAG 101

Query: 159 SSTLEAM 165
           ++T   +
Sbjct: 102 TNTFNKL 108


>gi|255534894|ref|YP_003095265.1| putative phage-related protein (hydrolase) [Flavobacteriaceae
           bacterium 3519-10]
 gi|255341090|gb|ACU07203.1| putative phage-related protein (hydrolase) [Flavobacteriaceae
           bacterium 3519-10]
          Length = 273

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +   + +V  L E L   G       +S +F A V++AVK FQ ++ L   G+V   
Sbjct: 3   TLKVKAKAPAVYTLCEMLSKLGY---PVKISDSFTAEVDAAVKDFQKKNALVVDGVVGMK 59

Query: 161 TLEAM 165
           T + +
Sbjct: 60  TWQVL 64


>gi|295314764|gb|ADF97532.1| PlyM7 [uncultured phage]
          Length = 356

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 11/76 (14%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L    G    F    E+AVK FQ  +GL   G+        
Sbjct: 220 GDTGAAVKTLQSELKQAGFLLSVDG---IFGKGTETAVKAFQRANGLAVDGVFG------ 270

Query: 165 MNVPVDLRIRQLQVNL 180
                  ++  +  NL
Sbjct: 271 --TGSQAKLDAILANL 284


>gi|291437660|ref|ZP_06577050.1| lipoprotein [Streptomyces ghanaensis ATCC 14672]
 gi|291340555|gb|EFE67511.1| lipoprotein [Streptomyces ghanaensis ATCC 14672]
          Length = 277

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 24/137 (17%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G+S   V+ L+ RL  +  L    G +  +D   E AVK FQ + GL  +G  D+ T +
Sbjct: 74  PGDSGRDVRELQARLRQAAWL--FHGPTGTYDGPTEEAVKGFQGKRGLPRTGRTDTVTWQ 131

Query: 164 AMNVPVDLRIRQLQVNLM--RIKKLL----EQKMGL------RYVLVNIPAASLEAVENG 211
                     R L +     R +  L                R + ++  + +L  + +G
Sbjct: 132 ----------RLLGMTREPGRWELYLMGGQPADAPDARCRTGRVLCISKSSRTLRWMVDG 181

Query: 212 KVGLRSTVIVGRVDRQT 228
           +      V  G     T
Sbjct: 182 RTVSTMPVRFGSEYTPT 198


>gi|90407231|ref|ZP_01215418.1| general secretion pathway protein a [Psychromonas sp. CNPT3]
 gi|90311654|gb|EAS39752.1| general secretion pathway protein a [Psychromonas sp. CNPT3]
          Length = 526

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERLIIS 121
           +    ++  + I+ +E  + +Y D      W  P      L L     +V+ L++ L   
Sbjct: 410 EDYQLLLGSQLISVSEAWLQYYWDGDLTLLWKRPFKEKGVLKLSQQGENVRWLKQTLSTL 469

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL----EAMN 166
             +D   G    FD  + S V+ FQ    L   G+V S TL    +A+N
Sbjct: 470 QAVD--LGNDDYFDPALASKVQQFQETQQLSQDGIVGSRTLMLLMQALN 516


>gi|88813439|ref|ZP_01128675.1| N-acetylmuramoyl-L-alanine amidase, putative [Nitrococcus mobilis
           Nb-231]
 gi|88789310|gb|EAR20441.1| N-acetylmuramoyl-L-alanine amidase, putative [Nitrococcus mobilis
           Nb-231]
          Length = 236

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 6/74 (8%)

Query: 95  PELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P +P      L L      V  L+  L  +G +    G    F     +AV+ FQ    L
Sbjct: 160 PTVPRPTEPLLRLMARGQPVLHLQAMLSRAGHILEEDG---IFGQNTLAAVQAFQRSQDL 216

Query: 152 DPSGMVDSSTLEAM 165
              G+V   T  A+
Sbjct: 217 KADGIVGPRTWTAL 230


>gi|255020594|ref|ZP_05292657.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
 gi|254969979|gb|EET27478.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
          Length = 306

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 55/172 (31%), Gaps = 47/172 (27%)

Query: 189 QKMGLRYVLVNIPAASLEAV---ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                + +++N+ A  L      +NGKV +   + +GR   +TP+  +++   + +P W 
Sbjct: 90  PDAPRQGIVINLAAMRLFYYPEGKNGKVVVSYPLGIGREGWRTPLGKTQVTGKVKDPTWT 149

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P SI                          +  E+  + V                G  
Sbjct: 150 PPASI---------------------RAEHAEKGEILPDVV--------------PAGPQ 174

Query: 306 NAMASTKIEF--YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           N +    +            H T +P      +R  + GC+R+    D+   
Sbjct: 175 NPLGQYALRLGWP-GYLI--HGTDKPW--GVGMR-VSHGCIRL-YPEDIAKL 219


>gi|148979384|ref|ZP_01815490.1| putative general secretion pathway protein A [Vibrionales bacterium
           SWAT-3]
 gi|145961820|gb|EDK27113.1| putative general secretion pathway protein A [Vibrionales bacterium
           SWAT-3]
          Length = 546

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 7/83 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W +     L  G    +V  L    ++S  L      S  FD  ++  V+ FQ   G+  
Sbjct: 458 WKQPLRETLKEGYQGEAVALLDL--LLSEVLGEVVSGSDVFDYELKMKVEAFQTWQGMSV 515

Query: 154 SGMVDSSTLEAMNVPVDLRIRQL 176
            G+    TL  +      R+ QL
Sbjct: 516 DGIAGQRTLARL-----QRLAQL 533


>gi|158321567|ref|YP_001514074.1| peptidoglycan binding domain-containing protein [Alkaliphilus
           oremlandii OhILAs]
 gi|158141766|gb|ABW20078.1| Peptidoglycan-binding domain 1 protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 198

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+S   V RL+  L+ +G       +   F +   SAV  FQ    +   G+V   T
Sbjct: 71  LSMGSSGPDVTRLQHLLMSAGY--NPGPIDGIFGSMTHSAVMAFQRDSHIAVDGIVGPRT 128

Query: 162 LEAMNV 167
             A+ V
Sbjct: 129 WTALGV 134


>gi|257053977|ref|YP_003131810.1| Peptidoglycan-binding domain 1 protein [Halorhabdus utahensis DSM
           12940]
 gi|256692740|gb|ACV13077.1| Peptidoglycan-binding domain 1 protein [Halorhabdus utahensis DSM
           12940]
          Length = 864

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG    +VQ+L+E L   G       +   +      AV  FQ   GL+P+G V   T
Sbjct: 3   LTLGADGEAVQQLQELLAERGY--DVGEIDGEYGRRTRDAVASFQREQGLEPTGSVGPDT 60

Query: 162 LEAMNVPVD 170
            E +++ VD
Sbjct: 61  AEELDLDVD 69


>gi|253702665|ref|YP_003023854.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
 gi|251777515|gb|ACT20096.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
          Length = 409

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 17/102 (16%)

Query: 189 QKMGLRYVLVNIPAASLEAVE---NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                + +++N+    L   +    G+V     V VG  +R TP    R+ R    P W 
Sbjct: 88  PDAPRKGIVINLATMRLFRFKEDSKGQVVSTYPVGVGTAERPTPTGKMRVERKTALPTWY 147

Query: 246 IPRSII-----QKDMMA-LLRQDPQ--------YLKDNNIHM 273
           +P SI      + D++   +   P+        YL      +
Sbjct: 148 VPASIAEDHKKKGDLLPAKVPPGPENPLGERALYLSKAGYLI 189


>gi|148359132|ref|YP_001250339.1| hypothetical protein LPC_1022 [Legionella pneumophila str. Corby]
 gi|296107181|ref|YP_003618881.1| hypothetical protein lpa_02313 [Legionella pneumophila 2300/99
           Alcoy]
 gi|148280905|gb|ABQ54993.1| hypothetical protein LPC_1022 [Legionella pneumophila str. Corby]
 gi|295649082|gb|ADG24929.1| Hypothetical protein lpa_02313 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 244

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L   +  + +++N+    L     +  V +   V +G+   +TP+  SRI     NP
Sbjct: 88  RFILP-NVPRKGIVINLAEYRLYYFPPDDNVVMTYPVGIGKKGWETPLGLSRITSKEINP 146

Query: 243 YWV 245
            W 
Sbjct: 147 TWR 149


>gi|309389108|gb|ADO76988.1| cell wall hydrolase SleB [Halanaerobium praevalens DSM 2228]
          Length = 229

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+  + V  L++RL        S  +   +      AVK FQ   GL   G+     
Sbjct: 39  MQSGDEGIDVAVLQQRLKKLNYYVGS--VDGIYGQATIEAVKKFQADKGLPVDGVFGQRA 96

Query: 162 LE 163
           L+
Sbjct: 97  LK 98


>gi|315150422|gb|EFT94438.1| peptidase [Enterococcus faecalis TX0012]
          Length = 477

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV  FQ ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDFQQKNGLPVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|295314762|gb|ADF97531.1| PlyM6 [uncultured phage]
          Length = 357

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +  +V+ L+  L  +G L    G    F    E+AVK FQ  +GL   G+  + +   
Sbjct: 221 GVTGAAVKTLQSELKQAGFLLSVDG---VFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 277

Query: 165 MN 166
           +N
Sbjct: 278 LN 279


>gi|251779050|ref|ZP_04821970.1| peptidoglycan-binding domain 1 protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243083365|gb|EES49255.1| peptidoglycan-binding domain 1 protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 791

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 27/131 (20%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P  PL L + + +V+ ++++L         +      +  FD   E AVK+FQ    L  
Sbjct: 321 PGTPLRLNDENNNVKVIQKQLNRISKNFPAIPKIPYENGKFDKITEDAVKVFQKVFNLTQ 380

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL----------LEQKMGLRYVLVNIPAA 203
            G+V  +T          RI  + V + R+ +L               G  Y     P  
Sbjct: 381 DGIVGRATWY--------RISSIYVGVKRLAELDQEPEIDGENPPPDSGGEY-----PGY 427

Query: 204 SLEAVENGKVG 214
            L+    G+  
Sbjct: 428 LLKYGSRGEKV 438



 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 16/134 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERLII--SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L  G+    V+ ++  L +       P+      F    + AV  FQ   GL P G
Sbjct: 425 PGYLLKYGSRGEKVKEVQNYLSVISKSYNIPNIKADGIFGQMTKDAVIAFQRLFGLAPDG 484

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           ++  +T    N    +    ++    +    L ++   +Y     P   L     G+   
Sbjct: 485 IIGINTW---NKIYYVYKDLIKGTAQQD---LNEEFDGKY-----PGYLLSYGSKGEKVR 533

Query: 216 RSTV---IVGRVDR 226
                  +V +   
Sbjct: 534 EMQTYLSVVSKSYN 547



 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L LG+    V+  +     L  +  +      +  FD   E++VK  Q + GL  +
Sbjct: 703 PGFDLELGDQDGYVKVFQMYVNVLAKNNYISSQIEENGVFDKRTENSVKELQEKFGLKVT 762

Query: 155 GMVDSSTL 162
           G+VD  T 
Sbjct: 763 GVVDKITW 770



 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG--DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L  G+    V+ ++  L +       PS      F     +AV  FQ   GL   G
Sbjct: 519 PGYLLSYGSKGEKVREMQTYLSVVSKSYNIPSINADGIFGDMTRNAVLSFQRLFGLAQDG 578

Query: 156 MVDSSTLE 163
           +V  +T  
Sbjct: 579 VVGLNTWN 586


>gi|297610914|ref|NP_001065361.2| Os10g0557900 [Oryza sativa Japonica Group]
 gi|14165321|gb|AAK55453.1|AC069300_8 putative metalloproteinase [Oryza sativa Japonica Group]
 gi|31433475|gb|AAP54980.1| Matrixin family protein, expressed [Oryza sativa Japonica Group]
 gi|255679626|dbj|BAF27198.2| Os10g0557900 [Oryza sativa Japonica Group]
          Length = 355

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 105 GNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    +  L+  L   G +  P +  + AFD ++E AV+ +Q R  L  +G +D++TL+
Sbjct: 48  GSHVTGLAELKRYLARFGYMAKPGRDTTDAFDEHLEVAVRRYQTRFSLPVTGRLDNATLD 107

Query: 164 AM 165
            +
Sbjct: 108 QI 109


>gi|269967430|ref|ZP_06181490.1| putative general secretion pathway protein A [Vibrio alginolyticus
           40B]
 gi|269828018|gb|EEZ82292.1| putative general secretion pathway protein A [Vibrio alginolyticus
           40B]
          Length = 538

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L L     +++ L +RL+    +      +  FD  ++  V+LFQ   G+   G+    
Sbjct: 457 TLRLDMEGPAIEVL-DRLLAE-AVSEPLLETSIFDGAMKERVELFQRWQGIGVDGIAGKR 514

Query: 161 TLEAMNVPVDLRIRQLQ 177
           TL+ +   V     QL 
Sbjct: 515 TLDRLQQNVQPDAPQLA 531


>gi|298250948|ref|ZP_06974752.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
 gi|297548952|gb|EFH82819.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
          Length = 317

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP         G+S  +V+ ++  L+  G    S  +   F +   S VK FQ  +GL  
Sbjct: 49  WPT-----YQSGSSGENVRSIQYMLVQRGY---SLTVDGQFGSGTASVVKSFQSTNGLSV 100

Query: 154 SGMVDSSTLEAMNVPVD 170
            G+V   T E + V   
Sbjct: 101 DGIVGPQTWEKLIVTTQ 117



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 3/61 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V  L+ +L   G    S     AF    ESAVK FQ   GL   G+    T   
Sbjct: 119 GSNGSAVTTLQRQLNAHG---ASLTTDGAFAPATESAVKSFQSSKGLSADGIAGLDTWSQ 175

Query: 165 M 165
           +
Sbjct: 176 L 176


>gi|91228363|ref|ZP_01262290.1| putative general secretion pathway protein A [Vibrio alginolyticus
           12G01]
 gi|91188062|gb|EAS74367.1| putative general secretion pathway protein A [Vibrio alginolyticus
           12G01]
          Length = 538

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L L     +++ L +RL+    +      +  FD  ++  V+LFQ   G+   G+    
Sbjct: 457 TLRLDMEGPAIEVL-DRLLAE-AVSEPLLETSIFDGAMKERVELFQRWQGIGVDGIAGKR 514

Query: 161 TLEAMNVPVDLRIRQLQ 177
           TL+ +   V     QL 
Sbjct: 515 TLDRLQQNVQPDAPQLA 531


>gi|86158711|ref|YP_465496.1| ErfK/YbiS/YcfS/YnhG like protein [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775222|gb|ABC82059.1| ErfK/YbiS/YcfS/YnhG like protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 285

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 51/163 (31%), Gaps = 44/163 (26%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +L        ++VN+    L  +   G   +   V +G+   +TP+    +      P 
Sbjct: 77  WILPPSAAPGSIVVNLSEMRLYLLPGGGAAPVTYPVGIGKDRAKTPLGSFTVIGKTVAPT 136

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P S+ + D                                       P    R  PG
Sbjct: 137 WYPPASMRRDD---------------------------------------PTLPDRVPPG 157

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
             N + +  +   S  +  +H T EP  F  + R  + GCVR+
Sbjct: 158 PDNPLGTHALRL-SAGSILIHGTDEP--FG-IGRKFSHGCVRL 196


>gi|21230048|ref|NP_635965.1| hypothetical protein XCC0573 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769959|ref|YP_244721.1| hypothetical protein XC_3660 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21111570|gb|AAM39889.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575291|gb|AAY50701.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 308

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               A+      AVK FQ  HGL   G+V   TL+A+
Sbjct: 139 NADGAYGQRTGEAVKAFQRAHGLQEDGVVGGDTLKAL 175


>gi|295314760|gb|ADF97530.1| PlyM5 [uncultured phage]
          Length = 284

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L    G    F    E+AVK FQ  +GL   G+  + +   
Sbjct: 221 GDTGAAVKTLQSELKQAGFLLSVDG---IFGKGTETAVKAFQRGNGLVVDGVFGTGSQAK 277

Query: 165 MN 166
           +N
Sbjct: 278 LN 279


>gi|125532922|gb|EAY79487.1| hypothetical protein OsI_34615 [Oryza sativa Indica Group]
 gi|125575664|gb|EAZ16948.1| hypothetical protein OsJ_32430 [Oryza sativa Japonica Group]
          Length = 337

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 105 GNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    +  L+  L   G +  P +  + AFD ++E AV+ +Q R  L  +G +D++TL+
Sbjct: 30  GSHVTGLAELKRYLARFGYMAKPGRDTTDAFDEHLEVAVRRYQTRFSLPVTGRLDNATLD 89

Query: 164 AM 165
            +
Sbjct: 90  QI 91


>gi|321314327|ref|YP_004206614.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis BSn5]
 gi|320020601|gb|ADV95587.1| N-acetylmuramoyl-L-alanine amidase; skin element [Bacillus subtilis
           BSn5]
          Length = 273

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
               S +V++++  L         K    G+   +      A++ FQ+ +GL+P G+   
Sbjct: 203 PLMHSAAVEQIQTALAALHFYPDKKAKNFGIDSYYGPKTADAIRRFQLMNGLNPDGIYGP 262

Query: 160 STLE 163
            T  
Sbjct: 263 ETKA 266


>gi|289667240|ref|ZP_06488315.1| hypothetical protein XcampmN_01617 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 427

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 5/69 (7%)

Query: 101 PLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            L  G     V++L+ +L   G    D  P       F    + AV+ FQ   GL   G+
Sbjct: 211 KLEQGERGEQVKQLQSQLAQLGAVGCDGKPPHADGD-FGGNTKYAVEQFQRERGLQVDGV 269

Query: 157 VDSSTLEAM 165
           V S    A+
Sbjct: 270 VGSQAQAAL 278


>gi|288921194|ref|ZP_06415480.1| cell wall hydrolase/autolysin [Frankia sp. EUN1f]
 gi|288347401|gb|EFC81692.1| cell wall hydrolase/autolysin [Frankia sp. EUN1f]
          Length = 428

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +  FD  +++AV+ FQ   GL   G++   T  A+
Sbjct: 87  TADLFDRELDNAVRAFQQSRGLSVDGIIGPDTFRAI 122



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)

Query: 108 SVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              V  L+ERL   G D+  + G    F A  + AV+ FQ   GLDP G+    TL  +
Sbjct: 144 GDDVTALQERLSNMGFDVGRADG---IFGARTDVAVRDFQRNRGLDPDGLCGPRTLREL 199


>gi|186683324|ref|YP_001866520.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186465776|gb|ACC81577.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 126

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 7/108 (6%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           +P       AQT  A+A          +       L  G+   +V+ ++  L   G  + 
Sbjct: 24  LPFSFAPAKAQTNNALA-----ARFSKYSPTKAPFLAPGSRGQAVRDVQAALQRLGFYNG 78

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           +  +   + +   +AV  FQ  H +   G V + T +A+   +  R R
Sbjct: 79  A--VDGIYGSRTATAVATFQRSHRIVGDGRVGALTWQALRSSIAPRRR 124


>gi|284990257|ref|YP_003408811.1| peptidoglycan-binding domain 1 protein [Geodermatophilus obscurus
           DSM 43160]
 gi|284063502|gb|ADB74440.1| Peptidoglycan-binding domain 1 protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 224

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 32/64 (50%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG++  +V+RL+E L       P   +   F    ++ V+ FQ R GL   G+V  +T
Sbjct: 159 LRLGSTGDAVRRLQETLNRWYPSLPPLAVDGDFGPRTDARVRYFQGRAGLVADGIVGPAT 218

Query: 162 LEAM 165
             A+
Sbjct: 219 WRAL 222


>gi|167629767|ref|YP_001680266.1| peptidoglycan binding domain 1, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167592507|gb|ABZ84255.1| peptidoglycan binding domain 1, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 230

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+   R L+ G S   VQ+L+  L   G        +  F A    A+K FQ    L   
Sbjct: 29  PQFGSRQLYRGVSGADVQQLQGYLKEMGYFAEEP--TGYFGAITFDALKQFQAYRDLIID 86

Query: 155 GMVDSSTLEAM 165
           G+    T +A+
Sbjct: 87  GVAGPQTFKAL 97


>gi|308535396|ref|YP_002140776.2| peptidoglycan L,D-transpeptidase lipoprotein [Geobacter
           bemidjiensis Bem]
 gi|308052741|gb|ACH40980.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, SPOR
           domain-containing protein [Geobacter bemidjiensis Bem]
          Length = 440

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 17/102 (16%)

Query: 189 QKMGLRYVLVNIPAASL-EAVENGK--VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                + +++N+    L    E+GK  V     V VG  +R TP    RI R    P W 
Sbjct: 119 PDAPRKGIVINLATMRLFRFKEDGKAQVVSTYPVGVGTAERPTPTGKMRIERKTALPTWH 178

Query: 246 IPRSII-----QKDMMA-LLRQDPQ--------YLKDNNIHM 273
           +P SI      + D++   +   P+        YL      +
Sbjct: 179 VPASIAEDHRKKGDLLPAKVPPGPENPLGERALYLSKAGYLI 220


>gi|312136042|ref|YP_004003380.1| carboxyl-terminal protease [Caldicellulosiruptor owensensis OL]
 gi|311776093|gb|ADQ05580.1| carboxyl-terminal protease [Caldicellulosiruptor owensensis OL]
          Length = 472

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +    G+  + +   ++RL   G L      +   D     AV+ FQ  + L PSG++D
Sbjct: 381 TKKFKKGDMDLEILAAQQRLFYLGYLS---SWTAKMDDNTVVAVQKFQKDNKLYPSGILD 437

Query: 159 SSTLEAMN 166
            +T + +N
Sbjct: 438 ITTQKKLN 445


>gi|23100367|ref|NP_693834.1| N-acetylmuramoyl-L-alanine amidase [Oceanobacillus iheyensis
           HTE831]
 gi|22778600|dbj|BAC14868.1| N-acetylmuramoyl-L-alanine amidase [Oceanobacillus iheyensis
           HTE831]
          Length = 938

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           E+ +A  +++ S   +         LG+   ++  ++E+L   G        +  F  + 
Sbjct: 260 ERTLAKLEELASTDVF--------ELGDRHNAIIIIKEKLNAIGF--GGISETNYFGGWT 309

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           E+ VK FQ  +GL   G V  +T E +
Sbjct: 310 ETRVKQFQQYYGLSVDGKVGPATQETL 336



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           E+   PL  G S   V  ++E L   G       +S  F  + E+ +K FQ  + L  SG
Sbjct: 685 EIYNSPLQKGKSDSRVIEMKEMLNALGY--DGITISDYFGNWTETRLKQFQSDYNLPVSG 742

Query: 156 MVDSSTLEAMNVPV 169
           + D+ T++ ++  V
Sbjct: 743 IADTKTIQKLDDSV 756



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +   P   G      + ++E+L   G       ++  F  Y+ES VK FQ   GL  +G
Sbjct: 199 SVYNSPFQNGKRHEDTKAIKEKLNSIGY--GPITVTTLFGNYMESQVKEFQRDQGLRVNG 256

Query: 156 MVDSSTLEAM 165
           + D  TL  +
Sbjct: 257 IADERTLAKL 266



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           E+   P   G        L+E+L   G       +S  +  Y +S VK FQ   GL  +G
Sbjct: 477 EVYNSPFQAGKRHEDTIELKEKLNRLGY--GHITVSTLYGNYTKSQVKEFQRDFGLVVNG 534

Query: 156 MVDSSTLEAMN 166
           + D +T   +N
Sbjct: 535 IADENTWIKLN 545



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +   P   G      + ++E+L   G       ++  F  Y+ES VK FQ   GL  +G
Sbjct: 338 SVYNSPFQNGKRHEDTKAIKEKLNSIGY--GPITVTTLFGNYMESQVKEFQRDQGLRENG 395

Query: 156 MVDSSTLEAM 165
           + D+ TL  +
Sbjct: 396 IADAPTLAKL 405



 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           ++   P   G        L+E+L   G       +S  + ++ ES VK FQ  +GL  +G
Sbjct: 616 DVYNSPYQNGKRHDGTIELKEKLNRIGF--GYITVSTLYGSFTESQVKKFQEYYGLKVNG 673

Query: 156 MVDSSTLEAMN 166
           + D  T++ +N
Sbjct: 674 IADEVTMDMIN 684



 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 18/157 (11%)

Query: 30  PIHASVLDEIINESYHSIVNDR----FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
               + LDE+ N  + +             L R+  G  +   +    T +Q ++    +
Sbjct: 469 EATQNKLDEVYNSPFQAGKRHEDTIELKEKLNRLGYGHITVSTLYGNYTKSQVKEFQRDF 528

Query: 86  ----QDILSRGGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
                 I     W +L          LG+    +  ++++L   G        +  F  +
Sbjct: 529 GLVVNGIADENTWIKLNEVYYKTGFQLGDRHEDIIEIKKQLNAIGF--GGITETNYFGKW 586

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAM----NVPVD 170
            E+ V+ FQ  +GL  +G  D  T + +    N P  
Sbjct: 587 TETRVEQFQRYYGLSVTGTADEQTQQKLSDVYNSPYQ 623



 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 16/150 (10%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPI----ISKETIAQTEKAIAF 84
            P     LD + N  + +      D    +  +      PI    +    +    K    
Sbjct: 329 GPATQETLDSVYNSPFQNGKRHE-DTKAIKEKLNSIGYGPITVTTLFGNYMESQVKEFQR 387

Query: 85  YQDILSRG--GWPEL-------PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
            Q +   G    P L             LG+   ++  ++++L   G        +  F 
Sbjct: 388 DQGLRENGIADAPTLAKLEELASTDVFELGDRHSAIITIKQKLNAIGF--DRISETDYFG 445

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            + E+ V+ FQ  + L+ +G  D +T   +
Sbjct: 446 GWTETRVRQFQEYYNLNVTGKADEATQNKL 475



 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           P   G+    +  ++E+L   G        +  F  + E+ V  FQ  + L  +G VD  
Sbjct: 135 PYEKGDRHEDLVEIKEKLNHIGF--DGITETDYFGNWTETRVTQFQTYYQLSVTGKVDQK 192

Query: 161 TLEAM 165
           T+  +
Sbjct: 193 TINKL 197


>gi|186685970|ref|YP_001869166.1| glycoside hydrolase family protein [Nostoc punctiforme PCC 73102]
 gi|186468422|gb|ACC84223.1| glycoside hydrolase, family 25 [Nostoc punctiforme PCC 73102]
          Length = 263

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+S + V++L+++L   G    +  +   F   V++A+  FQ    L   G+V   T
Sbjct: 199 LQLGDSGLRVKQLQQQLKDIGLY--TDAIDGKFSESVKNAIVSFQTSKKLQADGIVGIKT 256

Query: 162 LEAM 165
             A+
Sbjct: 257 WVAL 260


>gi|159898672|ref|YP_001544919.1| peptidoglycan binding domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159891711|gb|ABX04791.1| Peptidoglycan-binding domain 1 protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 306

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 55/161 (34%), Gaps = 5/161 (3%)

Query: 5   LKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGID 64
           +K        F  +      S+      ++     I++             L     G+ 
Sbjct: 1   MKALVWRIASFTLIFGITLGSIGSAQAFSAAFFHTISKGNRGTDVKAMQYLLNISADGVF 60

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
                 S ++   +    A    I+    W  L I  +  G++  +V+ ++  L      
Sbjct: 61  GSGTESSVKSFQSSRGLGAD--GIVGPNTWNAL-IVTVRRGDNGNAVKAVQTLLNAK--R 115

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +    +  AF A  ESAVK FQ   GL   G+V  +T + +
Sbjct: 116 NAGLTVDGAFGAGTESAVKSFQSHAGLSADGVVGPTTWKNL 156



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 15/89 (16%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  GN    V+ ++  L IS D          F +  ES+VK FQ   GL   G+V  +
Sbjct: 35  TISKGNRGTDVKAMQYLLNISAD--------GVFGSGTESSVKSFQSSRGLGADGIVGPN 86

Query: 161 TLEAMNVPV-------DLRIRQLQVNLMR 182
           T  A+ V V        ++  Q  +N  R
Sbjct: 87  TWNALIVTVRRGDNGNAVKAVQTLLNAKR 115


>gi|56413653|ref|YP_150728.1| LysM domain-containing protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362577|ref|YP_002142214.1| LysM domain [Salmonella enterica subsp. enterica serovar Paratyphi
           A str. AKU_12601]
 gi|56127910|gb|AAV77416.1| putative LysM domain [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197094054|emb|CAR59552.1| putative LysM domain [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 333

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        V+VN+    L     G+       + +G    +TP++ +RI + + NP W
Sbjct: 88  MLLPDAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPMW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +            +                G 
Sbjct: 148 TPTAGIRQRSL------------ERGITL---------PPVI--------------PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|328884589|emb|CCA57828.1| putative lipoprotein [Streptomyces venezuelae ATCC 10712]
          Length = 339

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 4/126 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL-E 163
           G+ +  V+ L+ RL   G  D +   +  +     ++VK FQ + GL  +G VD++T   
Sbjct: 137 GDETEQVRELQARLRQLGHFDRAP--TGFYGTMTAASVKAFQKKQGLPRTGSVDATTWER 194

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            +         +L+ +        + + +  R + ++  + +L  + +GKV     V  G
Sbjct: 195 LLGASRKPTADELKPSTTNKLDTPDARCLTGRVLCISKESRTLAWMIDGKVVSSMDVRFG 254

Query: 223 RVDRQT 228
             +  T
Sbjct: 255 SENTPT 260


>gi|297204538|ref|ZP_06921935.1| predicted protein [Streptomyces sviceus ATCC 29083]
 gi|297148725|gb|EFH29093.1| predicted protein [Streptomyces sviceus ATCC 29083]
          Length = 509

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V  L+  LI  G +    G    F A   SAV+ FQ  HGL   G V ++T
Sbjct: 113 LVQGAKGGCVTELQRLLIHHGYVVDVDGD---FGAGTASAVRSFQSAHGLTVDGQVGTNT 169

Query: 162 LEAM 165
             A+
Sbjct: 170 KRAL 173



 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   V  L+  L   G    S  +  +F     +AVK FQ   GL   G V  +T  A
Sbjct: 198 GQSGGCVATLQSLLNGKGH---SLDVDGSFGPQTLAAVKAFQSASGLSADGEVGPNTKAA 254

Query: 165 M 165
           +
Sbjct: 255 L 255



 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G  S  V  L+  L   G       +   F    +SAV+ FQ   GL   G V  +T  A
Sbjct: 285 GQHSGCVTELQSLLNHHG---ADLAVDGDFGPLTDSAVRDFQSEKGLSVDGQVGPNTKAA 341

Query: 165 M 165
           +
Sbjct: 342 L 342


>gi|289579414|ref|YP_003478041.1| carboxyl-terminal protease [Thermoanaerobacter italicus Ab9]
 gi|289529127|gb|ADD03479.1| carboxyl-terminal protease [Thermoanaerobacter italicus Ab9]
          Length = 456

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 60/180 (33%), Gaps = 35/180 (19%)

Query: 3   GYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG 62
            YL   K      +         ++   I  + +  ++ E                    
Sbjct: 272 SYLNNPKYRLAVLINGNTASAAEILAGAIQDTKVGILVGEKSFG-------------KGT 318

Query: 63  IDSDIPIISKETIAQTEKAIAFY-----QDILSRGGWPELPI------------RPLHLG 105
           + S +P+        T   IA Y     + I  +G  P++ +              L +G
Sbjct: 319 VQSVVPLPDGSGFKLT---IARYKLPSGRYIDKQGLKPDIYVASTQYTPSIKFNGTLKVG 375

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +    V+ L++ L I      +      F     +AVK  Q + GL P+G+ D +T +AM
Sbjct: 376 SKGNDVKILQKHLNILKF--NAGPEDGIFGPKTANAVKKLQKKAGLTPTGVFDKNTYDAM 433


>gi|284034144|ref|YP_003384075.1| Zinc D-Ala-D-Ala carboxypeptidase [Kribbella flavida DSM 17836]
 gi|283813437|gb|ADB35276.1| Zinc D-Ala-D-Ala carboxypeptidase [Kribbella flavida DSM 17836]
          Length = 255

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G S   V++L+ R+              AF    ++AV  FQ  +GL   G+  
Sbjct: 48  SRTLSEGASGEDVRQLQVRVAGYPGYGGHLAADGAFGPATKAAVTRFQQAYGLAADGIAG 107

Query: 159 SSTLEAM 165
           S+T   +
Sbjct: 108 SATFSKL 114


>gi|320157464|ref|YP_004189843.1| general secretion pathway protein A/General secretion pathway
           protein B [Vibrio vulnificus MO6-24/O]
 gi|319932776|gb|ADV87640.1| general secretion pathway protein A / General secretion pathway
           protein B [Vibrio vulnificus MO6-24/O]
          Length = 718

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP      L LG    ++  L + L  +  L+     +  F+A +   V+ FQ    +  
Sbjct: 456 WPMPLRETLRLGMHGEAIAVLDQLLAKA--LNDEPLKTTQFNAELMQRVEWFQRWQAMTE 513

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 514 DGIAGQRTLARL 525


>gi|311279432|ref|YP_003941663.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
 gi|308748627|gb|ADO48379.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
          Length = 333

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 40/163 (24%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL   +  + ++VN+    L     +G+      + +G++   TP + +R+ + + NP W
Sbjct: 88  LLLPDVPRKGIVVNLAELRLYYFPPDGRSVQVYPLGIGQLGLATPEMTTRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                    E+G  +                     G 
Sbjct: 148 TPTPGIRQRSL--------------------ERGVSLPPVV---------------PAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
            N +    +     +  Y +H T  P    +V    +SGC+R+
Sbjct: 173 NNPLGRYALRLAYGSGEYLIHGTNAPS---SVGLRVSSGCMRM 212


>gi|116747924|ref|YP_844611.1| ErfK/YbiS/YcfS/YnhG family protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116696988|gb|ABK16176.1| ErfK/YbiS/YcfS/YnhG family protein [Syntrophobacter fumaroxidans
           MPOB]
          Length = 321

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 63/216 (29%), Gaps = 56/216 (25%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            +      R +++N+P   +   +  G       + +G    ++PI    I     NP W
Sbjct: 102 WVLPPTQHRQLVINVPELRIYFFDKSGNAVQTYPIGIGDEGWESPIGTFSITEKRPNPTW 161

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            IP S+ +K  MA +                                          PG 
Sbjct: 162 YIPASLQEKYGMAQM-----------------------------------------PPGP 180

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +             Y +H T  P     V R  + GC+R      + +   +    +
Sbjct: 181 ENPLGE--FMMKFSAGAYGVHGTAMPW---GVGRLVSHGCIRC-YPEHIRILYPQVPVGY 234

Query: 364 SRYHIEEVVKTR-KTTPV------KLATEVPVHFVY 392
               I E +K   K   V       +  ++P +  Y
Sbjct: 235 KLEMIYEPIKFGQKNGQVFVEAHPDVYRKIPDYIQY 270


>gi|169634237|ref|YP_001707973.1| putative phage-related cell wall hydrolase [Acinetobacter baumannii
           SDF]
 gi|169153029|emb|CAP02090.1| putative phage-related cell wall hydrolase [Acinetobacter
           baumannii]
          Length = 276

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+   +V  L+ +L   G    +     +   F    E AV  FQ + GL   G V 
Sbjct: 3   LKFGSKGTAVVTLQRQLAGMGYKGKTGKVLSIDGIFGESTEYAVIQFQKKVGLVADGKVG 62

Query: 159 SSTLEAM 165
             T EA+
Sbjct: 63  DKTREAL 69


>gi|192361798|ref|YP_001981559.1| general secretion pathway protein a [Cellvibrio japonicus Ueda107]
 gi|190687963|gb|ACE85641.1| general secretion pathway protein a [Cellvibrio japonicus Ueda107]
          Length = 587

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L LG+    V  + E+     D  P+      +   +++ V+LFQ  H + P G+   
Sbjct: 491 GVLQLGDQGPLVTWVAEQFARL-DKQPAPLTRQYYTDKLKTRVELFQASHKMVPDGIFGV 549

Query: 160 STLEAMN 166
            TL  +N
Sbjct: 550 QTLRRLN 556


>gi|23752338|ref|NP_705653.1| gp27 [Burkholderia phage Bcep781]
 gi|47842850|ref|NP_958132.2| gp27 [Burkholderia phage Bcep43]
 gi|23507205|gb|AAN38028.1| gp27 [Burkholderia phage Bcep781]
 gi|47719038|gb|AAR89318.2| gp27 [Burkholderia phage Bcep43]
          Length = 255

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 8/67 (11%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +G S  +V  L+ RL +          S  FDA V +A++ +Q  HG+ P G+  
Sbjct: 2   AAPLIVGASGRAVVFLQARLGL--------AQSGQFDASVATALRQWQEAHGMTPDGVYG 53

Query: 159 SSTLEAM 165
           S T   M
Sbjct: 54  SQTNAVM 60


>gi|20807964|ref|NP_623135.1| peptidoglycan-binding domain-containing protein [Thermoanaerobacter
           tengcongensis MB4]
 gi|20516536|gb|AAM24739.1| putative peptidoglycan-binding domain-containing protein
           [Thermoanaerobacter tengcongensis MB4]
          Length = 77

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            EL  R L+ G +   V  L+  L   G       +   F    + AV  FQ  +GL   
Sbjct: 4   QELGSRLLYEGLAGYDVLELQMILQSLGY--DPGPIDGIFGPRTKKAVMKFQRDNGLKVD 61

Query: 155 GMVDSSTLE 163
           G+V   T++
Sbjct: 62  GIVGPETMK 70


>gi|315644947|ref|ZP_07898075.1| spore cortex-lytic enzyme [Paenibacillus vortex V453]
 gi|315279658|gb|EFU42960.1| spore cortex-lytic enzyme [Paenibacillus vortex V453]
          Length = 197

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+ +  V  L+ RL        ++ L   + A  ++AV  FQ  +G+   G+  + T
Sbjct: 14  LKPGSENGDVWDLQYRLKTLDFY--TQPLDGKYGANTKAAVTRFQKEYGVPADGITGAQT 71

Query: 162 LEAM 165
              +
Sbjct: 72  WRQL 75


>gi|256752603|ref|ZP_05493457.1| SpoIID/LytB domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748541|gb|EEU61591.1| SpoIID/LytB domain protein [Thermoanaerobacter ethanolicus CCSD1]
          Length = 487

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    R +  G++   V+ L+  L   G    +K ++  +D    +AV  FQ  + L   
Sbjct: 28  PSGFSRNMKKGDTGDDVKLLQTLLKEIGYY--TKDITGTYDDNTLNAVMDFQKYYSLAVD 85

Query: 155 GMVDSSTL 162
           G+   +T+
Sbjct: 86  GIAGINTI 93


>gi|290960881|ref|YP_003492063.1| peptidodoglycan-binding membrane protein [Streptomyces scabiei
           87.22]
 gi|260650407|emb|CBG73523.1| putative peptidodoglycan-binding membrane protein [Streptomyces
           scabiei 87.22]
          Length = 379

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 6/70 (8%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS----G 155
           + L  G+    V  L+ RL   G       +   +D+ VE AV ++Q   G+       G
Sbjct: 305 KTLRPGDDDPEVTELQLRLSQLGIYTG--DIDDNYDSQVEQAVLVYQSSRGITKDQDEPG 362

Query: 156 MVDSSTLEAM 165
           +    T E +
Sbjct: 363 VYGLVTRERL 372


>gi|188993173|ref|YP_001905183.1| hypothetical protein xccb100_3778 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734933|emb|CAP53145.1| Conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 632

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               A+      AVK FQ  HGL   G+V   TL+A+
Sbjct: 463 NADGAYGQRTGEAVKAFQRAHGLQEDGVVGGDTLKAL 499


>gi|114707493|ref|ZP_01440389.1| N-acetylmuramoyl-L-alanine amidase [Fulvimarina pelagi HTCC2506]
 gi|114537052|gb|EAU40180.1| N-acetylmuramoyl-L-alanine amidase [Fulvimarina pelagi HTCC2506]
          Length = 258

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 31/92 (33%), Gaps = 7/92 (7%)

Query: 80  KAIAFYQDILSRGGWPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSK---GLSVA 133
            A A Y+ +L R   P L       L  G     V   R  L I  D            A
Sbjct: 128 DATAEYKGLLGRAA-PVLDAMADEILERGERGPDVAAWRRDLDIWRDRIAHPWGMPDGDA 186

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           FD  VE A   FQ   G+   G V   T E M
Sbjct: 187 FDHTVELATLHFQKTRGIVADGKVGPQTREEM 218


>gi|37678756|ref|NP_933365.1| putative general secretion pathway protein A [Vibrio vulnificus
           YJ016]
 gi|37197497|dbj|BAC93336.1| putative general secretion pathway protein A [Vibrio vulnificus
           YJ016]
          Length = 718

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP      L LG    ++  L + L  +  L+     +  F+A +   V+ FQ    +  
Sbjct: 456 WPMPLRETLRLGMHGEAIAVLDQLLAKA--LNDEPLKTTQFNAELMQRVEWFQRWQAMTE 513

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 514 DGIAGQRTLARL 525


>gi|118579012|ref|YP_900262.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
 gi|118501722|gb|ABK98204.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
          Length = 441

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 55/178 (30%), Gaps = 61/178 (34%)

Query: 184 KKLLE-----QKMGLRYVLVNIPAASLEAVENG---KVGLRSTVIVGRVDRQTPILHSRI 235
           + LL           + +++N+    L   +     +V     V VG  DR TP   +R+
Sbjct: 109 RILLPLSFILPDAPRKGIVINLATMRLFHYKGSGTAQVVSTYPVGVGAEDRPTPPGPTRV 168

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
            R    P W +P SI                + + +        ++    +         
Sbjct: 169 VRKAAKPTWHVPASIA---------------ERHRMK------GDILPASI--------- 198

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTY-------MHDTPEPILFNNVVRFETSGCVRV 346
                 PG  N +             Y       +H T +P    +V    T+GC+R+
Sbjct: 199 -----PPGPDNPLG--------EYALYLGKAGYLIHGTNKP---ASVGLQATNGCMRL 240


>gi|309811331|ref|ZP_07705118.1| NlpC/P60 family protein [Dermacoccus sp. Ellin185]
 gi|308434638|gb|EFP58483.1| NlpC/P60 family protein [Dermacoccus sp. Ellin185]
          Length = 350

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+ ++ +L ++ D          F     SAVK FQ  +GL   G+V   T
Sbjct: 53  LFFGSRGEAVKAIQAQLQVNAD--------GIFGPATLSAVKSFQRSNGLYADGIVGKLT 104

Query: 162 LEAM 165
              +
Sbjct: 105 WAKL 108



 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 8/65 (12%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V+ L+ ++ +         +   F     + V  FQ ++GL   G+V   
Sbjct: 138 TLRFGSTHALVKVLQSKVGVE--------VDGIFGRATRAGVVSFQAQNGLYADGIVGKL 189

Query: 161 TLEAM 165
           T   +
Sbjct: 190 TWSKL 194


>gi|255525876|ref|ZP_05392804.1| SpoIID/LytB domain protein [Clostridium carboxidivorans P7]
 gi|296185117|ref|ZP_06853527.1| SpoIID/LytB domain protein [Clostridium carboxidivorans P7]
 gi|255510440|gb|EET86752.1| SpoIID/LytB domain protein [Clostridium carboxidivorans P7]
 gi|296049951|gb|EFG89375.1| SpoIID/LytB domain protein [Clostridium carboxidivorans P7]
          Length = 858

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +   PL+LG +   V  L+  LI  G        +  F +  +SAV  FQ   G+  +G 
Sbjct: 777 IAALPLNLGMTGSDVISLQNALIKLGY--NISSATGYFGSQTKSAVIAFQTSAGIPATGT 834

Query: 157 VDSSTLEAMN 166
           V + T  ++N
Sbjct: 835 VGTWTYSSLN 844


>gi|117621302|ref|YP_858233.1| general secretion pathway protein A [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562709|gb|ABK39657.1| general secretion pathway protein A [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 525

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 4/126 (3%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSS--VSVQRLRE 116
           V++G D    +I  ++     + ++ Y        W         +GN++    VQ L  
Sbjct: 378 VNLGPDKANLLIGNQSWQVDRQWLSDYWGGSYTLLWRMPKGGVTLIGNNAGPSQVQWLDN 437

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
            L  +  L         FDA +++ ++ FQ   GL+P G+  S+TL  +NV     + +L
Sbjct: 438 ALSRA--LQQPDRKVRRFDAELKTKLQQFQRAQGLNPDGIAGSNTLLRLNVMAGEPMPKL 495

Query: 177 QVNLMR 182
           +    R
Sbjct: 496 EDPAQR 501


>gi|300780168|ref|ZP_07090024.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium genitalium ATCC
           33030]
 gi|300534278|gb|EFK55337.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium genitalium ATCC
           33030]
          Length = 386

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 18/130 (13%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LG- 105
           F+  +   +    S   ++  + +AQT KA    + IL  G   E+ +R L      LG 
Sbjct: 24  FEGDVGEWNRRSFSQAEMLFDDELAQTLKAFQQSRGILPSGDIDEITLRELRHASYTLGA 83

Query: 106 ----------NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                          V +L+++L   G       +   F     +A++ +Q+ +G+   G
Sbjct: 84  RVLSYQPSQIMVGDDVGQLQKQLQELGFYSG--RVDGHFGPDTHAALQDYQINYGIQDDG 141

Query: 156 MVDSSTLEAM 165
           +    T+ A+
Sbjct: 142 ICGPETMHAL 151



 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 12/73 (16%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQMRHGLD 152
           G+SS  V  +R  L   G L   +G              + FD  +   +K FQ   G+ 
Sbjct: 2   GDSSARVAEVRSTLARLGLLPGFEGDVGEWNRRSFSQAEMLFDDELAQTLKAFQQSRGIL 61

Query: 153 PSGMVDSSTLEAM 165
           PSG +D  TL  +
Sbjct: 62  PSGDIDEITLREL 74


>gi|302553257|ref|ZP_07305599.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302470875|gb|EFL33968.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 259

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 92  GGWPELPIRPLHL----GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W     R L      GN+   V    + L+    L P   +   F  + E AV+  Q 
Sbjct: 182 GRWYAGNSRTLKAVLATGNAGPEVAE-AQCLLREAGLSPGA-VDGIFGPHTEQAVRELQK 239

Query: 148 RHGLDPSGMVDSSTLEAM 165
           R GL   G++   T +A+
Sbjct: 240 RSGLVVDGIIGPHTWKAL 257


>gi|209516749|ref|ZP_03265601.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. H160]
 gi|209502866|gb|EEA02870.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. H160]
          Length = 272

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V+  ++ L  +G       +   +     +AV  +Q   GL P G+    T
Sbjct: 6   LQQGDTGDDVKTWQQCLARNGFNPGE--IDGVYGQATVAAVIAYQKSEGLLPDGVAGPRT 63

Query: 162 LEAM 165
           L A+
Sbjct: 64  LLAL 67


>gi|295314766|gb|ADF97533.1| PlyM8 [uncultured phage]
          Length = 357

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L L ++  +V+ L+  L  +G L     +   F    E+AVK FQ  +GL   G+  + +
Sbjct: 218 LLLDDTGAAVKTLQSELKQAGFL---LSVGGIFGKGTETAVKAFQRANGLAVDGVFGTGS 274

Query: 162 LEAMN 166
              +N
Sbjct: 275 QAKLN 279


>gi|242373732|ref|ZP_04819306.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348552|gb|EES40154.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           M23864:W1]
          Length = 526

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   LG+ + +V+ ++  L   G        S  FD+ +ESA+K FQ  + LD +G  D 
Sbjct: 440 KTYQLGDDNKNVKTMKIGLTALGY--KVDNESNKFDSDLESAIKSFQRDNHLDVTGQFDK 497

Query: 160 ST 161
            T
Sbjct: 498 KT 499


>gi|302558839|ref|ZP_07311181.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
 gi|302476457|gb|EFL39550.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
          Length = 278

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 25/144 (17%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P R L   G+S   ++ L+ RL     +   +G +  +D     AV+ FQ + GL  +G+
Sbjct: 68  PARVLWSPGDSGRDIRELQARLRQVAWI--FQGPTGTYDEPTAEAVRGFQGKRGLPRTGV 125

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLM--RIKKLL----EQKMGL------RYVLVNIPAAS 204
            DS T            R L +     R +  L                R + ++  + +
Sbjct: 126 TDSVTWR----------RLLDMTHEPGRWELYLMGGQPADAPDPRCGTGRVLCISKSSRT 175

Query: 205 LEAVENGKVGLRSTVIVGRVDRQT 228
           L  + +G+      V  G     T
Sbjct: 176 LRWMIDGRTVSTMAVRFGSEYTPT 199


>gi|227834354|ref|YP_002836061.1| putative hydrolase [Corynebacterium aurimucosum ATCC 700975]
 gi|262183086|ref|ZP_06042507.1| putative hydrolase [Corynebacterium aurimucosum ATCC 700975]
 gi|227455370|gb|ACP34123.1| putative hydrolase [Corynebacterium aurimucosum ATCC 700975]
          Length = 394

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 12/78 (15%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQM 147
           R L +G+ SV V   R  L   G +   +G                FD+ +   +K FQ 
Sbjct: 3   RVLRVGDQSVRVAEARATLARLGLMTDYQGTLSDWKKQKYSEADKHFDSELAEVLKAFQQ 62

Query: 148 RHGLDPSGMVDSSTLEAM 165
             G+ PSG +D  TL  +
Sbjct: 63  SRGIVPSGDIDELTLREL 80



 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL---MRIKKLLEQK 190
           F A   +A+  +Q+  GL   G+    T+ A+N+           N+    R++    Q 
Sbjct: 126 FGARTYAALAEYQLNSGLRSDGICGPETINALNLLGRRITGGSAHNIQERERVRNAGPQL 185

Query: 191 MGLRYVLVNIPAASLEAVENGKVG 214
            G R V+      SL     G+  
Sbjct: 186 AGKRVVI----DPSLGGFNKGRTV 205


>gi|22218341|ref|NP_671724.1| matrix metalloproteinase-21 preproprotein [Homo sapiens]
 gi|317373390|sp|Q8N119|MMP21_HUMAN RecName: Full=Matrix metalloproteinase-21; Short=MMP-21; Flags:
           Precursor
 gi|22134532|gb|AAM92903.1|AF331526_1 putative matrix metalloproteinase [Homo sapiens]
 gi|55661689|emb|CAH73211.1| matrix metallopeptidase 21 [Homo sapiens]
 gi|55959618|emb|CAI12086.1| matrix metallopeptidase 21 [Homo sapiens]
 gi|162318546|gb|AAI56369.1| Matrix metallopeptidase 21 [synthetic construct]
 gi|225000648|gb|AAI72493.1| Matrix metallopeptidase 21 [synthetic construct]
          Length = 569

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 41/126 (32%), Gaps = 25/126 (19%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              +    + ++     D       P+   + IA    A    Q  LSR GW  +     
Sbjct: 15  WLAAPWPTQPESLFHSRDRSDLEPSPLRQAKPIADLHAA----QRFLSRYGWSGVWA--- 67

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                              G        +    A +  AV+ FQ  + L  SG +D++TL
Sbjct: 68  -----------------AWGPSPEGPPETPK-GAALAEAVRRFQRANALPASGELDAATL 109

Query: 163 EAMNVP 168
            AMN P
Sbjct: 110 AAMNRP 115


>gi|21693575|gb|AAM75352.1|AF520613_1 matrix metalloproteinase-21 [Homo sapiens]
 gi|21928002|gb|AAM78033.1| MMP21 protein [Homo sapiens]
 gi|58003496|gb|AAW62254.1| matrix metalloproteinase 21 [Homo sapiens]
          Length = 569

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 41/126 (32%), Gaps = 25/126 (19%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              +    + ++     D       P+   + IA    A    Q  LSR GW  +     
Sbjct: 15  WLAAPWPTQPESLFHSRDRSDLEPSPLRQAKPIADLHAA----QRFLSRYGWSGVWA--- 67

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                              G        +    A +  AV+ FQ  + L  SG +D++TL
Sbjct: 68  -----------------AWGPSPEGPPETPK-GAALAEAVRRFQRANALPASGELDAATL 109

Query: 163 EAMNVP 168
            AMN P
Sbjct: 110 AAMNRP 115


>gi|182435141|ref|YP_001822860.1| putative amidase [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178463657|dbj|BAG18177.1| putative amidase [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 519

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+ ++  L   G    +   S  F    + AV+ FQ    L+  G V   T  A
Sbjct: 387 GSTGPQVKAVQTLLNAQGYQAGAADGS--FGPTTKGAVQAFQRARALEADGTVGPKTWTA 444

Query: 165 M 165
           +
Sbjct: 445 L 445



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 11/95 (11%)

Query: 80  KAIAFYQDILSRGG-----WPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           +A    + + + G      W  L        L  G S  +V+RL+  L  +  L  + G 
Sbjct: 423 QAFQRARALEADGTVGPKTWTALLSAGTTPALAKGASGDAVKRLQRALTAA--LGTTVGA 480

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +F    E+AV+ +Q    L   G V  +T  A+
Sbjct: 481 DGSFGPATETAVRTYQTGRKLSVDGKVGPATWGAL 515


>gi|326775778|ref|ZP_08235043.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces cf. griseus XylebKG-1]
 gi|326656111|gb|EGE40957.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces cf. griseus XylebKG-1]
          Length = 519

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+ ++  L   G    +   S  F    + AV+ FQ    L+  G V   T  A
Sbjct: 387 GSTGPQVKAVQTLLNAQGYQAGAADGS--FGPTTKGAVQAFQRARALEADGTVGPKTWTA 444

Query: 165 M 165
           +
Sbjct: 445 L 445



 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 11/95 (11%)

Query: 80  KAIAFYQDILSRGG-----WPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           +A    + + + G      W  L        L  G S  +V+RL+  L  +  L  + G 
Sbjct: 423 QAFQRARALEADGTVGPKTWTALLSAGTTPALAKGASGDAVKRLQRALTAA--LGTTVGA 480

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +F    E+AV+ +Q    L   G V  +T   +
Sbjct: 481 DGSFGPATETAVRTYQTGRKLSVDGKVGPATWGGL 515


>gi|169335886|ref|ZP_02863079.1| hypothetical protein ANASTE_02319 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258624|gb|EDS72590.1| hypothetical protein ANASTE_02319 [Anaerofustis stercorihominis DSM
           17244]
          Length = 214

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           +Y+ + + GG P      +  G+    V++ + RLI  G    + G    F +  E+AVK
Sbjct: 135 YYRSVRTFGGSPA-YYPIIAKGSRGAYVKKAQNRLIKKGYKISADG---IFGSSTENAVK 190

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            FQ +  +   G+V  +T + +
Sbjct: 191 RFQKKSEITVDGIVGKNTWKLL 212


>gi|227497955|ref|ZP_03928135.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
 gi|226832613|gb|EEH64996.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
          Length = 621

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 8/83 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           GW       L  G + V V+ +++RL IS     +       +   ++AV+ FQ R GL 
Sbjct: 395 GW---ATNELTPGMNGVKVRIVQQRLGIS-----NGSALATANGTFQNAVRNFQRRAGLP 446

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQ 175
            +G+VD  T  AM       + Q
Sbjct: 447 QTGVVDQQTWNAMGTGFSWWVDQ 469


>gi|154705804|ref|YP_001423831.1| hypothetical protein CBUD_0411 [Coxiella burnetii Dugway 5J108-111]
 gi|154355090|gb|ABS76552.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111]
          Length = 314

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 44/177 (24%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGL-RSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +    +++N+ A  L     GK       V +GR +  TP+    I + + NP WV+P
Sbjct: 89  PPVPKEGIVINLAAMRLYYFPKGKNYFYTYPVGIGRFNWSTPLGKLHIIQKIKNPVWVVP 148

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            S+++                       E G  V                     G  N 
Sbjct: 149 DSVLRY--------------------RQENGDPVPKMM---------------PSGPENP 173

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           +    +       TY +H T +P    +V R  ++GC+ +   +I  L   +  DTP
Sbjct: 174 LGYYALRLSQP--TYLIHGTNDPS---SVGRRSSAGCIHLYPEDIKALFGMVSVDTP 225


>gi|329121069|ref|ZP_08249700.1| cell wall hydrolase [Dialister micraerophilus DSM 19965]
 gi|327471231|gb|EGF16685.1| cell wall hydrolase [Dialister micraerophilus DSM 19965]
          Length = 248

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             +GNS   V+ ++ +L+  G       +   +    E+AV++FQ R  L   G++   T
Sbjct: 26  YKIGNSGEIVKLIQRKLVKQG---IKIEIDGKYGKDTENAVRIFQKRKKLKVDGIIGEET 82

Query: 162 LEAM 165
             A+
Sbjct: 83  YFAL 86


>gi|313891875|ref|ZP_07825480.1| NlpC/P60 family protein [Dialister microaerophilus UPII 345-E]
 gi|313119869|gb|EFR43056.1| NlpC/P60 family protein [Dialister microaerophilus UPII 345-E]
          Length = 251

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             +GNS   V+ ++ +L+  G       +   +    E+AV++FQ R  L   G++   T
Sbjct: 26  YKIGNSGEIVKLIQRKLVKQG---IKIEIDGKYGKDTENAVRIFQKRKKLKVDGIIGEET 82

Query: 162 LEAM 165
             A+
Sbjct: 83  YFAL 86


>gi|220934928|ref|YP_002513827.1| hypothetical protein Tgr7_1758 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996238|gb|ACL72840.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 424

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 42/165 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++ +  +     +++N+P   L     G+   +   + +GR+D  TP+   R+ +    P
Sbjct: 92  RRHILPRQHRSGIVINLPEMRLYDYTAGQDHIMTYAISIGRMDWSTPLGTLRVIQKTEQP 151

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI Q            Y                             +      P
Sbjct: 152 TWTPPASIRQ-----------AYAAR------------------------GESLPAVVPP 176

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
           G  N +    +   + +  Y +H T  P      +R  T GC+R+
Sbjct: 177 GPDNPLGEFAMRLSNPS--YLIHGTNWPE--GIGMRA-THGCIRL 216


>gi|296333268|ref|ZP_06875721.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675228|ref|YP_003866900.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149466|gb|EFG90362.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413472|gb|ADM38591.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 250

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 96  ELPIRPLHLGN---SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMR 148
            LP   + L +      +V +L++ L            + G+   +     +AVK FQ+ 
Sbjct: 169 PLPSGVIKLTSPYRKGTNVLQLQKALAALHFYPDKGAKNNGIDGVYGPKTANAVKRFQLL 228

Query: 149 HGLDPSGMVDSSTLEAM 165
           +GL   G+    T   +
Sbjct: 229 NGLAADGIYGPKTKAKL 245


>gi|261404509|ref|YP_003240750.1| spore cortex-lytic enzyme [Paenibacillus sp. Y412MC10]
 gi|261280972|gb|ACX62943.1| spore cortex-lytic enzyme [Paenibacillus sp. Y412MC10]
          Length = 219

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+ +  V  L+ RL        ++ L   + A  ++AV  FQ  +G+   G+  + T
Sbjct: 36  LKPGSENGDVWDLQYRLKTLDFY--TQPLDGKYGANTKAAVSRFQKEYGVPADGITGAQT 93

Query: 162 LEAM 165
              +
Sbjct: 94  WRQL 97


>gi|297158109|gb|ADI07821.1| hypothetical protein SBI_04701 [Streptomyces bingchenggensis BCW-1]
          Length = 207

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 47/134 (35%), Gaps = 20/134 (14%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G SS  V+ L+ RL   G     +  +  +     S+V  +Q  HGL  +G VD  T  +
Sbjct: 5   GTSSERVRELQARLRALGLF--GRNPTGYYGTVTRSSVLAYQRGHGLSATGSVDRRTWNS 62

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGL----------RYVLVNIPAASLEAVENGKVG 214
           +      R         R +        L          R + ++  + +L  + NGKV 
Sbjct: 63  L-RTATKRPT-------RDELYPPTTNPLAKPDPRCMTGRALCISKTSRTLAWMVNGKVV 114

Query: 215 LRSTVIVGRVDRQT 228
               V  G     T
Sbjct: 115 SAMDVRFGSQYTPT 128


>gi|270261600|ref|ZP_06189873.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia odorifera 4Rx13]
 gi|270045084|gb|EFA18175.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia odorifera 4Rx13]
          Length = 337

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 47/198 (23%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+    L     G+   +   + +G+    TP+  + +++ + NP W    +I ++ 
Sbjct: 100 IVVNLAELRLYYYPKGENKVIVYPIGIGQTGMHTPLQVTSVSQKIPNPTWTPTANIRKR- 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                +          G  N M    + 
Sbjct: 159 ----------------------------------YQAKGVTLPAVIPAGPENPMGLFAMR 184

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH-----I 368
               +  Y +H T     F   +R  +SGC+R+    D+   L    P  +R       +
Sbjct: 185 LAMGHGEYLIHGTNAN--FGIGMR-VSSGCIRL-RPKDI-EALFNMVPRGTRVQVINDPV 239

Query: 369 EEVVKTRKTTPVKLATEV 386
           +  V+      V++   +
Sbjct: 240 KISVEPDGKRYVEVHQPL 257


>gi|312200483|ref|YP_004020544.1| peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
 gi|311231819|gb|ADP84674.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
          Length = 226

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 32/174 (18%)

Query: 3   GYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIV----NDRFDNFLAR 58
           G  +IN   +  +V        +L +   +A    ++   S         N  +  +L+R
Sbjct: 72  GLWQINMWAHSSWVGSR-----NLYDPATNAWAATQVCKGSGPGAWSTYSNGAYRAYLSR 126

Query: 59  -------VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSV 111
                  V  G  S  P+   +       A A+Y    +               +   +V
Sbjct: 127 GYAAANAVSSGTVSAAPVSLAKAAPAVP-ANAWYLSQAANHS------------SYLDAV 173

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++L+ +L   G    +  +   F    +  V+ +Q  HGL   G+V   T +A+
Sbjct: 174 RQLQTKLSGLGY---TIAVDGYFGPQTDGVVRAYQGSHGLPADGVVGPQTHQAL 224


>gi|332971678|gb|EGK10626.1| carboxy-terminal processing protease [Desmospora sp. 8437]
          Length = 482

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G  P  P + L    +S  V+ L+  L   G           +    E+AVK FQ    L
Sbjct: 382 GATPPQPDKTLKRDMTSQQVKNLQLILEGLGY--RPDRTDGYYSEQTETAVKAFQRTQKL 439

Query: 152 DPSGMVDSST 161
             +G+VDS T
Sbjct: 440 SVTGVVDSKT 449


>gi|311032644|ref|ZP_07710734.1| putative cell wall endopeptidase [Bacillus sp. m3-13]
          Length = 215

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           EL  + L  G     V+ L++ L   G    S+  +   +     AVK FQ  +G+  +G
Sbjct: 24  ELGDQTLKPGMYHEDVKELQKVLDDKGYFGYSETTTYYGEYT-TDAVKKFQADNGITVNG 82

Query: 156 MVDSSTLEAMNV 167
           +    T EA+ +
Sbjct: 83  IAGEETFEALGI 94


>gi|329930802|ref|ZP_08284207.1| spore cortex-lytic enzyme [Paenibacillus sp. HGF5]
 gi|328934661|gb|EGG31164.1| spore cortex-lytic enzyme [Paenibacillus sp. HGF5]
          Length = 219

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+ +  V  L+ RL        ++ L   + A  ++AV  FQ  +G+   G+  + T
Sbjct: 36  LKPGSENGDVWDLQYRLKTLDFY--TQPLDGKYGANTKAAVSRFQKEYGVPADGITGAQT 93

Query: 162 LEAM 165
              +
Sbjct: 94  WRQL 97


>gi|218708445|ref|YP_002416066.1| putative general secretion pathway protein A [Vibrio splendidus
           LGP32]
 gi|218321464|emb|CAV17416.1| putative general secretion pathway protein A [Vibrio splendidus
           LGP32]
          Length = 556

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 14/119 (11%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
            V++ ++  + ++ K+++ Q  +    Y  I     W +     L  G    +V  L   
Sbjct: 439 SVELLVNEKLLVMPKQSLEQIWQG--DYVAI-----WKQPLRETLKEGYQGEAVALLDL- 490

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
            ++S  L      S  FD  ++  ++ FQ   G+   G+    TL  +      R+ QL
Sbjct: 491 -LLSEVLGEVVSGSDVFDYELKMKIEAFQTWQGMSVDGIAGKLTLARL-----QRLAQL 543


>gi|163839614|ref|YP_001624019.1| cell wall hydrolase [Renibacterium salmoninarum ATCC 33209]
 gi|162953090|gb|ABY22605.1| cell wall hydrolase [Renibacterium salmoninarum ATCC 33209]
          Length = 196

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G +S  V RL++ L  +G     + +   F     +AVK +Q  HGL   G+V  +T
Sbjct: 85  IEKGQNSGCVTRLQQLLNNNG---AKRTVDGGFGDGTFTAVKSYQSAHGLSADGIVGPNT 141

Query: 162 LEAMNVPVD 170
             A+     
Sbjct: 142 KGALEGGPA 150


>gi|311696715|gb|ADP99588.1| ErfK/YbiS/YcfS/YnhG family protein [marine bacterium HP15]
          Length = 348

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 51/197 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           ++ +        +++N+    L    +  V +   V VG  +  +P+  + +   + +P 
Sbjct: 104 RQYVLPDARREGIVINLAEYRLYYFTDEGVQV-YPVGVGTAENPSPLTDAEVTMPLESPA 162

Query: 244 WVIPRSI-----IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
           W  P SI        D +  +                                       
Sbjct: 163 WYPPASIRAEYEASGDYLPRMI-------------------------------------- 184

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
              PG  N + +  +   S     +H T +   F   +   + GC R+ N  D+  ++ +
Sbjct: 185 --PPGPGNPLGTHALLL-SEKGYLIHGTNKK--FGVGM-PVSHGCFRMYN-EDISRFVYQ 237

Query: 359 DTPTWSRYHIEEVVKTR 375
                    + + VK  
Sbjct: 238 VEKGTPVQVVHDAVKIG 254


>gi|297545556|ref|YP_003677858.1| carboxyl-terminal protease [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843331|gb|ADH61847.1| carboxyl-terminal protease [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 456

 Score = 52.1 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 35/180 (19%)

Query: 3   GYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG 62
            YL   K      +         ++   I  + +  ++ E                    
Sbjct: 272 SYLNNPKYRLAVLINGNTASAAEILAGAIQDTKVGILVGEKSFG-------------KGT 318

Query: 63  IDSDIPIISKETIAQTEKAIAFY-----QDILSRGGWPELPI------------RPLHLG 105
           + S +P+        T   IA Y     + I  +G  P++ +              L +G
Sbjct: 319 VQSVVPLPDGSGFKLT---IARYKLPSGRYIDKQGLKPDIYVASTQYTPSIKFNGTLKVG 375

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +    V+ +++ L I      +      F     +AVK  Q + GL P+G+ D +T +AM
Sbjct: 376 SKGNDVKIIQKHLNILKF--NAGPEDGIFGPKTANAVKKLQKKAGLTPTGVFDKNTYDAM 433


>gi|157693492|ref|YP_001487954.1| M15C subfamily peptidase [Bacillus pumilus SAFR-032]
 gi|157682250|gb|ABV63394.1| M15C subfamily peptidase [Bacillus pumilus SAFR-032]
          Length = 274

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDP-SKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            +PL  G+   +VQ+    L    D    + G+   +     +AVK FQ+ +GL   G+ 
Sbjct: 201 TKPLTKGSQVTAVQKALSSLYFYPDKGAKNNGIDGYYGPKTANAVKRFQLMNGLAADGIY 260

Query: 158 DSSTLEAM 165
              T   M
Sbjct: 261 GPKTRNKM 268


>gi|27364080|ref|NP_759608.1| general secretion pathway protein A [Vibrio vulnificus CMCP6]
 gi|27360198|gb|AAO09135.1| General secretion pathway protein A [Vibrio vulnificus CMCP6]
          Length = 718

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP      L LG    +++ L + L  +  L+    ++  F+A +   V+ FQ    +  
Sbjct: 456 WPMPLRETLRLGMHGEAIEVLDQLLAKA--LNDEPLMTTQFNAELMQRVEWFQRWQAMTE 513

Query: 154 SGMVDSSTLEAM 165
            G+    TL  +
Sbjct: 514 DGIAGQRTLARL 525


>gi|168052912|ref|XP_001778883.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669752|gb|EDQ56333.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 648

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 29/60 (48%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +S   V  L+  L   G L     L+  F    + A++ FQ+ HG+  +G   SS+ +A+
Sbjct: 206 DSGPQVLDLQRTLYWFGYLPNRTALTAYFGPETKKALQQFQIAHGVPATGAWGSSSRQAL 265


>gi|296102710|ref|YP_003612856.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057169|gb|ADF61907.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 337

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L      G +     + +G++  +TP+  +R+++ + NP W
Sbjct: 89  MLLPDTPREGIVVNLAELRLYYYPPGGNIVQVFPLGIGQLGLETPVTTTRVSQKIPNPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I  + +            +  I +                             G 
Sbjct: 149 TPTPGIRARSL------------EQGIKL-----------------------PPVVPAGP 173

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 174 NNPLGRFALRLGVGNGEYLIHGTSAP---DSVGLRVSSGCMRMNAPDIKALF 222


>gi|238063101|ref|ZP_04607810.1| Muramoyl-pentapeptide carboxypeptidase [Micromonospora sp. ATCC
           39149]
 gi|237884912|gb|EEP73740.1| Muramoyl-pentapeptide carboxypeptidase [Micromonospora sp. ATCC
           39149]
          Length = 242

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L+ G S   V++L+ R+               +     +AV+ FQ  +GL   G+  
Sbjct: 19  TRDLYEGRSGEDVRQLQIRVAGWAGRRDIVETDGNYGPKTAAAVRRFQSAYGLPADGIAG 78

Query: 159 SSTLEAM 165
             T   +
Sbjct: 79  PQTYTKL 85


>gi|84394160|ref|ZP_00992892.1| putative general secretion pathway protein A [Vibrio splendidus
           12B01]
 gi|84375219|gb|EAP92134.1| putative general secretion pathway protein A [Vibrio splendidus
           12B01]
          Length = 556

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W +     L  G    ++  L    ++S  L      S  FD  ++  ++ FQM  G+  
Sbjct: 468 WKQPLRDTLKEGYQGEAIALLDL--LLSEVLGEDVSGSDVFDYELKMKIEAFQMWQGMSV 525

Query: 154 SGMVDSSTLEAMNVPVDLRIRQL 176
            G+    TL  +      R+ QL
Sbjct: 526 DGIAGKRTLARL-----QRLAQL 543


>gi|239929324|ref|ZP_04686277.1| lipoprotein [Streptomyces ghanaensis ATCC 14672]
          Length = 262

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 24/137 (17%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G+S   V+ L+ RL  +  L    G +  +D   E AVK FQ + GL  +G  D+ T +
Sbjct: 59  PGDSGRDVRELQARLRQAAWL--FHGPTGTYDGPTEEAVKGFQGKRGLPRTGRTDTVTWQ 116

Query: 164 AMNVPVDLRIRQLQVNLM--RIKKLL----EQKMGL------RYVLVNIPAASLEAVENG 211
                     R L +     R +  L                R + ++  + +L  + +G
Sbjct: 117 ----------RLLGMTREPGRWELYLMGGQPADAPDARCRTGRVLCISKSSRTLRWMVDG 166

Query: 212 KVGLRSTVIVGRVDRQT 228
           +      V  G     T
Sbjct: 167 RTVSTMPVRFGSEYTPT 183


>gi|198282692|ref|YP_002219013.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665455|ref|YP_002424884.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|198247213|gb|ACH82806.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218517668|gb|ACK78254.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 347

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 49/152 (32%), Gaps = 40/152 (26%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+P   L     G+ V     V + R     P+  +RI   + NP W +P++I ++ 
Sbjct: 98  IIINVPERRLFYFPPGQNVVYTYPVGIFRPKWPNPLGSTRIIAKVKNPTWTVPKNIQEE- 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++            G  N M    +E
Sbjct: 157 ----------------------------------HAKVGEPIPAFFPAGPDNPMGELALE 182

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
               +  ++H T +P      +R  + GC  V
Sbjct: 183 -TGWSQIFIHGTNKPW--GVGMR-VSHGCFHV 210


>gi|52841825|ref|YP_095624.1| hypothetical protein lpg1595 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628936|gb|AAU27677.1| hypothetical protein lpg1595 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 244

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L   +  + V++N+    L     +  V +   V +G+   +TP+  SRI     NP
Sbjct: 88  RFILP-NVPRKGVVINLAEYRLYYFPPDDNVVMTYPVGIGKKGWETPLGLSRIISKEINP 146

Query: 243 YWV 245
            W 
Sbjct: 147 TWR 149


>gi|80159841|ref|YP_398585.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium phage
           c-st]
 gi|78675431|dbj|BAE47853.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium phage
           c-st]
          Length = 309

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 14/98 (14%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V++L+  L   G    +      F    ++AV  FQ  +GL   G+V
Sbjct: 173 SSGLLKVGSREDKVKQLQANLNKLGYTCGNADG--IFGQGTKNAVISFQRNNGLSADGVV 230

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             ST             ++  NL  +++     + + Y
Sbjct: 231 GESTWN-----------KILSNLE-VRRFKPLPLKMIY 256


>gi|297160931|gb|ADI10643.1| hypothetical protein SBI_07523 [Streptomyces bingchenggensis BCW-1]
          Length = 433

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 6/67 (8%)

Query: 102 LHLGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVD 158
           L  G+S   V  L++RL  +   L  S G    +D  V +AV  FQ  +G++    G+  
Sbjct: 363 LQEGDSGSEVVELQKRLGQLLLYLGSSDGE---YDDGVRNAVTSFQNTYGVEGDPKGVYG 419

Query: 159 SSTLEAM 165
            +T  A+
Sbjct: 420 PNTRRAL 426


>gi|153843209|ref|ZP_01993550.1| LysM domain protein [Vibrio parahaemolyticus AQ3810]
 gi|149745333|gb|EDM56584.1| LysM domain protein [Vibrio parahaemolyticus AQ3810]
          Length = 158

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            ++  + +++N+    L     G+ V     V +GR+ R TP++ + I++   NP W  P
Sbjct: 97  PEVPHQGIVINLAELRLYYFPEGEDVVHVFPVGIGRIGRDTPVMTTSISQKRPNPTWTPP 156

Query: 248 RS 249
            S
Sbjct: 157 AS 158


>gi|300856423|ref|YP_003781407.1| N-acetylmuramoyl-L-alanine amidase [Clostridium ljungdahlii DSM
           13528]
 gi|300436538|gb|ADK16305.1| N-acetylmuramoyl-L-alanine amidase [Clostridium ljungdahlii DSM
           13528]
          Length = 226

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 98  PIRPLH--LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P  P+    G    +V+ ++E+L+  G      G    F      AVK FQ  +GL   G
Sbjct: 155 PGYPIRMNPGLEDSNVKAVQEKLMSRGYSVGRCGADGFFGWGTLEAVKSFQRDNGLAVDG 214

Query: 156 MVDSSTLEAM 165
           +V  +T   +
Sbjct: 215 IVGVNTWNKL 224


>gi|298493144|ref|YP_003723321.1| peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
 gi|298235062|gb|ADI66198.1| Peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
          Length = 200

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 8/67 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V+ ++  L I         +   +       V+ FQ R+GL   G+V  ST
Sbjct: 142 LRQGARGERVRVVQRALGI--------RVDGVYGPNTAYHVRNFQRRNGLLVDGIVGPST 193

Query: 162 LEAMNVP 168
             A+ + 
Sbjct: 194 RRALGIS 200


>gi|162456928|ref|YP_001619295.1| hypothetical protein sce8645 [Sorangium cellulosum 'So ce 56']
 gi|161167510|emb|CAN98815.1| hypothetical protein sce8645 [Sorangium cellulosum 'So ce 56']
          Length = 483

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+E L   GD   + G   +F     +A+   Q   GL  +G+VD++T+ A
Sbjct: 33  GAHGDGVRALQEALGTLGDAMKADG---SFGPKTHAAIVALQGAEGLPQTGIVDAATIAA 89

Query: 165 MNVPVDLRIRQ-LQVNLMRIKKLLEQK 190
           ++  +  R RQ L+  + R   L  ++
Sbjct: 90  LDRRLGARRRQPLEEAMARAAGLSPEE 116


>gi|229587283|ref|YP_002860321.1| LycA [Clostridium botulinum Ba4 str. 657]
 gi|229260176|gb|ACQ51213.1| LycA [Clostridium botulinum Ba4 str. 657]
          Length = 318

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T 
Sbjct: 251 KQGARGGITKVIQQMLINIGYPVGSYGADGVFGDGTVTAIKAFQRDCHLVADGIVGKETW 310

Query: 163 EAM 165
           +A+
Sbjct: 311 KAL 313


>gi|307610295|emb|CBW99859.1| hypothetical protein LPW_16201 [Legionella pneumophila 130b]
          Length = 241

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L   +  + V++N+    L     +  V +   V +G+   +TP+  SRI     NP
Sbjct: 88  RFILP-NVPRKGVVINLAEYRLYYFPPDDNVVMTYPVGIGKKGWETPLGLSRIISKEINP 146

Query: 243 YWV 245
            W 
Sbjct: 147 TWR 149


>gi|308173925|ref|YP_003920630.1| carboxy-terminal processing protease [Bacillus amyloliquefaciens
           DSM 7]
 gi|307606789|emb|CBI43160.1| carboxy-terminal processing protease [Bacillus amyloliquefaciens
           DSM 7]
 gi|328553148|gb|AEB23640.1| carboxy-terminal processing protease [Bacillus amyloliquefaciens
           TA208]
 gi|328912078|gb|AEB63674.1| carboxy-terminal processing protease [Bacillus amyloliquefaciens
           LL3]
          Length = 468

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 9/104 (8%)

Query: 79  EKAIA-FYQ-DILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +K I   YQ  +      P L   +    G+S  +V   ++ L   G    S  ++  +D
Sbjct: 354 KKGIEPQYQVKLPDYANLPYLDAEKTYQYGDSGTTVTNAQKMLEALGY---SVNVNGTYD 410

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
              E AVK FQ +  L  +G++   T   +   +    +QL  N
Sbjct: 411 KAFEQAVKQFQAKEKLKETGILTGDTTAKLMTDLQ---KQLADN 451


>gi|226942145|ref|YP_002797219.1| ErfK/YbiS/YcfS/YnhG family protein [Laribacter hongkongensis HLHK9]
 gi|226717072|gb|ACO76210.1| ErfK/YbiS/YcfS/YnhG family protein [Laribacter hongkongensis HLHK9]
          Length = 365

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 62/176 (35%), Gaps = 51/176 (28%)

Query: 196 VLVNIPAASLEAV---ENGKV--GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           V+VN+    L        G+    +   V V +    TP+  +R+   + +P W +PRSI
Sbjct: 102 VVVNVAQRRLFYFPPAREGEPRKVITFPVGVAKEGWSTPLGSTRVTSKLRDPGWSVPRSI 161

Query: 251 -IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
             +K+             +N +                        F     PG  N M 
Sbjct: 162 KAEKE------------AENGL-----------------------PFPDYVPPGPDNPMG 186

Query: 310 STKI--EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
              I   F    + ++H T +P      +R  + GC+++   N   L   L K+TP
Sbjct: 187 MLAIGTGFP---SIFIHATNKPW--GVGMRQ-SHGCIQLYPENAKLLFDTLPKNTP 236


>gi|154499164|ref|ZP_02037542.1| hypothetical protein BACCAP_03159 [Bacteroides capillosus ATCC
           29799]
 gi|150272004|gb|EDM99230.1| hypothetical protein BACCAP_03159 [Bacteroides capillosus ATCC
           29799]
          Length = 367

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+   +  ++R  LI  G    S G    F+A +   VK FQ   GL   G V   TL  
Sbjct: 116 GDIGAAPTQIRGLLIKKGYNCASTGP---FNAELVGVVKKFQKDSGLTQDGSVGQVTLAV 172

Query: 165 MNVPVDL 171
           +   V  
Sbjct: 173 LENTVSD 179



 Score = 44.4 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 100 RPLHLGN--SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           + L   +   S  +++L+  + ++G           +  Y E AV+ FQ   GL  SG+V
Sbjct: 19  KKLQRDDVTKSEDIKQLQRAIYMAGFWSSPSEPDGVYGIYTECAVRGFQYEKGLQTSGVV 78

Query: 158 DSSTLEAM 165
           D +TL  +
Sbjct: 79  DKATLSKL 86


>gi|169831666|ref|YP_001717648.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638510|gb|ACA60016.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 307

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 17/126 (13%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST---LEA 164
              V+ ++E+L  +G       ++  +     +AV+  Q  +G++PSG+VD+ T   L  
Sbjct: 48  GNDVREVQEQLRAAGLF--QGPVNGVYGPITAAAVRSLQEANGIEPSGVVDAETWYLLAL 105

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           M+ PV               + L    G   +++++   +L  +ENG    +    VG+ 
Sbjct: 106 MSTPVKT------------SEPLPPPTGEVEIIIDVQKRTLTVMENGYPYKQFPCAVGKN 153

Query: 225 DRQTPI 230
           +  TP+
Sbjct: 154 ETPTPV 159


>gi|115375071|ref|ZP_01462340.1| negative regulator of beta-lactamase expression [Stigmatella
           aurantiaca DW4/3-1]
 gi|310825431|ref|YP_003957789.1| n-acetylmuramoyl-l-alanine amidase, family 2 [Stigmatella
           aurantiaca DW4/3-1]
 gi|115367909|gb|EAU66875.1| negative regulator of beta-lactamase expression [Stigmatella
           aurantiaca DW4/3-1]
 gi|309398503|gb|ADO75962.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Stigmatella
           aurantiaca DW4/3-1]
          Length = 280

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPSG 155
           P   L  G++  +V++L++ L+ +G +  ++  +    F    E+AVK FQ    L  +G
Sbjct: 29  PPAGLRRGDTGPNVKKLQDALVKTGYMTQAQVNTGYGTFGPKTEAAVKKFQADKKLPTTG 88

Query: 156 MVDSSTLEAM 165
                T  A+
Sbjct: 89  FYGDLTHAAL 98


>gi|307331938|ref|ZP_07611033.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces violaceusniger Tu
           4113]
 gi|306882412|gb|EFN13503.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces violaceusniger Tu
           4113]
          Length = 299

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 4/136 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    + +G S   V+ L+ RL   G  + +   +  +    +++V  +Q  HGL  +
Sbjct: 87  PRVAPPVIAVGTSGDRVRELQARLRALGLFNRNP--TGYYGTITQASVSAYQRGHGLSVT 144

Query: 155 GMVDSSTLEAM--NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           G V   T  ++        R +      + + K   + +  R + ++  + +L  + NG+
Sbjct: 145 GSVSRRTWTSLRSATKTPTRDQLHPPTTLPLAKPDPRCLTGRVLCISKTSRTLAWMVNGR 204

Query: 213 VGLRSTVIVGRVDRQT 228
           V     V  G     T
Sbjct: 205 VVSAMDVRFGSEYTPT 220


>gi|218689620|ref|YP_002397832.1| hypothetical protein ECED1_1877 [Escherichia coli ED1a]
 gi|306815069|ref|ZP_07449225.1| hypothetical protein ECNC101_23543 [Escherichia coli NC101]
 gi|331657653|ref|ZP_08358615.1| putative LysM domain protein [Escherichia coli TA206]
 gi|218427184|emb|CAR08070.2| conserved hypothetical protein [Escherichia coli ED1a]
 gi|305851717|gb|EFM52170.1| hypothetical protein ECNC101_23543 [Escherichia coli NC101]
 gi|315299726|gb|EFU58966.1| LysM domain protein [Escherichia coli MS 16-3]
 gi|324007052|gb|EGB76271.1| LysM domain protein [Escherichia coli MS 57-2]
 gi|331055901|gb|EGI27910.1| putative LysM domain protein [Escherichia coli TA206]
          Length = 334

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYNYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +            +  I +                             G 
Sbjct: 148 TPTAGIRQRSL------------ERGIKL-----------------------PPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 221


>gi|118442933|ref|YP_877698.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium novyi NT]
 gi|118133389|gb|ABK60433.1| ErfK/YbiS/YcfS/YnhG family [Clostridium novyi NT]
          Length = 305

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 50/146 (34%), Gaps = 19/146 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           I PL LG+    V+ L+  L   G    + G    F +  E A+  FQ ++ L+  G+  
Sbjct: 79  ITPLKLGSKGDDVKTLQNNLNKFGYKIKADG---VFGSSTEIAIYDFQKKNNLNRDGVAG 135

Query: 159 SSTLEAMNVPVDLRIR-----------QLQVNLMR-IKKLLEQKMGLRYVLV--NIP-AA 203
            STL+ + +    +                 N    I K         Y+ V  N P   
Sbjct: 136 ESTLKKLALEPTEKTMYNPKDDIFSPVISSNNFENFINKRNANSQTDYYIWVNTNTPKTY 195

Query: 204 SLEAVENG-KVGLRSTVIVGRVDRQT 228
             +   +  K+       VGR    T
Sbjct: 196 IFKGYNHHWKLIKSMPCTVGRSSSPT 221


>gi|54294361|ref|YP_126776.1| hypothetical protein lpl1430 [Legionella pneumophila str. Lens]
 gi|53754193|emb|CAH15670.1| hypothetical protein lpl1430 [Legionella pneumophila str. Lens]
          Length = 244

 Score = 52.1 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L   +  + V++N+    L     +  V +   V +G+   +TP+  SRI     NP
Sbjct: 88  RFILP-NVPRKGVVINLAEYRLYYFPPDDNVVMTYPVGIGKKGWETPLGLSRIISKEINP 146

Query: 243 YWV 245
            W 
Sbjct: 147 TWR 149


>gi|167041966|gb|ABZ06703.1| putative ErfK/YbiS/YcfS/YnhG [uncultured marine microorganism
           HF4000_141E02]
          Length = 313

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 39/151 (25%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + +N+         N +  +   V +GR+D  TP+  S+++  + NP W  P S ++++ 
Sbjct: 104 MTINLAEYR-GFFANDEELITFPVGIGRMDWTTPLGISKVDLKLENPAWYPPLS-VRQEY 161

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
               +++  YL              V                     G  N +    +  
Sbjct: 162 ----QEEGIYLA------------PVIP------------------AGPDNPLGKLAMRL 187

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                 ++H T +P      V   + GC+R+
Sbjct: 188 DIPGGYFIHGTNKPDGVGMQV---SHGCIRL 215


>gi|302532772|ref|ZP_07285114.1| predicted protein [Streptomyces sp. C]
 gi|302441667|gb|EFL13483.1| predicted protein [Streptomyces sp. C]
          Length = 137

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            G+S   V  L+  L I   LD   G+   +    E+AVK  Q R  L   G+    T
Sbjct: 60  PGSSGPQVAELQRALTICQGLDTG-GVDGVYGRKTEAAVKTVQARRSLKVDGIYGPDT 116


>gi|304404662|ref|ZP_07386323.1| Peptidoglycan-binding domain 1 protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304346469|gb|EFM12302.1| Peptidoglycan-binding domain 1 protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 389

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 96  ELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +  RP+   G+    V R++  L  +G   P   +   F +  E AV+ FQ  + L+  
Sbjct: 4   AVATRPIIKRGSKGEEVTRIQTLLNKAGF--PPGTVDSDFGSNTEEAVRNFQKANHLEVD 61

Query: 155 GMVDSSTLEAM 165
           G+V   T   +
Sbjct: 62  GVVGKDTWALL 72


>gi|330839278|ref|YP_004413858.1| 3D domain-containing protein [Selenomonas sputigena ATCC 35185]
 gi|329747042|gb|AEC00399.1| 3D domain-containing protein [Selenomonas sputigena ATCC 35185]
          Length = 200

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    SV+ +++ LI  G L   +   V       +A+  FQ  +GL+  G+    T 
Sbjct: 30  KEGMRGDSVRAVQKLLIGRGYLAEGEDDGVC-GKKTVTAITKFQQENGLEVDGICGQMTY 88

Query: 163 EAM 165
            A+
Sbjct: 89  RAL 91


>gi|260886933|ref|ZP_05898196.1| LysM domain protein [Selenomonas sputigena ATCC 35185]
 gi|260862995|gb|EEX77495.1| LysM domain protein [Selenomonas sputigena ATCC 35185]
          Length = 196

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    SV+ +++ LI  G L   +   V       +A+  FQ  +GL+  G+    T 
Sbjct: 26  KEGMRGDSVRAVQKLLIGRGYLAEGEDDGVC-GKKTVTAITKFQQENGLEVDGICGQMTY 84

Query: 163 EAM 165
            A+
Sbjct: 85  RAL 87


>gi|303246139|ref|ZP_07332420.1| Peptidoglycan-binding domain 1 protein [Desulfovibrio
           fructosovorans JJ]
 gi|302492535|gb|EFL52406.1| Peptidoglycan-binding domain 1 protein [Desulfovibrio
           fructosovorans JJ]
          Length = 579

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
              +V  L++ L+  G LDP   +  AF     +AV  FQ+  G++  G+V  +T  A+ 
Sbjct: 183 KGAAVVALQKALLGQG-LDPGP-IDGAFGPMTHAAVLSFQLMRGIEVDGVVGPATARALG 240

Query: 167 VP 168
           +P
Sbjct: 241 LP 242


>gi|170725529|ref|YP_001759555.1| peptidoglycan-binding domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169810876|gb|ACA85460.1| Peptidoglycan-binding domain 1 protein [Shewanella woodyi ATCC
           51908]
          Length = 538

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R +  G++   +Q L   L      + +  L   FD  +E  +K FQ +HGL    +  S
Sbjct: 457 REIGKGSNPAQIQWLENSLAKID--NTAPRLVSRFDIQLEEQLKRFQRKHGLRADAIAGS 514

Query: 160 STLEAMN 166
            TL  +N
Sbjct: 515 QTLVQLN 521


>gi|25029491|ref|NP_739545.1| putative hydrolase [Corynebacterium efficiens YS-314]
 gi|23494780|dbj|BAC19745.1| putative hydrolase [Corynebacterium efficiens YS-314]
          Length = 406

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 13/105 (12%)

Query: 101 PLHLGNS--SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               GN+     V  ++  L   G     + +   F  Y  SAV  +Q+ +GL   G+  
Sbjct: 105 SYQPGNNLVGDDVVEMQTHLQELGFY--RERIDGRFGEYTHSAVMDYQLNYGLQVDGICG 162

Query: 159 SSTLEAMN------VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
             T+ A++              Q +    R++    +  G R V+
Sbjct: 163 PDTIRALSRLGLRITGGSAHAIQER---ERVRSAGPRLAGKRVVI 204



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 13/77 (16%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL-------------SVAFDAYVESAVKLFQMR 148
           L +G+ S  V  +R  L   G ++                     FD  +   +K FQ  
Sbjct: 16  LRVGDRSPRVAEVRNTLARLGVIEGYDRDMATRSESRKFREEDTYFDDGLSEHLKAFQQA 75

Query: 149 HGLDPSGMVDSSTLEAM 165
            G+ P+G +D  TL  +
Sbjct: 76  RGIIPTGFIDDLTLRVL 92


>gi|311067736|ref|YP_003972659.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus atrophaeus 1942]
 gi|310868253|gb|ADP31728.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus atrophaeus 1942]
          Length = 319

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 4/95 (4%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP----SKGL 130
           I QT+   A   +  +    P   I+          V +++  L            + G+
Sbjct: 220 INQTQAKSAPVSESATAYPLPSGVIKLTSPLTKGTKVIQVQRALAALYFYPDKGAKNNGV 279

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              + A   +AVK FQ+ +GL   G+    T   M
Sbjct: 280 DGFYGAKTANAVKRFQLMNGLTADGIYGPKTKARM 314


>gi|259508327|ref|ZP_05751227.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           efficiens YS-314]
 gi|259164084|gb|EEW48638.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           efficiens YS-314]
          Length = 406

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 13/77 (16%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL-------------SVAFDAYVESAVKLFQMR 148
           L +G+ S  V  +R  L   G ++                     FD  +   +K FQ  
Sbjct: 16  LRVGDRSPRVAEVRNTLARLGVIEGYDRDMATRSESRKFREEDTYFDDGLSEHLKAFQQA 75

Query: 149 HGLDPSGMVDSSTLEAM 165
            G+ P+G +D  TL  +
Sbjct: 76  RGIIPTGFIDDLTLRVL 92



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 13/105 (12%)

Query: 101 PLHLGNS--SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               GN+     V  ++  L   G     + +   F  Y  SAV  +Q+ +GL   G+  
Sbjct: 105 SYQPGNNLVGDDVVEMQTHLQELGFY--RERIDGRFGEYTHSAVMDYQLNYGLQVDGICG 162

Query: 159 SSTLEAMN------VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
             T+ A++              Q +    R++    +  G R V+
Sbjct: 163 PDTIRALSRLGLRITGGSAHAIQER---ERVRSAGPRLAGKRVVI 204


>gi|94709138|sp|Q4L6D0|CTPAL_STAHJ RecName: Full=Probable CtpA-like serine protease
          Length = 496

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 9/87 (10%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
             T+ A   YQ I        +P  +   +G+++  V+ ++  L   G        S  F
Sbjct: 391 PDTKIASPQYQSI------SVIPTDKSYSVGDNTKYVKSIKIGLDALGY--NVNNDSKQF 442

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSST 161
           D  +ESA+K FQ  H L  +G  D  T
Sbjct: 443 DTQLESAIKKFQSEHELSVNGKFDKKT 469


>gi|70726487|ref|YP_253401.1| carboxy-terminal processing proteinase ctpA [Staphylococcus
           haemolyticus JCSC1435]
 gi|68447211|dbj|BAE04795.1| probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus haemolyticus JCSC1435]
          Length = 490

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 9/87 (10%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
             T+ A   YQ I        +P  +   +G+++  V+ ++  L   G        S  F
Sbjct: 385 PDTKIASPQYQSI------SVIPTDKSYSVGDNTKYVKSIKIGLDALGY--NVNNDSKQF 436

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSST 161
           D  +ESA+K FQ  H L  +G  D  T
Sbjct: 437 DTQLESAIKKFQSEHELSVNGKFDKKT 463


>gi|113475771|ref|YP_721832.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101]
 gi|110166819|gb|ABG51359.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101]
          Length = 216

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 55/215 (25%), Gaps = 89/215 (41%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             ++ A+K FQ   G+                               +            
Sbjct: 69  PKLDQAIKDFQKYLGIKA---------------------------EEL----------VR 91

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           V++ I    +   E  K      V VG+   +TP  + ++ +++ NP W  P +    ++
Sbjct: 92  VVLRIGERRVYVYEGEKEVASYPVAVGKPGWETPKGNFKVIQMVENPKWQNPWT---GEV 148

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--TKI 313
           M                                              G   A+       
Sbjct: 149 MP--------------------------------------------AGPNTALGLRWIGF 164

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               +++   H TP      +     + GCVR+ N
Sbjct: 165 WTDGKDSIGFHGTPTVGSIGS---AASHGCVRMYN 196


>gi|300114963|ref|YP_003761538.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus watsonii C-113]
 gi|299540900|gb|ADJ29217.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus watsonii C-113]
          Length = 356

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 47/161 (29%), Gaps = 46/161 (28%)

Query: 192 GLRYVLVNIPAASLEAV-----ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             R +++N+    L              +   + +GR    TP+  + +     NP WV 
Sbjct: 102 PRRGIVINLAEMRLYYFPEPSSAQPSTVVTHPIGIGREGWSTPLGRTSVISKKKNPAWVP 161

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI  +                                   ++ +      R  PG  N
Sbjct: 162 PESIRAE-----------------------------------HAADGNPLPKRVPPGPDN 186

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
            +   K         Y +H T  P      +R  + GC+R+
Sbjct: 187 PLG--KFAMRLGMPGYLIHGTNRPW--GVGMR-VSHGCIRL 222


>gi|158424653|ref|YP_001525945.1| putative chitinase [Azorhizobium caulinodans ORS 571]
 gi|158331542|dbj|BAF89027.1| putative chitinase [Azorhizobium caulinodans ORS 571]
          Length = 293

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           SV  L+ +L   G    + G    +    E AV+ FQ ++ L   G+    TL A+
Sbjct: 227 SVSDLQSKLNRLGYRLTADG---RYGPKTEEAVRDFQSKNDLKTDGIAGPVTLAAL 279


>gi|77164236|ref|YP_342761.1| hypothetical protein Noc_0717 [Nitrosococcus oceani ATCC 19707]
 gi|254436252|ref|ZP_05049759.1| ErfK/YbiS/YcfS/YnhG family [Nitrosococcus oceani AFC27]
 gi|76882550|gb|ABA57231.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207089363|gb|EDZ66635.1| ErfK/YbiS/YcfS/YnhG family [Nitrosococcus oceani AFC27]
          Length = 332

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 50/169 (29%), Gaps = 47/169 (27%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENG-----KVGLRSTVIVGRVDRQTPILHSRINRI 238
           + +L Q    + V++N+    L              +   + +GR    TP+  + +   
Sbjct: 95  RYVLPQA-PRKGVVINLAEMRLYYFPESPTAQPSTVVTHPIGIGREGWSTPLGRTSVISK 153

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
             NP WV P SI  +                                   ++ +      
Sbjct: 154 KKNPTWVPPESIRAE-----------------------------------HAADGDPLPK 178

Query: 299 RQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
              PG  N +   K         Y +H T  P      +R  + GC+R+
Sbjct: 179 IVPPGPDNPLG--KFAMRLGMPGYLIHGTNRPW--GVGMR-VSHGCIRL 222


>gi|190572272|ref|YP_001970117.1| hypothetical protein Smlt0193 [Stenotrophomonas maltophilia K279a]
 gi|190010194|emb|CAQ43802.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 663

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 7/84 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              G  S  V++++E+L   G +            F    ++AV+  Q  +GL   G+V 
Sbjct: 464 YKQGAHSEGVRKVQEQLGHLGYVGADGKPLVEDGRFGRNTDAAVRQLQKDNGLVADGIVG 523

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMR 182
           + TLEA+    + R R L +N  R
Sbjct: 524 AKTLEAI---KEARERPL-LNDER 543


>gi|308272301|emb|CBX28907.1| hypothetical protein N47_B20530 [uncultured Desulfobacterium sp.]
          Length = 262

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 10/97 (10%)

Query: 72  KETIAQTEKAIAF---YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++ +   + A+A     +     GG        L  G+   +V  L+E L   G      
Sbjct: 171 RKYLRMAKDALAVIDGMRVAADEGG----STVVLRRGSFGNAVGDLQELLRAKGY---DV 223

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   F    E AV  FQ   GL+  G+V ++T  A+
Sbjct: 224 TVDHDFGPATELAVMHFQKSTGLEKDGIVGNNTWTAL 260


>gi|186681402|ref|YP_001864598.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186463854|gb|ACC79655.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 283

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +V+ L+  L   G           F    E  VK FQ  +GL   G+V ++T   +
Sbjct: 119 DAVKELQIILNEEGFFKKEPDG--YFSRETERGVKRFQRTYGLKDDGIVGAATWAVL 173



 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +  R     ++  S+  L+ERL     L     +S  FD   E AV  FQ  + L   G
Sbjct: 35  PILYRGFSPNSAQESINELQERLQAQDFLS---TISGKFDLETEEAVIKFQKANNLQVDG 91

Query: 156 MVDS 159
           +V  
Sbjct: 92  IVGP 95


>gi|302536111|ref|ZP_07288453.1| predicted protein [Streptomyces sp. C]
 gi|302445006|gb|EFL16822.1| predicted protein [Streptomyces sp. C]
          Length = 387

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 3/86 (3%)

Query: 96  ELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +P+ R L  G+    V++L+  LI  G           F A   +AVK +Q  H    +
Sbjct: 118 AVPVYRALRAGDKGEDVRQLKRNLIALGYGTGLDAQDGTFTAGTAAAVKRWQKAHKAPET 177

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNL 180
           G V    +   + P   R+++ +  L
Sbjct: 178 GEVAREDIAFASGP--QRVKRTEAAL 201


>gi|169794743|ref|YP_001712536.1| putative phage-related cell wall hydrolase [Acinetobacter baumannii
           AYE]
 gi|169147670|emb|CAM85533.1| putative phage-related cell wall hydrolase [Acinetobacter baumannii
           AYE]
          Length = 280

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+   +V  L+++L   G     D    +   F    E AV   Q + GL   G V 
Sbjct: 7   LKFGSKGDAVATLQKQLAKMGYKGVKDKPLSVDGHFGESTEFAVIQLQRKFGLVADGKVG 66

Query: 159 SSTLEAM 165
             T +A+
Sbjct: 67  DKTRQAL 73


>gi|163791094|ref|ZP_02185514.1| carboxyl-terminal protease [Carnobacterium sp. AT7]
 gi|159873650|gb|EDP67734.1| carboxyl-terminal protease [Carnobacterium sp. AT7]
          Length = 496

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 7/94 (7%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           A+  Y ++L   G      +   LG+ S  V+ L + L   G       +   FD   + 
Sbjct: 390 ALPDYANLLIIDG-----SKTYQLGDVSEEVKNLEKVLDALGY--SVDTIDGYFDEATQK 442

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           AV  FQ+   L   G V   T   +   +   I 
Sbjct: 443 AVSQFQIDKKLPVDGKVTGETATQLVESLRKLID 476


>gi|239636899|ref|ZP_04677898.1| carboxy- processing protease [Staphylococcus warneri L37603]
 gi|239597573|gb|EEQ80071.1| carboxy- processing protease [Staphylococcus warneri L37603]
          Length = 493

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   LG+++  V+ ++  L   G        + +FD  +ESA+K FQ  + L  +G  D 
Sbjct: 407 KTYKLGDNNKHVKTMKIGLTALGF--KVDNETKSFDTSLESAIKAFQKDNDLTVNGEFDK 464

Query: 160 ST 161
            T
Sbjct: 465 ET 466


>gi|256785704|ref|ZP_05524135.1| serine/threonine protein kinase [Streptomyces lividans TK24]
 gi|289769597|ref|ZP_06528975.1| serine/threonine protein kinase [Streptomyces lividans TK24]
 gi|289699796|gb|EFD67225.1| serine/threonine protein kinase [Streptomyces lividans TK24]
          Length = 452

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 26/61 (42%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V+ L+  L     +     +   F    + AV  FQ R GLD  G+V  +T  A
Sbjct: 386 GDGGSQVRELQCLLRYLHGITAVGEVDGDFGPMTQGAVLTFQERAGLDADGIVGPATWRA 445

Query: 165 M 165
           +
Sbjct: 446 L 446


>gi|108759124|ref|YP_629455.1| hypothetical protein MXAN_1196 [Myxococcus xanthus DK 1622]
 gi|108463004|gb|ABF88189.1| hypothetical protein MXAN_1196 [Myxococcus xanthus DK 1622]
          Length = 205

 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 7/70 (10%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L +  L   ++      LR RL+  G L        A    +  AV  FQ  +GL P+G
Sbjct: 137 TLSLGTLQPVSTEEG---LRARLVNLGFLADEASEEDA----LSEAVARFQAEYGLMPNG 189

Query: 156 MVDSSTLEAM 165
            VD  T   +
Sbjct: 190 TVDERTRHKL 199


>gi|75908501|ref|YP_322797.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75702226|gb|ABA21902.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 198

 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  GNS V+V+ L+  L+  G      G    F A  E+AVK FQ++  L   G+V  +
Sbjct: 135 TLRFGNSGVAVRALQRLLVAKGYAVRVDGN---FGALTETAVKAFQIQRNLSVDGVVGFN 191

Query: 161 TLEAM 165
           T  ++
Sbjct: 192 TWYSL 196


>gi|120599845|ref|YP_964419.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|120559938|gb|ABM25865.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. W3-18-1]
          Length = 559

 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P LP+  +   +S   +Q L   L      + +      FD  +E+ +K FQ +HGL   
Sbjct: 473 PSLPMMEISQKSSVGQLQWLENALAHVS--NRNARRVTHFDLKLENDLKAFQSQHGLKAD 530

Query: 155 GMVDSSTLEAMN 166
           G+  + TL  +N
Sbjct: 531 GIAGNQTLVRLN 542


>gi|146292219|ref|YP_001182643.1| peptidoglycan binding domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|145563909|gb|ABP74844.1| Peptidoglycan-binding domain 1 protein [Shewanella putrefaciens
           CN-32]
 gi|319425519|gb|ADV53593.1| type II general secretion pathway protein A, GspA [Shewanella
           putrefaciens 200]
          Length = 559

 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P LP+  +   +S   +Q L   L      + +      FD  +E+ +K FQ +HGL   
Sbjct: 473 PSLPMMEISQKSSVGQLQWLENALAHVS--NRNARRVTHFDLKLENDLKAFQSQHGLKAD 530

Query: 155 GMVDSSTLEAMN 166
           G+  + TL  +N
Sbjct: 531 GIAGNQTLVRLN 542


>gi|257069740|ref|YP_003155995.1| cell wall-associated hydrolase, invasion-associated protein
           [Brachybacterium faecium DSM 4810]
 gi|256560558|gb|ACU86405.1| cell wall-associated hydrolase, invasion-associated protein
           [Brachybacterium faecium DSM 4810]
          Length = 372

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  GN   +V  L+++L  +G    S  +   F +   SAV+  Q   G+    +V   
Sbjct: 172 KLRQGNRGSAVTTLQKQLNSAG---ASLTVDGVFGSATGSAVRALQSAAGIGVDTVVGPK 228

Query: 161 TLEAMN 166
           T  A+N
Sbjct: 229 TWNALN 234



 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L LG    +V  L++RL   G    S  +   F +    AVK  Q    +   G+V   
Sbjct: 96  KLRLGARGAAVTYLQQRLNAHG---ASLKVDGVFGSATLRAVKNRQSSARIGVDGVVGPK 152

Query: 161 TLEAM 165
           T  A+
Sbjct: 153 TWNAL 157


>gi|330685052|gb|EGG96722.1| peptidase, S41 family [Staphylococcus epidermidis VCU121]
          Length = 493

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   LG+++  V+ ++  L   G        S +FD  +ESA+K FQ  + L  +G  D 
Sbjct: 407 KTYKLGDNNKHVKTMKIGLTALGF--KVDNESKSFDTSLESAIKAFQKDNDLTINGEFDK 464

Query: 160 ST 161
            T
Sbjct: 465 ET 466


>gi|295396865|ref|ZP_06806993.1| carboxy-terminal processing protease CtpA [Aerococcus viridans ATCC
           11563]
 gi|294974891|gb|EFG50590.1| carboxy-terminal processing protease CtpA [Aerococcus viridans ATCC
           11563]
          Length = 523

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G++S +++ +   L+  G  D        F     SAV   Q   GL  +G++
Sbjct: 435 TSQTYQEGDASGAIKNIEAILVALGYQDSEA--DAVFAEDTTSAVLALQADQGLPETGVI 492

Query: 158 DSSTLEAMNVPVDLRIRQLQVN 179
           D+ T  AM   +      +  N
Sbjct: 493 DTETASAM---ISAIQALIASN 511


>gi|288921344|ref|ZP_06415625.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
 gi|288347255|gb|EFC81551.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
          Length = 247

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 96  ELPIRPLHLGNSSVS--VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            +    + LG S     V  ++++L   G      G    F       V  FQ +HGL P
Sbjct: 177 TVDSGYMRLGVSGPRWDVSLVQDQLRKLGYPIVVDG---YFGPQTNHMVIDFQKKHGLVP 233

Query: 154 SGMVDSSTLEAM 165
            G++   T +A+
Sbjct: 234 DGVIGPLTHKAL 245


>gi|213857814|ref|ZP_03384785.1| hypothetical protein SentesT_22135 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 263

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTTNIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNA--GFGIGMR-VSSGCIRLRD 222


>gi|52787273|ref|YP_093102.1| petidoglycan binding protein [Bacillus licheniformis ATCC 14580]
 gi|319647802|ref|ZP_08002020.1| hypothetical protein HMPREF1012_03059 [Bacillus sp. BT1B_CT2]
 gi|52349775|gb|AAU42409.1| putative petidoglycan binding protein, contains PG_binding_1 domain
           [Bacillus licheniformis ATCC 14580]
 gi|317390143|gb|EFV70952.1| hypothetical protein HMPREF1012_03059 [Bacillus sp. BT1B_CT2]
          Length = 69

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 106 NSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
               +V++++E L            + G+   +     +AVK FQ  H L   G+    T
Sbjct: 1   MKGTAVRQIQEALAALYFYPDKGAKNNGIGGYYGPKTANAVKRFQHMHRLSADGIYGPKT 60

Query: 162 LEAM 165
              +
Sbjct: 61  KAKL 64


>gi|16760090|ref|NP_455707.1| hypothetical protein STY1255 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142139|ref|NP_805481.1| hypothetical protein t1705 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213161680|ref|ZP_03347390.1| hypothetical protein Salmoneentericaenterica_17412 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213425038|ref|ZP_03357788.1| hypothetical protein SentesTyphi_04655 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213649270|ref|ZP_03379323.1| hypothetical protein SentesTy_19505 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|289829624|ref|ZP_06547179.1| hypothetical protein Salmonellentericaenterica_23664 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25323528|pir||AH0644 probable exported protein STY1255 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16502384|emb|CAD08339.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137768|gb|AAO69330.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 263

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTTNIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNA--GFGIGMR-VSSGCIRLRD 222


>gi|294664257|ref|ZP_06729629.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
            aurantifolii str. ICPB 10535]
 gi|292605967|gb|EFF49246.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
            aurantifolii str. ICPB 10535]
          Length = 1268

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 10/112 (8%)

Query: 59   VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-------LHLGNSSVSV 111
            V    ++  P  +  ++     A +             +P  P       L LG+    V
Sbjct: 897  VQPKAEAVAPPSASASVPSVGSAASTLTSREEALTQATVPTPPSFQEVEGLRLGDRGQEV 956

Query: 112  QRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            + L+ RL       P   +   +  F    E AVK FQ   GL  +G+    
Sbjct: 957  EFLQYRLQQVDARGPDGQAVPQNGHFGPETEHAVKQFQQDQGLPATGIAGQD 1008


>gi|298493157|ref|YP_003723334.1| peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
 gi|298235075|gb|ADI66211.1| Peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
          Length = 358

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 3/90 (3%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q I +      + +  L  G     V+ ++ +L   G  +    +   + +  ++AV  F
Sbjct: 35  QAITATPKSAPIQLMVLSPGVRGAEVEVIQVQLKALGYYN--DLIDGQYGSSTQNAVTRF 92

Query: 146 QMRHGL-DPSGMVDSSTLEAMNVPVDLRIR 174
           Q   G     G+   ST + +   +  RI+
Sbjct: 93  QQEQGFKKADGIAYESTRQHLQEVLSRRIK 122


>gi|86741674|ref|YP_482074.1| peptidoglycan binding domain-containing protein [Frankia sp. CcI3]
 gi|86568536|gb|ABD12345.1| Peptidoglycan-binding domain 1 [Frankia sp. CcI3]
          Length = 249

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            V ++++RL   G      G    F       VK FQ++HGL   G+V   T   + +
Sbjct: 195 DVHQIQKRLASLGYPISVDGK---FGYQTNHMVKDFQLKHGLVVDGIVGPQTRAKLGI 249


>gi|251797379|ref|YP_003012110.1| spore cortex-lytic enzyme [Paenibacillus sp. JDR-2]
 gi|247545005|gb|ACT02024.1| spore cortex-lytic enzyme [Paenibacillus sp. JDR-2]
          Length = 264

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                 L +G+S   V  L+ RL   G  + +   S  F    ++AV  FQ + G+   G
Sbjct: 33  TFSNATLTVGSSGSDVYELQGRLKYLGYYNGAIDGS--FGTKTKNAVTWFQWKFGMKSDG 90

Query: 156 MVDSST 161
           +V + T
Sbjct: 91  VVGAKT 96


>gi|326202068|ref|ZP_08191938.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM
           2782]
 gi|325987863|gb|EGD48689.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM
           2782]
          Length = 236

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           R L  G+    V  ++ERL   G     +  S  ++  +++AV  FQ  H L  
Sbjct: 167 RNLKPGDRGADVLAVQERLKQLGYFHGYE--SGIYEDDLKNAVFQFQKDHNLKV 218


>gi|257142668|ref|ZP_05590930.1| bacteriophage-acquired protein [Burkholderia thailandensis E264]
          Length = 270

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q    L   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAASLVVDGIAGPKT 60

Query: 162 LEAM 165
              +
Sbjct: 61  YRVL 64


>gi|17229353|ref|NP_485901.1| hypothetical protein all1861 [Nostoc sp. PCC 7120]
 gi|17130951|dbj|BAB73560.1| all1861 [Nostoc sp. PCC 7120]
          Length = 269

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 13/74 (17%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L LG+   +V  ++  + +          +  + A     V+ FQ  +GL   G+V   
Sbjct: 139 TLRLGSRGQAVSAVQRAIGVE--------PTGYYGAVTARRVREFQANNGLRADGIVGPQ 190

Query: 161 TLEAM-----NVPV 169
           T  A+     N P 
Sbjct: 191 TRNALFRGNQNQPP 204



 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 12/90 (13%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
            QT  A+       ++   P      L  G+   +V  ++  L +          +  + 
Sbjct: 189 PQTRNALFR----GNQNQPPTGGPVTLGFGSRGSAVSEVQRALGVE--------PTGYYG 236

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                 V+ FQ  +GL   G+V   T  A+
Sbjct: 237 TVTVRRVREFQANNGLRVDGVVGPETRSAL 266


>gi|111222214|ref|YP_713008.1| putative N-acetylmuramoyl-L-alanine amidase [Frankia alni ACN14a]
 gi|111149746|emb|CAJ61438.1| putative N-acetylmuramoyl-L-alanine amidase precursor (Cell wall
           hydrolase) (Autolysin) [Frankia alni ACN14a]
          Length = 124

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 24/51 (47%)

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            + G  D    +  A+     +AV+ FQ RHGL P G V   T   + VPV
Sbjct: 3   YLLGAHDLRVPVDGAYGPRTVTAVREFQTRHGLTPDGQVGQRTWPVLIVPV 53


>gi|30249623|ref|NP_841693.1| hypothetical protein NE1659 [Nitrosomonas europaea ATCC 19718]
 gi|30138986|emb|CAD85570.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
          Length = 326

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 75/230 (32%), Gaps = 73/230 (31%)

Query: 185 KLLEQK-----MGLRYVL---------VNIPAASLEAV---ENGK--VGLRSTVIVGRVD 225
           + L +      + LR+++         +N+P   L        G+    +   V +GR+D
Sbjct: 78  RWLPEDGAEVVLPLRFIIPQAERIGLVINLPEMRLYYFPKPAKGQKPEIITHPVSIGRMD 137

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
             TP+  + I R   +P W  P+S+  + +                     +GK    + 
Sbjct: 138 WNTPLGRTTIVRKQKDPTWTPPQSLKAEAI--------------------AEGKPPLSDV 177

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-------MHDTPEPILFNNVVRF 338
           V               PG  N +             Y       +H T +P  F   +R 
Sbjct: 178 V--------------PPGPDNPLGR--------YALYLGLPGYLIHSTNKP--FGVGMR- 212

Query: 339 ETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
            T GC+R+   +I +L   +   TP        ++        ++L   +
Sbjct: 213 VTHGCMRLYPEDIEELFNLVPTGTPVQIVNQPVKLGWQENLLFIELHPPL 262


>gi|288916828|ref|ZP_06411201.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
 gi|288351713|gb|EFC85917.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
          Length = 209

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G    +V   + RL ++  L     +  AF    ++A + FQ  HGL   G+V   T
Sbjct: 142 LQVGAFGAAVATWQWRLRLA--LHRDLTVDEAFGPLTQAATRDFQSSHGLVVDGVVGPVT 199

Query: 162 LEAM 165
              M
Sbjct: 200 RARM 203


>gi|213583711|ref|ZP_03365537.1| hypothetical protein SentesTyph_21815 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 35

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 12/31 (38%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
               +   +  AVK FQ   GL   G++   
Sbjct: 5   TDNIYTPELVEAVKRFQQWQGLTDDGVIGPR 35


>gi|293189417|ref|ZP_06608137.1| putative surface protein PspA [Actinomyces odontolyticus F0309]
 gi|292821507|gb|EFF80446.1| putative surface protein PspA [Actinomyces odontolyticus F0309]
          Length = 513

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G +   V+  R RL +            + DA   +AVK FQ R GL  +G+VD
Sbjct: 290 TNTLTWGMNGTKVRIARVRLGLW-----HSNKLASVDAPFVAAVKNFQQRAGLPVTGVVD 344

Query: 159 SSTLEAMNVPVDLRIRQ 175
            +T +AM+      + Q
Sbjct: 345 KATWDAMDTGYPWTVDQ 361


>gi|154505139|ref|ZP_02041877.1| hypothetical protein RUMGNA_02652 [Ruminococcus gnavus ATCC 29149]
 gi|153794618|gb|EDN77038.1| hypothetical protein RUMGNA_02652 [Ruminococcus gnavus ATCC 29149]
          Length = 484

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 15/121 (12%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPI-LHSRINRIMFNPYWV 245
           Q  G  Y  V++ A  +  V+NG+V L + V+ G     + TP  ++S +        W 
Sbjct: 348 QDWGNTYAEVDMSAQHMWYVQNGQVVLETDVVTGEPIPSKITPEGVYSLM--------WK 399

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P S++  D+     + P Y        +      V   +  W +         Q PG  
Sbjct: 400 QPNSVLVGDINPDTGE-PAYRTKVKY-WMQVTSSGVGFHDATWQTAFGGTLY--QIPGTG 455

Query: 306 N 306
           +
Sbjct: 456 S 456


>gi|16079643|ref|NP_390467.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221310519|ref|ZP_03592366.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314843|ref|ZP_03596648.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319764|ref|ZP_03601058.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324043|ref|ZP_03605337.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321312085|ref|YP_004204372.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis BSn5]
 gi|113674|sp|P24808|CWLA_BACSU RecName: Full=N-acetylmuramoyl-L-alanine amidase CwlA; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           Flags: Precursor
 gi|39874|emb|CAA35788.1| hydrolase [Bacillus subtilis]
 gi|142802|gb|AAA62676.1| N-Acetylmuramoyl-L-alanine amidase [Bacillus subtilis]
 gi|1217875|dbj|BAA06960.1| cell wall lytic enzyme (autolysin) [Bacillus subtilis]
 gi|1303768|dbj|BAA12424.1| CwlA [Bacillus subtilis]
 gi|2635035|emb|CAB14531.1| N-acetylmuramoyl-L-alanine amidase; skin element [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|320018359|gb|ADV93345.1| N-acetylmuramoyl-L-alanine amidase; skin element [Bacillus subtilis
           BSn5]
          Length = 272

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 4/64 (6%)

Query: 106 NSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
                V ++++ L            + G+   +      A++ FQ  +GL   G+    T
Sbjct: 204 MRGEKVTQIQKALAALYFYPDKGAKNNGIDGVYGPKTADAIRRFQSMYGLTQDGIYGPKT 263

Query: 162 LEAM 165
              +
Sbjct: 264 KAKL 267


>gi|284006311|emb|CBA71547.1| peptidoglycan-binding protein [Arsenophonus nasoniae]
          Length = 322

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 58/184 (31%), Gaps = 41/184 (22%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+    L     G    +   + +G++   TP + + +++++ NP W  P + I+K 
Sbjct: 115 IIVNLAELRLYYFPKGSNKVIVYPIGIGQLGANTPKMVTTVSQLIKNPTWT-PTANIRKR 173

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             A     P                                       G  N M    + 
Sbjct: 174 YAADGVILPAVF----------------------------------PAGPDNPMGLYALR 199

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                  Y +H T     F   +R  +SGC+R+    D++              I E +K
Sbjct: 200 LSYGKGQYLIHGTNAN--FGIGLR-VSSGCIRL-RPEDIEALFYSIPVGTRVQVINEPIK 255

Query: 374 TRKT 377
             K 
Sbjct: 256 YAKE 259


>gi|294631054|ref|ZP_06709614.1| peptidoglycan binding domain-containing protein [Streptomyces sp.
           e14]
 gi|292834387|gb|EFF92736.1| peptidoglycan binding domain-containing protein [Streptomyces sp.
           e14]
          Length = 282

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 29/146 (19%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P R L   G+S  SV+ L+ RL     L  +   +  +    E AV+ FQ + GL  +G 
Sbjct: 72  PARVLWSRGDSGRSVRELQARLRQIAWLSEAP--TGTYGPLTERAVRGFQSKRGLPATGR 129

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMR----IKKLL----------EQKMGLRYVLVNIPA 202
            D+ T   +            V + R     +              + +  R + ++  +
Sbjct: 130 TDTVTWRRL------------VAMTRAPGTWELYPMGGQPAGAPDARCLTGRVLCIDKTS 177

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQT 228
            +L  + +G+      V  G     T
Sbjct: 178 RTLRWMIDGRTLSTMAVRFGTQYTPT 203


>gi|289809529|ref|ZP_06540158.1| hypothetical protein Salmonellaentericaenterica_35902 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 182

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 28  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 86

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 87  ANPTWT-PTTNIR---------------------ARYKAQGIDLPAVV------------ 112

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 113 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNA--GFGIGMR-VSSGCIRLRD 158


>gi|225166762|ref|YP_002650747.1| hypothetical protein pC2C203U28_p029 [Clostridium botulinum]
 gi|253771405|ref|YP_003034242.1| peptidoglycan binding domain protein [Clostridium botulinum D str.
           1873]
 gi|225007426|dbj|BAH29522.1| conserved hypothetical protein [Clostridium botulinum]
 gi|253721382|gb|ACT33675.1| peptidoglycan binding domain protein [Clostridium botulinum D str.
           1873]
          Length = 266

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V +L++ L   G       +   F    ++ VK FQ  +GL  +G+VD  T
Sbjct: 2   LKQGDRGANVSKLQKTLKYLGY--SCGKIDGIFGESTKNQVKRFQKHNGLPANGIVDVVT 59

Query: 162 LEAM 165
            +++
Sbjct: 60  EKSL 63


>gi|213582012|ref|ZP_03363838.1| hypothetical protein SentesTyph_12759 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 249

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTTNIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNA--GFGIGMR-VSSGCIRLRD 222


>gi|332992109|gb|AEF02164.1| hypothetical protein ambt_03050 [Alteromonas sp. SN2]
          Length = 558

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAF----DAYVESAVKLFQMRHGLDPSGMVDSST 161
           +SS  ++ +R RLI  G L      +       D  +   +K FQ   G+   G     T
Sbjct: 38  DSSAYIRAIRARLIELGYLGEGHKFANRHNPQTDRILIKKIKQFQYDAGITQDGWAGKLT 97

Query: 162 LEAM 165
            + +
Sbjct: 98  WQVL 101


>gi|237795719|ref|YP_002863271.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
           657]
 gi|229262866|gb|ACQ53899.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
           657]
          Length = 281

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 5/113 (4%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAI--AFYQDILSRGGWPELPIRPLHLGNSSVSVQ 112
            + +      +  P  SK      +  +    Y ++ SR G+  LP      G      +
Sbjct: 167 LVGKTASTTSNSEPSTSKPVQTNKKHPLINQLYAEM-SRQGFNTLP--TCRQGARGNITK 223

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +++ LI  G    S G    F +    AVK FQ    L   G+V   T + +
Sbjct: 224 IIQQMLINIGYPVGSFGADGVFGSGTVVAVKSFQRDCNLGADGIVGRETWKVL 276


>gi|225851535|ref|YP_002731769.1| ErfK/YbiS/YcfS/YnhG family protein [Persephonella marina EX-H1]
 gi|225644873|gb|ACO03059.1| ErfK/YbiS/YcfS/YnhG family protein [Persephonella marina EX-H1]
          Length = 427

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 66/185 (35%), Gaps = 48/185 (25%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           R + L E++     + +N+    L     +++    +   V +G  + ++PI    I+  
Sbjct: 224 RKRLLPEKEFNFGEIYLNLSEKRLYYPVIIDDDPYVISIPVGIGTDENRSPIGDFFISEK 283

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
             NP W +P +I ++D                                       P+   
Sbjct: 284 RKNPAWYVPDNIKEED---------------------------------------PSLPD 304

Query: 299 RQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
              PG  N + +  +   +   TY +H T +   F   ++  + GC+R+ N     ++ L
Sbjct: 305 IVPPGPNNPLGTRAMRLSN--TTYLLHGTSKR--FGIGMK-VSHGCIRMYNEDVEALFDL 359

Query: 358 KDTPT 362
            +T T
Sbjct: 360 VETGT 364


>gi|315169844|gb|EFU13861.1| peptidase [Enterococcus faecalis TX1342]
          Length = 480

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV+  Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVRDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|75910951|ref|YP_325247.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75704676|gb|ABA24352.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 269

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 13/74 (17%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L LG+   +V  ++  + +          +  + A     V+ FQ  +GL   G+V   
Sbjct: 139 TLRLGSRGQAVSAVQRAIGVE--------PTGYYGAVTARRVREFQANNGLRADGIVGPE 190

Query: 161 TLEAM-----NVPV 169
           T  A+     N P 
Sbjct: 191 TRNALFRGNQNQPP 204



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 11/83 (13%)

Query: 86  QDILSRGGWPELPIR---PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           ++ L RG   + PI     L  G+   +V  ++  L +          +  +       V
Sbjct: 192 RNALFRGNQNQPPIGGPVTLSFGSRGSAVSEVQRALGVE--------PTGYYGTVTVRRV 243

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
           + FQ  +GL   G+V   T  A+
Sbjct: 244 REFQANNGLRVDGVVGPETRSAL 266


>gi|21223194|ref|NP_628973.1| serine/threonine protein kinase [Streptomyces coelicolor A3(2)]
 gi|9367447|emb|CAB97420.1| putative serine/threonine protein kinase [Streptomyces coelicolor
           A3(2)]
          Length = 452

 Score = 51.0 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 26/61 (42%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V+ L+  L     +     +   F    + AV  FQ R GLD  G+V  +T  A
Sbjct: 386 GDGGSQVRELQCLLRYLHGITAVGEVDGDFGPMTQGAVVTFQERAGLDADGIVGPATWRA 445

Query: 165 M 165
           +
Sbjct: 446 L 446


>gi|282927518|ref|ZP_06335135.1| carboxyl-terminal processing protease [Staphylococcus aureus A9765]
 gi|282592058|gb|EFB97084.1| carboxyl-terminal processing protease [Staphylococcus aureus A9765]
          Length = 496

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDKALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|253732059|ref|ZP_04866224.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253724192|gb|EES92921.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 496

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDKALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|87160602|ref|YP_494010.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195151|ref|YP_499952.1| hypothetical protein SAOUHSC_01427 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151221544|ref|YP_001332366.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161509587|ref|YP_001575246.1| peptidase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|221142075|ref|ZP_03566568.1| peptidase [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|258451079|ref|ZP_05699114.1| carboxyl-terminal protease [Staphylococcus aureus A5948]
 gi|284024420|ref|ZP_06378818.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           132]
 gi|294850746|ref|ZP_06791464.1| carboxyl-terminal processing protease [Staphylococcus aureus A9754]
 gi|304381001|ref|ZP_07363658.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|87126576|gb|ABD21090.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202709|gb|ABD30519.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150374344|dbj|BAF67604.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160368396|gb|ABX29367.1| S41A family carboxy-terminal peptidase [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|257861134|gb|EEV83947.1| carboxyl-terminal protease [Staphylococcus aureus A5948]
 gi|269940915|emb|CBI49299.1| putative protease [Staphylococcus aureus subsp. aureus TW20]
 gi|294822386|gb|EFG38837.1| carboxyl-terminal processing protease [Staphylococcus aureus A9754]
 gi|302751250|gb|ADL65427.1| serine protease [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340477|gb|EFM06414.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|315195854|gb|EFU26222.1| S41A family carboxy-terminal peptidase [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|320140334|gb|EFW32191.1| peptidase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142665|gb|EFW34468.1| peptidase [Staphylococcus aureus subsp. aureus MRSA177]
 gi|329314097|gb|AEB88510.1| Carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329730570|gb|EGG66956.1| peptidase, S41 family [Staphylococcus aureus subsp. aureus 21189]
          Length = 496

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDKALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|57650378|ref|YP_186306.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           COL]
 gi|81694508|sp|Q5HG01|CTPAL_STAAC RecName: Full=Probable CtpA-like serine protease
 gi|57284564|gb|AAW36658.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           COL]
          Length = 496

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDKALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|326391827|ref|ZP_08213343.1| carboxyl-terminal protease [Thermoanaerobacter ethanolicus JW 200]
 gi|325992133|gb|EGD50609.1| carboxyl-terminal protease [Thermoanaerobacter ethanolicus JW 200]
          Length = 457

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 35/180 (19%)

Query: 3   GYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG 62
            YL   K      +         ++   I  +    ++ E                    
Sbjct: 272 SYLNNPKYKLAVLINGNTASAAEILAGAIQDTKAGTLVGEKSFG-------------KGT 318

Query: 63  IDSDIPIISKETIAQTEKAIAFY-----QDILSRGGWPELPI------------RPLHLG 105
           + S +P+        T   IA Y     + I  +G  P++ +              L +G
Sbjct: 319 VQSVVPLPDGSGFKLT---IARYKLPSGRYIDKQGLKPDIYVVNTQYTPSIKFNGTLRVG 375

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +    V+ L++ L I      +      F     +AVK  Q + GL P+G+ D +T +A+
Sbjct: 376 SRGNDVKILQKNLNILKF--NAGPEDGIFGPKTANAVKELQKKAGLTPTGVFDKNTYDAL 433


>gi|295100343|emb|CBK97888.1| Putative peptidoglycan-binding domain-containing protein
           [Faecalibacterium prausnitzii L2-6]
          Length = 159

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 5/83 (6%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           A Y      G     P   L  G++   V+ ++++L   G+   + G    F     +AV
Sbjct: 78  ARYT--AKHGLIVPYPGIVLRSGSAGGCVRLVQQKLNTDGERLTTDG---RFGTSTVAAV 132

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
           K +Q RH L   G V   T E M
Sbjct: 133 KRYQTRHSLTSDGSVGKDTWEKM 155



 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +  G+S   V  ++  L    D      +  +   F A  E AV+ FQ+R+GL   G V 
Sbjct: 10  IRRGSSGPDVALVQTWLNGIRDSCTWYAALTVDGTFGANAEKAVREFQLRYGLKEDGKVG 69

Query: 159 SSTLEAM 165
           ++T   +
Sbjct: 70  ANTWNVL 76


>gi|194015260|ref|ZP_03053876.1| N-acetylmuramoyl-L-alanine amidase CwlA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
 gi|194012664|gb|EDW22230.1| N-acetylmuramoyl-L-alanine amidase CwlA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
          Length = 279

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 5/75 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRH-G 150
            +P   +  G    +V +L+  L            + G+   +     +AVK FQ    G
Sbjct: 194 AVPTGVIRQGARGTAVTQLQNALAAVYFYPDKGAKNNGIDGIYGPKTANAVKRFQSTQAG 253

Query: 151 LDPSGMVDSSTLEAM 165
           +   G+  S+T   +
Sbjct: 254 IANDGIYGSATRAKL 268


>gi|94968756|ref|YP_590804.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345]
 gi|94550806|gb|ABF40730.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345]
          Length = 205

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 49/162 (30%), Gaps = 53/162 (32%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           +E     R +LV+IP   L  +E+ KV     V VG+    +P     I   + NP    
Sbjct: 39  MEAPRPTRLILVSIPDRKLALLEDDKVVKVYPVAVGKDSTPSPEGTFTIKSHVTNPT--- 95

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                                         +GK V                    PG  N
Sbjct: 96  ---------------------------YYHEGKVV-------------------APGPQN 109

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            + S +    S     +H T  P    ++ +  + GC+R+  
Sbjct: 110 PLGS-RWMGLSEKGYGIHGTNAP---KSIGKAASHGCIRMAK 147


>gi|327393725|dbj|BAK11147.1| ErfK/YbiS/YcfS/YnhG family protein YcfS [Pantoea ananatis AJ13355]
          Length = 326

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 42/182 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                  ++VN+    L     G+   +   + +G++   TPI+ + I++ + NP W  P
Sbjct: 93  PDTPREGIVVNLAELRLYYYPKGEDKVIVYPIGIGQMGIVTPIMVTSISQKIPNPTWT-P 151

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            + I+K                 I +                             G  N 
Sbjct: 152 TANIRKRY-----------AKEGITL-----------------------PAVVPAGPDNP 177

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           M    +        Y +H T     F   +R  +SGC+R+R   +    L    P  +R 
Sbjct: 178 MGLHALRMARGTGQYLIHGTNAN--FGIGMR-VSSGCIRLR--TEDIEALFNSVPVGTRV 232

Query: 367 HI 368
            I
Sbjct: 233 QI 234


>gi|291617273|ref|YP_003520015.1| YcfS [Pantoea ananatis LMG 20103]
 gi|291152303|gb|ADD76887.1| YcfS [Pantoea ananatis LMG 20103]
          Length = 326

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 42/182 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                  ++VN+    L     G+   +   + +G++   TPI+ + I++ + NP W  P
Sbjct: 93  PDTPREGIVVNLAELRLYYYPKGEDKVIVYPIGIGQMGIVTPIMVTSISQKIPNPTWT-P 151

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            + I+K                 I +                             G  N 
Sbjct: 152 TANIRKRY-----------AKEGITL-----------------------PAVVPAGPDNP 177

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           M    +        Y +H T     F   +R  +SGC+R+R   +    L    P  +R 
Sbjct: 178 MGLHALRMARGTGQYLIHGTNAN--FGIGMR-VSSGCIRLR--TEDIEALFNSVPVGTRV 232

Query: 367 HI 368
            I
Sbjct: 233 QI 234


>gi|283470634|emb|CAQ49845.1| carboxy-processing protease [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 496

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|258422547|ref|ZP_05685455.1| carboxyl-terminal protease [Staphylococcus aureus A9635]
 gi|257847304|gb|EEV71310.1| carboxyl-terminal protease [Staphylococcus aureus A9635]
          Length = 496

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|148267907|ref|YP_001246850.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150393970|ref|YP_001316645.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           JH1]
 gi|253315257|ref|ZP_04838470.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253733333|ref|ZP_04867498.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257795525|ref|ZP_05644504.1| carboxyl-terminal protease [Staphylococcus aureus A9781]
 gi|258413333|ref|ZP_05681609.1| carboxyl-terminal protease [Staphylococcus aureus A9763]
 gi|258420560|ref|ZP_05683502.1| carboxyl-terminal protease [Staphylococcus aureus A9719]
 gi|258434668|ref|ZP_05688742.1| carboxyl-terminal protease [Staphylococcus aureus A9299]
 gi|258444756|ref|ZP_05693085.1| carboxyl-terminal protease [Staphylococcus aureus A8115]
 gi|258447410|ref|ZP_05695554.1| carboxyl-terminal protease [Staphylococcus aureus A6300]
 gi|258449251|ref|ZP_05697354.1| carboxyl-terminal protease [Staphylococcus aureus A6224]
 gi|258454630|ref|ZP_05702594.1| carboxyl-terminal protease [Staphylococcus aureus A5937]
 gi|269203042|ref|YP_003282311.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892915|ref|ZP_06301150.1| carboxyl-terminal processing protease [Staphylococcus aureus A8117]
 gi|282927946|ref|ZP_06335555.1| carboxyl-terminal processing protease [Staphylococcus aureus
           A10102]
 gi|295406366|ref|ZP_06816173.1| carboxyl-terminal processing protease [Staphylococcus aureus A8819]
 gi|296275280|ref|ZP_06857787.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297244595|ref|ZP_06928478.1| carboxyl-terminal processing protease [Staphylococcus aureus A8796]
 gi|147740976|gb|ABQ49274.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149946422|gb|ABR52358.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           JH1]
 gi|253728685|gb|EES97414.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257789497|gb|EEV27837.1| carboxyl-terminal protease [Staphylococcus aureus A9781]
 gi|257839897|gb|EEV64365.1| carboxyl-terminal protease [Staphylococcus aureus A9763]
 gi|257843508|gb|EEV67915.1| carboxyl-terminal protease [Staphylococcus aureus A9719]
 gi|257849029|gb|EEV73011.1| carboxyl-terminal protease [Staphylococcus aureus A9299]
 gi|257850249|gb|EEV74202.1| carboxyl-terminal protease [Staphylococcus aureus A8115]
 gi|257853601|gb|EEV76560.1| carboxyl-terminal protease [Staphylococcus aureus A6300]
 gi|257857239|gb|EEV80137.1| carboxyl-terminal protease [Staphylococcus aureus A6224]
 gi|257863013|gb|EEV85777.1| carboxyl-terminal protease [Staphylococcus aureus A5937]
 gi|262075332|gb|ACY11305.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282590243|gb|EFB95323.1| carboxyl-terminal processing protease [Staphylococcus aureus
           A10102]
 gi|282764912|gb|EFC05037.1| carboxyl-terminal processing protease [Staphylococcus aureus A8117]
 gi|285817098|gb|ADC37585.1| Probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus aureus 04-02981]
 gi|294968954|gb|EFG44976.1| carboxyl-terminal processing protease [Staphylococcus aureus A8819]
 gi|297178625|gb|EFH37871.1| carboxyl-terminal processing protease [Staphylococcus aureus A8796]
 gi|312829814|emb|CBX34656.1| C-terminal processing peptidase family protein [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315129129|gb|EFT85124.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329727143|gb|EGG63599.1| peptidase, S41 family [Staphylococcus aureus subsp. aureus 21172]
          Length = 496

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|15924410|ref|NP_371944.1| carboxy-terminal processing proteinase [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|15927001|ref|NP_374534.1| carboxy-terminal processing proteinase ctpA [Staphylococcus aureus
           subsp. aureus N315]
 gi|156979739|ref|YP_001441998.1| carboxy-terminal processing proteinase [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|255006209|ref|ZP_05144810.2| carboxy-terminal processing proteinase [Staphylococcus aureus
           subsp. aureus Mu50-omega]
 gi|81705698|sp|Q7A5M9|CTPAL_STAAN RecName: Full=Probable CtpA-like serine protease
 gi|81781605|sp|Q99U67|CTPAL_STAAM RecName: Full=Probable CtpA-like serine protease
 gi|13701218|dbj|BAB42513.1| probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus aureus subsp. aureus N315]
 gi|14247191|dbj|BAB57582.1| probable carboxy-terminal processing proteinase [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|156721874|dbj|BAF78291.1| probable carboxy-terminal processing proteinase [Staphylococcus
           aureus subsp. aureus Mu3]
          Length = 496

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|163759276|ref|ZP_02166362.1| hypothetical protein HPDFL43_05910 [Hoeflea phototrophica DFL-43]
 gi|162283680|gb|EDQ33965.1| hypothetical protein HPDFL43_05910 [Hoeflea phototrophica DFL-43]
          Length = 236

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++ L+ERL   G       +  A       AV+ FQ  HGL   G+    T  A+
Sbjct: 4   IRDLQERLKALGY--NPGIVDGAMGPNTRKAVREFQADHGLGIDGVAGPRTWSAL 56


>gi|17232825|ref|NP_489373.1| hypothetical protein alr5333 [Nostoc sp. PCC 7120]
 gi|17134472|dbj|BAB77032.1| alr5333 [Nostoc sp. PCC 7120]
          Length = 130

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 6/72 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+ ++  L   G  + +  L   +      AV  FQ    L   G V   T
Sbjct: 56  LRPGSRGQAVRDVQAVLQSLGFYNGA--LDGIYGLRTARAVAAFQRSQRLVGDGRVGKLT 113

Query: 162 LEAM----NVPV 169
            +A+    N+P 
Sbjct: 114 WQALRNSKNIPP 125


>gi|281418662|ref|ZP_06249681.1| peptidase M14 carboxypeptidase A [Clostridium thermocellum JW20]
 gi|281407746|gb|EFB38005.1| peptidase M14 carboxypeptidase A [Clostridium thermocellum JW20]
          Length = 423

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+    V+  +  L   G   P   +   +      AV  FQ  +GL   G+V  +T
Sbjct: 4   LRLGSVGPDVKLAQSLLNKIGY--PVGAVDGIYGTRTRQAVIAFQRNNGLVADGIVGPAT 61

Query: 162 LE 163
             
Sbjct: 62  WS 63


>gi|256003872|ref|ZP_05428859.1| peptidase M14 carboxypeptidase A [Clostridium thermocellum DSM
           2360]
 gi|255992210|gb|EEU02305.1| peptidase M14 carboxypeptidase A [Clostridium thermocellum DSM
           2360]
 gi|316939083|gb|ADU73117.1| peptidase M14 carboxypeptidase A [Clostridium thermocellum DSM
           1313]
          Length = 423

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+    V+  +  L   G   P   +   +      AV  FQ  +GL   G+V  +T
Sbjct: 4   LRLGSVGPDVKLAQSLLNKIGY--PVGAVDGIYGTRTRQAVIAFQRNNGLVADGIVGPAT 61

Query: 162 LE 163
             
Sbjct: 62  WS 63


>gi|224826478|ref|ZP_03699580.1| Peptidoglycan-binding domain 1 protein [Lutiella nitroferrum 2002]
 gi|224601579|gb|EEG07760.1| Peptidoglycan-binding domain 1 protein [Lutiella nitroferrum 2002]
          Length = 553

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 94  WPELP--IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P    PL  G+  + V  L  +     +   +   +  FDA +E  V  FQ   GL
Sbjct: 457 WKAPPNYRAPLARGSRGLMVSWLNHQFGQPLEPLAATAKNPVFDARLEEQVMRFQRADGL 516

Query: 152 DPSGMVDSSTL 162
              G+V   TL
Sbjct: 517 PSDGIVGPHTL 527


>gi|168333614|ref|ZP_02691874.1| spore cortex-lytic enzyme SleC [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 145

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 3/89 (3%)

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDA 136
           K I F +     G     P   + +GN   +V+ ++E+L        L P    +  F  
Sbjct: 43  KNIEFKEAKAVYGNPESFPGYSIKIGNEGAAVRTIQEQLNRISQSYPLIPKVPSNGVFGE 102

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             E A+K+FQ    L P G+V  +T   +
Sbjct: 103 KTEEAIKVFQKVFYLAPDGVVGKATWYKL 131


>gi|312438178|gb|ADQ77249.1| carboxy-terminal processing protease [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 496

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENLVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|213022863|ref|ZP_03337310.1| hypothetical protein Salmonelentericaenterica_09678 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 252

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTTNIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNA--GFGIGMR-VSSGCIRLRD 222


>gi|49483610|ref|YP_040834.1| protease [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257425484|ref|ZP_05601909.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428144|ref|ZP_05604542.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430776|ref|ZP_05607158.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433535|ref|ZP_05609893.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436376|ref|ZP_05612423.1| carboxy-terminal processing proteinase ctpA [Staphylococcus aureus
           subsp. aureus M876]
 gi|282904003|ref|ZP_06311891.1| carboxyl- protease [Staphylococcus aureus subsp. aureus C160]
 gi|282905765|ref|ZP_06313620.1| ctpA-family serine protease [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908737|ref|ZP_06316555.1| peptidase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282914211|ref|ZP_06321998.1| carboxyl- protease [Staphylococcus aureus subsp. aureus M899]
 gi|282919133|ref|ZP_06326868.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           C427]
 gi|282924316|ref|ZP_06331990.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           C101]
 gi|283958185|ref|ZP_06375636.1| carboxyl- protease [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293501235|ref|ZP_06667086.1| ctpA serine protease [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510198|ref|ZP_06668906.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526791|ref|ZP_06671476.1| carboxyl- protease [Staphylococcus aureus subsp. aureus M1015]
 gi|295427933|ref|ZP_06820565.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591105|ref|ZP_06949743.1| carboxy-terminal processing protease [Staphylococcus aureus subsp.
           aureus MN8]
 gi|81696485|sp|Q6GGY8|CTPAL_STAAR RecName: Full=Probable CtpA-like serine protease
 gi|49241739|emb|CAG40429.1| putative protease [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257271941|gb|EEV04079.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274985|gb|EEV06472.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278904|gb|EEV09523.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281628|gb|EEV11765.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284658|gb|EEV14778.1| carboxy-terminal processing proteinase ctpA [Staphylococcus aureus
           subsp. aureus M876]
 gi|282313703|gb|EFB44096.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316943|gb|EFB47317.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322279|gb|EFB52603.1| carboxyl- protease [Staphylococcus aureus subsp. aureus M899]
 gi|282327001|gb|EFB57296.1| peptidase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282331057|gb|EFB60571.1| ctpA-family serine protease [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595621|gb|EFC00585.1| carboxyl- protease [Staphylococcus aureus subsp. aureus C160]
 gi|283790334|gb|EFC29151.1| carboxyl- protease [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290920863|gb|EFD97926.1| carboxyl- protease [Staphylococcus aureus subsp. aureus M1015]
 gi|291096240|gb|EFE26501.1| ctpA serine protease [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467142|gb|EFF09660.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128291|gb|EFG57925.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575991|gb|EFH94707.1| carboxy-terminal processing protease [Staphylococcus aureus subsp.
           aureus MN8]
 gi|315195315|gb|EFU25702.1| putative protease [Staphylococcus aureus subsp. aureus CGS00]
          Length = 496

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENLVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|332671624|ref|YP_004454632.1| peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
 gi|332340662|gb|AEE47245.1| Peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
          Length = 635

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R L  G++   V+  ++RL   G   P       F    ++A   +Q  HGL P  ++ 
Sbjct: 78  VRMLRRGHTGEDVRHAQDRLNAHGAAPPLVTDG-IFGPLTQAATTQYQRTHGLSPDAVIG 136

Query: 159 SSTLEAMNVPVDL 171
             T  ++  P D+
Sbjct: 137 PRTSASLEGPTDV 149


>gi|326777088|ref|ZP_08236353.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657421|gb|EGE42267.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 343

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 4/129 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+ S  V+ L+ RL   G     +  +  + +    AV+ FQ +  L  +G  D+ T
Sbjct: 138 MRTGSESDRVRELQARLRQIGHF--GRNPTGYYGSVTADAVRSFQAKRRLPVTGSTDAVT 195

Query: 162 L-EAMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTV 219
               + +       +L     R     +++ +  R + ++  + +L  + +GKV     V
Sbjct: 196 WQRLLAMTRVPTAEELDPPTERPLAAPDERCLKGRVLCISKESRTLAWMRDGKVLSAMDV 255

Query: 220 IVGRVDRQT 228
             G     T
Sbjct: 256 RFGSEYTPT 264


>gi|309810394|ref|ZP_07704228.1| Tat pathway signal sequence domain protein [Dermacoccus sp.
           Ellin185]
 gi|308435634|gb|EFP59432.1| Tat pathway signal sequence domain protein [Dermacoccus sp.
           Ellin185]
          Length = 233

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V  L++RL   G    +     AF A  + AV   Q   GL   G+V + +
Sbjct: 39  LQTGSKGSAVTTLQKRLNALGYWCGNPDG--AFGAQTKQAVLAVQKVAGLARDGVVGARS 96

Query: 162 LEAMN--VPVDLR 172
            +A+N  V    R
Sbjct: 97  WDALNRGVRPSSR 109


>gi|218782967|ref|YP_002434285.1| peptidoglycan-binding domain 1 protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764351|gb|ACL06817.1| Peptidoglycan-binding domain 1 protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 616

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           I  + LG+    V  +++ LI  G    S      +      A+K FQ   G+   G+  
Sbjct: 541 INRIGLGDKGPLVNWIQDVLIHGGY---SLSKDGVYGPRTSKAIKSFQTDFGIRADGVAG 597

Query: 159 SSTLEAM 165
            +T+  M
Sbjct: 598 PTTIGLM 604


>gi|125974872|ref|YP_001038782.1| gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I. metallo
           peptidase. MEROPS family M14C [Clostridium thermocellum
           ATCC 27405]
 gi|125715097|gb|ABN53589.1| gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I, Metallo
           peptidase, MEROPS family M14C [Clostridium thermocellum
           ATCC 27405]
          Length = 423

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+    V+  +  L   G   P   +   +      AV  FQ  +GL   G+V  +T
Sbjct: 4   LRLGSVGPDVKLAQSLLNKIGY--PVGAVDGIYGTRTRQAVIAFQRNNGLVADGIVGPAT 61

Query: 162 LE 163
             
Sbjct: 62  WS 63


>gi|329731573|gb|EGG67935.1| peptidase, S41 family [Staphylococcus epidermidis VCU144]
          Length = 490

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G   P    +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 404 KTYHQGEKDKNVKTMKIGLKALGY--PIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 461

Query: 160 ST 161
            T
Sbjct: 462 KT 463


>gi|311068639|ref|YP_003973562.1| carboxy-terminal processing protease [Bacillus atrophaeus 1942]
 gi|310869156|gb|ADP32631.1| carboxy-terminal processing protease [Bacillus atrophaeus 1942]
          Length = 466

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 14/111 (12%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            Q + A+  Y  +      P L   +    G+S  +V+  ++ L   G       ++  +
Sbjct: 359 PQVKAALPDYAKL------PYLDADKTYKSGDSGNNVKVAQQMLKALGY---KVNVNSTY 409

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSST----LEAMNVPVDLRIRQLQVNLM 181
           D   E+ VK FQ +  L  +G++   T    +  +   +     Q++  + 
Sbjct: 410 DKAFETVVKQFQAKEKLKETGVLTGDTTTKLMTELQGKLSDNDTQMKQAIE 460


>gi|251810854|ref|ZP_04825327.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876140|ref|ZP_06285007.1| C-terminal processing peptidase [Staphylococcus epidermidis SK135]
 gi|251805534|gb|EES58191.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295165|gb|EFA87692.1| C-terminal processing peptidase [Staphylococcus epidermidis SK135]
 gi|329737198|gb|EGG73452.1| peptidase, S41 family [Staphylococcus epidermidis VCU028]
          Length = 491

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G   P    +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 405 KTYHQGEKDKNVKTMKIGLKALGY--PIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 462

Query: 160 ST 161
            T
Sbjct: 463 KT 464


>gi|57866912|ref|YP_188573.1| carboxyl-terminal protease [Staphylococcus epidermidis RP62A]
 gi|81674603|sp|Q5HPB7|CTPAL_STAEQ RecName: Full=Probable CtpA-like serine protease
 gi|57637570|gb|AAW54358.1| carboxyl-terminal protease [Staphylococcus epidermidis RP62A]
          Length = 491

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G   P    +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 405 KTYHQGEKDKNVKTMKIGLKALGY--PIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 462

Query: 160 ST 161
            T
Sbjct: 463 KT 464


>gi|27468031|ref|NP_764668.1| carboxy-terminal processing protease [Staphylococcus epidermidis
           ATCC 12228]
 gi|293366606|ref|ZP_06613283.1| carboxy-terminal processing protease [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|81843763|sp|Q8CSK8|CTPAL_STAES RecName: Full=Probable CtpA-like serine protease
 gi|27315576|gb|AAO04710.1|AE016747_207 carboxy-terminal processing protease [Staphylococcus epidermidis
           ATCC 12228]
 gi|291319375|gb|EFE59744.1| carboxy-terminal processing protease [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329735325|gb|EGG71617.1| peptidase, S41 family [Staphylococcus epidermidis VCU045]
          Length = 491

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G   P    +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 405 KTYHQGEKDKNVKTMKIGLKALGY--PIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 462

Query: 160 ST 161
            T
Sbjct: 463 KT 464


>gi|257064653|ref|YP_003144325.1| negative regulator of beta-lactamase expression [Slackia
           heliotrinireducens DSM 20476]
 gi|256792306|gb|ACV22976.1| negative regulator of beta-lactamase expression [Slackia
           heliotrinireducens DSM 20476]
          Length = 248

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               V++L+  L   G      G S  FDAY E A++ FQ+  GL+P G+    T + +
Sbjct: 29  QGQDVEQLQTALGALGF--ACGGASGTFDAYTEGALRKFQLNMGLEPDGIAGLKTYDTL 85


>gi|56963703|ref|YP_175434.1| cell wall lytic activity [Bacillus clausii KSM-K16]
 gi|56909946|dbj|BAD64473.1| cell wall lytic activity [Bacillus clausii KSM-K16]
          Length = 307

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 8/65 (12%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  G+ + +V+ ++ +L I  D          F    E  V+ FQ  +GL   G+V  +
Sbjct: 70  TVRFGDRNETVREVQAKLGIPAD--------GIFGPQTEKEVREFQANNGLAADGIVGPA 121

Query: 161 TLEAM 165
           T +A+
Sbjct: 122 TKKAL 126


>gi|23008969|ref|ZP_00050195.1| COG3409: Putative peptidoglycan-binding domain-containing protein
           [Magnetospirillum magnetotacticum MS-1]
          Length = 151

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 8/94 (8%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN--VP 168
           +  L++RL   G    +      F    + AV   Q   GL   G+V  +T  A++  V 
Sbjct: 1   MVALQQRLADLGYFIGAPDGD--FGGGTQQAVWALQKAAGLSRDGVVGPATQAALDEGVT 58

Query: 169 VDLRI---RQLQVNLMRIKKLLEQKMGLRYVLVN 199
              R    + ++++L R + LL  + G    +VN
Sbjct: 59  PQPRSGSGKVVEIDLDR-QLLLAVEDGRVVTVVN 91


>gi|153953613|ref|YP_001394378.1| gamma-D-glutamyl-L-diamino acid endopeptidase [Clostridium kluyveri
           DSM 555]
 gi|219854235|ref|YP_002471357.1| hypothetical protein CKR_0892 [Clostridium kluyveri NBRC 12016]
 gi|146346494|gb|EDK33030.1| Predicted gamma-D-glutamyl-L-diamino acid endopeptidase
           [Clostridium kluyveri DSM 555]
 gi|219567959|dbj|BAH05943.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 423

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             LG+    V  ++  L   G       +   +    + AV++FQ  HGL   G++  +T
Sbjct: 4   FKLGSRGTEVMHIQATLKKIGY--NPGVIDGIYGTDTKKAVEIFQRNHGLIVDGIIGPNT 61

Query: 162 LEAM 165
              +
Sbjct: 62  YRIL 65


>gi|328884811|emb|CCA58050.1| hypothetical protein SVEN_4764 [Streptomyces venezuelae ATCC 10712]
          Length = 380

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 11/95 (11%)

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GG P  P+ PL   G++   V+ L+  L   G          +F    E AV+ FQ    
Sbjct: 243 GGDPAPPVWPLLRTGDTGERVRALQHLLAGRG---APLVPDGSFGPATEQAVRDFQRLVR 299

Query: 151 LDPSGMVDSSTLEAMNVPV-------DLRIRQLQV 178
             P G+    T   + VPV        +R  Q+ +
Sbjct: 300 ARPDGLAGDQTWHQLGVPVRAGDAGEAVRAVQVLL 334



 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 12/98 (12%)

Query: 76  AQTEKAIAFYQDILSR--------GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
             TE+A+  +Q ++            W +L + P+  G++  +V+ ++  L   G    +
Sbjct: 285 PATEQAVRDFQRLVRARPDGLAGDQTWHQLGV-PVRAGDAGEAVRAVQVLLGARGVPAEA 343

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            GL   F     +AV  FQ   GL   G+VD+ TL  +
Sbjct: 344 DGL---FGPGTAAAVASFQSGAGLPADGLVDARTLGRL 378


>gi|305673895|ref|YP_003865567.1| putative phage N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. spizizenii str. W23]
 gi|305412139|gb|ADM37258.1| putative phage N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 207

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 7/64 (10%)

Query: 109 VSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST--- 161
            +V++++  L         K    G+   +      AV+ FQ+ +GL   G+    T   
Sbjct: 142 DAVEQIQTALAALHFYPDKKAKNFGIDSYYGPQTADAVRRFQLMYGLSADGIYGPKTKAK 201

Query: 162 LEAM 165
           +EA+
Sbjct: 202 IEAL 205


>gi|182436464|ref|YP_001824183.1| hypothetical protein SGR_2671 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178464980|dbj|BAG19500.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 206

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 4/129 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+ S  V+ L+ RL   G     +  +  + +    AV+ FQ +  L  +G  D+ T
Sbjct: 1   MRTGSESDRVRELQARLRQIGHF--GRNPTGYYGSVTADAVRSFQAKRRLPVTGSTDAVT 58

Query: 162 L-EAMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTV 219
               + +       +L     R     +++ +  R + ++  + +L  + +GKV     V
Sbjct: 59  WQRLLAMTRVPTAEELDPPTERPLAAPDERCLKGRVLCISKESRTLAWMRDGKVLSAMDV 118

Query: 220 IVGRVDRQT 228
             G     T
Sbjct: 119 RFGSEYTPT 127


>gi|225452586|ref|XP_002275671.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 303

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA-------FDAYVESAVKLFQMRHGLDPSG 155
             G+    + ++++ L   G L  +   +         FD  +ESA+K FQ  + L P+G
Sbjct: 43  QKGDKVEGIHKVKKYLQHFGYLGSTHSQTETQVDSEDHFDDALESAIKAFQTYYHLKPTG 102

Query: 156 MVDSSTLEAMNVP 168
           ++D+ T   M+  
Sbjct: 103 ILDAPTATQMSRT 115


>gi|167757364|ref|ZP_02429491.1| hypothetical protein CLORAM_02914 [Clostridium ramosum DSM 1402]
 gi|167703539|gb|EDS18118.1| hypothetical protein CLORAM_02914 [Clostridium ramosum DSM 1402]
          Length = 248

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 9/138 (6%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
           +  +  S    + N S          +        + +  P  S+      +  +     
Sbjct: 114 DNGVQVSTCANVSNGSKSRKWTKHGKSPYIDYGTTVSTPAPEPSQP----VDDWLNRLNA 169

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
            ++R G+   P   +  G      + ++ERL   G    +  +   F    + A+ +FQ 
Sbjct: 170 EIARQGFSSYP--TVKKGAKGGITRLIQERLNSVGF---NLVVDGDFGKKTKEAIIVFQR 224

Query: 148 RHGLDPSGMVDSSTLEAM 165
             GL   G+V S+T + +
Sbjct: 225 NRGLVQDGVVGSNTWDWL 242


>gi|304404313|ref|ZP_07385975.1| spore cortex-lytic enzyme [Paenibacillus curdlanolyticus YK9]
 gi|304347291|gb|EFM13123.1| spore cortex-lytic enzyme [Paenibacillus curdlanolyticus YK9]
          Length = 261

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                 + +G+S   V  L+ RL   G        +  F     +AVK FQ + G+   G
Sbjct: 33  TFSSATIKMGSSGKDVYELQGRLKFLGFYSGKVDGN--FGTTTLNAVKWFQWKFGMTADG 90

Query: 156 MVDSS 160
           +V + 
Sbjct: 91  VVGAK 95


>gi|194015644|ref|ZP_03054260.1| N-acetylmuramoyl-L-alanine amidase XlyB (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
 gi|194013048|gb|EDW22614.1| N-acetylmuramoyl-L-alanine amidase XlyB (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
          Length = 267

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 16/123 (13%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-- 103
               D+F   +A    G  S    +  E+++   KA    Q   +      LP   L   
Sbjct: 144 GRW-DQFKAGIATARTGSKSTRKPVRTESLSH--KAPVTKQKSSN------LPSGILKIT 194

Query: 104 -LGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                   V  +++ L            + G+   + +   +AVK FQ+ +GL   G+  
Sbjct: 195 KPLTKGPQVIAVQKALSSLYFYPDKGAKNNGIDGYYGSKTANAVKRFQLMNGLAADGIYG 254

Query: 159 SST 161
             T
Sbjct: 255 PKT 257


>gi|119511006|ref|ZP_01630127.1| Peptidoglycan-binding domain 1 protein [Nodularia spumigena
           CCY9414]
 gi|119464351|gb|EAW45267.1| Peptidoglycan-binding domain 1 protein [Nodularia spumigena
           CCY9414]
          Length = 292

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 15/93 (16%)

Query: 76  AQTEKAIAF--YQDILSRG-GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
            +T  AI    YQ+    G G P +    L LG+   +V  ++  L +          + 
Sbjct: 209 PETRNAIFRNGYQNGYQSGTGGPVI----LGLGSRGSAVTEIQRALGVE--------PTG 256

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +       V+ FQ R+ L   G+V   T  A+
Sbjct: 257 YYGPTTTRVVREFQARNYLRVDGIVGPETRSAI 289



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 8/64 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+ S +V  ++  L +          +  +       V+ FQ R+ L   G+V   T
Sbjct: 160 LSLGSRSSAVTEVQRALGV--------QPTGYYGPTTTRVVRQFQARNNLRVDGIVGPET 211

Query: 162 LEAM 165
             A+
Sbjct: 212 RNAI 215


>gi|283770491|ref|ZP_06343383.1| ctpA serine protease [Staphylococcus aureus subsp. aureus H19]
 gi|283460638|gb|EFC07728.1| ctpA serine protease [Staphylococcus aureus subsp. aureus H19]
          Length = 496

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 SKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|282916688|ref|ZP_06324446.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           D139]
 gi|282319175|gb|EFB49527.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           D139]
          Length = 496

 Score = 50.6 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 SKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|325983405|ref|YP_004295807.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
 gi|325532924|gb|ADZ27645.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
          Length = 392

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 53/175 (30%), Gaps = 55/175 (31%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKV-----GLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
                + +++N+ A  L      K       +   V +GRV+ +TP   +RI     NP 
Sbjct: 122 PDAPRQGIVINLAAMRLFYFPQTKPGEPQRVITHPVGIGRVEWKTPEGMTRITAKNKNPS 181

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W+   SI +K+                                  ++           PG
Sbjct: 182 WIPTPSI-RKE----------------------------------HAKNGNPLPAIVPPG 206

Query: 304 KINAMA--STKIEFYSRNNTYMHDT---PEPILFNNVVRFETSGCVRVRNIIDLD 353
             N M     ++ +        H T   P   L     R  + GCVR+    D+ 
Sbjct: 207 PDNPMGAHVLRLAWP-SYAI--HGTDKPPSIGL-----RG-SHGCVRM-YPEDIA 251


>gi|257869674|ref|ZP_05649327.1| carboxyl-terminal protease [Enterococcus gallinarum EG2]
 gi|257803838|gb|EEV32660.1| carboxyl-terminal protease [Enterococcus gallinarum EG2]
          Length = 473

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G SS +V RL + L   G     +     FD    SAV+  Q +  L+ +G V++
Sbjct: 388 KELKEGQSSEAVDRLNQFLSALGY----RTTGDTFDQTTVSAVQAVQQKAELEVTGKVNA 443

Query: 160 STLEAMNVPVDLRIRQ 175
            T +A+   V  +++Q
Sbjct: 444 ETAQAIEKAVTDQLKQ 459


>gi|331082131|ref|ZP_08331259.1| hypothetical protein HMPREF0992_00183 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330405726|gb|EGG85256.1| hypothetical protein HMPREF0992_00183 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 163

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +PL +G+S   +++++E+L    +  P+     +   F    ++AVK FQ   GL  +
Sbjct: 79  PGQPLDIGSSGSKIRQIQEQLNAIANAYPALPKISVDGVFGENTQNAVKKFQQIFGLPAT 138

Query: 155 GMVDSSTLEAM 165
           G++D ST   +
Sbjct: 139 GIIDYSTWYEI 149


>gi|291485863|dbj|BAI86938.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 313

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             P+  G+    V+R+++ L            + G+   +     +AVK FQ  +GL   
Sbjct: 241 TNPMRKGD---DVRRIQKALAALYFYPDKGAKNNGIDGVYGPKTANAVKRFQSMYGLTQD 297

Query: 155 GMVDSSTLEAM 165
           G+  S T   +
Sbjct: 298 GIYGSKTKAKL 308


>gi|156742786|ref|YP_001432915.1| peptidoglycan binding domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156234114|gb|ABU58897.1| Peptidoglycan-binding domain 1 protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 554

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 1/66 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R +  G+    V   ++ L   G   P   +   F      A   FQ   GL P G++  
Sbjct: 156 RMISYGSQGPDVADAQQLLNQHGAAPPLA-VDGIFGPKTRQATIAFQKSRGLAPDGIIGP 214

Query: 160 STLEAM 165
            T  A+
Sbjct: 215 LTWGAL 220


>gi|296087731|emb|CBI34987.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA-------FDAYVESAVKLFQMRHGLDPSG 155
             G+    + ++++ L   G L  +   +         FD  +ESA+K FQ  + L P+G
Sbjct: 36  QKGDKVEGIHKVKKYLQHFGYLGSTHSQTETQVDSEDHFDDALESAIKAFQTYYHLKPTG 95

Query: 156 MVDSSTLEAMNVP 168
           ++D+ T   M+  
Sbjct: 96  ILDAPTATQMSRT 108


>gi|224584279|ref|YP_002638077.1| periplasmic protein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224468806|gb|ACN46636.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 321

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAHGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|226358218|ref|YP_002787957.1| peptidoglycan-binding domain 1 protein [Deinococcus deserti VCD115]
 gi|226319861|gb|ACO47855.1| putative peptidoglycan-binding domain 1 protein [Deinococcus
           deserti VCD115]
          Length = 241

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           I+    W +L I  +  G+S+ +V+ ++++L  +G    S  +   F +   SAV+ FQ 
Sbjct: 5   IVGGNTWEKL-IATVQQGDSNTAVRAVQDQL-RNGYGYGSVTIDGVFGSGTNSAVRDFQS 62

Query: 148 RHGLDPSGMVDSSTLEAM 165
           + GL   G+V  +T  ++
Sbjct: 63  KRGLGVDGVVGLNTWHSL 80


>gi|323339888|ref|ZP_08080157.1| carboxy-terminal processing protease CtpA [Lactobacillus ruminis
           ATCC 25644]
 gi|323092761|gb|EFZ35364.1| carboxy-terminal processing protease CtpA [Lactobacillus ruminis
           ATCC 25644]
          Length = 481

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L L +S  SV+ L++ L   G    +   +  F    + AV+ +Q  + L  +G  D+
Sbjct: 395 KELKLDDSGSSVESLQKMLNFLGY--DAGKENGYFSEKTQKAVEAYQKENKLTVNGKADT 452

Query: 160 STLEAMNVPVDLRIRQ 175
            TL  +   +  +I Q
Sbjct: 453 KTLTTLETQISQKINQ 468


>gi|319650801|ref|ZP_08004939.1| hypothetical protein HMPREF1013_01545 [Bacillus sp. 2_A_57_CT2]
 gi|317397499|gb|EFV78199.1| hypothetical protein HMPREF1013_01545 [Bacillus sp. 2_A_57_CT2]
          Length = 205

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+     L  G++   V  ++  L   G  +     +  +    E+AV+ FQ   GL   
Sbjct: 22  PKADAAVLKNGSAGPEVTYIQSALQKLGYFNTDN--TGYYGTVTENAVRNFQYDFGLAAD 79

Query: 155 GMVDSST 161
           G+V  +T
Sbjct: 80  GIVGVNT 86


>gi|220929205|ref|YP_002506114.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulolyticum H10]
 gi|219999533|gb|ACL76134.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulolyticum H10]
          Length = 236

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           R L  G+    V  ++ERL   G  +  +  S  ++  ++ A+  FQ  H L  
Sbjct: 167 RNLKPGDRGSDVLAVQERLKQLGYFNGYE--SGIYEDDLKEAIFQFQKDHNLKV 218


>gi|187934789|ref|YP_001887348.1| spore cortex-lytic enzyme, pre-pro-form [Clostridium botulinum B
           str. Eklund 17B]
 gi|187722942|gb|ACD24163.1| spore cortex-lytic enzyme, pre-pro-form [Clostridium botulinum B
           str. Eklund 17B]
          Length = 792

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 25/129 (19%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P  PL L + + +V+ ++++L         +      +  FD   E AVK+FQ    L  
Sbjct: 324 PGTPLRLNDENNNVKVIQKQLNRISQNFPAIPKIPYENGKFDKSTEDAVKVFQKVFNLTQ 383

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ--------KMGLRYVLVNIPAASL 205
            G+V  +T          RI  + V + R+ +L ++          G  Y     P   L
Sbjct: 384 DGIVGRATWY--------RISSIYVGVKRLAELDQEPEIDGENPPPGGEY-----PGYLL 430

Query: 206 EAVENGKVG 214
           +    G+  
Sbjct: 431 KYGSRGEKV 439



 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLII--SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L  G+    V+ ++  L +       PS      F    + AV  FQ   GL P G
Sbjct: 426 PGYLLKYGSRGEKVKEVQSYLSVISKSYNIPSIKADGIFGQMTKDAVIAFQRLFGLAPDG 485

Query: 156 MVDSSTLE 163
           ++  +T  
Sbjct: 486 IIGINTWN 493



 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSV---QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L LG+    V   Q+    L  +  L      +  FD   E A+K  Q + GL  +
Sbjct: 704 PGFDLELGDRDGYVTVFQKYINVLAKNNYLSNQIIENGVFDKRTEKAIKELQEKFGLKVT 763

Query: 155 GMVDSSTL 162
           G+VD  T 
Sbjct: 764 GIVDKLTW 771



 Score = 40.2 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 10/89 (11%)

Query: 85  YQDILSRGGWPEL--------PIRPLHLGNSSVSVQRLRERLII--SGDLDPSKGLSVAF 134
           Y+D++   G  +L        P   L  G+    V+ ++  L +       PS      F
Sbjct: 499 YKDLIKGTGQQDLNEDFDGKYPGYLLSYGSRGEKVREMQTYLSVISKSYNIPSINADGIF 558

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
                +AV  FQ   GL   G+V  +T  
Sbjct: 559 GEMTRNAVLSFQRLFGLAQDGVVGLNTWN 587


>gi|34496770|ref|NP_900985.1| hypothetical protein CV_1315 [Chromobacterium violaceum ATCC 12472]
 gi|34102625|gb|AAQ58990.1| probable phage-related protein [Chromobacterium violaceum ATCC
           12472]
          Length = 264

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 6/93 (6%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ L+ G+    V+ L+ RL   G       +   + +  E AV   Q R GL  SG+  
Sbjct: 1   MQALNKGSCGQEVRELQTRLNCQG---ARLLVDGWYGSATEQAVAKLQRRAGLVVSGVAG 57

Query: 159 SSTLEAMNVPVDLRI---RQLQVNLMRIKKLLE 188
           S+TL A+    D R      L      ++  L 
Sbjct: 58  SATLAALRGQRDPRRLGETDLIAAAESLRLPLP 90


>gi|72537711|ref|YP_293741.1| gp28-like protein [Burkholderia phage phi52237]
 gi|254188181|ref|ZP_04894693.1| putative peptidoglycan binding domain [Burkholderia pseudomallei
           Pasteur 52237]
 gi|72398401|gb|AAZ72636.1| gp28-like protein [Burkholderia phage phi52237]
 gi|157935861|gb|EDO91531.1| putative peptidoglycan binding domain [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 270

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+     
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKM 60

Query: 162 LEAM 165
              +
Sbjct: 61  YRVL 64


>gi|260583839|ref|ZP_05851587.1| carboxyl protease [Granulicatella elegans ATCC 700633]
 gi|260158465|gb|EEW93533.1| carboxyl protease [Granulicatella elegans ATCC 700633]
          Length = 485

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G  S +V  +   L   G    S      FD   + AVK +Q + GL  +G VD  
Sbjct: 401 TLKVGTVSQNVLSVETILKGLGY---SVTADGYFDEATKEAVKAYQQKEGLTATGEVDEE 457

Query: 161 TLEAMNVPVDLRIRQ 175
           T + +   V   I+Q
Sbjct: 458 TAQKLMNSVRELIQQ 472


>gi|307152104|ref|YP_003887488.1| hypothetical protein Cyan7822_2234 [Cyanothece sp. PCC 7822]
 gi|306982332|gb|ADN14213.1| protein of unknown function DUF187 [Cyanothece sp. PCC 7822]
          Length = 423

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     VQ ++  L   G        +  F    ++AV  FQ  +GL   G+V   T   
Sbjct: 359 GMRGDDVQEIQRLLQNRGFYRGKLNGNFGF--RTKAAVTAFQKANGLKNDGIVGPLTYRQ 416

Query: 165 M 165
           +
Sbjct: 417 L 417


>gi|320086345|emb|CBY96118.1| Uncharacterized protein ycfS Flags: Precursor [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 321

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 56/170 (32%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I                                 + +D  +  P      
Sbjct: 151 ANPTWTPTATI-----------------RARYK----------AQGIDLPAVVP------ 177

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 178 --AGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|17232476|ref|NP_489024.1| hypothetical protein alr4984 [Nostoc sp. PCC 7120]
 gi|17134122|dbj|BAB76683.1| alr4984 [Nostoc sp. PCC 7120]
          Length = 203

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  GNS ++V+ L+  L+  G      G    F A  E+AVK FQ++  L   G+V  +
Sbjct: 140 TLRFGNSGLAVRALQRLLVAKGYAIRVDGN---FGALTETAVKAFQIQRNLSVDGVVGFN 196

Query: 161 TLEAM 165
           T  ++
Sbjct: 197 TWYSL 201


>gi|304317987|ref|YP_003853132.1| carboxyl-terminal protease [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779489|gb|ADL70048.1| carboxyl-terminal protease [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 455

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +  + +  G++   V+ L+  L + G        +  F      A+  FQ   G+  +G+
Sbjct: 366 VYTKDIKKGDTGNDVKLLQSYLSLLGYYKGEP--NGYFGNDTYDAIVSFQKYAGIPATGV 423

Query: 157 VDSSTLEAM 165
           +D  T +A+
Sbjct: 424 LDRGTTDAL 432


>gi|194363931|ref|YP_002026541.1| peptidoglycan-binding domain 1 protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194346735|gb|ACF49858.1| Peptidoglycan-binding domain 1 protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 665

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 7/84 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              G  S  V++++E+L   G +            F    ++AV+  Q  +GL   G+V 
Sbjct: 466 YKQGAHSEGVRKVQEQLGHLGYVGADGKPLVEDGRFGRNTDAAVRQLQKDNGLVVDGIVG 525

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMR 182
           + TLEA+    D R R L +N  R
Sbjct: 526 AKTLEAI---KDARERPL-LNDER 545


>gi|256752829|ref|ZP_05493670.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256748279|gb|EEU61342.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 110

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V+ L++ L  +G    +   +  F    ++AV   Q  + L P G+    T
Sbjct: 29  LKYGMRSPEVRHLQQNLNKAGYFVTANP-TDYFGPATKNAVMRLQKDYNLVPDGIYGPLT 87

Query: 162 LEAM 165
            +A+
Sbjct: 88  EKAL 91


>gi|153868973|ref|ZP_01998687.1| Peptidoglycan-binding domain 1 [Beggiatoa sp. PS]
 gi|152074467|gb|EDN71319.1| Peptidoglycan-binding domain 1 [Beggiatoa sp. PS]
          Length = 281

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDS 159
            L LG+    V +L+E+L           ++  +D   + AV+ +Q  + GL  +G+ D 
Sbjct: 67  TLKLGDQGALVAKLQEKLTERKYY--QGKITGFYDENTQKAVRQYQTEYFGLPATGIADP 124

Query: 160 ST 161
            T
Sbjct: 125 LT 126


>gi|119493546|ref|ZP_01624211.1| hypothetical protein L8106_25882 [Lyngbya sp. PCC 8106]
 gi|119452600|gb|EAW33782.1| hypothetical protein L8106_25882 [Lyngbya sp. PCC 8106]
          Length = 196

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           ++ +  L+ G+   +V+ L+ RL  +G      G    F       VK FQ R GL   G
Sbjct: 128 DVNMPELYQGSVGDAVECLQLRLYDNGFFLFIDG---IFGPKTLEVVKAFQRREGLKVDG 184

Query: 156 MVDSSTLEAM 165
           +V   T   +
Sbjct: 185 IVGVQTWRKL 194



 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 49/113 (43%), Gaps = 13/113 (11%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQR 113
           + +  ++    S +   +    A  + A    + I       +LP+  L LG +  +V+ 
Sbjct: 2   SAMTNIETNGKSTVSTATIPASASVQSAAVQSRGI-------DLPL--LKLGAAGEAVRF 52

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEAM 165
            ++R I +G      G +  +   +++AV+ FQ  + GL   G++  +T   +
Sbjct: 53  AQQRFIANGY---RIGFNGQYGPQMKAAVEHFQRNYGGLVVDGIIGENTWRVL 102


>gi|117919296|ref|YP_868488.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. ANA-3]
 gi|117611628|gb|ABK47082.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. ANA-3]
          Length = 304

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 48/160 (30%), Gaps = 52/160 (32%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSI--- 250
           +++N+    L     GK  +    + +G++ + TP    + + R   NP W     I   
Sbjct: 98  IVINVAEMRLYYYPKGKNTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRIRKE 157

Query: 251 --IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
              + +++  +                            W              G  N M
Sbjct: 158 YAARGEILPAV----------------------------W------------PAGPDNPM 177

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               +   +      H T     F   +R  + GCVR+R+
Sbjct: 178 GLYALYIGNLYAI--HGTNAS--FGIGLR-VSQGCVRLRH 212


>gi|224092308|ref|XP_002309552.1| predicted protein [Populus trichocarpa]
 gi|222855528|gb|EEE93075.1| predicted protein [Populus trichocarpa]
          Length = 243

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP-----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             G+    V +L++ L   G L+       +     FD  +E A+K +Q+   L P+G++
Sbjct: 48  KKGDKVEGVDQLKKLLHHFGYLNHGGLNNDEVDDDYFDETIERALKTYQINFNLKPTGVL 107

Query: 158 DSSTLEAM 165
           D+ T+  M
Sbjct: 108 DAETVSLM 115


>gi|24375244|ref|NP_719287.1| LysM domain-containing protein [Shewanella oneidensis MR-1]
 gi|24350038|gb|AAN56731.1|AE015808_7 LysM domain protein [Shewanella oneidensis MR-1]
          Length = 304

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 48/160 (30%), Gaps = 52/160 (32%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSI--- 250
           +++N+    L     GK  +    + +G++ + TP    + + R   NP W     I   
Sbjct: 98  IVINVAEMRLYYYPKGKKTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRIRKE 157

Query: 251 --IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
              + +++  +                            W              G  N M
Sbjct: 158 YAARGEILPAV----------------------------W------------PAGPDNPM 177

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               +   +      H T     F   +R  + GCVR+R+
Sbjct: 178 GLYALYIGNLYAI--HGTNAS--FGIGLR-VSQGCVRLRH 212


>gi|114046387|ref|YP_736937.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. MR-7]
 gi|113887829|gb|ABI41880.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. MR-7]
          Length = 304

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 48/160 (30%), Gaps = 52/160 (32%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSI--- 250
           +++N+    L     GK  +    + +G++ + TP    + + R   NP W     I   
Sbjct: 98  IVINVAEMRLYYYPKGKNTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRIRKE 157

Query: 251 --IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
              + +++  +                            W              G  N M
Sbjct: 158 YAARGEILPAV----------------------------W------------PAGPDNPM 177

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               +   +      H T     F   +R  + GCVR+R+
Sbjct: 178 GLYALYIGNLYAI--HGTNAS--FGIGLR-VSQGCVRLRH 212


>gi|119484926|ref|ZP_01619408.1| hypothetical protein L8106_15675 [Lyngbya sp. PCC 8106]
 gi|119457744|gb|EAW38868.1| hypothetical protein L8106_15675 [Lyngbya sp. PCC 8106]
          Length = 135

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL------HLGNS 107
            F  +  + +D    I+  +TI    +A               +PIR L        G+ 
Sbjct: 31  EFQKKSGLTVDG---IVGPKTINILSQA-------------TSVPIRTLNSLPILRQGSK 74

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              V +++  L        +  +   F    E+A+K FQ   GL   G+V   T  A+
Sbjct: 75  GEDVIQIQNNLN--NYSGENLVVDGVFGNATEAAIKKFQAEKGLVVDGIVGRLTWNAL 130



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           ++ +L I G           F A  E+AVK FQ + GL   G+V   T+  ++    + I
Sbjct: 4   IQAQLNIFG---AKLVEDGIFGATTEAAVKEFQKKSGLTVDGIVGPKTINILSQATSVPI 60

Query: 174 RQL 176
           R L
Sbjct: 61  RTL 63


>gi|218441711|ref|YP_002380040.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7424]
 gi|218174439|gb|ACK73172.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7424]
          Length = 217

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 39/154 (25%), Gaps = 52/154 (33%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +   +  +      V VG+   +TP     + +++ NP W  P                
Sbjct: 101 RVYVYQGDQEIGNYPVAVGKKGWETPTGDFAVMQMIVNPSWQNPW--------------- 145

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--TKIEFYSRNNT 321
                         G+ V                     G  N +           +N  
Sbjct: 146 -------------NGRIV-------------------PAGPKNPLGERWIGFWTDGKNFI 173

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
             H T    L        + GCVR+RN     ++
Sbjct: 174 GFHGTAAEHLIGQ---AVSHGCVRMRNSDIKALY 204


>gi|281357197|ref|ZP_06243686.1| Peptidoglycan-binding domain 1 protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281316228|gb|EFB00253.1| Peptidoglycan-binding domain 1 protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 308

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 95  PELPIRP-------LHLGNSSVSVQRLRERLIISGDL--DPSKGLSVAFDAYVESAVKLF 145
           P +P +        +  G S   V  L   L++   L  D   G  V +D  +E +VK F
Sbjct: 117 PVVPAKTYEYGERTIRSGMSGSDVATLATFLVLHKYLTMDVKPGKRVFYDWRIEESVKKF 176

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q    L  +G+ D+ T + +
Sbjct: 177 QRDANLPETGICDAQTAKKL 196



 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 15/92 (16%)

Query: 79  EKAIAFYQD-ILSRGGWPELPIRPLHLGNSSVSV----------QRLRERLIISGDLDPS 127
           ++ +A YQ+ I      P +P +   LG   + +            L +RL +    +  
Sbjct: 209 KERLAGYQEKITPITPIPVIPSKTFKLGMRDLRIGCTGEDVTDFISLLQRLNLLDYSESM 268

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                 FD  VE+AVK +Q + G   +G+ D 
Sbjct: 269 D----FFDTKVEAAVKKYQKQTGRTETGVADK 296


>gi|314933610|ref|ZP_07840975.1| carboxyl- protease [Staphylococcus caprae C87]
 gi|313653760|gb|EFS17517.1| carboxyl- protease [Staphylococcus caprae C87]
          Length = 492

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  HLG+ + +V+ ++  L   G        S  FD+ +ES +K FQ  + L+ +G  D 
Sbjct: 406 KTYHLGDENKNVKTMKIGLTALGY--KVNNESNQFDSELESTIKSFQKDNHLEVTGKFDK 463

Query: 160 ST 161
            T
Sbjct: 464 KT 465


>gi|291533713|emb|CBL06826.1| Cell wall-associated hydrolases (invasion-associated proteins)
           [Megamonas hypermegale ART12/1]
          Length = 251

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L L +    V  L++ LI          +S  +D   + AVK FQ  H +  +G+V+  T
Sbjct: 32  LKLNSHGHDVIVLQQNLIRMNY--DLSKVSGNYDKETQEAVKAFQKDHKIKVTGIVNRET 89

Query: 162 LEAM 165
             A+
Sbjct: 90  WWAI 93


>gi|126175624|ref|YP_001051773.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS155]
 gi|152999445|ref|YP_001365126.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS185]
 gi|217972124|ref|YP_002356875.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
 gi|304411043|ref|ZP_07392659.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
 gi|307301834|ref|ZP_07581592.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
 gi|125998829|gb|ABN62904.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS155]
 gi|151364063|gb|ABS07063.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS185]
 gi|217497259|gb|ACK45452.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
 gi|304350578|gb|EFM14980.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
 gi|306913872|gb|EFN44293.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
          Length = 304

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 55/175 (31%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     GK  +    + +G++ + TP    + + R   NP W     I +K
Sbjct: 98  IVINVAEMRLYYYPKGKKTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRI-RK 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +  A                         +    W              G  N M    +
Sbjct: 157 EYAAKG----------------------EILPAVW------------PAGPDNPMGLYAL 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              +      H T     F   +R  + GCVR+R+  +    L K+ P  +R   
Sbjct: 183 YIGNLYAI--HGTNAS--FGIGLR-VSQGCVRLRH--EDIEHLFKNVPVGTRVQF 230


>gi|24372876|ref|NP_716918.1| general secretion pathway protein a [Shewanella oneidensis MR-1]
 gi|24346991|gb|AAN54363.1|AE015573_10 general secretion pathway protein a [Shewanella oneidensis MR-1]
          Length = 554

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P LP+  +   +S   +Q L   L               FD  +E+ +K FQ +HGL   
Sbjct: 468 PNLPMMEISQKSSPGQLQWLENALAHV--AKRPSRRVSQFDLKLENDLKAFQSQHGLKAD 525

Query: 155 GMVDSSTLEAMN 166
           G+  + TL  +N
Sbjct: 526 GIAGNQTLVRLN 537


>gi|117923807|ref|YP_864424.1| ErfK/YbiS/YcfS/YnhG family protein [Magnetococcus sp. MC-1]
 gi|117607563|gb|ABK43018.1| ErfK/YbiS/YcfS/YnhG family protein [Magnetococcus sp. MC-1]
          Length = 362

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 46/158 (29%), Gaps = 57/158 (36%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +++N+P   L             V +GR    TPI  ++I R    P W +P SI +++ 
Sbjct: 135 LVINLPEMRLYHRRADGRLETFPVGIGREGFDTPISRAKIIRKKSAPSWYVPASI-REE- 192

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                 P       PG  N +       
Sbjct: 193 -------------------------------------NPKLPAVIPPGASNPLG------ 209

Query: 316 YSRNNTY-------MHDTPEPILFNNVVRFETSGCVRV 346
              +  Y       +H T +P      V   + GC+R+
Sbjct: 210 --SHAIYLSLPGYLIHGTNKPYGIGRRV---SHGCIRM 242


>gi|113971426|ref|YP_735219.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. MR-4]
 gi|113886110|gb|ABI40162.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. MR-4]
          Length = 304

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 48/160 (30%), Gaps = 52/160 (32%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSI--- 250
           +++N+    L     GK  +    + +G++ + TP    + + R   NP W     I   
Sbjct: 98  IVINVAEMRLYYYPKGKNTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRIRKE 157

Query: 251 --IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
              + +++  +                            W              G  N M
Sbjct: 158 YAARGEILPAV----------------------------W------------PAGPDNPM 177

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               +   +      H T     F   +R  + GCVR+R+
Sbjct: 178 GLYALYIGNLYAI--HGTNAS--FGIGLR-VSQGCVRLRH 212


>gi|120597701|ref|YP_962275.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. W3-18-1]
 gi|146294162|ref|YP_001184586.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens CN-32]
 gi|120557794|gb|ABM23721.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. W3-18-1]
 gi|145565852|gb|ABP76787.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens CN-32]
 gi|319427505|gb|ADV55579.1| L,D-transpeptidase, YbiS [Shewanella putrefaciens 200]
          Length = 304

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 42/155 (27%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     GK  +    + +G++ + TP    + + R   NP W     I +K
Sbjct: 98  IVINVAEMRLYYYPKGKKTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRI-RK 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +  A                         +    W              G  N M    +
Sbjct: 157 EYAAKG----------------------EILPAVW------------PAGPDNPMGLYAL 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +      H T     F   +R  + GCVR+R+
Sbjct: 183 YIGNLYAI--HGTNAS--FGIGLR-VSQGCVRLRH 212


>gi|326442995|ref|ZP_08217729.1| hypothetical protein SclaA2_18108 [Streptomyces clavuligerus ATCC
           27064]
          Length = 326

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 19/183 (10%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQD----ILSRGGWPELPIRPLHLGNSSVSVQRL 114
            D       P   +   A+T++A          I + G    +  R    G     V+ L
Sbjct: 71  ADAQRTRTTPKEQQAQKARTQRAPERPARSTDTIPAAGQATVVMSR----GAQGPRVREL 126

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRI 173
           + RL   G    +   +  +      AV+ FQ + GL  +G+ D++T   +  +      
Sbjct: 127 QARLAQIGWFGSAP--TGFYGRLTADAVRGFQGKRGLSVTGLTDTTTWRKLRGMTTAPTA 184

Query: 174 RQLQ-------VNLMRIK-KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
            +L            + + +L  + +  R + ++    SL  V +G V     V  G   
Sbjct: 185 EELSGTRKDPVKAAHKPRPRLDPRCLNGRVLCISKTTRSLSWVVDGTVRSTMDVRFGAEY 244

Query: 226 RQT 228
             T
Sbjct: 245 TPT 247


>gi|242092574|ref|XP_002436777.1| hypothetical protein SORBIDRAFT_10g008650 [Sorghum bicolor]
 gi|241915000|gb|EER88144.1| hypothetical protein SORBIDRAFT_10g008650 [Sorghum bicolor]
          Length = 370

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           H G     + ++++ L   G L  S  G +  FDA +E A+K++Q   GLD +G +D+ST
Sbjct: 57  HFGEQQQGLAKVKDYLSHFGYLPESSSGFNDLFDADLEEAIKVYQRNFGLDVTGAMDAST 116

Query: 162 LEAM 165
           +  M
Sbjct: 117 VAQM 120


>gi|296221444|ref|XP_002756745.1| PREDICTED: matrix metalloproteinase-21 [Callithrix jacchus]
          Length = 571

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 31/129 (24%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA---IAFYQDILSRGGWPELPI 99
              +    + ++     D       P+   + IA    A   ++ Y    ++  W   P 
Sbjct: 15  WLAAPGPTQPESLFHSRDHSDLEPSPLRQAQPIADLHAAQRFLSRYGWSGAQAAWGPSPE 74

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            P                        P      +    +  AV+ FQ  + L  SG +D+
Sbjct: 75  GP------------------------PETPKGTS----LAQAVRRFQRANALPASGELDA 106

Query: 160 STLEAMNVP 168
           +TL AMN P
Sbjct: 107 ATLAAMNQP 115


>gi|146311422|ref|YP_001176496.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter sp. 638]
 gi|145318298|gb|ABP60445.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter sp. 638]
          Length = 337

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     G+ +     + +G++  +TP+  +R+++ + NP W
Sbjct: 89  MLLPDTPREGIVVNLAELRLYYFPPGENIVQVYPLGIGQLGLETPVSTTRVSQKIPNPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I  + +   ++                                          G 
Sbjct: 149 TPTAGIRARSLAQGIK-----------------------------------LPPVVPAGP 173

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     +  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 174 NNPLGRFALRLGIGHGEYLIHGTSAP---DSVGLRVSSGCMRMNAPDIKALF 222


>gi|315658324|ref|ZP_07911196.1| carboxy-terminal processing protease CtpA [Staphylococcus
           lugdunensis M23590]
 gi|315496653|gb|EFU84976.1| carboxy-terminal processing protease CtpA [Staphylococcus
           lugdunensis M23590]
          Length = 483

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             H G+++  V+ ++  L   G        S  FD  +E A+K FQ  + L  +G  D  
Sbjct: 398 SYHKGDNNKHVKAMKIGLTALGY--KVDNESKDFDDNLEQAIKAFQQDNNLTVNGQFDKE 455

Query: 161 T 161
           T
Sbjct: 456 T 456


>gi|297617789|ref|YP_003702948.1| peptidoglycan-binding lysin domain protein [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145626|gb|ADI02383.1| Peptidoglycan-binding lysin domain protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 381

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V +L++ L   G    +KG+   F     SAV  FQ  + L   G+V   T +A+
Sbjct: 111 VSQLQKDLTFVGF--DTKGVDGCFGPATVSAVLSFQTANKLKADGIVGPETKKAL 163



 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG     V+++++ L        + G+   +     SAV  FQ    L   G+   
Sbjct: 44  KDLALGTYGEDVRQVQQCLSHLNY--NTGGIDGIYGPQTVSAVSAFQKDQQLVVDGIAGP 101

Query: 160 STLEAM 165
            T  A+
Sbjct: 102 ETQWAL 107


>gi|289550827|ref|YP_003471731.1| Probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus lugdunensis HKU09-01]
 gi|289180359|gb|ADC87604.1| Probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus lugdunensis HKU09-01]
          Length = 483

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             H G+++  V+ ++  L   G        S  FD  +E A+K FQ  + L  +G  D  
Sbjct: 398 SYHKGDNNKHVKAMKIGLTALGY--KVDNESKDFDDNLEQAIKAFQQDNNLTVNGQFDKE 455

Query: 161 T 161
           T
Sbjct: 456 T 456


>gi|304315730|ref|YP_003850875.1| spore cortex-lytic enzyme [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777232|gb|ADL67791.1| spore cortex-lytic enzyme [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 238

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GNS   V R++ RL   G  D    +   F      AV+ FQ  +GL+ +G+VD  T  A
Sbjct: 42  GNSGSDVSRVQSRLKDWGYYDG--PVDGFFGVRTWLAVRKFQANNGLNVTGIVDDETKVA 99

Query: 165 M--NVPVDL 171
           +  N     
Sbjct: 100 LGFNTSTSA 108


>gi|328952431|ref|YP_004369765.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
           11109]
 gi|328452755|gb|AEB08584.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
           11109]
          Length = 314

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 49/163 (30%), Gaps = 48/163 (29%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            +        ++VN     L    +     +   + +G +D +TP    ++     NP W
Sbjct: 97  WIVPDHPEHPIIVNTGEMRLYFFTDNFTKVITYPIGMGVLDFKTPTGVFKVTEKKTNPPW 156

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P+++                    + +++                           G 
Sbjct: 157 FVPKTLQ---------------AKYGMSVMES--------------------------GP 175

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
            N +   K+        Y +H T +P  F  V R  + GC R+
Sbjct: 176 DNPLGKYKLTL--SWGDYGIHGTSQP--FG-VGRLVSHGCTRM 213


>gi|308069349|ref|YP_003870954.1| peptidoglycan-binding domain-containing protein [Paenibacillus
           polymyxa E681]
 gi|305858628|gb|ADM70416.1| Putative peptidoglycan-binding domain-containing protein
           [Paenibacillus polymyxa E681]
          Length = 163

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
            G+P      L  G+S   V+ L+  L   G       +  +F + V++ ++ FQ   GL
Sbjct: 38  NGFPT-----LRQGDSGGYVRALQANLWAYGQQGDVGKIDGSFGSGVKTGLQNFQRNKGL 92

Query: 152 DPSGMVDSSTLEAM--NVPVDL 171
              G+  S T   M  NV +++
Sbjct: 93  SADGIAGSGTWNRMTYNVSIEV 114


>gi|291545276|emb|CBL18385.1| Putative peptidoglycan-binding domain-containing protein
           [Ruminococcus sp. 18P13]
          Length = 463

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P  P RPL  G+SS  V+ ++ RL         +         F     +AV+ FQ    
Sbjct: 175 PSYPERPLQEGDSSDDVRAIQIRLRRIAQNYPAIPVIPDTDGVFGTPTAAAVEEFQRIFS 234

Query: 151 LDPSGMVDSSTLE 163
           L  +G+VD ST  
Sbjct: 235 LPATGVVDQSTWY 247



 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G  S+ V+ ++  L + G          ++  +     ++V+ FQ   GL  +G+++
Sbjct: 280 LRPGMESMQVKLVQYYLAVVGAYYEQVQPVEITGYYGDQTAASVRSFQQVFGLPQTGIIN 339

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 340 RATWNQL 346



 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIIS-GDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G +S +V+  +E L    G     P+   +  F     SAV  FQ   GL+ +
Sbjct: 369 PGTVLKEGTTSEAVRIAQEYLNFLHGVYPQIPAVNNTGYFGPVTRSAVLAFQRLMGLEEN 428

Query: 155 GMVDSSTLEAM 165
           G++   T + +
Sbjct: 429 GLIGPITWDEL 439


>gi|82751011|ref|YP_416752.1| carboxy-terminal processing proteinase [Staphylococcus aureus
           RF122]
 gi|94708711|sp|Q2YXZ9|CTPAL_STAAB RecName: Full=Probable CtpA-like serine protease
 gi|82656542|emb|CAI80964.1| carboxy-terminal processing proteinase [Staphylococcus aureus
           RF122]
          Length = 496

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQTNKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|282899460|ref|ZP_06307426.1| hypothetical protein CRC_00907 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195617|gb|EFA70548.1| hypothetical protein CRC_00907 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 313

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +    E+A+K FQ ++GL   G++  +T   +
Sbjct: 279 IYGRQTEAAIKRFQQQNGLTADGIIGPATWGKL 311



 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 92  GGWPELPIRPLH--LGNSSVSVQRLRERLIISG--DLDPSKGLSVAFD-AYVESAVKLFQ 146
           G  P  P++P+    G+   S+ RL++ L      D +        F      SAV+ FQ
Sbjct: 168 GKLPTAPVKPVEDVTGDKDTSILRLQKALNQLKITDRNNRPLTEDNFTGPATSSAVEKFQ 227

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
              G+ P+GM   +T +A+N  +  R  Q
Sbjct: 228 RVVGIIPTGMATQTTWDAINQILAKRTVQ 256


>gi|238895185|ref|YP_002919920.1| putative ATP synthase subunit [Klebsiella pneumoniae NTUH-K2044]
 gi|238547502|dbj|BAH63853.1| putative ATP synthase subunit [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 328

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 52/164 (31%), Gaps = 40/164 (24%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +    ++VN+    L     G+       + +G++  +TP + +R+ + + NP W
Sbjct: 89  MLLPDVPREGIVVNLAELRLYYFPPGENQVQVYPLGIGQLGLETPEMTTRVGQKIPNPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I  + +                                    +          G 
Sbjct: 149 TPTAGIRARSL-----------------------------------EKGVTLPAVVPAGP 173

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
            N +    +     N  Y +H T  P   ++V    +SGC+R+ 
Sbjct: 174 NNPLGRYALRLAYGNGEYLIHGTNAP---DSVGLRVSSGCMRMN 214


>gi|227114591|ref|ZP_03828247.1| hypothetical protein PcarbP_16598 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 303

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 60/200 (30%), Gaps = 53/200 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPILHSRINRIMFN---PYWVIPRSII 251
           +++N+    L     G   +    + +G+  R TP   + +  + +    P W       
Sbjct: 98  IVINVAEMRLYYYPKGSNTVEVLPIGIGQAGRDTP--TNWVTSVKYKKEGPTWT------ 149

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
                        Y +                          P F      G  N M   
Sbjct: 150 -----PTAATHRDYARR---------------------GESLPAFF---PAGPENPMGLY 180

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-----Y 366
            I   +      H T     F   +R  + GCVR+RN  D   +L ++ P  +R      
Sbjct: 181 AIYIGNLYAI--HGTNAN--FGIGLR-ISQGCVRLRN--DDIKYLFENVPNGTRVQFINE 233

Query: 367 HIEEVVKTRKTTPVKLATEV 386
            I+  ++   T  +++   +
Sbjct: 234 PIKVSLEPDGTHWIEVHEPL 253


>gi|152970684|ref|YP_001335793.1| putative ATP synthase subunit [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|262044179|ref|ZP_06017251.1| ErfK/srfK family protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330012607|ref|ZP_08307442.1| protein ErfK/srfK [Klebsiella sp. MS 92-3]
 gi|150955533|gb|ABR77563.1| putative ATP synthase subunit [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|259038476|gb|EEW39675.1| ErfK/srfK family protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328533766|gb|EGF60455.1| protein ErfK/srfK [Klebsiella sp. MS 92-3]
          Length = 328

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 52/164 (31%), Gaps = 40/164 (24%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +    ++VN+    L     G+       + +G++  +TP + +R+ + + NP W
Sbjct: 89  MLLPDVPREGIVVNLAELRLYYFPPGENQVQVYPLGIGQLGLETPEMTTRVGQKIPNPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I  + +                                    +          G 
Sbjct: 149 TPTAGIRARSL-----------------------------------EKGVTLPAVVPAGP 173

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
            N +    +     N  Y +H T  P   ++V    +SGC+R+ 
Sbjct: 174 NNPLGRYALRLAYGNGEYLIHGTNAP---DSVGLRVSSGCMRMN 214


>gi|160874063|ref|YP_001553379.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS195]
 gi|160859585|gb|ABX48119.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS195]
 gi|315266295|gb|ADT93148.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS678]
          Length = 304

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 42/155 (27%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     GK  +    + +G++ + TP    + + R   NP W     I +K
Sbjct: 98  IVINVAEMRLYYYPKGKKTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRI-RK 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +  A                         +    W              G  N M    +
Sbjct: 157 EYAAKG----------------------EILPAVW------------PAGPDNPMGLYAL 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +      H T     F   +R  + GCVR+R+
Sbjct: 183 YIGNLYAI--HGTNAS--FGIGLR-VSQGCVRLRH 212


>gi|78221508|ref|YP_383255.1| hypothetical protein Gmet_0285 [Geobacter metallireducens GS-15]
 gi|78192763|gb|ABB30530.1| hypothetical protein Gmet_0285 [Geobacter metallireducens GS-15]
          Length = 292

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V +L++ L   G    +      F    E+A++ FQ + GL  +G+V    
Sbjct: 229 LQKGDRGPKVVQLQKALKSRGY---NLKSDGVFGKKTETALQDFQRKQGLPDNGIVGPKA 285

Query: 162 LEAM 165
              +
Sbjct: 286 AAYL 289


>gi|269795813|ref|YP_003315268.1| membrane-fusion protein [Sanguibacter keddieii DSM 10542]
 gi|269097998|gb|ACZ22434.1| membrane-fusion protein [Sanguibacter keddieii DSM 10542]
          Length = 379

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 94  WPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           + ELP  R L +G+    V +L+E L   G           +      AV  +Q   GL 
Sbjct: 127 FGELPAYRELGVGDRGADVSQLKENLTALGY--TGFSADDRYTQATSRAVSRWQKDVGLP 184

Query: 153 PSGMVDSS 160
            +G +   
Sbjct: 185 QTGRLGPE 192


>gi|297617690|ref|YP_003702849.1| peptidoglycan-binding protein [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145527|gb|ADI02284.1| Peptidoglycan-binding domain 1 protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 246

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISG---DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            R L  G+    V  L+ RL        +         F    E+AVKLFQ   G+   G
Sbjct: 100 SRTLRRGSRHTDVWILQNRLNAKAKKYAVALGGPADGNFGPKTETAVKLFQGDSGISVDG 159

Query: 156 MVDSSTLEAM 165
           +V   T + +
Sbjct: 160 VVGPVTFDQL 169



 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G + + V  L+++L+              F    E+AV  FQ   G+   G+   
Sbjct: 178 RNLQKGRNGIDVFALQKKLVALSY--NPGPCDGKFGPKTEAAVIKFQKDAGIAADGIAGP 235

Query: 160 STLEAMNV 167
            T  ++ +
Sbjct: 236 QTYYSLGI 243


>gi|126729498|ref|ZP_01745311.1| spore cortex-lytic enzyme precursor [Sagittula stellata E-37]
 gi|126709617|gb|EBA08670.1| spore cortex-lytic enzyme precursor [Sagittula stellata E-37]
          Length = 335

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 2/76 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L+E L         +     FD    +A+  FQ  +GL    +    T
Sbjct: 175 LRFGDQGADVRVLQEDLAGLRYFAGRRDG--RFDTLTRAALLAFQADNGLATDAVAGQQT 232

Query: 162 LEAMNVPVDLRIRQLQ 177
             A+       +R + 
Sbjct: 233 WAALARAQPRPLRDIA 248


>gi|194289051|ref|YP_002004958.1| lytic protein [Cupriavidus taiwanensis LMG 19424]
 gi|193222886|emb|CAQ68891.1| putative lytic enzyme, similar to phage phiCTX_orf11 [Cupriavidus
           taiwanensis LMG 19424]
          Length = 268

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 3/90 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+    V+ L+  L   G       ++  FDA   +AV+  Q R+GL   G+    T
Sbjct: 4   LRLGDVGADVRELQRLLRERG---AQLEMTGDFDAATLAAVRAAQARYGLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
           L A+             +L R   +LE  +
Sbjct: 61  LLALQRDTRQPAHLSAADLQRAADVLEVPL 90


>gi|309389082|gb|ADO76962.1| Peptidase M23 [Halanaerobium praevalens DSM 2228]
          Length = 434

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 3/70 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    + L +    V   ++ L I G       +   F    E A K FQ  + L   G
Sbjct: 23  SVSAFQVKLNDRGKEVIEAQKHLEILGY---EVAIDGIFGKSTEDAAKKFQAENNLQVDG 79

Query: 156 MVDSSTLEAM 165
           ++   TL  +
Sbjct: 80  IIGGKTLSLL 89


>gi|320334702|ref|YP_004171413.1| peptidoglycan-binding domain 1 protein [Deinococcus maricopensis
           DSM 21211]
 gi|319755991|gb|ADV67748.1| Peptidoglycan-binding domain 1 protein [Deinococcus maricopensis
           DSM 21211]
          Length = 258

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
              +   ++ L+ RL+    +D  KG    +    E+ +  FQ  +GL  +G+VD++T  
Sbjct: 173 PRMNGEDIRALQNRLMDVSRIDRGKGGDGWYGPMTEANIIAFQSANGLPANGVVDAATWR 232

Query: 164 AM 165
           A+
Sbjct: 233 AL 234


>gi|282861682|ref|ZP_06270746.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
 gi|282563498|gb|EFB69036.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
          Length = 334

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 4/67 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVD 158
            L  G+    V  L+ RL               +   VE AV+ FQ    +     G+  
Sbjct: 259 TLRRGDQGPEVAELQRRLREKWIYQGPD--DAHYSDRVERAVREFQRWVSVGTDAPGVYG 316

Query: 159 SSTLEAM 165
             T +A+
Sbjct: 317 PETRKAL 323


>gi|332710724|ref|ZP_08430665.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332350501|gb|EGJ30100.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 368

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                   V+ +++ L  +G      G    +    E  VK FQ ++GLD  G+V  +T 
Sbjct: 307 QPYMKGEDVRAIQQALAKAGYSLEPDG---VYGPGSEGVVKQFQEQNGLDVDGVVGPATR 363

Query: 163 EAM 165
             M
Sbjct: 364 AKM 366


>gi|1170043|sp|P45754|GSPA_AERHY RecName: Full=General secretion pathway protein A
 gi|551216|emb|CAA57225.1| ExeA [Aeromonas hydrophila]
          Length = 547

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 29/59 (49%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           L         FDA +++ ++ FQ   GL+P G+  S+TL  +NV     + +L+    R
Sbjct: 466 LQQPDRKVRRFDAELKNKLQQFQREQGLNPDGIAGSNTLLRLNVMAGEPMPKLEDESQR 524


>gi|56963693|ref|YP_175424.1| peptidoglycan binding domain-containing protein [Bacillus clausii
           KSM-K16]
 gi|56909936|dbj|BAD64463.1| peptidoglycan-binding domain-containing protein [Bacillus clausii
           KSM-K16]
          Length = 362

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +  R L  G+S   V++L+  L  +G  D    ++  F     SA+K FQ    L   G
Sbjct: 33  AMSDRTLSQGDSGEQVEQLQLLLTDNGVFDKED-INGTFGNSTASAIKEFQASEDLLVDG 91

Query: 156 MVDSSTLEAM 165
           +    TL A+
Sbjct: 92  IAGLQTLGAL 101



 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 53/151 (35%), Gaps = 12/151 (7%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETI 75
           +    M  ++ ++ +      E + +    + ++  FD        G  +   I   +  
Sbjct: 25  FSAPTMANAMSDRTLSQGDSGEQVEQLQLLLTDNGVFDKEDINGTFGNSTASAIKEFQAS 84

Query: 76  AQTE-KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
                  IA  Q + +        +  L  G+    V+ L+++L+          +   F
Sbjct: 85  EDLLVDGIAGLQTLGA--------LHALEHGDEGKLVEELQKQLLNLNYYKGE--VDGLF 134

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +  E AV+ FQ  +G+   G+   +T   +
Sbjct: 135 GSLTERAVENFQSDNGIAVDGIAGPATYSKL 165


>gi|67923403|ref|ZP_00516882.1| Peptidoglycan-binding domain 1:Staphylococcus nuclease (SNase-like)
           [Crocosphaera watsonii WH 8501]
 gi|67854738|gb|EAM50018.1| Peptidoglycan-binding domain 1:Staphylococcus nuclease (SNase-like)
           [Crocosphaera watsonii WH 8501]
          Length = 319

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L LG++  +V ++++ L     L PS      F +   +AV  +Q    L   G+V   
Sbjct: 101 SLKLGDTGEAVGQVQKYLAKLNYL-PSNSPDGIFGSQTNAAVLKYQKDKNLTIDGVVGCG 159

Query: 161 TLEAM 165
           T  ++
Sbjct: 160 TFSSL 164


>gi|294814609|ref|ZP_06773252.1| Lipoprotein [Streptomyces clavuligerus ATCC 27064]
 gi|294327208|gb|EFG08851.1| Lipoprotein [Streptomyces clavuligerus ATCC 27064]
          Length = 344

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 19/183 (10%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQD----ILSRGGWPELPIRPLHLGNSSVSVQRL 114
            D       P   +   A+T++A          I + G    +  R    G     V+ L
Sbjct: 89  ADAQRTRTTPKEQQAQKARTQRAPERPARSTDTIPAAGQATVVMSR----GAQGPRVREL 144

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRI 173
           + RL   G    +   +  +      AV+ FQ + GL  +G+ D++T   +  +      
Sbjct: 145 QARLAQIGWFGSAP--TGFYGRLTADAVRGFQGKRGLSVTGLTDTTTWRKLRGMTTAPTA 202

Query: 174 RQLQ-------VNLMRIK-KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
            +L            + + +L  + +  R + ++    SL  V +G V     V  G   
Sbjct: 203 EELSGTRKDPVKAAHKPRPRLDPRCLNGRVLCISKTTRSLSWVVDGTVRSTMDVRFGAEY 262

Query: 226 RQT 228
             T
Sbjct: 263 TPT 265


>gi|284929484|ref|YP_003422006.1| hypothetical protein UCYN_09450 [cyanobacterium UCYN-A]
 gi|284809928|gb|ADB95625.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
          Length = 181

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 46/156 (29%), Gaps = 52/156 (33%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++ +N+    +   +N +V     V +G+   +TP  +  +  ++ NP W          
Sbjct: 57  HISINLKERRVYVYQNSEVIKSYKVAIGKKGWETPKGNFAVMEMVENPQW---------- 106

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                 ++P                 +                     G  + +    I 
Sbjct: 107 ------KNP-------------WNGRIS------------------AAGPNSPLGERWIA 129

Query: 315 FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRVRN 348
           F  ++  Y   H T             + GCVR+RN
Sbjct: 130 FSQQDGKYVGFHGTAGEHSMGK---AVSHGCVRMRN 162


>gi|307265061|ref|ZP_07546621.1| carboxyl-terminal protease [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919859|gb|EFN50073.1| carboxyl-terminal protease [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 457

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 19/101 (18%)

Query: 82  IAFY-----QDILSRGGWPELPI------------RPLHLGNSSVSVQRLRERLIISGDL 124
           IA Y     + I  +G  P++ +              L +G+    V+ L++ L I    
Sbjct: 335 IARYKLPSGRYIDKQGLKPDIYVVNTQYTPSFKFNGTLKVGSRGNDVKILQKNLNILKF- 393

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +      F     +AVK  Q + GL P+G+ D +T +A+
Sbjct: 394 -NAGPEDGIFGPKTANAVKELQKKAGLTPTGVFDKNTYDAL 433


>gi|218704524|ref|YP_002412043.1| hypothetical protein ECUMN_1291 [Escherichia coli UMN026]
 gi|293404402|ref|ZP_06648396.1| L,D-transpeptidase YcfS [Escherichia coli FVEC1412]
 gi|298380179|ref|ZP_06989784.1| ycfS protein [Escherichia coli FVEC1302]
 gi|218431621|emb|CAR12500.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|291428988|gb|EFF02013.1| L,D-transpeptidase YcfS [Escherichia coli FVEC1412]
 gi|298279877|gb|EFI21385.1| ycfS protein [Escherichia coli FVEC1302]
          Length = 320

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRMAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|300896876|ref|ZP_07115366.1| LysM domain protein [Escherichia coli MS 198-1]
 gi|300359283|gb|EFJ75153.1| LysM domain protein [Escherichia coli MS 198-1]
          Length = 319

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRMAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|21283039|ref|NP_646127.1| carboxy-terminal processing proteinase ctpA [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49486261|ref|YP_043482.1| putative protease [Staphylococcus aureus subsp. aureus MSSA476]
 gi|297207922|ref|ZP_06924355.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300912006|ref|ZP_07129449.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|81696321|sp|Q6G9E1|CTPAL_STAAS RecName: Full=Probable CtpA-like serine protease
 gi|81762507|sp|Q8NWR2|CTPAL_STAAW RecName: Full=Probable CtpA-like serine protease
 gi|21204478|dbj|BAB95175.1| probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus aureus subsp. aureus MW2]
 gi|49244704|emb|CAG43139.1| putative protease [Staphylococcus aureus subsp. aureus MSSA476]
 gi|296887496|gb|EFH26396.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300886252|gb|EFK81454.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|329733430|gb|EGG69762.1| peptidase, S41 family [Staphylococcus aureus subsp. aureus 21193]
          Length = 496

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        +  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNETTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|296332614|ref|ZP_06875075.1| N-acetylmuramoyl-L-alanine amidase; skin element [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|296150532|gb|EFG91420.1| N-acetylmuramoyl-L-alanine amidase; skin element [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
          Length = 159

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 7/64 (10%)

Query: 109 VSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST--- 161
            +V++++  L         K    G+   +      AV+ FQ+ +GL   G+    T   
Sbjct: 94  DAVEQIQTALAALHFYPDKKAKNFGIDSYYGPQTADAVRRFQLMYGLSADGIYGPKTKAK 153

Query: 162 LEAM 165
           +EA+
Sbjct: 154 IEAL 157


>gi|325171175|ref|YP_004251150.1| putative Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1]
 gi|323512570|gb|ADX88025.1| putative Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1]
 gi|323512797|gb|ADX88251.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2006_D]
 gi|323513025|gb|ADX88478.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2006_C]
 gi|323513250|gb|ADX88702.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2006_B]
 gi|323513477|gb|ADX88928.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2006_A]
 gi|323513708|gb|ADX89158.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2005_A]
 gi|323513939|gb|ADX89388.1| Gp5 baseplate hub subunit and tail lysozyme (Shigella phage
           phiSboM-AG3) [Vibrio phage ICP1_2001_A]
 gi|323514167|gb|ADX89615.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2004_A]
          Length = 238

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           L  G+S   V+ ++E L   G    +KG+   F+   ESAVK FQ         G++ + 
Sbjct: 3   LKRGSSGADVKNMQEYLTALGY--DTKGVEGTFEGGTESAVKAFQKDMSFTVVDGIIGNQ 60

Query: 161 TLEAM 165
           T + +
Sbjct: 61  TAKHL 65


>gi|117921513|ref|YP_870705.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117613845|gb|ABK49299.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. ANA-3]
          Length = 562

 Score = 49.8 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P LP+  +   +S   +Q L   L    +  PS+ +S  FD  +E+ +K FQ +HGL   
Sbjct: 476 PNLPMLEISQKSSPGQLQWLENALAHVAN-RPSRRVSQ-FDLKLENDLKAFQSQHGLKAD 533

Query: 155 GMVDSSTLEAMN 166
           G+  + TL  +N
Sbjct: 534 GIAGNQTLVRLN 545


>gi|323706253|ref|ZP_08117820.1| spore cortex-lytic enzyme [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534417|gb|EGB24201.1| spore cortex-lytic enzyme [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 238

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GNS   V R++ RL   G  D    +   F      AV+ FQ  +GL+ +G+VD  T  A
Sbjct: 42  GNSGSDVSRVQSRLKDWGYYDG--PVDGFFGVRTWLAVRKFQANNGLNVTGIVDDQTKVA 99

Query: 165 M--NVP 168
           +  N+ 
Sbjct: 100 LGFNIS 105


>gi|84497560|ref|ZP_00996382.1| endopeptidase [Janibacter sp. HTCC2649]
 gi|84382448|gb|EAP98330.1| endopeptidase [Janibacter sp. HTCC2649]
          Length = 193

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 20/111 (18%)

Query: 105 GNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    V  L++RL   G  L    G    + +    AV   Q   GL   G V S+T +
Sbjct: 2   GDRGPKVLALQQRLSNLGYWLGEPDG---HYGSLTRQAVWALQKSAGLSRDGNVGSATQK 58

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           A+             N +R       ++    + +N+    L  V  G+V 
Sbjct: 59  AL------------ANGVR----PSTQLSGDGIDINLSRQILMIVRGGEVT 93


>gi|166031490|ref|ZP_02234319.1| hypothetical protein DORFOR_01187 [Dorea formicigenerans ATCC
           27755]
 gi|166028895|gb|EDR47652.1| hypothetical protein DORFOR_01187 [Dorea formicigenerans ATCC
           27755]
          Length = 287

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 8/63 (12%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + ++E+L +         +   F    ++AV  FQ  HGL   G+V  +T 
Sbjct: 230 RKGARGNITRLIQEKLGV--------AVDGIFGQKTKNAVIAFQRAHGLIADGIVGKNTW 281

Query: 163 EAM 165
            A+
Sbjct: 282 RAL 284


>gi|307353609|ref|YP_003894660.1| peptidoglycan-binding domain 1 protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307156842|gb|ADN36222.1| Peptidoglycan-binding domain 1 protein [Methanoplanus petrolearius
           DSM 11571]
          Length = 807

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 50/199 (25%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+    V  L+ +L   G  DP +     F      AV  FQ   GL   G++   
Sbjct: 2   SLKIGSKGEPVCELQSKLKELGY-DPGEVDGN-FGQVTRKAVSKFQENKGLSIDGVIGPE 59

Query: 161 TLEAMNV------PVDLRIR---QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           ++ A+ +      P   R++    L  N            G      NI A+  +AV++ 
Sbjct: 60  SVNALGIKTVLEKPEPERLKFRELLLTN--------PNYFG------NIKASKFKAVKSK 105

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           K                      +  + +NPY      + Q + +  +++D  Y      
Sbjct: 106 KQDTSF---------------EELKCLGYNPY------LSQLEAVIHIKKDYGY----GG 140

Query: 272 HMIDEKGKEVFVEEVDWNS 290
            +      E     +DWN+
Sbjct: 141 DICSCGTPEYVRFYIDWNN 159


>gi|319651171|ref|ZP_08005303.1| hypothetical protein HMPREF1013_01915 [Bacillus sp. 2_A_57_CT2]
 gi|317397153|gb|EFV77859.1| hypothetical protein HMPREF1013_01915 [Bacillus sp. 2_A_57_CT2]
          Length = 498

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L L  SS  V+  ++ L   G  DP +     FD   E AVK FQ    L+ +G++
Sbjct: 405 PDTELKLSVSSAQVKAGQQMLKALGY-DPGREDG-FFDEKTEQAVKEFQAAEKLEQNGVL 462

Query: 158 -DSSTLEAM 165
              STL  M
Sbjct: 463 SGQSTLRLM 471


>gi|290509071|ref|ZP_06548442.1| ynhG [Klebsiella sp. 1_1_55]
 gi|289778465|gb|EFD86462.1| ynhG [Klebsiella sp. 1_1_55]
          Length = 328

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 40/164 (24%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +    ++VN+    L     G+       + +G++  +TP + +RI + + NP W
Sbjct: 89  MLLPDVPREGIVVNLAELRLYYFPPGENQVQVYPLGIGQLGLETPEMTTRIGQKIPNPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I  + +                                    +          G 
Sbjct: 149 TPTAGIRARSL-----------------------------------EKGVTLPAVVPAGP 173

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
            N +    +     N  Y +H T  P   ++V    +SGC+R+ 
Sbjct: 174 YNPLGRYALRLAYGNGEYLIHGTNAP---DSVGLRVSSGCMRMN 214


>gi|206580759|ref|YP_002238022.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Klebsiella
           pneumoniae 342]
 gi|288935010|ref|YP_003439069.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
 gi|206569817|gb|ACI11593.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Klebsiella
           pneumoniae 342]
 gi|288889719|gb|ADC58037.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
          Length = 328

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 40/164 (24%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +    ++VN+    L     G+       + +G++  +TP + +RI + + NP W
Sbjct: 89  MLLPDVPREGIVVNLAELRLYYFPPGENQVQVYPLGIGQLGLETPEMTTRIGQKIPNPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I  + +                                    +          G 
Sbjct: 149 TPTAGIRARSL-----------------------------------EKGVTLPAVVPAGP 173

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
            N +    +     N  Y +H T  P   ++V    +SGC+R+ 
Sbjct: 174 YNPLGRYALRLAYGNGEYLIHGTNAP---DSVGLRVSSGCMRMN 214


>gi|121605872|ref|YP_983201.1| peptidoglycan-binding domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120594841|gb|ABM38280.1| Peptidoglycan-binding domain 1 protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 589

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 2/76 (2%)

Query: 106 NSSVSVQRLRERLIISGDLDP--SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           ++   +QRL  +L +        +       DA + + V+ FQ   GL+  G     T  
Sbjct: 512 STGPVIQRLASQLALLDGAPAPLASTAPPVLDAALRARVRAFQRAQGLEADGQPGPMTFM 571

Query: 164 AMNVPVDLRIRQLQVN 179
            ++        +LQ N
Sbjct: 572 QIDRATHADEPRLQTN 587


>gi|303241300|ref|ZP_07327805.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
            CD2]
 gi|302591139|gb|EFL60882.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
            CD2]
          Length = 1528

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 46/126 (36%), Gaps = 16/126 (12%)

Query: 110  SVQRLRERLIISGDLDPSKGLSV-------AFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             V  L++ L+  G L+     +         +    E+AVK FQ ++GLD  G V   T 
Sbjct: 1007 DVIVLQKILVSLGLLEMPIDPNTKTYVPFGTYAGLTENAVKKFQKKNGLDQDGKVGKITW 1066

Query: 163  EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
              + +P D    Q   N      +L+           IP  +L     G     + + VG
Sbjct: 1067 NKLMLPWDENSAQPDRNSWSYIYILQND----RFYTAIPQVTLSTPTKG-----TKIKVG 1117

Query: 223  RVDRQT 228
               R T
Sbjct: 1118 EPLRIT 1123


>gi|121535699|ref|ZP_01667503.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
 gi|121305730|gb|EAX46668.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
          Length = 238

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P++ + R L    +   V  L+ +L   G L         F A  E AV+ FQ   GL+ 
Sbjct: 167 PKVKVQRTLKKQMTGADVVMLQVKLKELGYLKARADG--IFGAVTEEAVRAFQADKGLEV 224

Query: 154 SGMVDSSTLEAMNV 167
           +G+V+   L+ + +
Sbjct: 225 NGVVNRQMLDLLGI 238



 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 52/170 (30%), Gaps = 68/170 (40%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
             G   +++ +P   LE   +G++  +  V VG+    TP+             W     
Sbjct: 52  PTGTVSIIIKVPERILEVYNDGQLYKKYRVAVGKSKTPTPVGE-----------W----- 95

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
                                         +V  ++ +W S     +           M 
Sbjct: 96  ------------------------------KVVWKDYNWGSGFGTRW-----------MG 114

Query: 310 STKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
                       Y +H T  P    ++ RF + GC+R+RN  + +L  W+
Sbjct: 115 L---NVP--WGVYGIHGTNNPW---SIGRFASHGCIRMRNKDVEELFEWV 156


>gi|302532771|ref|ZP_07285113.1| predicted protein [Streptomyces sp. C]
 gi|302441666|gb|EFL13482.1| predicted protein [Streptomyces sp. C]
          Length = 231

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+S   V  L+  L +   LD    +   + A  E+AV+  Q  +GL+  G+   +T  
Sbjct: 155 GSSGEHVSELQRALAVCHGLDTG-TIDGVYGAKTEAAVRTLQSWNGLNADGIYGPNTRN 212


>gi|271970428|ref|YP_003344624.1| hypothetical protein Sros_9263 [Streptosporangium roseum DSM 43021]
 gi|270513603|gb|ACZ91881.1| hypothetical protein Sros_9263 [Streptosporangium roseum DSM 43021]
          Length = 381

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 41/124 (33%), Gaps = 15/124 (12%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+ +  V+RL+ RL           ++  + A  + AV  FQ   GL     V  
Sbjct: 42  RTLRPGDYAKIVERLQRRLQELNFSPG--LVNGYYGAETQVAVWAFQKSQGLMAKDEVGP 99

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T  A+  P                  L      R V +++    L    + +  L S V
Sbjct: 100 ETWRALAHPH-------------WAPPLVSAGRPRRVEIDLRRQLLTVYRHNRPMLISHV 146

Query: 220 IVGR 223
             G 
Sbjct: 147 STGS 150


>gi|260588566|ref|ZP_05854479.1| spore cortex-lytic enzyme SleC [Blautia hansenii DSM 20583]
 gi|260541041|gb|EEX21610.1| spore cortex-lytic enzyme SleC [Blautia hansenii DSM 20583]
          Length = 421

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +PL +G+S   +++++E+L    +  P+     +   F    ++AVK FQ   GL  +
Sbjct: 337 PGQPLDIGSSGSKIRQIQEQLNAIANAYPALPKISVDGVFGENTQNAVKKFQQIFGLPAT 396

Query: 155 GMVDSSTLEAM 165
           G++D ST   +
Sbjct: 397 GIIDYSTWYEI 407


>gi|91788684|ref|YP_549636.1| peptidoglycan-binding domain-containing protein [Polaromonas sp.
           JS666]
 gi|91697909|gb|ABE44738.1| Peptidoglycan-binding domain 1 [Polaromonas sp. JS666]
          Length = 556

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 11/93 (11%)

Query: 91  RGGWPELPIRPLHLG------NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           +G +  L   P   G       S   V+ +  RL        ++      DA + + ++ 
Sbjct: 463 QGDFSTLWRSPAGYGGRPLDSQSGPVVEWVAARLTAVD--GTAQAGRPVLDASLRARLRT 520

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPV---DLRIR 174
           FQ+  GL   G +   T   +N      + R+R
Sbjct: 521 FQLAQGLPTDGRLGPLTFMQLNRTAGVDEPRLR 553


>gi|113971231|ref|YP_735024.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885915|gb|ABI39967.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-4]
          Length = 562

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           PS+ +S  FD  +E+ +K FQ +HGL   G+  + TL  +N
Sbjct: 506 PSRRVSQ-FDLKLENDLKAFQSQHGLKADGIAGNQTLVRLN 545


>gi|114048469|ref|YP_739019.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889911|gb|ABI43962.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-7]
          Length = 562

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           PS+ +S  FD  +E+ +K FQ +HGL   G+  + TL  +N
Sbjct: 506 PSRRVSQ-FDLKLENDLKAFQSQHGLKADGIAGNQTLVRLN 545


>gi|332710365|ref|ZP_08430313.1| peptidoglycan binding domain protein [Lyngbya majuscula 3L]
 gi|332350914|gb|EGJ30506.1| peptidoglycan binding domain protein [Lyngbya majuscula 3L]
          Length = 152

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            + +  L  GN+  +V+ L++ LI  G        +  FD Y    V  FQ  + L   G
Sbjct: 75  TVTMPVLTPGNNGDAVRFLQQILISLGY--TIVKFNANFDRYTYLGVTQFQRNNRLKVDG 132

Query: 156 MVDSSTLEAMNVPVDLRIR 174
           +V   T   +      R R
Sbjct: 133 VVGWHTWRKLGEASVSRRR 151


>gi|160933190|ref|ZP_02080579.1| hypothetical protein CLOLEP_02035 [Clostridium leptum DSM 753]
 gi|156868264|gb|EDO61636.1| hypothetical protein CLOLEP_02035 [Clostridium leptum DSM 753]
          Length = 439

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            + LG++  +V +L++RL+  G        +  FD   E  V  FQ    +   G+ D +
Sbjct: 363 TMKLGDTGDNVTKLQQRLLELG--HTYSEPTGTFDELTEQGVMNFQFLSDMVADGIADDA 420

Query: 161 TLEAM 165
            L+A+
Sbjct: 421 LLDAL 425


>gi|260597485|ref|YP_003210056.1| hypothetical protein CTU_16930 [Cronobacter turicensis z3032]
 gi|260216662|emb|CBA29996.1| Uncharacterized protein ycfS [Cronobacter turicensis z3032]
          Length = 324

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 42/169 (24%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVD--RQTPILHSRINRIMF 240
           +++L        +L+NI    L     G K      + +G++D    TP + + +++   
Sbjct: 94  RQMLLPDAPREGILINIAELRLYYFPPGEKSVTVYPIGIGQLDGDTLTPTMQTTVSQKRA 153

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W  P + I+                        K + + +  V              
Sbjct: 154 NPTWT-PTANIR---------------------ARYKAQGIDLPPVV------------- 178

Query: 301 DPGKINAMASTKIEFYSRNNTYM-HDTPEPILFNNVVRFETSGCVRVRN 348
             G  N M    I   +    Y+ H T     F   +R  +SGC+R+R+
Sbjct: 179 PAGPENPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 224


>gi|311068413|ref|YP_003973336.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage-related protein
           [Bacillus atrophaeus 1942]
 gi|310868930|gb|ADP32405.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage-related protein
           [Bacillus atrophaeus 1942]
          Length = 274

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 4/66 (6%)

Query: 104 LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                 +V ++++ L            + G+   + A   +AVK FQ  +GL   G+   
Sbjct: 204 PLMKGAAVTKIQKALAALYFYPDKGAENNGIDGYYGAKTANAVKRFQSMYGLTADGIYGP 263

Query: 160 STLEAM 165
            +   +
Sbjct: 264 KSKAKL 269


>gi|149911042|ref|ZP_01899670.1| general secretion pathway protein a [Moritella sp. PE36]
 gi|149805868|gb|EDM65856.1| general secretion pathway protein a [Moritella sp. PE36]
          Length = 546

 Score = 49.8 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 4/64 (6%)

Query: 100 RPLHLGNSSVSVQRL-RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             L   +    ++ L R    + G+          FD  +   V  FQ + GL   G+V 
Sbjct: 462 NSLKQNDKGELIRWLDRNISAVLGE---KAASGAKFDWPLMKKVMRFQQQSGLSADGIVG 518

Query: 159 SSTL 162
             T+
Sbjct: 519 PQTM 522


>gi|291300295|ref|YP_003511573.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290569515|gb|ADD42480.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 364

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 14  FFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE 73
           F  Y  L  G S  E      +LD+    +     N  +D   A+      +DI +    
Sbjct: 221 FKKYPALKDGDSGDEVTAAQCLLDKSGRPTTDGDPNGEYDKATAKSVKQFQADIGLKETG 280

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            I            +L RG         L  G    +V RL+  L  +  L+ +  +   
Sbjct: 281 EIDSHTWT-----ALLGRG-----SNVQLQEGEEGRNVSRLQRALTAA--LETTVPIDGK 328

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           F A   +A K +Q + GLD  G+V  +T  A+
Sbjct: 329 FTAETTAAAKKYQEKAGLDADGIVGVNTWRAL 360


>gi|317127871|ref|YP_004094153.1| peptidase S8 and S53 subtilisin kexin sedolisin [Bacillus
           cellulosilyticus DSM 2522]
 gi|315472819|gb|ADU29422.1| peptidase S8 and S53 subtilisin kexin sedolisin [Bacillus
           cellulosilyticus DSM 2522]
          Length = 1027

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 25/185 (13%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND----RFDNFLARVDMGIDSDI----- 67
           Y ++  G+   +  +      EI++    +  +     +    L+ +D  + ++      
Sbjct: 657 YGLVATGMITTDTKVKIQ---EILSSPLRNGQHHDSAIQLKINLSFLDFHVSNNPTTYYG 713

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSVSVQRLRERLIISGDL 124
           P   ++     EK       I       ++      P+ LG     V  L+  L I G  
Sbjct: 714 PTTERKVREFQEKYGLRVNGIADEITLKKIESLINSPMALGTYRKDVITLKNNLAILGF- 772

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM---------NVPVDLRIRQ 175
             S   +  +    E  V+ FQ  +GL+ +G+    TLE +         N   D    Q
Sbjct: 773 HISNNPTTYYGPTTERVVREFQDYYGLEVTGIASQETLEKIEEILSSPLRNGQHDEGAIQ 832

Query: 176 LQVNL 180
           L++NL
Sbjct: 833 LKINL 837



 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           E+   PL  G       +L+  L + G    S   +  +    E  V+ FQ  +GL  +G
Sbjct: 815 EILSSPLRNGQHDEGAIQLKINLSLLGF-HISNNPTTHYGPTTERKVREFQQVNGLKVNG 873

Query: 156 MVDSSTLE 163
           + D  TL+
Sbjct: 874 IADKVTLK 881



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 99   IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              PL  G    S  +L+  L + G    S   +  +    E  V+ FQ  HGL  +G+ D
Sbjct: 958  SSPLRNGQHHESAIQLKINLSLLGF-HVSNNPTTYYGPMTERRVREFQSAHGLIVNGIAD 1016

Query: 159  SSTLE 163
              TL 
Sbjct: 1017 EITLA 1021



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 10/89 (11%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            + LG  S  V  L+  L   G    S   +  +    E  V+ FQ  +GL  +G+    
Sbjct: 890 TMALGTHSQEVVTLKNNLATLGF-HISNNPTTYYGPITEQVVREFQRYYGLKMTGVASQE 948

Query: 161 TLEAM---------NVPVDLRIRQLQVNL 180
           TL  +         N        QL++NL
Sbjct: 949 TLNKIESVLSSPLRNGQHHESAIQLKINL 977



 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L+  G L+ S  ++  F+   E A++ FQ  +GL  +GM+ + T
Sbjct: 627 LMRLGFLNNSD-VNGEFNIETEVAIRDFQEYYGLVATGMITTDT 669


>gi|333026677|ref|ZP_08454741.1| hypothetical protein STTU_4183 [Streptomyces sp. Tu6071]
 gi|332746529|gb|EGJ76970.1| hypothetical protein STTU_4183 [Streptomyces sp. Tu6071]
          Length = 196

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 14/123 (11%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM--NVPVD 170
            L+ RL   G        +  F      A+  FQ   GL  SG++D++T   +    P  
Sbjct: 3   ALQARLWSLGFFRQQP--TGYFGDVTAQALAAFQRDRGLAASGVLDAATWARLRAAGPAP 60

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVL-----VNIPAASLEAVENGKVGLRSTVIVGRVD 225
            +       L     L   +   R +      V+  + +L  + +G+V     V  G   
Sbjct: 61  TKA-----ALYPETTLPPTRPDPRCLTGRALCVSKKSRTLAWMVDGRVVSVMDVRFGSAY 115

Query: 226 RQT 228
             T
Sbjct: 116 TPT 118


>gi|162456517|ref|YP_001618884.1| hypothetical protein sce8234 [Sorangium cellulosum 'So ce 56']
 gi|161167099|emb|CAN98404.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 834

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P   L  G     V+  ++ L+     L P  G    F A  E+A ++FQ   GL  +G 
Sbjct: 392 PGGGLARGAKGPEVKAWQQHLLTWRAGLLPRFGADGEFGAETEAATRIFQQEMGLPVTGA 451

Query: 157 VDSSTLEAM 165
           V   T EAM
Sbjct: 452 VGPETREAM 460


>gi|319784207|ref|YP_004143683.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170095|gb|ADV13633.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 334

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 81/288 (28%), Gaps = 110/288 (38%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-----------------IRQLQVNLMRI 183
           AV  FQ  +GL   G +   T + + V    R                  R++   + R+
Sbjct: 74  AVSAFQAANGLPADGKLTRETWDKL-VATSSRPAIETYDLTRKDVHGPFTRRIPARMERM 132

Query: 184 KKLLE-------QKMGLRY---------------------------------------VL 197
            +L         +KM  R+                                       V 
Sbjct: 133 ARLPRLAYHNALEKMAERFHISEQLLERLNPGIGFRKAGQKLLVPAVTRGDPPQDIASVE 192

Query: 198 VNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           V+  A  +  ++ +GKV       +G  ++  P   + + R++ +P +            
Sbjct: 193 VDKSARQVRVLDPSGKVLATYPASIGSQEKPAPSGQAEVKRVVHHPTYH----------- 241

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                DP++                              F      G  N + S  I+  
Sbjct: 242 ----YDPEFAFK--------------------GVRSKRPFTI--AAGPNNPVGSVWIDLS 275

Query: 317 -SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
                   H TP+P     + +  + GC+R+ N    DL   + K T 
Sbjct: 276 IDSYGI--HGTPDPG---KIGKTFSHGCIRLTNWDAEDLASEVQKGTK 318


>gi|156934400|ref|YP_001438316.1| hypothetical protein ESA_02231 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532654|gb|ABU77480.1| hypothetical protein ESA_02231 [Cronobacter sakazakii ATCC BAA-894]
          Length = 324

 Score = 49.8 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 42/169 (24%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVD--RQTPILHSRINRIMF 240
           +++L        +L+N+    L     G+       + +G++D    TP + + +++   
Sbjct: 94  RQMLLPDAPREGILINLAELRLYYFAPGENTVTVYPIGIGQLDGDTLTPTMQTTVSQKRA 153

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W    +I  +             K   I +                           
Sbjct: 154 NPTWTPTANIRAR------------YKAQGIDL-----------------------PAVM 178

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
             G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 179 PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 224


>gi|53804993|ref|YP_113349.1| ErfK/YbiS/YcfS/YnhG family protein [Methylococcus capsulatus str.
           Bath]
 gi|53758754|gb|AAU93045.1| ErfK/YbiS/YcfS/YnhG family protein [Methylococcus capsulatus str.
           Bath]
          Length = 361

 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 71/213 (33%), Gaps = 49/213 (23%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVEN-GKVGLRSTVI-----VGRVDRQTPILHSRINR 237
           ++ +        ++VNIP   L    + GK    + V+     +GR+D ++P+  +++  
Sbjct: 86  RQFILPDAPRNGIVVNIPEMRLYFYPSAGKGAKPTKVVTYPISIGRMDWRSPLGLTKVVA 145

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
            + +P W  P SI  +                       K  E+  + V           
Sbjct: 146 KVKDPVWRPPASIKAE---------------------HAKNGEILPDVV----------- 173

Query: 298 FRQDPGKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
                G  N +    +           H T +   +   +R  T GC+R+    D+    
Sbjct: 174 ---PAGPNNPLGQFAMRLGVPGYLI--HGTDQDKSYGIGMR-VTHGCIRM-YPEDVAKLF 226

Query: 357 LKDTPTWSRYHIEEVVK---TRKTTPVKLATEV 386
            +         + + VK     +T  ++++  +
Sbjct: 227 PEVAVGTPVNLVNQPVKLGWQGETLYIEVSESL 259


>gi|77919622|ref|YP_357437.1| hypothetical protein Pcar_2026 [Pelobacter carbinolicus DSM 2380]
 gi|77545705|gb|ABA89267.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 303

 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 57/184 (30%), Gaps = 49/184 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTV---IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           + +N+    L  V   +  LR  V    +G     TP     I   + +P W  P SI +
Sbjct: 105 ITINLAEFRLYYVWQEQNRLRVRVYPVGIGSSGWDTPQGEFEITEKIVHPVWYAPASI-R 163

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           K+       +P+                                  R   G  N +    
Sbjct: 164 KE-------NPRLAA-------------------------------RIPAGPDNPLGEYW 185

Query: 313 IEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           +   +R      H T +P     V R  + GC+R+    D+     +  P  +   I + 
Sbjct: 186 LGLSARGYGI--HGTSKPY---GVGRRISHGCLRL-YPADIRDLFARVKPGTTVRIIRQP 239

Query: 372 VKTR 375
           VKT 
Sbjct: 240 VKTG 243


>gi|21233610|ref|NP_639527.1| hypothetical protein XCC4193 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770575|ref|YP_245337.1| hypothetical protein XC_4282 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188993806|ref|YP_001905816.1| hypothetical protein xccb100_4411 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21115476|gb|AAM43409.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575907|gb|AAY51317.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167735566|emb|CAP53784.1| hypothetical protein xcc-b100_4411 [Xanthomonas campestris pv.
           campestris]
          Length = 449

 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGL 151
           P +    + +G SS  VQ++++ L   G              +   +++AV  +Q  HGL
Sbjct: 217 PFVDDGTIRIGGSSEMVQKVQQTLNAEGYRGADNQPLQEDGVYRLSMQAAVINYQQAHGL 276

Query: 152 DPSGMVDSSTLEAM 165
             +G +D +TL+ +
Sbjct: 277 SQTGDIDPATLQQI 290


>gi|255659023|ref|ZP_05404432.1| LysM domain protein [Mitsuokella multacida DSM 20544]
 gi|260848808|gb|EEX68815.1| LysM domain protein [Mitsuokella multacida DSM 20544]
          Length = 187

 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+   +V++++  LI  G L  +            +A+K FQ  +GLD  G+  + T 
Sbjct: 21  RQGSRGPAVRQVQSLLIEQGWLTGAADGICG--NQTVAAIKSFQKANGLDADGVCGNGTY 78

Query: 163 EAM 165
             +
Sbjct: 79  SVL 81


>gi|212640371|ref|YP_002316891.1| periplasmic protease [Anoxybacillus flavithermus WK1]
 gi|212561851|gb|ACJ34906.1| Periplasmic protease [Anoxybacillus flavithermus WK1]
          Length = 491

 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 23/114 (20%)

Query: 82  IAFYQDILSRGGW-------PELPIR--------------PLHLGNSSVSVQRLRERLII 120
           +  Y+ +   G W       P + ++              PL    ++  V+  ++ L  
Sbjct: 363 LTLYKWLTPNGNWIHEKGIQPNVQVKQPDFFYAHPLQIDKPLAYDMNNEQVKSAQQMLKG 422

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
            G  DP +     F    E AV+ FQ  +GL  +G +D  T   +   V   +R
Sbjct: 423 LGF-DPGREDG-YFSKQTEQAVQAFQKANGLQATGKIDKQTANMLQTKVMEAVR 474


>gi|15895098|ref|NP_348447.1| fused Zn-dependent amidase/peptidase/peptodoglycan-binding
           domain-containing protein [Clostridium acetobutylicum
           ATCC 824]
 gi|15024797|gb|AAK79787.1|AE007691_5 Fusion of predicted Zn-dependent amidase/peptidase (cell wall
           hydrolase/DD-carboxypeptidase family) and
           uncharacterized domain of ErfK family;
           peptodoglycan-binding domain [Clostridium acetobutylicum
           ATCC 824]
 gi|325509236|gb|ADZ20872.1| peptodoglycan-binding domain protein [Clostridium acetobutylicum EA
           2018]
          Length = 281

 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             LG+S   V+ ++++L   G    + G    F    + AV+ FQ +H +   G V   T
Sbjct: 57  FKLGSSGSDVKSIQDKLNNYGYAITADGK---FGPSTDWAVRDFQYKHNIAMDGSVSDQT 113

Query: 162 LEAMNVPVDL 171
           +  +N     
Sbjct: 114 MNLLNQTPTD 123


>gi|297568912|ref|YP_003690256.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924827|gb|ADH85637.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 348

 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 58/165 (35%), Gaps = 46/165 (27%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAV---ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           ++L Q      +++N+P   L       + ++ +   V +G  DR TP+    I + + +
Sbjct: 133 RVLPQIPSEPGMVLNLPEKRLYYFYRRNDNRLVISFPVGIGTADRGTPLGDFSITQKLTD 192

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W +P S+                                         + P+      
Sbjct: 193 PSWTVPASV---------------------------------------REQRPHLPAIVP 213

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           PG  N M +  ++  S  + ++H T  P    ++ R  T GC R+
Sbjct: 214 PGPDNPMGAYALQL-SGGSYFIHGTNRPW---SIGRRATLGCARL 254


>gi|218288281|ref|ZP_03492580.1| hypothetical protein AaLAA1DRAFT_0165 [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241640|gb|EED08813.1| hypothetical protein AaLAA1DRAFT_0165 [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 300

 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 33/102 (32%), Gaps = 18/102 (17%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +    + AV  F+  HGL   G         +         +L + L      L  
Sbjct: 123 DPDRYTEITKGAVMRFEADHGLRVDGYTGPRVRRTL---------ELALAL-----HLTA 168

Query: 190 KMGLRYVLVN--IPAASLEAVENGK-VGLRSTVIVGRVDRQT 228
               R V+V+  IP   L   E+G+ V  ++    G     T
Sbjct: 169 TQPYRLVMVDQSIP-QQLRVWEDGRGVIFQTVCSTGVPAAPT 209


>gi|218529555|ref|YP_002420371.1| peptidoglycan-binding protein [Methylobacterium chloromethanicum
           CM4]
 gi|218521858|gb|ACK82443.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           chloromethanicum CM4]
          Length = 232

 Score = 49.8 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 19/56 (33%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            V  ++  L+  G      G          +AV  FQ   GL   G+    T  A+
Sbjct: 2   DVAAIQRALLARGYDLGKSGADGDAGPRTIAAVTAFQRSAGLVADGIAGPKTQAAL 57


>gi|157692648|ref|YP_001487110.1| peptidase [Bacillus pumilus SAFR-032]
 gi|157681406|gb|ABV62550.1| S41 family carboxy-terminal processing peptidase [Bacillus pumilus
           SAFR-032]
          Length = 461

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 10/100 (10%)

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            Q + ++  Y  +      P L P +   L +S   V+  ++       LD     +  +
Sbjct: 353 PQVKASLPSYAKL------PYLSPKKTYQLNDSGDEVKAAQKMFQA---LDYKAKANGEY 403

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           D   ++ VK FQ  + L   G++   T   +   +  +++
Sbjct: 404 DQAFQAIVKKFQTDNDLKADGILTGDTTTVLMTKIQDKLK 443


>gi|270160068|ref|ZP_06188724.1| ErfK/YbiS/YcfS/YnhG family protein [Legionella longbeachae D-4968]
 gi|289165151|ref|YP_003455289.1| hypothetical protein LLO_1815 [Legionella longbeachae NSW150]
 gi|269988407|gb|EEZ94662.1| ErfK/YbiS/YcfS/YnhG family protein [Legionella longbeachae D-4968]
 gi|288858324|emb|CBJ12192.1| hypothetical protein LLO_1815 [Legionella longbeachae NSW150]
          Length = 295

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 64/185 (34%), Gaps = 47/185 (25%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L    EN  V L   + +GR   +TP+  +++   + NP W  P   ++++
Sbjct: 100 IVINLAEYRLYYFPENENVVLTFPIGIGRKGWKTPLGVTKVVAKVANPKWR-PTKNLREE 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                 ++  +L                 EE+                G  N +    + 
Sbjct: 159 ----AEKNGDFL----------------PEEL--------------PSGPYNPLGQYTLR 184

Query: 315 F--YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH-IEEV 371
                      H T         V   ++GC+R+    D+   L +  P  ++   I + 
Sbjct: 185 LGWP-TFLI--HGTNRQDGIGARV---SAGCIRM-YPDDI-ELLFRSVPVGTQVRIINQP 236

Query: 372 VKTRK 376
           VKT K
Sbjct: 237 VKTGK 241


>gi|297201935|ref|ZP_06919332.1| lipoprotein [Streptomyces sviceus ATCC 29083]
 gi|197712688|gb|EDY56722.1| lipoprotein [Streptomyces sviceus ATCC 29083]
          Length = 279

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 26/137 (18%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST--- 161
           G+S   V+ L+ RL     L    G + ++D   E AVK FQ + GL  +G  D+ T   
Sbjct: 77  GDSGRDVRELQARLRQVAWL--YDGPTGSYDDLTERAVKGFQGKRGLPRTGRTDTVTWKR 134

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLL----------EQKMGLRYVLVNIPAASLEAVENG 211
           L+AM                  +  L           + +  R + ++  + +L  + +G
Sbjct: 135 LKAMTHEPGK-----------WELYLMGGQPADAPDPRCLTGRVLCISKTSRTLRWMIDG 183

Query: 212 KVGLRSTVIVGRVDRQT 228
           +  +  +V  G V   T
Sbjct: 184 RTVMTVSVRFGSVGTPT 200


>gi|304409318|ref|ZP_07390938.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS183]
 gi|307303676|ref|ZP_07583429.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica BA175]
 gi|304351836|gb|EFM16234.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS183]
 gi|306912574|gb|EFN42997.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica BA175]
          Length = 557

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P LP+  +   +S   +Q L   L      + +      FD  +E+ +K FQ +HGL   
Sbjct: 471 PNLPMMDISQKSSPGQLQWLENALAHVN--NRNARRVNQFDVQLENDLKSFQSQHGLKAD 528

Query: 155 GMVDSSTLEAMN 166
           G+  + TL  +N
Sbjct: 529 GIAGNQTLVRLN 540


>gi|217974314|ref|YP_002359065.1| peptidoglycan-binding domain 1 protein [Shewanella baltica OS223]
 gi|217499449|gb|ACK47642.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS223]
          Length = 557

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P LP+  +   +S   +Q L   L      + +      FD  +E+ +K FQ +HGL   
Sbjct: 471 PNLPMMDISQKSSPGQLQWLENALAHVN--NRNARRVNQFDVQLENDLKSFQSQHGLKAD 528

Query: 155 GMVDSSTLEAMN 166
           G+  + TL  +N
Sbjct: 529 GIAGNQTLVRLN 540


>gi|282881413|ref|ZP_06290089.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304711|gb|EFA96795.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
          Length = 289

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 4/74 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPS----KGLSVAFDAYVESAVKLFQMRHGL 151
            +  R L  G     V  L   L     ++ S    K     +DA + SAVK FQ   GL
Sbjct: 121 SIGDRTLKTGIHGSDVTSLTGYLATGLYINRSWIKEKEGYALYDATIASAVKHFQKDAGL 180

Query: 152 DPSGMVDSSTLEAM 165
             +G+ D +T+  +
Sbjct: 181 PQTGVADQTTINKL 194



 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 6/66 (9%)

Query: 106 NSSVSVQRLRERLIISGDLDPSK------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +    V  L   L  +G     K           F   + +AV+ FQ  + L  +G  D 
Sbjct: 219 DKGTDVTELVNLLTKAGFAPDPKKIVMTSDGRTEFTKDIATAVRFFQAYNNLSVTGRADE 278

Query: 160 STLEAM 165
           +T++A+
Sbjct: 279 ATIKAL 284


>gi|94266656|ref|ZP_01290333.1| ErfK/YbiS/YcfS/YnhG [delta proteobacterium MLMS-1]
 gi|93452703|gb|EAT03254.1| ErfK/YbiS/YcfS/YnhG [delta proteobacterium MLMS-1]
          Length = 328

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 52/170 (30%)

Query: 184 KKLLEQKMG--LRYVLVNIPAASLEAVE---NGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           +++L          +++N+    L       +    L   V +G    +TP    RI   
Sbjct: 117 RRVLPDFTPTAEPAIVINLAEKRLYYFHRRGDEAAVLTFPVGIGADYGETPTGEYRITNK 176

Query: 239 MFNPYWVIPRSI--IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
           +  P W +P SI   + ++  ++                                     
Sbjct: 177 LVEPSWTVPPSIRQRRPELPPIV------------------------------------- 199

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                PG  N M S  ++  S  + Y+H T  P    ++ R  T GC+R+
Sbjct: 200 ----PPGPDNPMGSHALQL-SGGSYYIHGTNRPW---SIGRRATQGCLRL 241


>gi|56750889|ref|YP_171590.1| hypothetical protein syc0880_c [Synechococcus elongatus PCC 6301]
 gi|56685848|dbj|BAD79070.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 208

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 36/147 (24%), Gaps = 52/147 (35%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +    +        V +G+   +TP    R+   + NP W  P                
Sbjct: 92  RVTVYRDRLAIASYPVGIGKPGWETPRGTFRVMSKIVNPTWQHPW--------------- 136

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--TKIEFYSRNNT 321
                         G  V                    PG  N +           +N+ 
Sbjct: 137 -------------NGSLV-------------------PPGPNNPLGDRWIGFWTDGKNSI 164

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRN 348
             H T    L        + GCVR++N
Sbjct: 165 GFHGTTAESLIGQ---AVSHGCVRMKN 188


>gi|323464476|gb|ADX76629.1| carboxy-terminal processing proteinase ctpA, putative
           [Staphylococcus pseudintermedius ED99]
          Length = 509

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 13/92 (14%)

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           A Y++I        +P +   H G     V+ ++  L   G       +   ++A + +A
Sbjct: 410 ADYENI------SVIPTKTTYHQGQEDKHVKSIKIGLKALGY--DVGTIDEHYNAQLTTA 461

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           VK FQ ++ L  +GM +  T    N     R+
Sbjct: 462 VKQFQQKNDLTANGMFNKET----NGVFTERL 489


>gi|307825945|ref|ZP_07656160.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
 gi|307733064|gb|EFO03926.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
          Length = 338

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 45/197 (22%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRI--KKLLEQKMGLRYVLVNIPAASLEAV---ENG 211
           +  + +  +N P   R +  +  ++R+  +++L        + +NI    +      + G
Sbjct: 63  LGQTEIVRLN-PDVDRWQVKKDEIVRLSNRRILPDTPHEG-ITLNIAEYRMYYYPPTQKG 120

Query: 212 K--VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
                +     +GR D +TP+  + I + + +P W  P SI ++                
Sbjct: 121 VAPQVMSYAHGIGRQDWKTPLGKTSIVQKVKDPAWHPPESIRRE---------------- 164

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
                              ++           PG  N + +  +         +H T   
Sbjct: 165 -------------------HAANGDPLPAVVQPGPHNPLGAYMLHLAVPGGYLIHGTDID 205

Query: 330 ILFNNVVRFETSGCVRV 346
            ++   +   T GCVR+
Sbjct: 206 KIYGIGM-QITHGCVRM 221


>gi|168467173|ref|ZP_02701015.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|195630351|gb|EDX48977.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|288922819|ref|ZP_06416985.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EUN1f]
 gi|288345834|gb|EFC80197.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EUN1f]
          Length = 300

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 8/83 (9%)

Query: 98  PIRP--LHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P  L  G +   +  L+ +L+ +G  L    G    F    + AV   Q   G+   
Sbjct: 99  PTGPPILRPGATGPEILELQRQLMTAGYWLGTPDG---TFGLLTQQAVLAVQKTAGIGLD 155

Query: 155 GMVDSSTLEAM--NVPVDLRIRQ 175
           G+V  +T  A+   V  D R  Q
Sbjct: 156 GLVGPATRAAIARGVRPDARSTQ 178


>gi|254384384|ref|ZP_04999726.1| hypothetical protein SSAG_04028 [Streptomyces sp. Mg1]
 gi|194343271|gb|EDX24237.1| hypothetical protein SSAG_04028 [Streptomyces sp. Mg1]
          Length = 120

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMV 157
           R L   ++   V  L+ RL   G    S  L   +D +++ A + FQ ++G+     G+ 
Sbjct: 50  RTLRRHDTGPEVVDLQRRLAQLGLW--SLPLRGRYDRHLDDAAQRFQAKYGVRGDPPGVY 107

Query: 158 DSSTLEAM 165
             +T + +
Sbjct: 108 GPATRQRL 115


>gi|76825185|gb|AAI06861.1| Mmp21 protein [Mus musculus]
          Length = 415

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 45/135 (33%), Gaps = 34/135 (25%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              +    + +      D       P+   + IA    A    Q  L + GW E+P    
Sbjct: 15  WLVAPQPTQPERLFHSRDRSDLEPSPLSQAKPIADLHDA----QSFLLKYGWSEIPSPK- 69

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                                   S G+ V F   +  AV+ FQ  + L  SG +DS TL
Sbjct: 70  -----------------------ESAGVPVGF--TLAQAVRRFQKANRLPASGELDSPTL 104

Query: 163 EAMNVP----VDLRI 173
            AMN P     D R+
Sbjct: 105 AAMNKPRCGVPDTRL 119


>gi|220916978|ref|YP_002492282.1| Peptidoglycan-binding domain 1 protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954832|gb|ACL65216.1| Peptidoglycan-binding domain 1 protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 136

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 91  RGGWPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           RG  P +P  P   L  G        LR+R    G L   +   +  D    +A++ FQ 
Sbjct: 47  RGERPRVPSSPEALLAPGAVGEIQDALRDR----GYLGAHRRGEL--DRATSAALRRFQE 100

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDL 171
             GL  +G  D  TL  ++V    
Sbjct: 101 AQGLAATGAPDRETLRRLHVDPAR 124


>gi|169335908|ref|ZP_02863101.1| hypothetical protein ANASTE_02343 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258646|gb|EDS72612.1| hypothetical protein ANASTE_02343 [Anaerofustis stercorihominis DSM
           17244]
          Length = 279

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
               G+    ++  +E LI +G L  +   +  FD+   +AVK +Q + GL  +G +D+ 
Sbjct: 213 TYKQGHKGDVIKDYQEILIRTGYLKGTA--NGTFDSKTTAAVKSYQTKKGLSVTGNLDTK 270

Query: 161 TLEAM 165
           T+EA+
Sbjct: 271 TMEAL 275



 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +    G S   +   +  L     L  S   +  FD+    AVK +Q   G+  +  +D
Sbjct: 75  SKTFSEGESGDEILSYKLILYYLDYL--SDTPNNTFDSTTTKAVKEYQTSRGIKETSKLD 132

Query: 159 SSTLEAM 165
            +T++ +
Sbjct: 133 KTTMQTL 139



 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
              G SS  +++    L   G L      +  + A  + A + +Q    L  +G +   T
Sbjct: 146 YKTGKSSEDIKKYNYILYYLGYLTKEP--NSTYTAETKVACENYQKAKSLPVTGTMTPQT 203

Query: 162 LEAM 165
             ++
Sbjct: 204 RRSL 207


>gi|119484925|ref|ZP_01619407.1| hypothetical protein L8106_15670 [Lyngbya sp. PCC 8106]
 gi|119457743|gb|EAW38867.1| hypothetical protein L8106_15670 [Lyngbya sp. PCC 8106]
          Length = 164

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG +  +V  L+  L I G    +  +   F +  E AVK FQ  + L   G+V S T
Sbjct: 17  LQLGKTGDNVIYLQNSLNIVG---ANLRIDGVFGSDTEIAVKRFQRDNELIIDGIVGSQT 73

Query: 162 LEAM 165
              +
Sbjct: 74  WRIL 77



 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +GN+   V  L+  L    +++ +  +   F      AVKLFQ++HGL  +G+V  +T
Sbjct: 95  LKVGNTGKIVFELQTHLN---NIEANLVVDGIFGVKTLDAVKLFQLKHGLVANGIVGLNT 151

Query: 162 LEA-MN 166
            +  +N
Sbjct: 152 WKEILN 157


>gi|89098735|ref|ZP_01171616.1| carboxyl-terminal processing protease [Bacillus sp. NRRL B-14911]
 gi|89086411|gb|EAR65531.1| carboxyl-terminal processing protease [Bacillus sp. NRRL B-14911]
          Length = 475

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +PL L  ++  V+  +  L   G L P +     F    E+AVK FQ   GL+ +G VDS
Sbjct: 386 KPLVLDMNNEQVKNAQIMLDGLG-LSPGRKDG-YFSEATETAVKAFQQHQGLEATGKVDS 443

Query: 160 STLEAM 165
            T  A+
Sbjct: 444 KTAAAL 449


>gi|312143244|ref|YP_003994690.1| Peptidoglycan-binding domain 1 protein [Halanaerobium sp.
           'sapolanicus']
 gi|311903895|gb|ADQ14336.1| Peptidoglycan-binding domain 1 protein [Halanaerobium sp.
           'sapolanicus']
          Length = 337

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +   +V++ ++ L   G       +   +      AV  FQ   GL   G++   T
Sbjct: 78  LRENDRGENVKKAQKILRQKGFYQGE--IDGHYGHQTRLAVIKFQKIAGLQADGVLGPKT 135

Query: 162 LEAM 165
           L  +
Sbjct: 136 LSKL 139


>gi|326803551|ref|YP_004321369.1| peptidase, S41 family [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650259|gb|AEA00442.1| peptidase, S41 family [Aerococcus urinae ACS-120-V-Col10a]
          Length = 497

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
              E  +  Y ++    G      +   LG  S  ++ ++ +L + G L+ S  +   FD
Sbjct: 387 PDIEAKLPDYSELSLVDG-----SQNYQLGEESDKIKNIQAQLALLGYLE-SDQVQGKFD 440

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              ++A+  FQ  H L+ +G V+  T +A+
Sbjct: 441 EQTQTALGAFQADHELEKTGQVNDETAQAL 470


>gi|152999733|ref|YP_001365414.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS185]
 gi|151364351|gb|ABS07351.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS185]
          Length = 557

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
             FD  +E+ +K FQ +HGL   G+  + TL  +N+ +  +  +L  N +R
Sbjct: 506 NQFDVQLENDLKSFQSQHGLKADGIAGNQTLVRLNLYLSQQGPRLTDNGVR 556


>gi|56413799|ref|YP_150874.1| hypothetical protein SPA1635 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362722|ref|YP_002142359.1| hypothetical protein SSPA1520 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128056|gb|AAV77562.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094199|emb|CAR59703.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|15894296|ref|NP_347645.1| cell wall biogenesis enzymedomain-containing related to
           L-alanoyl-D-glutamate peptidase); peptodoglycan-binding
           domain [Clostridium acetobutylicum ATCC 824]
 gi|15023918|gb|AAK78985.1|AE007616_7 Cell wall biogenesis enzyme (N-terminal domain related to
           N-Acetylmuramoyl-L-alanine amidase and C-terminal domain
           related to L-alanoyl-D-glutamate peptidase);
           peptodoglycan-binding domain [Clostridium acetobutylicum
           ATCC 824]
 gi|325508424|gb|ADZ20060.1| Cell wall biogenesis enzyme [Clostridium acetobutylicum EA 2018]
          Length = 279

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P   L L     SV+ L+  L           ++  FD+     V+ FQ+ H L P 
Sbjct: 2   PTFP--TLRLYYEGPSVRILQMNLYGLNYRYNGLKVTGVFDSLTYEVVRDFQVEHKLVPD 59

Query: 155 GMVDSSTLEAM 165
           G+V   T   +
Sbjct: 60  GIVGPITWSVL 70



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            F      AV  FQ  +GL  +G+VD  T + +
Sbjct: 94  IFGPVTIDAVTRFQSVNGLVKNGVVDPRTRQQL 126


>gi|126173395|ref|YP_001049544.1| peptidoglycan binding domain-containing protein [Shewanella baltica
           OS155]
 gi|125996600|gb|ABN60675.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS155]
          Length = 557

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             FD  +E+ +K FQ +HGL   G+  + TL  +N
Sbjct: 506 NQFDVQLENDLKSFQSQHGLKADGIAGNQTLVRLN 540


>gi|332706811|ref|ZP_08426872.1| N-acetylmuramoyl-L-alanine amidase [Lyngbya majuscula 3L]
 gi|332354695|gb|EGJ34174.1| N-acetylmuramoyl-L-alanine amidase [Lyngbya majuscula 3L]
          Length = 306

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 26/131 (19%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQ-TEKAIAFYQDIL--------SRGGWPELP--- 98
                L R+ +   +  P++   ++ Q T  AI  +Q I+            W  +    
Sbjct: 184 ELQKALNRLKIKSPAGKPLVENGSLDQATIAAIKTFQAIVGINQTGIGDSTTWKTINQIL 243

Query: 99  ----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
               +RP H G    +V+ L+ R                F +   SAV  FQ + GL   
Sbjct: 244 EQPILRPNHAG--GTTVKYLQRR--------VGTQADGIFGSGTASAVIRFQKQQGLTAD 293

Query: 155 GMVDSSTLEAM 165
           G+V + T   +
Sbjct: 294 GIVGAQTWSQL 304


>gi|168239119|ref|ZP_02664177.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194734349|ref|YP_002114220.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|204930801|ref|ZP_03221674.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|194709851|gb|ACF89072.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197288095|gb|EDY27482.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|204320260|gb|EDZ05464.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|322616591|gb|EFY13500.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619894|gb|EFY16768.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622462|gb|EFY19307.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322629420|gb|EFY26197.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322633908|gb|EFY30646.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322636839|gb|EFY33542.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641361|gb|EFY38000.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322645126|gb|EFY41655.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652290|gb|EFY48646.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322655641|gb|EFY51943.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322660946|gb|EFY57176.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322665468|gb|EFY61656.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322667555|gb|EFY63716.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673651|gb|EFY69753.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322677577|gb|EFY73641.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322679758|gb|EFY75797.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322687231|gb|EFY83203.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323194017|gb|EFZ79218.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323199426|gb|EFZ84519.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202442|gb|EFZ87484.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208845|gb|EFZ93783.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323210653|gb|EFZ95532.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323217819|gb|EGA02534.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323229622|gb|EGA13745.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323232847|gb|EGA16943.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240117|gb|EGA24161.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242896|gb|EGA26917.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323246811|gb|EGA30781.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323254289|gb|EGA38106.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323261592|gb|EGA45169.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323266984|gb|EGA50469.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272088|gb|EGA55502.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|145297589|ref|YP_001140430.1| general secretion pathway protein A [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850361|gb|ABO88682.1| general secretion pathway protein A [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 547

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           L         FDA +++ ++ FQ   GL+P G+  S+TL  +NV
Sbjct: 466 LQQPDRKVRRFDAELKNKLQQFQREQGLNPDGIAGSNTLLRLNV 509


>gi|160874352|ref|YP_001553668.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS195]
 gi|160859874|gb|ABX48408.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS195]
 gi|315266587|gb|ADT93440.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS678]
          Length = 557

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 20/35 (57%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             FD  +E+ +K FQ +HGL   G+  + TL  +N
Sbjct: 506 NQFDVQLENDLKSFQSQHGLKADGIAGNQTLVRLN 540


>gi|290962512|ref|YP_003493694.1| hypothetical protein SCAB_82141 [Streptomyces scabiei 87.22]
 gi|260652038|emb|CBG75170.1| putative membrane protein [Streptomyces scabiei 87.22]
          Length = 299

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVDS 159
           L LG+    V  L+ RL   G  +        +D  V+SAV+ +Q+   L     G+   
Sbjct: 227 LGLGDRGAEVTELQLRLNEVGFYNGDADGE--YDREVQSAVRGYQLTRVLLEDESGVYGE 284

Query: 160 STLEAM 165
           +T  ++
Sbjct: 285 ATRASL 290


>gi|146295638|ref|YP_001179409.1| carboxyl-terminal protease [Caldicellulosiruptor saccharolyticus
           DSM 8903]
 gi|145409214|gb|ABP66218.1| carboxyl-terminal protease [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 472

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +    G+  + V   ++RL     L      +   D    +A+K FQ  + L  +G++D
Sbjct: 381 TKKYKKGDMDLEVLAAQQRLYYLRYLS---SWTGKMDDATVNAIKKFQKDNKLSLNGVLD 437

Query: 159 SSTLEAMN 166
            +T + +N
Sbjct: 438 ITTQKKLN 445


>gi|290954841|ref|YP_003486023.1| peptidoglycan-binding surface protein [Streptomyces scabiei 87.22]
 gi|260644367|emb|CBG67452.1| putative peptidoglycan-binding surface protein [Streptomyces
           scabiei 87.22]
          Length = 275

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             KG+  +F    ++AV+ FQ   GL+  G+V   T   +  P
Sbjct: 231 DPKGIDASFGPNTKAAVQRFQRSRGLEDDGIVGPMTWRELRKP 273


>gi|73662628|ref|YP_301409.1| carboxy-terminal processing protease [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|94709230|sp|Q49XN1|CTPAL_STAS1 RecName: Full=Probable CtpA-like serine protease
 gi|72495143|dbj|BAE18464.1| carboxy-terminal processing protease [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 491

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   LG+   +V+ ++  L + G        S  FD+ +E A+K FQ ++ LD +G  + 
Sbjct: 405 KTYQLGDDDKNVKTMKVGLNVLGY--HINNHSTEFDSELEDALKSFQKKNNLDVNGTFNK 462

Query: 160 ST 161
           ST
Sbjct: 463 ST 464


>gi|311030560|ref|ZP_07708650.1| hypothetical protein Bm3-1_08466 [Bacillus sp. m3-13]
          Length = 352

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           +  G +   V  L+ RL  +G       +   +      AVK FQ   GLD   G+V   
Sbjct: 34  IQKGATGNDVVELQARLQYNGYYH--ARIDGVYGWSTYWAVKNFQQEFGLDHVDGLVGPK 91

Query: 161 TLEAM 165
           T E +
Sbjct: 92  TKEML 96


>gi|168264276|ref|ZP_02686249.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|205347257|gb|EDZ33888.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|168244286|ref|ZP_02669218.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|194444973|ref|YP_002040469.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450628|ref|YP_002045214.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194403636|gb|ACF63858.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194408932|gb|ACF69151.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|205336782|gb|EDZ23546.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|168233093|ref|ZP_02658151.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|194472579|ref|ZP_03078563.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|198243629|ref|YP_002215923.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205353051|ref|YP_002226852.1| hypothetical protein SG1906 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857278|ref|YP_002243929.1| hypothetical protein SEN1834 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|194458943|gb|EDX47782.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|197938145|gb|ACH75478.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|205272832|emb|CAR37758.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205332648|gb|EDZ19412.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|206709081|emb|CAR33414.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326623671|gb|EGE30016.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326628130|gb|EGE34473.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|161503692|ref|YP_001570804.1| hypothetical protein SARI_01776 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865039|gb|ABX21662.1| hypothetical protein SARI_01776 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 319

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|62179735|ref|YP_216152.1| hypothetical protein SC1165 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161614556|ref|YP_001588521.1| hypothetical protein SPAB_02305 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553626|ref|ZP_02347374.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|62127368|gb|AAX65071.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161363920|gb|ABX67688.1| hypothetical protein SPAB_02305 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|205321976|gb|EDZ09815.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|322714205|gb|EFZ05776.1| Peptidoglycan-binding LysM [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|302333033|gb|ADL23226.1| serine protease [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 496

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        +  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNETTQFDQALENQVKAFQQTNKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|291439401|ref|ZP_06578791.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342296|gb|EFE69252.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 390

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 6/76 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L  R     +     + L+  L+  G    + G    F    + AV  FQ R+ L  
Sbjct: 235 WPLLRKRT---EDQYTRGRALQHLLMAHGYEVKADGF---FGDETQDAVMDFQRRNHLPS 288

Query: 154 SGMVDSSTLEAMNVPV 169
            G V   T  A+  PV
Sbjct: 289 DGKVGKDTWPALVKPV 304



 Score = 43.3 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L ++P+  G    +V  L+E L  +G       +S  F A     ++ FQ  H L P
Sbjct: 297 WPAL-VKPVGPGADEHTVLALQELLHNTG--QGGTEVSGEFTAATAEDLRFFQRGHDLPP 353

Query: 154 SGMVDSSTLEAM 165
           +G  D  T  A+
Sbjct: 354 TGRADVDTWLAL 365


>gi|295318214|gb|ADF98591.1| glycosyl hydrolase, family 25/peptidoglycan binding domain protein
           [Clostridium botulinum F str. 230613]
          Length = 307

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T
Sbjct: 249 KQGARGGITKVIQQMLISIGYPVGSHGADGVFGDSTVTAIKAFQKDCHLVADGIVGKET 307


>gi|153940604|ref|YP_001390124.1| glycosy hydrolase family protein [Clostridium botulinum F str.
           Langeland]
 gi|152936500|gb|ABS41998.1| glycosyl hydrolase, family 25/peptidoglycan binding domain protein
           [Clostridium botulinum F str. Langeland]
          Length = 309

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T
Sbjct: 251 KQGARGGITKVIQQMLISIGYPVGSHGADGVFGDSTVTAIKAFQKDCHLVADGIVGKET 309


>gi|16764570|ref|NP_460185.1| periplasmic protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167992001|ref|ZP_02573100.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168822318|ref|ZP_02834318.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|197251546|ref|YP_002146827.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197261709|ref|ZP_03161783.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|238910965|ref|ZP_04654802.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|16419733|gb|AAL20144.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|197215249|gb|ACH52646.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197239964|gb|EDY22584.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|205329693|gb|EDZ16457.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205341233|gb|EDZ27997.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|261246427|emb|CBG24236.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992991|gb|ACY87876.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157756|emb|CBW17248.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912203|dbj|BAJ36177.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321223831|gb|EFX48894.1| L,D-transpeptidase YcfS [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323129484|gb|ADX16914.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332988106|gb|AEF07089.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 321

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|260892380|ref|YP_003238477.1| ErfK/YbiS/YcfS/YnhG family protein [Ammonifex degensii KC4]
 gi|260864521|gb|ACX51627.1| ErfK/YbiS/YcfS/YnhG family protein [Ammonifex degensii KC4]
          Length = 206

 Score = 49.4 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V  ++  L   G       +S  FDA  + AV+ FQ  H L   G VD 
Sbjct: 141 RVLREGDCGSDVMEVQRVLRRQGFYSG--PISGRFDAQTKEAVRRFQQHHRLPSLGEVDE 198

Query: 160 STLEAM 165
            T E +
Sbjct: 199 KTYELL 204


>gi|239931029|ref|ZP_04687982.1| Peptidoglycan-binding domain 1 protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 370

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 6/76 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L  R     +     + L+  L+  G    + G    F    + AV  FQ R+ L  
Sbjct: 215 WPLLRKRT---EDQYTRGRALQHLLMAHGYEVKADGF---FGDETQDAVMDFQRRNHLPS 268

Query: 154 SGMVDSSTLEAMNVPV 169
            G V   T  A+  PV
Sbjct: 269 DGKVGKDTWPALVKPV 284



 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L ++P+  G    +V  L+E L  +G       +S  F A     ++ FQ  H L P
Sbjct: 277 WPAL-VKPVGPGADEHTVLALQELLHNTG--QGGTEVSGEFTAATAEDLRFFQRGHDLPP 333

Query: 154 SGMVDSSTLEAM 165
           +G  D  T  A+
Sbjct: 334 TGRADVDTWLAL 345


>gi|254478173|ref|ZP_05091555.1| C-terminal processing peptidase subfamily, putative
           [Carboxydibrachium pacificum DSM 12653]
 gi|214035902|gb|EEB76594.1| C-terminal processing peptidase subfamily, putative
           [Carboxydibrachium pacificum DSM 12653]
          Length = 470

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 61/180 (33%), Gaps = 35/180 (19%)

Query: 3   GYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG 62
            YL   K      V         ++   I  + +  ++ E+ +                 
Sbjct: 285 SYLTKPKYKLAVLVNKGTASAAEILAGAIQDTKVGFLVGENTYG-------------KGT 331

Query: 63  IDSDIPIISKETIAQTEKAIAFY-----QDILSRGGWPELPIR------------PLHLG 105
           + S +P+        T   IA Y     + I   G  P++ ++             L +G
Sbjct: 332 VQSVVPLQDGSGFKLT---IARYKLPSGRYIGKEGLTPDVYVKNVQYTADIKFAGELKIG 388

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +    V+ L++ L +      +      F     +AVK  Q + GL P+G+ D +T  A+
Sbjct: 389 SRGNEVKILQKYLNLLKF--NAGPEDGIFGPKTANAVKELQKKAGLSPTGVFDKNTYNAL 446


>gi|197122202|ref|YP_002134153.1| peptidoglycan-binding protein [Anaeromyxobacter sp. K]
 gi|196172051|gb|ACG73024.1| Peptidoglycan-binding domain 1 protein [Anaeromyxobacter sp. K]
          Length = 136

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 91  RGGWPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           RG  P +P  P   L  G        LR+R    G L   +   +  D    +A++ FQ 
Sbjct: 47  RGERPRVPSSPEALLAPGAVGEIQDALRDR----GYLGAHRRGEL--DRATSAALRRFQE 100

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDL 171
             GL  +G  D  TL  ++V    
Sbjct: 101 AQGLAATGAPDRETLRRLHVDPAR 124


>gi|20808900|ref|NP_624071.1| spore cortex-lytic enzyme prepeptide [Thermoanaerobacter
           tengcongensis MB4]
 gi|20517559|gb|AAM25675.1| spore cortex-lytic enzyme prepeptide [Thermoanaerobacter
           tengcongensis MB4]
          Length = 234

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+   V +++ RL   G  D    +   F      AV+ FQ  +GL  +G+VD  T  A
Sbjct: 40  GNTGSDVAKVQARLKAWGYYDG--PVDGFFGVKTWLAVRKFQAYNGLAVTGIVDDDTKVA 97

Query: 165 M 165
           +
Sbjct: 98  L 98


>gi|313896346|ref|ZP_07829899.1| NlpC/P60 family protein [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320529278|ref|ZP_08030368.1| NlpC/P60 family protein [Selenomonas artemidis F0399]
 gi|312975145|gb|EFR40607.1| NlpC/P60 family protein [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320138452|gb|EFW30344.1| NlpC/P60 family protein [Selenomonas artemidis F0399]
          Length = 246

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L++ L  +G     K  +  FD   E AV  FQ    +  +G+V+++
Sbjct: 27  TLREGSHGHEVLVLQQALQNAGY--KIKNANGVFDKDTERAVAEFQRDSKIKITGVVNNA 84

Query: 161 TLEAMNVPVDLR 172
           T  A+      R
Sbjct: 85  TWRALKDAPATR 96


>gi|294629109|ref|ZP_06707669.1| peptidodoglycan-binding membrane protein [Streptomyces sp. e14]
 gi|292832442|gb|EFF90791.1| peptidodoglycan-binding membrane protein [Streptomyces sp. e14]
          Length = 184

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 90  SRGGWPELPIR---PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           +  G P  P R    L  G+    V  L+ RL        +  ++  +D  VE +V+++Q
Sbjct: 102 ATTGKPSAPARLGPVLQRGDHGPEVAELQSRLAEL--YLYTGPVNGDYDRRVEDSVRVYQ 159

Query: 147 MRHGLDPS--GMVDSSTLEAM 165
              G      G+   +T  ++
Sbjct: 160 WSRGTTSDGLGVYGPATRASL 180


>gi|187779103|ref|ZP_02995576.1| hypothetical protein CLOSPO_02698 [Clostridium sporogenes ATCC
           15579]
 gi|187772728|gb|EDU36530.1| hypothetical protein CLOSPO_02698 [Clostridium sporogenes ATCC
           15579]
          Length = 308

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F    E+AVK  Q    L   G+V   T 
Sbjct: 241 KKGAKGGITKAIQKMLINIGYPVGSSGADGVFGDGTETAVKAVQKDCNLSVDGIVGKETW 300

Query: 163 EAM 165
           +A+
Sbjct: 301 KAL 303


>gi|172057401|ref|YP_001813861.1| peptidoglycan binding domain-containing protein [Exiguobacterium
           sibiricum 255-15]
 gi|171989922|gb|ACB60844.1| Peptidoglycan-binding domain 1 protein [Exiguobacterium sibiricum
           255-15]
          Length = 220

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 36/134 (26%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW------------------------ 94
            D G  ++ P      + +   A+  YQ +   G W                        
Sbjct: 91  ADGGKRAEFPAPPDPRLKRIVAAMKRYQ-MQWGGDWGSFPDYPHFQLYDAVNGQTKPLLG 149

Query: 95  PELPIRPLHLG---NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P  P +PL+ G        ++ +++RL +         L+  FD  +   +K FQ +H L
Sbjct: 150 PRYPGQPLYAGAERMDRTLIRLIQKRLRL--------PLTGRFDQKLTQRIKQFQRQHRL 201

Query: 152 DPSGMVDSSTLEAM 165
              G++   T   +
Sbjct: 202 AVDGIIGPVTWRHL 215


>gi|323228042|gb|EGA12183.1| hypothetical protein SEEM0055_19941 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
          Length = 248

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|225452582|ref|XP_002275556.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 315

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           H G+    + +L++ L   G L        +      FD  VESA+K +Q  + L+ +G 
Sbjct: 50  HKGDKVEGIHKLKKYLGQFGYLSYSHSKYHTHANDDDFDDLVESAIKTYQTNYHLNATGS 109

Query: 157 VDSSTLEAMNVP 168
           +DS T+  M  P
Sbjct: 110 LDSETVSQMVKP 121


>gi|159028466|emb|CAO89913.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 170

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 44/147 (29%), Gaps = 52/147 (35%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +   ++ KV  +  V VG+   +TP     +  ++ NP W  P +              
Sbjct: 54  KVYVYQDSKVLAQFAVAVGKKGWETPTGKFEVRELVRNPVWKSPWT-------------- 99

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNT 321
                         GK                      PG  + +    I F    +N+ 
Sbjct: 100 --------------GKVS-------------------APGPNSPLGERWIGFWSDGKNSI 126

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRN 348
             H TP         R  + GCVR+RN
Sbjct: 127 GFHGTPAENSLG---RAASHGCVRMRN 150


>gi|200389840|ref|ZP_03216451.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|199602285|gb|EDZ00831.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
          Length = 321

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|291550276|emb|CBL26538.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
           [Ruminococcus torques L2-14]
          Length = 483

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTP 229
            Q  G  Y+ V+IPA  +  V NG V L + V+ G    +R+TP
Sbjct: 348 AQDWGTTYLEVDIPAQHMWYVVNGAVQLETDVVTGLPTPERETP 391


>gi|319400781|gb|EFV89000.1| C-terminal processing peptidase family protein [Staphylococcus
           epidermidis FRI909]
          Length = 491

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G        +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 405 KTYHQGEKDKNVKTMKIGLKALGY--QIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 462

Query: 160 ST 161
            T
Sbjct: 463 KT 464


>gi|326779611|ref|ZP_08238876.1| Peptidoglycan-binding domain 1 protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|326659944|gb|EGE44790.1| Peptidoglycan-binding domain 1 protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 399

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GM 156
             L  G+    V  L+ RL   G+ L        ++   V  +V ++Q    +     G+
Sbjct: 318 SSLRPGDRGPEVAELQTRLRTVGEWLYSGPVDGSSYSDQVAHSVAIYQSYKAIQGDPIGV 377

Query: 157 VDSSTLEAM 165
              +T  A+
Sbjct: 378 YGPNTRRAL 386


>gi|242242707|ref|ZP_04797152.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           W23144]
 gi|242233843|gb|EES36155.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           W23144]
          Length = 491

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G        +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 405 KTYHQGEKDKNVKTMKIGLKALGY--QIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 462

Query: 160 ST 161
            T
Sbjct: 463 KT 464


>gi|168003279|ref|XP_001754340.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694442|gb|EDQ80790.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 861

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 30/61 (49%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  L+  L   G L     L+  F    + A++ FQ+  G+  +G+  SS+ +A
Sbjct: 423 GDSGPQVLDLQRALYWYGFLPKRTELTAYFGPGTKRALQQFQIAQGVPGTGVWGSSSRQA 482

Query: 165 M 165
           +
Sbjct: 483 L 483


>gi|145300422|ref|YP_001143263.1| peptidoglycan-binding LysM [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853194|gb|ABO91515.1| peptidoglycan-binding LysM [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 308

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 57/205 (27%), Gaps = 49/205 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++N+    L     GK  +    + +G++   TP    + + R    P W  
Sbjct: 95  PDAPREGIVLNVAEMRLYYYPKGKKVVEVLPIGIGQLGTDTPENWVTSVQRKKAGPTWT- 153

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                        +   +Y                             +       G  N
Sbjct: 154 ----------PTAKMHAEYAAR------------------------GESLPAVWPAGPDN 179

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            M    +          H T     F   +R  + GCVR+RN  +   +L K  P  +R 
Sbjct: 180 PMGLFALYIGKMYAI--HGTNAQ--FGIGLR-VSHGCVRLRN--EDIEYLFKQIPVGTRV 232

Query: 367 H-----IEEVVKTRKTTPVKLATEV 386
                 I+  V+      +++   +
Sbjct: 233 QFVNQPIKATVEPDGRRYLEVHQPL 257


>gi|81299458|ref|YP_399666.1| hypothetical protein Synpcc7942_0647 [Synechococcus elongatus PCC
           7942]
 gi|81168339|gb|ABB56679.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 180

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 36/147 (24%), Gaps = 52/147 (35%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +    +        V +G+   +TP    R+   + NP W  P                
Sbjct: 64  RVTVYRDRLAIASYPVGIGKPGWETPRGTFRVMSKIVNPTWQHPW--------------- 108

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--TKIEFYSRNNT 321
                         G  V                    PG  N +           +N+ 
Sbjct: 109 -------------NGSLV-------------------PPGPNNPLGDRWIGFWTDGKNSI 136

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRN 348
             H T    L        + GCVR++N
Sbjct: 137 GFHGTTAESLIGQ---AVSHGCVRMKN 160


>gi|23308683|ref|NP_694423.1| matrix metalloproteinase-21 precursor [Mus musculus]
 gi|50401063|sp|Q8K3F2|MMP21_MOUSE RecName: Full=Matrix metalloproteinase-21; Short=MMP-21; Flags:
           Precursor
 gi|22252944|gb|AAM94032.1| matrix metalloproteinase-21 [Mus musculus]
 gi|22854900|gb|AAN09805.1| matrix metalloproteinase 21 [Mus musculus]
 gi|76827853|gb|AAI06862.1| Matrix metallopeptidase 21 [Mus musculus]
 gi|148685821|gb|EDL17768.1| matrix metallopeptidase 21 [Mus musculus]
          Length = 568

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 45/135 (33%), Gaps = 34/135 (25%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              +    + +      D       P+   + IA    A    Q  L + GW E+P    
Sbjct: 15  WLVAPQPTQPERLFHSRDRSDLEPSPLSQAKPIADLHDA----QSFLLKYGWSEIPSPK- 69

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                                   S G+ V F   +  AV+ FQ  + L  SG +DS TL
Sbjct: 70  -----------------------ESAGVPVGF--TLAQAVRRFQKANRLPASGELDSPTL 104

Query: 163 EAMNVP----VDLRI 173
            AMN P     D R+
Sbjct: 105 AAMNKPRCGVPDTRL 119


>gi|295703232|ref|YP_003596307.1| putative peptidoglycan binding domain-containing protein [Bacillus
           megaterium DSM 319]
 gi|294800891|gb|ADF37957.1| putative peptidoglycan binding domain protein [Bacillus megaterium
           DSM 319]
          Length = 139

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 9/75 (12%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            +  L  G++   V+ +++ L +             F    E AVK FQ++ G    G+V
Sbjct: 65  SVAALGKGSAGEEVKTVQKSLGL--------NPDGYFGLETEQAVKEFQVKQGYTADGVV 116

Query: 158 DSSTLEAM-NVPVDL 171
              T +A+ N   D 
Sbjct: 117 GPQTWDALVNTSKDT 131


>gi|121996923|ref|YP_001001710.1| ErfK/YbiS/YcfS/YnhG family protein [Halorhodospira halophila SL1]
 gi|121588328|gb|ABM60908.1| ErfK/YbiS/YcfS/YnhG family protein [Halorhodospira halophila SL1]
          Length = 355

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 43/166 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        V++N+    L    E+  V     V +GR+D  TP+  + +   + +P
Sbjct: 128 RYILP-DAPREGVVINLAEMRLYHYPEDENVVEVFPVSIGRMDWSTPLGRTEVTGKIQDP 186

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P SI ++                      E+  E    EV               P
Sbjct: 187 AWYPPESIRKQ---------------------AEQRGETMPREV--------------PP 211

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
           G  N +    I      + Y +H T  P      +R  T GC+R+ 
Sbjct: 212 GPDNPLGRHAILL--DISGYLLHGTNRPW--GIGMRA-THGCIRLH 252


>gi|323222137|gb|EGA06522.1| hypothetical protein SEEM0047_13609 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
          Length = 247

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 151 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|218130611|ref|ZP_03459415.1| hypothetical protein BACEGG_02200 [Bacteroides eggerthii DSM 20697]
 gi|217986955|gb|EEC53286.1| hypothetical protein BACEGG_02200 [Bacteroides eggerthii DSM 20697]
          Length = 298

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPS----KGLSVAFDAYVESAVKLFQMRHGL 151
            +  R L  G     V  L   L  +  ++ S    K     +DA + SAVK FQ   GL
Sbjct: 130 SIGDRTLKTGIHGSDVTSLTGYLATALYINRSWIKEKEGYSLYDATIASAVKHFQKDAGL 189

Query: 152 DPSGMVDSSTLEAM 165
             +G+ D +T+  +
Sbjct: 190 PQTGIADQTTINKL 203



 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 6/71 (8%)

Query: 106 NSSVSVQRLRERLIISGDLDP------SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +    V  L   L  +G          +      F   + +AV+ FQ  + L  +G  D 
Sbjct: 228 DKGTDVTELVNLLTKAGFAPDPKKIVMTNDGRTEFTKDIATAVRFFQAYNNLSVTGRADE 287

Query: 160 STLEAMNVPVD 170
           +T++A+     
Sbjct: 288 ATIKALKTKAQ 298


>gi|332799121|ref|YP_004460620.1| cell wall hydrolase SleB [Tepidanaerobacter sp. Re1]
 gi|332696856|gb|AEE91313.1| cell wall hydrolase SleB [Tepidanaerobacter sp. Re1]
          Length = 228

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 25/77 (32%), Gaps = 2/77 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +L  R L  G     V +L++ L   G                  A+  FQ   GL   G
Sbjct: 27  QLGDRVLTKGCRGQDVAQLQQVLNNKGFWSGYADG--ILGNKTVDALVKFQKAKGLKADG 84

Query: 156 MVDSSTLEAMNVPVDLR 172
           +    T  A+ V    R
Sbjct: 85  IAGFETFSALGVDTSYR 101


>gi|298492059|ref|YP_003722236.1| peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
 gi|298233977|gb|ADI65113.1| Peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
          Length = 182

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 59/135 (43%), Gaps = 10/135 (7%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIA------FYQDILSR-G 92
           I        + R +  ++ + +  D  +  I +E ++Q    +A        Q +L+R  
Sbjct: 51  ITPPEFMKTDGREEANISTLAIKRDKVLAQIKQEYLSQISDKLADVHNIPTKQQLLTRYP 110

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            + +  +  L  G++ +SV+ ++  L+ +G       +   F    E+A+K FQ +H L 
Sbjct: 111 AYGQQAMPTLLFGSAGMSVRIMQRLLVSNGY---GVRVDGIFGPLTEAAIKAFQNQHNLF 167

Query: 153 PSGMVDSSTLEAMNV 167
             G+V   T   +++
Sbjct: 168 VDGIVGQKTWWELSI 182


>gi|114320738|ref|YP_742421.1| ErfK/YbiS/YcfS/YnhG family protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114227132|gb|ABI56931.1| ErfK/YbiS/YcfS/YnhG family protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 329

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 46/158 (29%), Gaps = 47/158 (29%)

Query: 196 VLVNIPAASLEAVE-----NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           V+VN+    L           +      V VGR+D +TP+  + I     +P W  P SI
Sbjct: 104 VVVNVAEMRLYYYRPVTAGERRRVETYPVSVGRMDWETPVGRTEITAKAEDPSWYPPESI 163

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
                        +Y +                        +         PG  N +  
Sbjct: 164 ------------REYARRE----------------------QGKELPRVVPPGPDNPLGR 189

Query: 311 --TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              ++          H T  P      V   TSGC+R+
Sbjct: 190 HALRLGIP-GYLI--HGTNRPWGIGMRV---TSGCIRM 221


>gi|147807819|emb|CAN73128.1| hypothetical protein VITISV_030256 [Vitis vinifera]
          Length = 305

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           H G+    + +L++ L   G L        +      FD  VESA+K +Q  + L+ +G 
Sbjct: 50  HKGDKVEGIHKLKKYLGQFGYLSYSHSKYHTHANDDDFDDLVESAIKTYQTNYHLNATGS 109

Query: 157 VDSSTLEAMNVP 168
           +DS T+  M  P
Sbjct: 110 LDSETVSQMVKP 121


>gi|29829926|ref|NP_824560.1| lipoprotein [Streptomyces avermitilis MA-4680]
 gi|29607036|dbj|BAC71095.1| putative lipoprotein [Streptomyces avermitilis MA-4680]
          Length = 285

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P + L   G+   +V+ L+ RL     L    G +  +D    +AV+ FQ + GL  +G 
Sbjct: 75  PAKVLWSAGDKGTAVRELQARLRQVAWL--FDGPTGTYDDLTVTAVRGFQGKRGLPRTGE 132

Query: 157 VDSSTLEAMNVPV--DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            D+ T + +        +     +          + M  R + ++  + +L  + +GK  
Sbjct: 133 TDAVTWQRLVRMTHEPTKWELYALGGQPAAAPDPRCMTGRALCISKTSRTLRWMIDGKTV 192

Query: 215 LRSTVIVGRVDRQT 228
               V  G     T
Sbjct: 193 STMAVRFGAQYTPT 206


>gi|291004107|ref|ZP_06562080.1| putative muramoyl-pentapeptide carboxypeptidase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 245

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLF 145
            +   W     R L  G+S   V+ L+ R+         K    +   F    ++AV  F
Sbjct: 32  AAAYDW----SRELREGHSGADVRELQIRVAGWAADSAQKTHVAVDGQFGPGTKAAVVRF 87

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q  +GL  SG+VDS+T + +N
Sbjct: 88  QKAYGLAGSGVVDSATQQKLN 108


>gi|134102502|ref|YP_001108163.1| putative muramoyl-pentapeptide carboxypeptidase [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915125|emb|CAM05238.1| putative muramoyl-pentapeptide carboxypeptidase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 243

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLF 145
            +   W     R L  G+S   V+ L+ R+         K    +   F    ++AV  F
Sbjct: 30  AAAYDW----SRELREGHSGADVRELQIRVAGWAADSAQKTHVAVDGQFGPGTKAAVVRF 85

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q  +GL  SG+VDS+T + +N
Sbjct: 86  QKAYGLAGSGVVDSATQQKLN 106


>gi|296329447|ref|ZP_06871934.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674771|ref|YP_003866443.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296153329|gb|EFG94191.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413015|gb|ADM38134.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 466

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 14/111 (12%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            Q +  +  Y  +      P L   +    G+S  +V+  ++ L   G       ++  +
Sbjct: 359 PQVKAELPDYAKL------PYLDADKTYKSGDSGTNVKVAQKMLKALGY---KVKVNSTY 409

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR----QLQVNLM 181
           D    S VK FQ +  L  +G++   T   +   +  ++     Q++  + 
Sbjct: 410 DQDFVSVVKQFQKKEKLKETGVLTGDTTTKLMTELQKKLSNNDTQMEKAIE 460


>gi|258511360|ref|YP_003184794.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478086|gb|ACV58405.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 300

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 18/101 (17%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
              +    + AV  F+  HGL   G         +         ++ + L      L   
Sbjct: 124 PDQYTEITKGAVMRFEADHGLRVDGYTGPRVRRTL---------EIALAL-----HLTAT 169

Query: 191 MGLRYVLVN--IPAASLEAVENGK-VGLRSTVIVGRVDRQT 228
              R V+V+  IP   L   E+G+ V  ++    G     T
Sbjct: 170 QPYRLVMVDQSIP-QQLRVWEDGRGVIFQTACSTGVPAAPT 209


>gi|297192509|ref|ZP_06909907.1| lipoprotein [Streptomyces pristinaespiralis ATCC 25486]
 gi|197718051|gb|EDY61959.1| lipoprotein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 282

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 64/185 (34%), Gaps = 6/185 (3%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISK-ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGN 106
             D              +  P  S   + +++E A    +   S       P   +  G 
Sbjct: 21  ATDAPSAGTPSAAPATSASTPPASPTPSASESETAEPSKKPSPSPSTQKPAPKVLMAPGA 80

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM- 165
               V+ L+ RL   G  D     +  +     +AVK FQ + GL  +G  D+ T + + 
Sbjct: 81  KGEQVRELQARLAQIGWFD--DKPTGTYGPVTTTAVKGFQGKRGLLATGSTDTVTWDRLL 138

Query: 166 -NVPVDLRIRQLQVNLMRIK-KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
                  R      ++ + + KL  + M  R + ++    +L  + +GKV     V  G 
Sbjct: 139 GMTTKPTRAELDGKDVKKPQAKLDPRCMTGRVMCISKTTRTLSWMIDGKVLSTMDVRFGS 198

Query: 224 VDRQT 228
               T
Sbjct: 199 QYTPT 203


>gi|313900439|ref|ZP_07833932.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
 gi|312954501|gb|EFR36176.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
          Length = 356

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 6/77 (7%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMR 148
           G W     + L  G+  + VQ+L+  L IIS      PS  +   F   ++ AV+ +Q  
Sbjct: 274 GLW---TGKVLRQGDVGIEVQQLQYFLSIISESYPSIPSVTVDSRFGPGLDRAVRAYQRE 330

Query: 149 HGLDPSGMVDSSTLEAM 165
            GL   G+V   T  ++
Sbjct: 331 FGLAVDGLVGRYTWNSI 347



 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 87  DILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYV 138
             L    W    P  P   L L +S   V  ++E L        ++         F    
Sbjct: 163 QFLETDNWQPYTPSYPGYALRLESSGQPVFIIQELLNGIAVNYPNIPLIYPPDAVFGPQT 222

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ESAV+ FQ +  L   G+V  ST   +
Sbjct: 223 ESAVRAFQRQFDLTVDGIVGQSTWYQI 249


>gi|328880762|emb|CCA54001.1| hypothetical protein SVEN_0714 [Streptomyces venezuelae ATCC 10712]
          Length = 130

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQM 147
           S  GW  +P R    G++ V V+ L+  +     +DP+    +   F    +  +K FQ 
Sbjct: 48  SANGW-LIPARNFQYGSTGVCVRELQSDVASIMGIDPADWPFVDGVFGTKTDDYIKEFQR 106

Query: 148 RHGLDPSGMVDSSTLEAM 165
           +H L   G+V  +T EA+
Sbjct: 107 QHHLIVDGVVGPNTWEAL 124


>gi|320011044|gb|ADW05894.1| Peptidoglycan-binding domain 1 protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 329

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLI-ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           E+    L  G+S   V  L+ RL  I     P  G    + A VE AV  +Q    +   
Sbjct: 249 EVSGATLRRGDSGAEVAELQRRLQEIWVYRGPDNGD---YSAQVEQAVAEYQRWVSVRND 305

Query: 155 --GMVDSSTLEAM 165
             G+    T  A+
Sbjct: 306 PPGVYGPETRSAL 318


>gi|162449468|ref|YP_001611835.1| hypothetical protein sce1198 [Sorangium cellulosum 'So ce 56']
 gi|161160050|emb|CAN91355.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 241

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 5/69 (7%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +  R L+    S  V  ++ RL   G     +   +  DA   +A+K FQ  H L+ +G 
Sbjct: 170 IAPRTLNP---SRDVDGIQARLANLGYYSGPRHGEL--DAATIAALKRFQSDHDLEATGK 224

Query: 157 VDSSTLEAM 165
            D +T  A+
Sbjct: 225 PDEATASAL 233


>gi|315145030|gb|EFT89046.1| peptidase [Enterococcus faecalis TX2141]
          Length = 480

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +   L      +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAYLVDENNAN--YTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|182438957|ref|YP_001826676.1| putative peptidodoglycan-binding membrane protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178467473|dbj|BAG21993.1| putative peptidodoglycan-binding membrane protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 431

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GM 156
             L  G+    V  L+ RL   G+ L        ++   V  +V ++Q    +     G+
Sbjct: 350 SSLRPGDRGPEVAELQTRLRTVGEWLYSGPVDGSSYSDQVAHSVAIYQSYKAIQGDPIGV 409

Query: 157 VDSSTLEAM 165
              +T  A+
Sbjct: 410 YGPNTRRAL 418


>gi|117619176|ref|YP_858054.1| LysM domain-containing protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560583|gb|ABK37531.1| LysM domain protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 344

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 57/205 (27%), Gaps = 49/205 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++N+    L     GK  +    + +G++   TP    + + R    P W  
Sbjct: 131 PDAPREGIVLNVAEMRLYYYPKGKKVVEVLPIGIGQLGTDTPENWVTSVQRKKAGPTWT- 189

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                        +   +Y                             +       G  N
Sbjct: 190 ----------PTAKMHAEYAAR------------------------GESLPAVWPAGPDN 215

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            M    +          H T     F   +R  + GCVR+RN  D   +L K  P  +R 
Sbjct: 216 PMGLFALYIGKMYAI--HGTNAQ--FGIGLR-VSHGCVRLRN--DDIEYLFKKVPVGTRV 268

Query: 367 H-----IEEVVKTRKTTPVKLATEV 386
                 I+  V+      +++   +
Sbjct: 269 QFVNQPIKASVEPDGRRYLEVHQPL 293


>gi|111224313|ref|YP_715107.1| hypothetical protein FRAAL4924 [Frankia alni ACN14a]
 gi|111151845|emb|CAJ63565.1| hypothetical protein; Putative peptidoglycan binding domain
           [Frankia alni ACN14a]
          Length = 200

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            VQ+++++L   G      G    F       VK +Q++HGL   G+V   T  ++ +
Sbjct: 146 DVQQIQQKLANLGYPIQVDG---QFGYQTNHMVKDYQLKHGLLVDGVVGPQTRASLGI 200


>gi|319650587|ref|ZP_08004727.1| carboxyl-terminal processing protease [Bacillus sp. 2_A_57_CT2]
 gi|317397768|gb|EFV78466.1| carboxyl-terminal processing protease [Bacillus sp. 2_A_57_CT2]
          Length = 474

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +PL +  ++  V+  +E L   G           F+    +AVK FQ +  L+ SG +D 
Sbjct: 385 KPLAIDMNNEMVKNAQEILAGLGYAPG--RTDGYFNDSTAAAVKAFQKQKELEASGRIDK 442

Query: 160 STLEAM 165
            T  A+
Sbjct: 443 KTAAAL 448


>gi|291447220|ref|ZP_06586610.1| lipoprotein [Streptomyces roseosporus NRRL 15998]
 gi|291350167|gb|EFE77071.1| lipoprotein [Streptomyces roseosporus NRRL 15998]
          Length = 295

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 8/131 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+ S  V+ L+ RL   G     +  +  + +    AV+ FQ +  L  +G  D  T
Sbjct: 90  MRTGSESDRVRELQARLRQIGHF--GRTPTGYYGSVTADAVRSFQAKRSLPVTGSTDEVT 147

Query: 162 ---LEAMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRS 217
              L AM         +L+    R     +++ +  R + ++  + +L  + +GKV    
Sbjct: 148 WQRLRAMTRVPT--AAELRPPTERPVAAPDERCLKGRVLCISKNSRTLAWMIDGKVVSAM 205

Query: 218 TVIVGRVDRQT 228
            V  G     T
Sbjct: 206 DVRFGSDYTPT 216


>gi|323438436|gb|EGA96190.1| carboxy-terminal processing proteinase [Staphylococcus aureus O11]
 gi|323444074|gb|EGB01685.1| carboxy-terminal processing proteinase [Staphylococcus aureus O46]
          Length = 496

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        +  FD  +E+ +K FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNETTQFDQALENQIKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|163853780|ref|YP_001641823.1| peptidoglycan binding domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163665385|gb|ABY32752.1| Peptidoglycan-binding domain 1 protein [Methylobacterium extorquens
           PA1]
          Length = 233

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 19/55 (34%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V  ++  L+  G      G          +AV  FQ   GL   G+    T  A+
Sbjct: 4   VADIQRALLARGYDLGKAGADGDAGPRTIAAVTAFQRSAGLVADGIAGPKTQAAL 58


>gi|239990210|ref|ZP_04710874.1| hypothetical protein SrosN1_23088 [Streptomyces roseosporus NRRL
           11379]
          Length = 350

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 8/131 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+ S  V+ L+ RL   G     +  +  + +    AV+ FQ +  L  +G  D  T
Sbjct: 145 MRTGSESDRVRELQARLRQIGHF--GRTPTGYYGSVTADAVRSFQAKRSLPVTGSTDEVT 202

Query: 162 ---LEAMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRS 217
              L AM         +L+    R     +++ +  R + ++  + +L  + +GKV    
Sbjct: 203 WQRLRAMTRVPT--AAELRPPTERPVAAPDERCLKGRVLCISKNSRTLAWMIDGKVVSAM 260

Query: 218 TVIVGRVDRQT 228
            V  G     T
Sbjct: 261 DVRFGSDYTPT 271


>gi|331271040|ref|YP_004385751.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
           BKT015925]
 gi|329127432|gb|AEB77376.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
           BKT015925]
          Length = 304

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V++L+  L   G    +      F    ++AV  FQ  + L   G+V
Sbjct: 168 SSGLLKIGSKEDKVKQLQANLNKLGYTCGNADG--IFGQETKNAVISFQRNNELSADGIV 225

Query: 158 DSSTLEAMNVPVDLR 172
             ST   +   ++ R
Sbjct: 226 GQSTWNKILSNLEDR 240


>gi|253573587|ref|ZP_04850930.1| spore cortex-lytic enzyme [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251847115|gb|EES75120.1| spore cortex-lytic enzyme [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 277

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 22/67 (32%), Gaps = 2/67 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + +  G     V  L+ RL   G       L   F      A+K FQ   G+   
Sbjct: 42  PAFSEQVIDYGAYGKDVYELQGRLAYLGFYHG--KLDSYFGPKTLGALKWFQSEFGMKVD 99

Query: 155 GMVDSST 161
           G+    T
Sbjct: 100 GLAGPKT 106


>gi|126729787|ref|ZP_01745600.1| hypothetical protein SSE37_04915 [Sagittula stellata E-37]
 gi|126709906|gb|EBA08959.1| hypothetical protein SSE37_04915 [Sagittula stellata E-37]
          Length = 335

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L+E L         +     FD    +A+  FQ  +GL    +  + T
Sbjct: 175 LRFGDRGADVRVLQEDLAGLRYFAGRRDG--RFDTLTRAALLAFQADNGLATDAVAGALT 232

Query: 162 LEAMNVPVDLRIRQLQ 177
             A+       +R + 
Sbjct: 233 WAALARAQPRPLRDIA 248


>gi|172056176|ref|YP_001812636.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Exiguobacterium sibiricum 255-15]
 gi|171988697|gb|ACB59619.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Exiguobacterium sibiricum 255-15]
          Length = 210

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             ++  FDA     V+ +Q R GL   G+V  +T   M
Sbjct: 172 ATVTKRFDAETAEKVRAYQKRQGLTVDGVVGPATWNRM 209


>gi|315287491|gb|EFU46902.1| LysM domain protein [Escherichia coli MS 110-3]
          Length = 307

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|325912856|ref|ZP_08175234.1| peptidase, S41 family [Lactobacillus iners UPII 60-B]
 gi|325477849|gb|EGC80983.1| peptidase, S41 family [Lactobacillus iners UPII 60-B]
          Length = 460

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  S  L+  +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYL--SNNLTGVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAM 165
             A+
Sbjct: 434 RYAL 437


>gi|312873993|ref|ZP_07734029.1| peptidase, S41 family [Lactobacillus iners LEAF 2052A-d]
 gi|311090542|gb|EFQ48950.1| peptidase, S41 family [Lactobacillus iners LEAF 2052A-d]
          Length = 460

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  S  L+  +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYL--SNNLTGVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAM 165
             A+
Sbjct: 434 RYAL 437


>gi|312875468|ref|ZP_07735471.1| peptidase, S41 family [Lactobacillus iners LEAF 2053A-b]
 gi|311088979|gb|EFQ47420.1| peptidase, S41 family [Lactobacillus iners LEAF 2053A-b]
          Length = 460

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  S  L+  +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYL--SNNLTGVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAM 165
             A+
Sbjct: 434 RYAL 437


>gi|309804179|ref|ZP_07698257.1| peptidase, S41 family [Lactobacillus iners LactinV 11V1-d]
 gi|309809279|ref|ZP_07703148.1| peptidase, S41 family [Lactobacillus iners SPIN 2503V10-D]
 gi|329921343|ref|ZP_08277781.1| peptidase, S41 family [Lactobacillus iners SPIN 1401G]
 gi|308163762|gb|EFO66031.1| peptidase, S41 family [Lactobacillus iners LactinV 11V1-d]
 gi|308170392|gb|EFO72416.1| peptidase, S41 family [Lactobacillus iners SPIN 2503V10-D]
 gi|328934635|gb|EGG31139.1| peptidase, S41 family [Lactobacillus iners SPIN 1401G]
          Length = 460

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  S  L+  +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYL--SNNLTGVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAM 165
             A+
Sbjct: 434 RYAL 437


>gi|259500647|ref|ZP_05743549.1| carboxy-terminal processing protease CtpA [Lactobacillus iners DSM
           13335]
 gi|302191336|ref|ZP_07267590.1| hypothetical protein LineA_04932 [Lactobacillus iners AB-1]
 gi|259168031|gb|EEW52526.1| carboxy-terminal processing protease CtpA [Lactobacillus iners DSM
           13335]
          Length = 460

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  S  L+  +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYL--SNNLTGVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAM 165
             A+
Sbjct: 434 RYAL 437


>gi|256395379|ref|YP_003116943.1| NLP/P60 protein [Catenulispora acidiphila DSM 44928]
 gi|256361605|gb|ACU75102.1| NLP/P60 protein [Catenulispora acidiphila DSM 44928]
          Length = 285

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G  S  V  L++ L   G       +   F     +AVK +Q  H L   G+V   T
Sbjct: 50  ISYGQKSGCVTELQQLLNKHG---AHLAVDGDFGPATRAAVKSYQSSHKLSVDGIVGPKT 106

Query: 162 LEAMNV 167
             +++ 
Sbjct: 107 KASLDG 112


>gi|20808962|ref|NP_624133.1| periplasmic protease [Thermoanaerobacter tengcongensis MB4]
 gi|20517627|gb|AAM25737.1| Periplasmic protease [Thermoanaerobacter tengcongensis MB4]
          Length = 453

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 61/180 (33%), Gaps = 35/180 (19%)

Query: 3   GYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG 62
            YL   K      V         ++   I  + +  ++ E+ +                 
Sbjct: 268 SYLTKPKYKLAVLVNKGTASAAEILAGAIQDTKVGFLVGENTYG-------------KGT 314

Query: 63  IDSDIPIISKETIAQTEKAIAFY-----QDILSRGGWPELPIR------------PLHLG 105
           + S +P+        T   IA Y     + I   G  P++ ++             L +G
Sbjct: 315 VQSVVPLEDGSGFKLT---IARYKLPSGRYIGKEGLTPDVYVKNVQYTADIKFGGELKIG 371

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +    V+ L++ L +      +      F     +AVK  Q + GL P+G+ D +T  A+
Sbjct: 372 SRGNEVKILQKYLNLLKF--NAGPEDGIFGPKTANAVKELQKKAGLSPTGVFDKNTYNAL 429


>gi|308232610|ref|ZP_07416616.2| hydrolase [Mycobacterium tuberculosis SUMu001]
 gi|308371501|ref|ZP_07425158.2| hydrolase [Mycobacterium tuberculosis SUMu003]
 gi|308371550|ref|ZP_07425287.2| hydrolase [Mycobacterium tuberculosis SUMu004]
 gi|308375032|ref|ZP_07442437.2| hydrolase [Mycobacterium tuberculosis SUMu007]
 gi|308376280|ref|ZP_07438228.2| hydrolase [Mycobacterium tuberculosis SUMu008]
 gi|308378515|ref|ZP_07482827.2| hydrolase [Mycobacterium tuberculosis SUMu009]
 gi|308379665|ref|ZP_07487059.2| hydrolase [Mycobacterium tuberculosis SUMu010]
 gi|308380864|ref|ZP_07491276.2| hydrolase [Mycobacterium tuberculosis SUMu011]
 gi|308213429|gb|EFO72828.1| hydrolase [Mycobacterium tuberculosis SUMu001]
 gi|308328608|gb|EFP17459.1| hydrolase [Mycobacterium tuberculosis SUMu003]
 gi|308336263|gb|EFP25114.1| hydrolase [Mycobacterium tuberculosis SUMu004]
 gi|308347665|gb|EFP36516.1| hydrolase [Mycobacterium tuberculosis SUMu007]
 gi|308351583|gb|EFP40434.1| hydrolase [Mycobacterium tuberculosis SUMu008]
 gi|308352290|gb|EFP41141.1| hydrolase [Mycobacterium tuberculosis SUMu009]
 gi|308356293|gb|EFP45144.1| hydrolase [Mycobacterium tuberculosis SUMu010]
 gi|308360180|gb|EFP49031.1| hydrolase [Mycobacterium tuberculosis SUMu011]
          Length = 324

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              V  L+ RL   G       +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 23  GDDVATLQARLQDLGFYTG--LVDGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 78


>gi|302519494|ref|ZP_07271836.1| lipoprotein [Streptomyces sp. SPB78]
 gi|318081632|ref|ZP_07988946.1| hypothetical protein SSA3_34132 [Streptomyces sp. SA3_actF]
 gi|302428389|gb|EFL00205.1| lipoprotein [Streptomyces sp. SPB78]
          Length = 196

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 14/123 (11%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM--NVPVD 170
            L+ RL   G        +  F      A+  FQ   GL  SG++D++T   +    P  
Sbjct: 3   ALQARLWSLGFFRQQP--TGFFGDVTAQALAAFQRDRGLGASGVLDAATWARLRAAGPAP 60

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVL-----VNIPAASLEAVENGKVGLRSTVIVGRVD 225
            +       L     L   +   R +      V+  + +L  + +G+V     V  G   
Sbjct: 61  TKA-----ALYPETTLPPTRPDPRCLTGRALCVSKKSRTLAWMVDGRVVSVMDVRFGSAY 115

Query: 226 RQT 228
             T
Sbjct: 116 TPT 118


>gi|326804586|ref|YP_004327457.1| phage-encoded peptidoglycan binding protein [Salmonella phage Vi01]
 gi|301795236|emb|CBW37954.1| phage-encoded peptidoglycan binding protein [Salmonella phage Vi01]
          Length = 264

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LGN    V+ L++ L   G    S      F    E+AVK  Q   GL   G+    T
Sbjct: 4   LKLGNRGSEVKSLQQSLNKIGF---SLVADGIFGKATENAVKSVQAGAGLVIDGIAGPKT 60

Query: 162 LEAM 165
             A+
Sbjct: 61  FYAI 64


>gi|260425195|ref|ZP_05734487.2| ErfK/YbiS/YcfS/YnhG family protein [Dialister invisus DSM 15470]
 gi|260404459|gb|EEW98006.1| ErfK/YbiS/YcfS/YnhG family protein [Dialister invisus DSM 15470]
          Length = 351

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 66/229 (28%), Gaps = 80/229 (34%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + +N+ +  L   E  +      V VG  +  +P+    I+    NP W  P++   K  
Sbjct: 59  ITLNLASRLLTLYEGTEKVRIYPVAVGAPETPSPVGEFSISEKEVNPVWTDPKT---KTT 115

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
           +                                              G  N +    +  
Sbjct: 116 VP--------------------------------------------SGPSNPLGYRWLGL 131

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
           Y       H T  P    ++ R  + GC+R+                     +EE+ ++ 
Sbjct: 132 YGNYGI--HGTNAPW---SIGRSVSHGCIRMY-----------------EEDVEELFES- 168

Query: 376 KTTPVKLATEVPVHFVYISAWSPK--DSIIQF--RDDIYGLDNVHVGII 420
               V + T  PV  +Y      +  D  + +    D YG + + V  +
Sbjct: 169 ----VPMGT--PVEIIYDRVIMEEAPDHTVSYYIYPDGYGWEPLTVSSV 211


>gi|320664513|gb|EFX31664.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. LSU-61]
          Length = 319

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|315653518|ref|ZP_07906439.1| carboxy-terminal processing protease CtpA [Lactobacillus iners ATCC
           55195]
 gi|315489209|gb|EFU78850.1| carboxy-terminal processing protease CtpA [Lactobacillus iners ATCC
           55195]
          Length = 460

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  S  L+  +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYL--SNNLTGVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAM 165
             A+
Sbjct: 434 RYAL 437


>gi|239943759|ref|ZP_04695696.1| hypothetical protein SrosN15_22371 [Streptomyces roseosporus NRRL
           15998]
          Length = 321

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 8/131 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+ S  V+ L+ RL   G     +  +  + +    AV+ FQ +  L  +G  D  T
Sbjct: 116 MRTGSESDRVRELQARLRQIGHF--GRTPTGYYGSVTADAVRSFQAKRSLPVTGSTDEVT 173

Query: 162 ---LEAMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRS 217
              L AM         +L+    R     +++ +  R + ++  + +L  + +GKV    
Sbjct: 174 WQRLRAMTRVPT--AAELRPPTERPVAAPDERCLKGRVLCISKNSRTLAWMIDGKVVSAM 231

Query: 218 TVIVGRVDRQT 228
            V  G     T
Sbjct: 232 DVRFGSDYTPT 242


>gi|149911553|ref|ZP_01900167.1| hypothetical protein PE36_11747 [Moritella sp. PE36]
 gi|149805398|gb|EDM65408.1| hypothetical protein PE36_11747 [Moritella sp. PE36]
          Length = 287

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 41/173 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L   +  + +++N+P   L    +N        V +GR  R+TP ++S +   + +P W
Sbjct: 74  MLLPDVEHKGIVINLPELRLYYFPKNSNKVHVFPVGIGREGRETPQMNSFVKTKLKDPVW 133

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
               +  + +          YL    + +                          Q  GK
Sbjct: 134 TPTPT-TRAE----------YLDKYKMVLP----------------------RIVQ-AGK 159

Query: 305 INAMASTKIEF-YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
            N + S  ++  Y + N  +H T     F   +R  ++GC+R+ N  D+  WL
Sbjct: 160 HNPLGSFALQLAYGKRNYLIHGTNTD--FGIGMR-ISAGCIRM-NPDDI-EWL 207


>gi|319892421|ref|YP_004149296.1| Probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317162117|gb|ADV05660.1| Probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus pseudintermedius HKU10-03]
          Length = 509

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 13/92 (14%)

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           A Y++I        +P +   H G     V+ ++  L   G       +   ++A +  A
Sbjct: 410 ADYENI------SVIPTKTTYHQGQEDKHVKSIKIGLKALGY--DVGTIDEHYNAQLTIA 461

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           VK FQ ++ L  +GM +  T    N     R+
Sbjct: 462 VKQFQQKNDLTANGMFNKET----NGVFTERL 489


>gi|261339562|ref|ZP_05967420.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cancerogenus ATCC
           35316]
 gi|288318379|gb|EFC57317.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cancerogenus ATCC
           35316]
          Length = 337

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     G+  +    + +G++  +TP+  +R+++ + NP W
Sbjct: 89  MLLPDTPREGIVVNLAELRLYYFPPGENRVEVYPLGIGQLGLETPVSTTRVSQKIPNPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I  + +               I +                             G 
Sbjct: 149 TPTAGIRARSL------------AQGIKL-----------------------PPVVPAGP 173

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   N+V    +SGC+R+       ++
Sbjct: 174 NNPLGRFALRLGIGNGEYLIHGTSAP---NSVGLRVSSGCMRMNAPDIKALF 222


>gi|218528353|ref|YP_002419169.1| peptidoglycan-binding protein [Methylobacterium chloromethanicum
           CM4]
 gi|218520656|gb|ACK81241.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           chloromethanicum CM4]
          Length = 232

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 111 VQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V  ++  L+  G DL PS     A      +AV  FQ   GL   G+    T  A+
Sbjct: 3   VAEIQRALLARGYDLGPSGADGDA-GPRTIAAVTAFQYSAGLVADGIAGPRTQAAL 57


>gi|325836775|ref|ZP_08166242.1| peptidase, S41 family [Turicibacter sp. HGF1]
 gi|325491153|gb|EGC93442.1| peptidase, S41 family [Turicibacter sp. HGF1]
          Length = 475

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 15/104 (14%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           +YQ  L+ G       + L       S+   +  L   G           +D    SAV+
Sbjct: 376 YYQVYLTDG-------KSLEYDMVDSSIANAQNILTALGY--QVGRHDGYYDKSTVSAVE 426

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR------QLQVNLM 181
            FQ  + +  +G++D+ T   + + +  ++R      QLQ  L 
Sbjct: 427 NFQADNEILVTGIIDNKTASELTLALRNKVRDKQYDTQLQTALE 470


>gi|325911993|ref|ZP_08174395.1| peptidase, S41 family [Lactobacillus iners UPII 143-D]
 gi|325476178|gb|EGC79342.1| peptidase, S41 family [Lactobacillus iners UPII 143-D]
          Length = 460

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  S  L+  +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYL--SNNLTGVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAM 165
             A+
Sbjct: 434 RYAL 437


>gi|293375596|ref|ZP_06621870.1| peptidase, S41 family [Turicibacter sanguinis PC909]
 gi|292645813|gb|EFF63849.1| peptidase, S41 family [Turicibacter sanguinis PC909]
          Length = 475

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 15/104 (14%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           +YQ  L+ G       + L       S+   +  L   G           +D    SAV+
Sbjct: 376 YYQVYLTDG-------KSLEYDMVDSSIANAQNILTALGY--QVGRHDGYYDKSTVSAVE 426

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR------QLQVNLM 181
            FQ  + +  +G++D+ T   + + +  ++R      QLQ  L 
Sbjct: 427 NFQADNEILVTGIIDNKTASELTLALRNKVRDKQYDTQLQTALE 470


>gi|326391572|ref|ZP_08213103.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325992402|gb|EGD50863.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 229

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 95  PELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P  P  P+   G+ +V V   ++ L  +G L  +  +   F    ++AV  FQ  H L P
Sbjct: 155 PGSPYYPIVQYGSQNVYVATCQDALYYNGYLTLTD-IDGIFGDITKNAVIKFQKDHNLTP 213

Query: 154 SGMVDSSTLEAM 165
            G+V S T  A+
Sbjct: 214 DGIVGSQTWSAL 225


>gi|290968167|ref|ZP_06559712.1| ErfK/YbiS/YcfS/YnhG [Megasphaera genomosp. type_1 str. 28L]
 gi|290781842|gb|EFD94425.1| ErfK/YbiS/YcfS/YnhG [Megasphaera genomosp. type_1 str. 28L]
          Length = 340

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 43/154 (27%), Gaps = 51/154 (33%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             + +N+ +  L   ENG+      V VG     TP     I     NP W         
Sbjct: 43  TRIAINLASRILTLYENGQKAAIYAVGVGTRRTPTPTGRFVIQNKAVNPTW--------- 93

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                  P N   R  PG  N +    +
Sbjct: 94  -------------------------------------VNPQNTQMRIGPGPNNPVGKRWM 116

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
            FY       H T  P    +V ++ + GCVR++
Sbjct: 117 GFYGSYGI--HGTNHP---ESVGKYVSHGCVRMK 145


>gi|295398972|ref|ZP_06808954.1| spore cortex-lytic enzyme [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312110421|ref|YP_003988737.1| spore cortex-lytic enzyme [Geobacillus sp. Y4.1MC1]
 gi|294978438|gb|EFG54034.1| spore cortex-lytic enzyme [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311215522|gb|ADP74126.1| spore cortex-lytic enzyme [Geobacillus sp. Y4.1MC1]
          Length = 275

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 89  LSRGGWPELPIRP-----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           L+ GG P   ++      +  G     V  L+ RL   G  +    +   F      AV+
Sbjct: 22  LAIGGKPAEEVKAFSNQVIQRGAVGDDVIELQARLQYIGFYNG--KIDGVFGWRTYWAVR 79

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            FQ  +GL   G+V  ST   +
Sbjct: 80  NFQYEYGLPVDGLVGESTKAKL 101


>gi|302874407|ref|YP_003843040.1| SpoIID/LytB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307690988|ref|ZP_07633434.1| SpoIID/LytB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302577264|gb|ADL51276.1| SpoIID/LytB domain protein [Clostridium cellulovorans 743B]
          Length = 856

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +   P+  G     V  ++  L   G       +   + +   SAV  FQ    L  +G 
Sbjct: 775 VSTLPISYGMRGTDVATIQSGLTTLGYSPGV--IDGIYGSKTYSAVINFQKSVSLKATGS 832

Query: 157 VDSSTLEAMN 166
           VD +T  AMN
Sbjct: 833 VDVTTFNAMN 842


>gi|309807519|ref|ZP_07701476.1| peptidase, S41 family [Lactobacillus iners LactinV 01V1-a]
 gi|308169246|gb|EFO71307.1| peptidase, S41 family [Lactobacillus iners LactinV 01V1-a]
          Length = 431

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  S  L+  +D    ++VK+FQ  + L  +G+V+   
Sbjct: 347 LKYNMMGLDIAILQKYLMALGYL--SNNLTGVYDNATLNSVKMFQKDNNLKVTGIVNKDI 404

Query: 162 LEAM 165
             A+
Sbjct: 405 RYAL 408


>gi|309805739|ref|ZP_07699779.1| peptidase, S41 family [Lactobacillus iners LactinV 09V1-c]
 gi|308164992|gb|EFO67235.1| peptidase, S41 family [Lactobacillus iners LactinV 09V1-c]
          Length = 399

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  S  L+  +D    ++VK+FQ  + L  +G+V+   
Sbjct: 315 LKYNMMGLDIAILQKYLMALGYL--SNNLTGVYDNATLNSVKMFQKDNNLKVTGIVNKDI 372

Query: 162 LEAM 165
             A+
Sbjct: 373 RYAL 376


>gi|295696385|ref|YP_003589623.1| spore cortex-lytic enzyme [Bacillus tusciae DSM 2912]
 gi|295411987|gb|ADG06479.1| spore cortex-lytic enzyme [Bacillus tusciae DSM 2912]
          Length = 241

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W  +  + L  G     V  L++RL   G    +  +   F      +V+ FQ  HGL  
Sbjct: 32  W-AMSDKTLMKGGRGEDVYELQDRLKFLGLYRGA--IDGVFGWNTYWSVRSFQSGHGLSA 88

Query: 154 SGMVDSSTLEAM 165
           +G VD  T  A+
Sbjct: 89  TGQVDDRTRRAL 100


>gi|329571926|gb|EGG53604.1| peptidase, S41 family [Enterococcus faecalis TX1467]
          Length = 484

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|315162340|gb|EFU06357.1| peptidase [Enterococcus faecalis TX0645]
          Length = 477

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|312971249|ref|ZP_07785427.1| lysM domain protein [Escherichia coli 1827-70]
 gi|310336451|gb|EFQ01637.1| lysM domain protein [Escherichia coli 1827-70]
          Length = 377

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 149 LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 207

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 208 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 232

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 233 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 279


>gi|309806746|ref|ZP_07700740.1| peptidase, S41 family [Lactobacillus iners LactinV 03V1-b]
 gi|308166861|gb|EFO69046.1| peptidase, S41 family [Lactobacillus iners LactinV 03V1-b]
          Length = 431

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  S  L+  +D    ++VK+FQ  + L  +G+V+   
Sbjct: 347 LKYNMMGLDIAILQKYLMALGYL--SNNLTGVYDNATLNSVKMFQKDNNLKVTGIVNKDI 404

Query: 162 LEAM 165
             A+
Sbjct: 405 RYAL 408


>gi|295113069|emb|CBL31706.1| C-terminal peptidase (prc) [Enterococcus sp. 7L76]
          Length = 477

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|294781608|ref|ZP_06746944.1| peptidase, S41 family [Enterococcus faecalis PC1.1]
 gi|294451304|gb|EFG19770.1| peptidase, S41 family [Enterococcus faecalis PC1.1]
          Length = 477

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|289665239|ref|ZP_06486820.1| hypothetical protein XcampvN_19755 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 212

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +L + L + G           F A  + AV+ FQ  HGL   G+V   T  A+
Sbjct: 7   QLAQ-LGVVGRDGKPLHADGDFGANTKYAVEQFQREHGLHVDGVVGRQTQAAL 58


>gi|257419406|ref|ZP_05596400.1| predicted protein [Enterococcus faecalis T11]
 gi|257161234|gb|EEU91194.1| predicted protein [Enterococcus faecalis T11]
          Length = 480

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|257416201|ref|ZP_05593195.1| carboxyl-terminal protease [Enterococcus faecalis AR01/DG]
 gi|257158029|gb|EEU87989.1| carboxyl-terminal protease [Enterococcus faecalis ARO1/DG]
          Length = 480

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|257086967|ref|ZP_05581328.1| carboxyl-terminal protease [Enterococcus faecalis D6]
 gi|256994997|gb|EEU82299.1| carboxyl-terminal protease [Enterococcus faecalis D6]
 gi|315027837|gb|EFT39769.1| peptidase [Enterococcus faecalis TX2137]
 gi|315172408|gb|EFU16425.1| peptidase [Enterococcus faecalis TX1346]
          Length = 480

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|257085074|ref|ZP_05579435.1| carboxyl-terminal protease [Enterococcus faecalis Fly1]
 gi|256993104|gb|EEU80406.1| carboxyl-terminal protease [Enterococcus faecalis Fly1]
          Length = 477

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|256959090|ref|ZP_05563261.1| carboxyl-terminal protease [Enterococcus faecalis DS5]
 gi|257079121|ref|ZP_05573482.1| carboxyl-terminal protease [Enterococcus faecalis JH1]
 gi|307269492|ref|ZP_07550831.1| peptidase [Enterococcus faecalis TX4248]
 gi|256949586|gb|EEU66218.1| carboxyl-terminal protease [Enterococcus faecalis DS5]
 gi|256987151|gb|EEU74453.1| carboxyl-terminal protease [Enterococcus faecalis JH1]
 gi|306514112|gb|EFM82688.1| peptidase [Enterococcus faecalis TX4248]
 gi|315037093|gb|EFT49025.1| peptidase [Enterococcus faecalis TX0027]
 gi|315147375|gb|EFT91391.1| peptidase [Enterococcus faecalis TX4244]
 gi|327535245|gb|AEA94079.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis
           OG1RF]
          Length = 480

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|256762610|ref|ZP_05503190.1| carboxyl-terminal protease [Enterococcus faecalis T3]
 gi|257422502|ref|ZP_05599492.1| carboxyl-terminal protease [Enterococcus faecalis X98]
 gi|256683861|gb|EEU23556.1| carboxyl-terminal protease [Enterococcus faecalis T3]
 gi|257164326|gb|EEU94286.1| carboxyl-terminal protease [Enterococcus faecalis X98]
 gi|315156169|gb|EFU00186.1| peptidase [Enterococcus faecalis TX0043]
          Length = 480

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|255972683|ref|ZP_05423269.1| predicted protein [Enterococcus faecalis T1]
 gi|255963701|gb|EET96177.1| predicted protein [Enterococcus faecalis T1]
          Length = 480

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|229549899|ref|ZP_04438624.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis ATCC
           29200]
 gi|256961817|ref|ZP_05565988.1| carboxyl-terminal protease [Enterococcus faecalis Merz96]
 gi|293389633|ref|ZP_06634088.1| carboxyl- protease [Enterococcus faecalis S613]
 gi|307289219|ref|ZP_07569175.1| peptidase [Enterococcus faecalis TX0109]
 gi|312907649|ref|ZP_07766640.1| peptidase [Enterococcus faecalis DAPTO 512]
 gi|312910266|ref|ZP_07769113.1| C-terminal processing peptidase [Enterococcus faecalis DAPTO 516]
 gi|312951611|ref|ZP_07770506.1| peptidase [Enterococcus faecalis TX0102]
 gi|229304972|gb|EEN70968.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis ATCC
           29200]
 gi|256952313|gb|EEU68945.1| carboxyl-terminal protease [Enterococcus faecalis Merz96]
 gi|291081026|gb|EFE17989.1| carboxyl- protease [Enterococcus faecalis S613]
 gi|306499928|gb|EFM69289.1| peptidase [Enterococcus faecalis TX0109]
 gi|310626677|gb|EFQ09960.1| peptidase [Enterococcus faecalis DAPTO 512]
 gi|310630328|gb|EFQ13611.1| peptidase [Enterococcus faecalis TX0102]
 gi|311289539|gb|EFQ68095.1| C-terminal processing peptidase [Enterococcus faecalis DAPTO 516]
 gi|315152368|gb|EFT96384.1| peptidase [Enterococcus faecalis TX0031]
 gi|315158189|gb|EFU02206.1| peptidase [Enterococcus faecalis TX0312]
 gi|315164128|gb|EFU08145.1| peptidase [Enterococcus faecalis TX1302]
          Length = 480

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|227518870|ref|ZP_03948919.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis
           TX0104]
 gi|227073661|gb|EEI11624.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis
           TX0104]
          Length = 480

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|157159394|ref|YP_001462346.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli E24377A]
 gi|157081424|gb|ABV21132.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E24377A]
          Length = 320

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|29376233|ref|NP_815387.1| carboxyl-terminal protease [Enterococcus faecalis V583]
 gi|293382880|ref|ZP_06628798.1| carboxyl- protease [Enterococcus faecalis R712]
 gi|29343696|gb|AAO81457.1| carboxyl-terminal protease [Enterococcus faecalis V583]
 gi|291079545|gb|EFE16909.1| carboxyl- protease [Enterococcus faecalis R712]
 gi|315576110|gb|EFU88301.1| peptidase [Enterococcus faecalis TX0309B]
 gi|315580684|gb|EFU92875.1| peptidase [Enterococcus faecalis TX0309A]
 gi|323480840|gb|ADX80279.1| carboxy-terminal processing proteinase [Enterococcus faecalis 62]
          Length = 477

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|114330477|ref|YP_746699.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas eutropha C91]
 gi|114307491|gb|ABI58734.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas eutropha C91]
          Length = 323

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 76/218 (34%), Gaps = 60/218 (27%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVEN---GK--VGLRSTVIVGRVDRQTPILHSRINR 237
           ++ ++ Q      +++N+P   L        G+    +   V +GR+D  TP+  + I R
Sbjct: 91  LRFIIPQA-ERTGLVINLPEMRLYYFPKPIKGQKPEIITHPVSIGRMDWNTPLGKTTIVR 149

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
              +P W  P+S+ +K+ +                   E+G+   ++ V           
Sbjct: 150 KQKDPTWTPPQSL-RKEAI-------------------EEGRPPLLDVV----------- 178

Query: 298 FRQDPGKINAMASTKIEFYSRNNTY-------MHDTPEPILFNNVVRFETSGCVRV--RN 348
                G  N +         +   Y       +H T +P      +R  T GC+R+   +
Sbjct: 179 ---PAGPDNPLG--------KYALYLGLPGYLIHGTNKP--LGVGMR-VTHGCMRLYPED 224

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           I +L   +   TP        ++        ++L   +
Sbjct: 225 IEELFNLIPTGTPVQIVNQPIKLGWQGDLLYIELHPPL 262


>gi|301328513|ref|ZP_07221579.1| LysM domain protein [Escherichia coli MS 78-1]
 gi|300845120|gb|EFK72880.1| LysM domain protein [Escherichia coli MS 78-1]
          Length = 304

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|331646371|ref|ZP_08347474.1| putative LysM domain protein [Escherichia coli M605]
 gi|331045123|gb|EGI17250.1| putative LysM domain protein [Escherichia coli M605]
          Length = 377

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 149 LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 207

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 208 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 232

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 233 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 279


>gi|86158504|ref|YP_465289.1| peptidoglycan-binding protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775015|gb|ABC81852.1| peptidoglycan-binding protein [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 135

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 9/89 (10%)

Query: 86  QDILSRGGWPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           + +  RG  P +P  P   L  G        LR+R    G L   +   +  D    +A+
Sbjct: 41  RGVPPRGERPRVPASPEALLAPGAVGEIQDALRDR----GYLGAHRRGEL--DRATSAAL 94

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           + FQ   GL  +G  D  TL  ++V    
Sbjct: 95  RRFQEAQGLAATGAPDRETLRRLHVDPAR 123


>gi|78049967|ref|YP_366142.1| hypothetical protein XCV4411 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78038397|emb|CAJ26142.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 615

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 14/159 (8%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI-AQTEKAIAFYQ 86
             P   +    I+ E        + ++ L+ +  G      +   +   A T++A+  +Q
Sbjct: 294 ASPGRQAAQSHILKEGSSGREVRKLESNLSALGYGDSDGHALQIDQKFNASTKQAVEAFQ 353

Query: 87  DILSRGGWPELP--IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV----ES 140
                 G   +     P  L       + L+  LI  G    +    +  D Y+      
Sbjct: 354 W---ANGLTPVDGKAGPATLDAIGRQARGLQSDLIELGF-TGADSKPLRVDGYLGSGTRQ 409

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           AV  FQ  +GL  +G+ D  TL+++         Q+Q N
Sbjct: 410 AVSAFQEANGLPVTGIADRGTLDSL---ARQTAEQIQTN 445


>gi|91210268|ref|YP_540254.1| hypothetical protein UTI89_C1241 [Escherichia coli UTI89]
 gi|117623298|ref|YP_852211.1| hypothetical protein APECO1_194 [Escherichia coli APEC O1]
 gi|218557994|ref|YP_002390907.1| hypothetical protein ECS88_1127 [Escherichia coli S88]
 gi|237706901|ref|ZP_04537382.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|91071842|gb|ABE06723.1| hypothetical protein UTI89_C1241 [Escherichia coli UTI89]
 gi|115512422|gb|ABJ00497.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|218364763|emb|CAR02453.1| conserved hypothetical protein [Escherichia coli S88]
 gi|226898111|gb|EEH84370.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294490390|gb|ADE89146.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           IHE3034]
          Length = 320

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|315291029|gb|EFU50392.1| LysM domain protein [Escherichia coli MS 153-1]
          Length = 306

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|312143788|ref|YP_003995234.1| cell wall hydrolase SleB [Halanaerobium sp. 'sapolanicus']
 gi|311904439|gb|ADQ14880.1| cell wall hydrolase SleB [Halanaerobium sp. 'sapolanicus']
          Length = 229

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  GN  + V  L+++L      + S  L   +      AVK FQ  + L   G+
Sbjct: 36  SRALSRGNEGLDVAVLQQKLKQLNYYNSS--LDGLYGDATVEAVKGFQRDNDLKADGV 91


>gi|110641289|ref|YP_669019.1| hypothetical protein ECP_1105 [Escherichia coli 536]
 gi|191173052|ref|ZP_03034585.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           F11]
 gi|300982405|ref|ZP_07176103.1| LysM domain protein [Escherichia coli MS 200-1]
 gi|306814037|ref|ZP_07448210.1| hypothetical protein ECNC101_18404 [Escherichia coli NC101]
 gi|110342881|gb|ABG69118.1| hypothetical protein YcfS precursor [Escherichia coli 536]
 gi|190906597|gb|EDV66203.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           F11]
 gi|300307242|gb|EFJ61762.1| LysM domain protein [Escherichia coli MS 200-1]
 gi|305852674|gb|EFM53122.1| hypothetical protein ECNC101_18404 [Escherichia coli NC101]
 gi|307627416|gb|ADN71720.1| hypothetical protein UM146_11755 [Escherichia coli UM146]
 gi|323953200|gb|EGB49066.1| ykud domain-containing protein [Escherichia coli H252]
 gi|323957939|gb|EGB53651.1| ykud domain-containing protein [Escherichia coli H263]
 gi|324005971|gb|EGB75190.1| LysM domain protein [Escherichia coli MS 57-2]
 gi|324013203|gb|EGB82422.1| LysM domain protein [Escherichia coli MS 60-1]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|146297696|ref|YP_001181467.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145411272|gb|ABP68276.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 234

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R +  G++   V  ++ RL   G       +   +   +E+A+ LFQ ++GL  +  +  
Sbjct: 165 RTIFPGDTGDDVMAVQRRLKELGFYHGE--VDGKYGLAMEAAINLFQKKNGLPITNKITP 222

Query: 160 STLEAM 165
             L+ M
Sbjct: 223 YLLKKM 228


>gi|291558332|emb|CBL35449.1| Cell Wall Hydrolase./Putative peptidoglycan binding domain
           [Eubacterium siraeum V10Sc8a]
          Length = 219

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 42/96 (43%), Gaps = 5/96 (5%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+    V+ +++ L   G  +    ++  F    E A+  FQ + GL  +G+ D +TL
Sbjct: 32  QKGSQGSEVEAVQQTLKDRGLFNAE--VTGYFGEKTEEAILRFQKQQGLAQTGVADEATL 89

Query: 163 EAMNVPVDLR--IRQLQVNLMRIKKLLEQKMGLRYV 196
           + + + +          +NL+  + +  +  G  Y+
Sbjct: 90  KRLGISIGSIPPATTANINLL-ARIISAEGRGEPYI 124


>gi|26247257|ref|NP_753297.1| hypothetical protein c1387 [Escherichia coli CFT073]
 gi|26107658|gb|AAN79857.1|AE016759_131 Hypothetical protein ycfS precursor [Escherichia coli CFT073]
          Length = 377

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 149 LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 207

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 208 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 232

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 233 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 279


>gi|78224173|ref|YP_385920.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
 gi|78195428|gb|ABB33195.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
          Length = 300

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 52/165 (31%), Gaps = 45/165 (27%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAV-ENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFN 241
           + ++   +    ++VN+    L  V E G    +   V  G   ++TP+   R+     N
Sbjct: 93  RHVVPAAVVPGRLVVNLSELRLYFVPEGGTPRIVSFPVGTGSEGKETPLGVYRVTEKRAN 152

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W +P SI Q+                                        P       
Sbjct: 153 PAWHVPLSIRQE---------------------------------------RPRLPAVVP 173

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           PG  N + S  +     +   +H T  P     V R  + GC+R+
Sbjct: 174 PGPDNPLGSHALRLT-DDGLMIHGTNRPW---GVGRNVSHGCIRL 214


>gi|330883919|gb|EGH18068.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 103

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        VL N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 15  RFILPPGPREGIVL-NLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 73

Query: 243 YWVIPRSIIQK 253
            W  P SI  +
Sbjct: 74  TWTPPASIKAE 84


>gi|75812752|ref|YP_320369.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75705508|gb|ABA25180.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 171

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 9/89 (10%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL---------DPSKGLSVAFDAYV 138
           IL    + +L +  L  G+   +VQ L+  L  +G L              +   F A  
Sbjct: 64  ILIATAYTDLTLPTLRQGDRGRNVQLLQRILQDNGFLGAAGVRLGNPRGAIIDGIFGAVT 123

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            SAV+  Q R+ +  +G V+ +T E +++
Sbjct: 124 VSAVRDLQRRYRIPVTGRVNPTTWEVLDM 152


>gi|303241311|ref|ZP_07327816.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
 gi|302591150|gb|EFL60893.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
          Length = 2818

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 102  LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSS 160
            L +G+    V  L++ L+  G L   KG+   +   + + AV+ +Q+R  +   G     
Sbjct: 2478 LKVGSKGEDVVILQKELVELGCLTMPKGVEYGYYGNLTQEAVRQYQIRARITVDGKAGDQ 2537

Query: 161  TLEAM 165
            T +A+
Sbjct: 2538 TWKAL 2542


>gi|315296618|gb|EFU55913.1| LysM domain protein [Escherichia coli MS 16-3]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|254161219|ref|YP_003044327.1| hypothetical protein ECB_01109 [Escherichia coli B str. REL606]
 gi|242376915|emb|CAQ31634.1| L,D-transpeptidase YcfS [Escherichia coli BL21(DE3)]
 gi|253973120|gb|ACT38791.1| hypothetical protein ECB_01109 [Escherichia coli B str. REL606]
 gi|253977334|gb|ACT43004.1| hypothetical protein ECD_01109 [Escherichia coli BL21(DE3)]
          Length = 320

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|312968808|ref|ZP_07783015.1| lysM domain protein [Escherichia coli 2362-75]
 gi|331657176|ref|ZP_08358138.1| putative LysM domain protein [Escherichia coli TA206]
 gi|222032866|emb|CAP75605.1| Uncharacterized protein ycfS [Escherichia coli LF82]
 gi|312286210|gb|EFR14123.1| lysM domain protein [Escherichia coli 2362-75]
 gi|312945675|gb|ADR26502.1| hypothetical protein NRG857_05370 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|330910929|gb|EGH39439.1| l,D-transpeptidase YcfS [Escherichia coli AA86]
 gi|331055424|gb|EGI27433.1| putative LysM domain protein [Escherichia coli TA206]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|215486324|ref|YP_002328755.1| hypothetical protein E2348C_1205 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215264396|emb|CAS08753.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|281178223|dbj|BAI54553.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 320

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|170681577|ref|YP_001744065.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli SMS-3-5]
 gi|300938684|ref|ZP_07153408.1| LysM domain protein [Escherichia coli MS 21-1]
 gi|170519295|gb|ACB17473.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           SMS-3-5]
 gi|300456329|gb|EFK19822.1| LysM domain protein [Escherichia coli MS 21-1]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|194439722|ref|ZP_03071791.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           101-1]
 gi|253773864|ref|YP_003036695.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|300928332|ref|ZP_07143867.1| LysM domain protein [Escherichia coli MS 187-1]
 gi|194421341|gb|EDX37359.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           101-1]
 gi|253324908|gb|ACT29510.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|300463664|gb|EFK27157.1| LysM domain protein [Escherichia coli MS 187-1]
 gi|323962712|gb|EGB58290.1| ykud domain-containing protein [Escherichia coli H489]
 gi|323973297|gb|EGB68486.1| ykud domain-containing protein [Escherichia coli TA007]
 gi|332342662|gb|AEE55996.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|186682808|ref|YP_001866004.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186465260|gb|ACC81061.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 223

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 10/99 (10%)

Query: 75  IAQTEKAIAFY-QDILSRGGWPELPIRPLHLG-----NSSVSVQRLRERLIISGDLDPSK 128
            A+       Y + +  +   P +  RP  +G           Q +R+     G+L    
Sbjct: 129 FARLSTGRYVYARWVADKPNNPPVTSRPGGVGGSVILTRGSRGQLVRDVQTALGNL---- 184

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +   +     + V+ FQ   GL   G V   T  A+ +
Sbjct: 185 RVDGIYGQETVNQVRSFQASKGLLVDGTVGPETRAALGI 223


>gi|118443521|ref|YP_878230.1| N-acetylmuramoyl-L-alanine amidase [Clostridium novyi NT]
 gi|118133977|gb|ABK61021.1| N-acetylmuramoyl-L-alanine amidase cwlL precursor (Cellwall
           hydrolase) (Autolysin) [Clostridium novyi NT]
          Length = 431

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G      + ++ERLI  G      G   +F +    AV   Q  + L   G+V   T  A
Sbjct: 368 GAKGNITKIIQERLIDKGYSVGKWGADGSFGSGTYDAVVKLQKDNSLSADGIVGKDTWRA 427

Query: 165 M 165
           +
Sbjct: 428 L 428


>gi|239827527|ref|YP_002950151.1| spore cortex-lytic enzyme [Geobacillus sp. WCH70]
 gi|239807820|gb|ACS24885.1| spore cortex-lytic enzyme [Geobacillus sp. WCH70]
          Length = 270

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                + +  G     V  L+ RL   G  +    +   F      AV+ FQ  +GL   
Sbjct: 29  KAFSNQVIQRGAVGDDVIELQARLQYIGFYNG--KIDGVFGWNTYWAVRNFQYEYGLPVD 86

Query: 155 GMVDSSTLEAM 165
           G+V  ST   +
Sbjct: 87  GLVGESTKAKL 97


>gi|332089283|gb|EGI94389.1| lysM domain protein [Shigella boydii 5216-82]
          Length = 213

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 45  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 103

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 104 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 128

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 129 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 175


>gi|291282133|ref|YP_003498951.1| hypothetical protein G2583_1373 [Escherichia coli O55:H7 str.
           CB9615]
 gi|209773014|gb|ACI84819.1| hypothetical protein ECs1491 [Escherichia coli]
 gi|290762006|gb|ADD55967.1| hypothetical protein G2583_1373 [Escherichia coli O55:H7 str.
           CB9615]
          Length = 320

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|74311674|ref|YP_310093.1| hypothetical protein SSON_1133 [Shigella sonnei Ss046]
 gi|73855151|gb|AAZ87858.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|323165622|gb|EFZ51409.1| lysM domain protein [Shigella sonnei 53G]
          Length = 272

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 44  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 102

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 103 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PTV 127

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 128 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 174


>gi|332092852|gb|EGI97920.1| hypothetical protein SD15574_2037 [Shigella dysenteriae 155-74]
          Length = 273

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 45  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 103

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 104 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 128

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 129 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 175


>gi|218689065|ref|YP_002397277.1| hypothetical protein ECED1_1256 [Escherichia coli ED1a]
 gi|218426629|emb|CAR07457.1| conserved hypothetical protein [Escherichia coli ED1a]
          Length = 320

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|209918369|ref|YP_002292453.1| hypothetical protein ECSE_1178 [Escherichia coli SE11]
 gi|209911628|dbj|BAG76702.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|284920938|emb|CBG34001.1| putative peptidoglycan-binding protein [Escherichia coli 042]
          Length = 321

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 93  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 151

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 152 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 223


>gi|170078936|ref|YP_001735575.1| peptidoglycan binding domain-containing protein [Synechococcus sp.
           PCC 7002]
 gi|169886605|gb|ACB00319.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7002]
          Length = 537

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +  V  L+  L  +G L  S  +   F    E+AV+ FQ  + L  +G VD  T   +  
Sbjct: 75  NDDVGYLQAFLQAAGFLPRSAVIDGIFGRTTEAAVRSFQRANKLPKTGTVDPRTWRTI-- 132

Query: 168 PVDLRIRQLQVN 179
               R +QL + 
Sbjct: 133 ---ERYQQLFLA 141



 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 58/171 (33%), Gaps = 16/171 (9%)

Query: 2   VGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDM 61
           VGYL+       F     +  G+                       V+ R    + R   
Sbjct: 78  VGYLQAFLQAAGFLPRSAVIDGIFGRTTEAAVRSFQRANKLPKTGTVDPRTWRTIERYQ- 136

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQD------ILSRG-GWPELPIRPLHLGNSSVSVQRL 114
            +    P  ++    Q  +  +F Q       +L RG G+   P +         +V  L
Sbjct: 137 QLFLASPATAEPPSEQAPEPTSFLQQDRPEKLLLRRGAGFEISPQQ--------QAVYYL 188

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++ L     +  +  L   F    E+ VK FQ+R  L   G+V  ST EA+
Sbjct: 189 QKLLQRGLFIPETAKLDGKFGRQTENGVKFFQVRQKLVADGIVGLSTWEAL 239



 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   F +  E AV+ FQM   L   G+V + T   +
Sbjct: 306 PIDGHFGSQTEQAVRRFQMIAELTIDGVVGAQTWMTL 342


>gi|82777274|ref|YP_403623.1| hypothetical protein SDY_2037 [Shigella dysenteriae Sd197]
 gi|331652165|ref|ZP_08353184.1| putative LysM domain protein [Escherichia coli M718]
 gi|81241422|gb|ABB62132.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|331050443|gb|EGI22501.1| putative LysM domain protein [Escherichia coli M718]
          Length = 320

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|320659378|gb|EFX26947.1| hypothetical protein ECO5905_20078 [Escherichia coli O55:H7 str.
           USDA 5905]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|309788185|ref|ZP_07682791.1| lysM domain protein [Shigella dysenteriae 1617]
 gi|308924037|gb|EFP69538.1| lysM domain protein [Shigella dysenteriae 1617]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|291448714|ref|ZP_06588104.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291351661|gb|EFE78565.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 503

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S  +V+RL+  L  +  L  + G+  +F    ++AV+ +Q    L   G V  +T
Sbjct: 438 LKQGGSGDAVKRLQRALTAA--LGKTVGVDGSFGPATDTAVRNYQDTRKLGVDGQVGPAT 495

Query: 162 LEAM 165
            +A+
Sbjct: 496 WKAL 499



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  ++  L           +   F +  +SAV+ FQ    LD  GMV   T  A
Sbjct: 371 GSSGPQVTAVQTLLTQQKYSPG--KVDGLFGSDTKSAVEKFQRDRSLDADGMVGPKTWTA 428

Query: 165 M 165
           +
Sbjct: 429 L 429


>gi|239945248|ref|ZP_04697185.1| putative amidase [Streptomyces roseosporus NRRL 15998]
          Length = 518

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S  +V+RL+  L  +  L  + G+  +F    ++AV+ +Q    L   G V  +T
Sbjct: 453 LKQGGSGDAVKRLQRALTAA--LGKTVGVDGSFGPATDTAVRNYQDTRKLGVDGQVGPAT 510

Query: 162 LEAM 165
            +A+
Sbjct: 511 WKAL 514



 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  ++  L           +   F +  +SAV+ FQ    LD  GMV   T  A
Sbjct: 386 GSSGPQVTAVQTLLTQQKYSPG--KVDGLFGSDTKSAVEKFQRDRSLDADGMVGPKTWTA 443

Query: 165 M 165
           +
Sbjct: 444 L 444


>gi|227886530|ref|ZP_04004335.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 83972]
 gi|300974585|ref|ZP_07172646.1| LysM domain protein [Escherichia coli MS 45-1]
 gi|301051098|ref|ZP_07197932.1| LysM domain protein [Escherichia coli MS 185-1]
 gi|227836734|gb|EEJ47200.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 83972]
 gi|300297270|gb|EFJ53655.1| LysM domain protein [Escherichia coli MS 185-1]
 gi|300410527|gb|EFJ94065.1| LysM domain protein [Escherichia coli MS 45-1]
 gi|307553114|gb|ADN45889.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           ABU 83972]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|15801230|ref|NP_287247.1| hypothetical protein Z1752 [Escherichia coli O157:H7 EDL933]
 gi|15830745|ref|NP_309518.1| hypothetical protein ECs1491 [Escherichia coli O157:H7 str. Sakai]
 gi|157160640|ref|YP_001457958.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli HS]
 gi|170080764|ref|YP_001730084.1| hypothetical protein ECDH10B_1185 [Escherichia coli str. K-12
           substr. DH10B]
 gi|188496367|ref|ZP_03003637.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           53638]
 gi|218553690|ref|YP_002386603.1| hypothetical protein ECIAI1_1150 [Escherichia coli IAI1]
 gi|218694646|ref|YP_002402313.1| hypothetical protein EC55989_1225 [Escherichia coli 55989]
 gi|238900367|ref|YP_002926163.1| hypothetical protein BWG_0961 [Escherichia coli BW2952]
 gi|254792496|ref|YP_003077333.1| hypothetical protein ECSP_1415 [Escherichia coli O157:H7 str.
           TW14359]
 gi|260843353|ref|YP_003221131.1| hypothetical protein ECO103_1158 [Escherichia coli O103:H2 str.
           12009]
 gi|260854596|ref|YP_003228487.1| hypothetical protein ECO26_1446 [Escherichia coli O26:H11 str.
           11368]
 gi|260867475|ref|YP_003233877.1| hypothetical protein ECO111_1390 [Escherichia coli O111:H- str.
           11128]
 gi|293414406|ref|ZP_06657055.1| ycfS protein [Escherichia coli B185]
 gi|293433402|ref|ZP_06661830.1| ycfS protein [Escherichia coli B088]
 gi|331641656|ref|ZP_08342791.1| putative LysM domain protein [Escherichia coli H736]
 gi|331662524|ref|ZP_08363447.1| putative LysM domain protein [Escherichia coli TA143]
 gi|331667513|ref|ZP_08368377.1| putative LysM domain protein [Escherichia coli TA271]
 gi|331672628|ref|ZP_08373417.1| putative LysM domain protein [Escherichia coli TA280]
 gi|331676905|ref|ZP_08377601.1| putative LysM domain protein [Escherichia coli H591]
 gi|331682619|ref|ZP_08383238.1| putative LysM domain protein [Escherichia coli H299]
 gi|332279699|ref|ZP_08392112.1| conserved hypothetical protein [Shigella sp. D9]
 gi|12514663|gb|AAG55859.1|AE005321_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13360955|dbj|BAB34914.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|157066320|gb|ABV05575.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           HS]
 gi|169888599|gb|ACB02306.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188491566|gb|EDU66669.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           53638]
 gi|209773008|gb|ACI84816.1| hypothetical protein ECs1491 [Escherichia coli]
 gi|209773010|gb|ACI84817.1| hypothetical protein ECs1491 [Escherichia coli]
 gi|209773012|gb|ACI84818.1| hypothetical protein ECs1491 [Escherichia coli]
 gi|209773016|gb|ACI84820.1| hypothetical protein ECs1491 [Escherichia coli]
 gi|218351378|emb|CAU97084.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218360458|emb|CAQ98012.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|238860297|gb|ACR62295.1| conserved protein [Escherichia coli BW2952]
 gi|254591896|gb|ACT71257.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|257753245|dbj|BAI24747.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257758500|dbj|BAI29997.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|257763831|dbj|BAI35326.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|291324221|gb|EFE63643.1| ycfS protein [Escherichia coli B088]
 gi|291434464|gb|EFF07437.1| ycfS protein [Escherichia coli B185]
 gi|309701384|emb|CBJ00685.1| putative peptidoglycan-binding protein [Escherichia coli ETEC
           H10407]
 gi|323937853|gb|EGB34117.1| ykud domain-containing protein [Escherichia coli E1520]
 gi|323942582|gb|EGB38749.1| ykud domain-containing protein [Escherichia coli E482]
 gi|324117316|gb|EGC11223.1| ykud domain-containing protein [Escherichia coli E1167]
 gi|331038454|gb|EGI10674.1| putative LysM domain protein [Escherichia coli H736]
 gi|331060946|gb|EGI32910.1| putative LysM domain protein [Escherichia coli TA143]
 gi|331065098|gb|EGI36993.1| putative LysM domain protein [Escherichia coli TA271]
 gi|331070271|gb|EGI41637.1| putative LysM domain protein [Escherichia coli TA280]
 gi|331075594|gb|EGI46892.1| putative LysM domain protein [Escherichia coli H591]
 gi|331080250|gb|EGI51429.1| putative LysM domain protein [Escherichia coli H299]
 gi|332102051|gb|EGJ05397.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 320

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|303240529|ref|ZP_07327045.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
            CD2]
 gi|302591931|gb|EFL61663.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
            CD2]
          Length = 1456

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 103  HLGNSSV-SVQRLRERLIISGDLDPSKGLSV-------AFDAYVESAVKLFQMRHGLDPS 154
              G+++   V  L+++L+  G L                FD   + AV+ +Q   GL   
Sbjct: 1008 QYGDNNKNDVIVLQKKLVTHGYLKMPIDQYTKTQVPFGTFDEVTKEAVEQYQSDKGLYVD 1067

Query: 155  GMVDSSTLEAMNVP 168
            G+VD  T  A+ +P
Sbjct: 1068 GVVDKDTWIALTLP 1081


>gi|227549428|ref|ZP_03979477.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium lipophiloflavum
           DSM 44291]
 gi|227078505|gb|EEI16468.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 369

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 71/185 (38%), Gaps = 27/185 (14%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----L 104
           D +D  +   +    S   ++    +A++ KA    + I+  G    + +R L      L
Sbjct: 3   DGYDGKVGEWNSRQFSHEEMLFDAHLAESLKAFQQSRGIVPTGDIDTVTLRELREASYTL 62

Query: 105 G-----------NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           G                V+RL+E+L   G    S  +   F+     A+  +Q+  GL+ 
Sbjct: 63  GARVLSFQPNQIMVGDDVRRLQEQLQELGFY--SHRVDGHFNRQTHKALVNYQINSGLEG 120

Query: 154 SGMVDSSTLEAMNVPVDLRI----RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
            G+  S+TL A+++ +  RI            R+++   +  G R V+      S+    
Sbjct: 121 DGVCGSATLHALSL-LGRRITGGSAHAIRERERVRQAGPRLSGKRVVI----DPSVHYSA 175

Query: 210 NGKVG 214
           NG   
Sbjct: 176 NGTTV 180


>gi|225453480|ref|XP_002274477.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297734565|emb|CBI16616.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKG-LSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G+    +  L++     G L    G ++  FD  +ESAV  +Q + GL  +G +DS T
Sbjct: 55  RRGSRISGMAELKKYFNRFGYLGFQDGNVTDVFDTRLESAVAAYQAKLGLPVTGRLDSET 114

Query: 162 LEAM 165
           L  M
Sbjct: 115 LSQM 118


>gi|90419802|ref|ZP_01227711.1| putative serine protease, trypsin family [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335843|gb|EAS49591.1| putative serine protease, trypsin family [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 523

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 10/56 (17%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVES----AVKLFQMRHGLDPSGMVDSSTLEAM 165
           L+ RL  +GD   +      +D  + +    A++ FQ RHG+   G++D + L  +
Sbjct: 59  LQIRLSWTGDYAGA------YDGQIAASSLRAIRDFQARHGMVADGVIDEAMLRLL 108


>gi|320653897|gb|EFX21971.1| hypothetical protein ECO7815_16598 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|291484557|dbj|BAI85632.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           natto BEST195]
          Length = 466

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 10/107 (9%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            Q +  +  Y  +      P L   +    G++  +V+  ++ L   G       ++  +
Sbjct: 359 PQVKAELPDYAKL------PYLDADKTYKSGDTGTNVKVAQKMLKALGY---KVNVNSTY 409

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           D    S VK FQ +  L  +G++   T   + + +  ++      + 
Sbjct: 410 DQDFVSVVKQFQKKEELKETGILTGDTTTKLMIELQKKLSDNDTQME 456


>gi|254562718|ref|YP_003069813.1| hypothetical protein METDI4352 [Methylobacterium extorquens DM4]
 gi|254269996|emb|CAX25982.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 232

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 19/55 (34%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V  ++  L+  G      G          +AV  FQ   GL   G+    T  A+
Sbjct: 3   VAEIQRALLARGYDLGKSGADGDAGPLTIAAVTAFQRSAGLVADGIAGPKTQAAL 57


>gi|226305739|ref|YP_002765699.1| hypothetical protein RER_22520 [Rhodococcus erythropolis PR4]
 gi|226184856|dbj|BAH32960.1| hypothetical protein RER_22520 [Rhodococcus erythropolis PR4]
          Length = 262

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 5/103 (4%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRP-----LHLGNSSVSVQRLRERLIISGDL 124
            S + +A  ++    Y  +L+    P +  +P     L  GN+   V  L+  L      
Sbjct: 159 ASAKLVAFAQRLEGGYLGLLAGTAVPPIIPKPVARPTLRRGNTGGDVTYLQGLLNRMFAS 218

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                +   F    ES V+  Q R GL   G+V S T  AM V
Sbjct: 219 YSKLVVDGDFGPATESVVREVQRRSGLAVDGIVGSDTWRAMGV 261


>gi|320197560|gb|EFW72173.1| L,D-transpeptidase YcfS [Escherichia coli WV_060327]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|320179185|gb|EFW54143.1| L,D-transpeptidase YcfS [Shigella boydii ATCC 9905]
          Length = 273

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 45  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 103

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 104 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 128

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 129 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 175


>gi|300727563|ref|ZP_07060953.1| putative peptidoglycan binding domain protein [Prevotella bryantii
           B14]
 gi|299775152|gb|EFI71754.1| putative peptidoglycan binding domain protein [Prevotella bryantii
           B14]
          Length = 274

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPS----KGLSVAFDAYVESAVKLFQMRHGL 151
            +  R L  G     V  L   L     ++ S    K     +DA + SAVK FQ   GL
Sbjct: 132 SIGDRTLKTGIHGSDVTALTGYLATGLYINHSWIKEKEGYSLYDATIASAVKHFQKDAGL 191

Query: 152 DPSGMVDSSTLEAM 165
             +G+ D +T++ +
Sbjct: 192 AQTGIADQTTIDKL 205


>gi|258652666|ref|YP_003201822.1| peptidoglycan-binding protein [Nakamurella multipartita DSM 44233]
 gi|258555891|gb|ACV78833.1| Peptidoglycan-binding domain 1 protein [Nakamurella multipartita
           DSM 44233]
          Length = 201

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 13/98 (13%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           + G WP L       G ++ +V  +R    +         +   F     +AV+ FQ RH
Sbjct: 50  AVGTWPVLSH-----GVANSAV-TVRSLQYLLNAHASCLAVDGVFGPRTTAAVRNFQARH 103

Query: 150 GLDPSGMVDSSTLEAM-------NVPVDLRIRQLQVNL 180
            L   G+V   T  A+       +V   ++  Q Q+N 
Sbjct: 104 ALVVDGIVGPQTWTALLVTIRRGSVGPAVQAFQDQMNA 141


>gi|224162231|ref|XP_002338425.1| predicted protein [Populus trichocarpa]
 gi|222872207|gb|EEF09338.1| predicted protein [Populus trichocarpa]
          Length = 304

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G +   +  L++ L   G       L +  FD  +ESA+K +Q    L+ +G++D ST
Sbjct: 47  RKGQTVEGLVELKQYLKRFGYYPSDVNLMTSDFDDLLESALKTYQNYFHLNVTGILDDST 106

Query: 162 LEAMNVP 168
           ++ M +P
Sbjct: 107 IKQMMIP 113


>gi|118488262|gb|ABK95950.1| unknown [Populus trichocarpa]
          Length = 304

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G +   +  L++ L   G       L +  FD  +ESA+K +Q    L+ +G++D ST
Sbjct: 47  RKGQTVEGLVELKQYLKRFGYYPSDVNLMTSDFDDLLESALKTYQNYFHLNVTGILDDST 106

Query: 162 LEAMNVP 168
           ++ M +P
Sbjct: 107 IKQMMIP 113


>gi|110805127|ref|YP_688647.1| hypothetical protein SFV_1133 [Shigella flexneri 5 str. 8401]
 gi|110614675|gb|ABF03342.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|281600529|gb|ADA73513.1| hypothetical protein SFxv_1270 [Shigella flexneri 2002017]
          Length = 321

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 93  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 151

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 152 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 223


>gi|170020492|ref|YP_001725446.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli ATCC 8739]
 gi|187776311|ref|ZP_02801799.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188025150|ref|ZP_02776359.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|189010664|ref|ZP_02808490.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189402503|ref|ZP_02782835.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189403583|ref|ZP_02796346.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189404503|ref|ZP_02789897.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189405395|ref|ZP_02815098.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189406283|ref|ZP_02827509.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC508]
 gi|193066279|ref|ZP_03047330.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E22]
 gi|193070913|ref|ZP_03051844.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E110019]
 gi|194429794|ref|ZP_03062308.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B171]
 gi|195938872|ref|ZP_03084254.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808997|ref|ZP_03251334.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208816343|ref|ZP_03257522.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208822587|ref|ZP_03262906.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398807|ref|YP_002269958.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|217327994|ref|ZP_03444076.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|256018631|ref|ZP_05432496.1| hypothetical protein ShiD9_06934 [Shigella sp. D9]
 gi|256023189|ref|ZP_05437054.1| hypothetical protein E4_07444 [Escherichia sp. 4_1_40B]
 gi|261256217|ref|ZP_05948750.1| hypothetical protein EscherichiacoliO157EcO_10354 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|300821106|ref|ZP_07101255.1| LysM domain protein [Escherichia coli MS 119-7]
 gi|300902507|ref|ZP_07120487.1| LysM domain protein [Escherichia coli MS 84-1]
 gi|300917884|ref|ZP_07134517.1| LysM domain protein [Escherichia coli MS 115-1]
 gi|300922642|ref|ZP_07138739.1| LysM domain protein [Escherichia coli MS 182-1]
 gi|300948703|ref|ZP_07162780.1| LysM domain protein [Escherichia coli MS 116-1]
 gi|300956221|ref|ZP_07168533.1| LysM domain protein [Escherichia coli MS 175-1]
 gi|301023323|ref|ZP_07187116.1| LysM domain protein [Escherichia coli MS 69-1]
 gi|301029580|ref|ZP_07192658.1| LysM domain protein [Escherichia coli MS 196-1]
 gi|301305648|ref|ZP_07211737.1| LysM domain protein [Escherichia coli MS 124-1]
 gi|301644529|ref|ZP_07244522.1| LysM domain protein [Escherichia coli MS 146-1]
 gi|307137748|ref|ZP_07497104.1| hypothetical protein EcolH7_06395 [Escherichia coli H736]
 gi|307310110|ref|ZP_07589760.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|309796543|ref|ZP_07690950.1| LysM domain protein [Escherichia coli MS 145-7]
 gi|169755420|gb|ACA78119.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli ATCC 8739]
 gi|187767857|gb|EDU31701.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188014622|gb|EDU52744.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|188999155|gb|EDU68141.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189355237|gb|EDU73656.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189359863|gb|EDU78282.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189365188|gb|EDU83604.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189370390|gb|EDU88806.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189375507|gb|EDU93923.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC508]
 gi|192926051|gb|EDV80694.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E22]
 gi|192955767|gb|EDV86239.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E110019]
 gi|194412141|gb|EDX28449.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B171]
 gi|208728798|gb|EDZ78399.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732991|gb|EDZ81679.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208738072|gb|EDZ85755.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160207|gb|ACI37640.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|217318421|gb|EEC26847.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|260449748|gb|ACX40170.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1]
 gi|299877575|gb|EFI85786.1| LysM domain protein [Escherichia coli MS 196-1]
 gi|300316949|gb|EFJ66733.1| LysM domain protein [Escherichia coli MS 175-1]
 gi|300397048|gb|EFJ80586.1| LysM domain protein [Escherichia coli MS 69-1]
 gi|300405408|gb|EFJ88946.1| LysM domain protein [Escherichia coli MS 84-1]
 gi|300414874|gb|EFJ98184.1| LysM domain protein [Escherichia coli MS 115-1]
 gi|300420991|gb|EFK04302.1| LysM domain protein [Escherichia coli MS 182-1]
 gi|300451797|gb|EFK15417.1| LysM domain protein [Escherichia coli MS 116-1]
 gi|300526405|gb|EFK47474.1| LysM domain protein [Escherichia coli MS 119-7]
 gi|300839076|gb|EFK66836.1| LysM domain protein [Escherichia coli MS 124-1]
 gi|301077111|gb|EFK91917.1| LysM domain protein [Escherichia coli MS 146-1]
 gi|306909828|gb|EFN40322.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|308119855|gb|EFO57117.1| LysM domain protein [Escherichia coli MS 145-7]
 gi|315060390|gb|ADT74717.1| L,D-transpeptidase linking LPP to murein [Escherichia coli W]
 gi|315135745|dbj|BAJ42904.1| hypothetical protein ECDH1ME8569_1048 [Escherichia coli DH1]
 gi|315253013|gb|EFU32981.1| LysM domain protein [Escherichia coli MS 85-1]
 gi|315618285|gb|EFU98875.1| lysM domain protein [Escherichia coli 3431]
 gi|320188120|gb|EFW62785.1| L,D-transpeptidase YcfS [Escherichia coli O157:H7 str. EC1212]
 gi|320201008|gb|EFW75592.1| L,D-transpeptidase YcfS [Escherichia coli EC4100B]
 gi|320637564|gb|EFX07364.1| hypothetical protein ECO5101_10667 [Escherichia coli O157:H7 str.
           G5101]
 gi|320643125|gb|EFX12326.1| hypothetical protein ECO9389_04146 [Escherichia coli O157:H- str.
           493-89]
 gi|320648583|gb|EFX17238.1| hypothetical protein ECO2687_20261 [Escherichia coli O157:H- str. H
           2687]
 gi|323156750|gb|EFZ42886.1| lysM domain protein [Escherichia coli EPECa14]
 gi|323163657|gb|EFZ49479.1| lysM domain protein [Escherichia coli E128010]
 gi|323175268|gb|EFZ60881.1| lysM domain protein [Escherichia coli LT-68]
 gi|323175655|gb|EFZ61249.1| lysM domain protein [Escherichia coli 1180]
 gi|323185764|gb|EFZ71125.1| lysM domain protein [Escherichia coli 1357]
 gi|323379050|gb|ADX51318.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11]
 gi|324017495|gb|EGB86714.1| LysM domain protein [Escherichia coli MS 117-3]
 gi|326339336|gb|EGD63150.1| L,D-transpeptidase YcfS [Escherichia coli O157:H7 str. 1125]
 gi|326340417|gb|EGD64220.1| L,D-transpeptidase YcfS [Escherichia coli O157:H7 str. 1044]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|30062646|ref|NP_836817.1| hypothetical protein S1197 [Shigella flexneri 2a str. 2457T]
 gi|56479826|ref|NP_707028.2| hypothetical protein SF1117 [Shigella flexneri 2a str. 301]
 gi|30040892|gb|AAP16623.1| hypothetical protein S1197 [Shigella flexneri 2a str. 2457T]
 gi|56383377|gb|AAN42735.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|332767335|gb|EGJ97529.1| putative L,D-transpeptidase YcfS [Shigella flexneri 2930-71]
          Length = 320

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|167749731|ref|ZP_02421858.1| hypothetical protein EUBSIR_00698 [Eubacterium siraeum DSM 15702]
 gi|167751426|ref|ZP_02423553.1| hypothetical protein EUBSIR_02422 [Eubacterium siraeum DSM 15702]
 gi|167655672|gb|EDR99801.1| hypothetical protein EUBSIR_02422 [Eubacterium siraeum DSM 15702]
 gi|167657354|gb|EDS01484.1| hypothetical protein EUBSIR_00698 [Eubacterium siraeum DSM 15702]
 gi|291531931|emb|CBK97516.1| Cell Wall Hydrolase./Putative peptidoglycan binding domain
           [Eubacterium siraeum 70/3]
          Length = 231

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+    V+ +++ L   G  +    ++  F    E A+  FQ + GL  +G+ D++TL
Sbjct: 44  QKGSQGSEVEAVQQTLKDRGLFNAE--VTGYFGEKTEEAILRFQKQQGLAQTGVADNATL 101

Query: 163 EAMNVPVDLR--IRQLQVNLMRIKKLLEQKMGLRYV 196
           + + + +          +NL+  + +  +  G  Y+
Sbjct: 102 KRLGISIGSIPPATTANINLL-ARIISAEGRGEPYI 136


>gi|191168573|ref|ZP_03030357.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B7A]
 gi|190901367|gb|EDV61132.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B7A]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|328882102|emb|CCA55341.1| hypothetical protein SVEN_2054 [Streptomyces venezuelae ATCC 10712]
          Length = 333

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 6/72 (8%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVD 158
            L LG+S   V+ L+ RL           ++  FD  V+ AV  +Q    +     G+  
Sbjct: 262 TLSLGSSGPEVRELQRRLEAVWAYHG--RINGRFDEEVQEAVARYQSWRYVQDDPEGVYG 319

Query: 159 SSTLEAM--NVP 168
            +T   +  N P
Sbjct: 320 PTTRRLLEENTP 331


>gi|160915943|ref|ZP_02078151.1| hypothetical protein EUBDOL_01967 [Eubacterium dolichum DSM 3991]
 gi|158432419|gb|EDP10708.1| hypothetical protein EUBDOL_01967 [Eubacterium dolichum DSM 3991]
          Length = 641

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P  P  PL LG+    V  L+  L         + P   ++  F+   +SAV+ FQ +  
Sbjct: 298 PSYPGTPLQLGSVGKDVAMLQAFLNAIAINYPAIRPIFPVNGEFETATQSAVRTFQRQFN 357

Query: 151 LDPSGMVDSSTLE 163
           L   G+V  +T  
Sbjct: 358 LTVDGIVGRTTWY 370



 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 98  PIRPLHLGNSSVSVQRL---RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL LG S  +V+ +     +L       PS  +   F A   +A++ FQ    L   
Sbjct: 491 PGIPLQLGTSGDAVEAVQNAINKLAKQYTDIPSVNVDGIFGAATRNAIRNFQSLFDLTAD 550

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVN 179
           G+V   T E +         QLQ N
Sbjct: 551 GIVGVKTWELL----FSIAAQLQAN 571



 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 10/83 (12%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRE-----RLIISGDLDPSKGLSVAFDAYVE 139
           Y   L  G W +   R L  G+ SV  Q ++      RL       P   +   F A   
Sbjct: 390 YLSTLYSGVWQQ---RVLRQGDRSVETQLMQYYLSSIRLFYPE--IPEVSIDGRFGAGTY 444

Query: 140 SAVKLFQMRHGLDPSGMVDSSTL 162
           +A+  FQ R GL   G+V  +T 
Sbjct: 445 NAILAFQKRFGLTADGLVGQATW 467


>gi|115373620|ref|ZP_01460915.1| interstitial collagenase (Matrixmetalloproteinase-1) (MMP-1)
           (Fibroblast collagenase) [Stigmatella aurantiaca
           DW4/3-1]
 gi|310824941|ref|YP_003957299.1| peptidase [Stigmatella aurantiaca DW4/3-1]
 gi|115369323|gb|EAU68263.1| interstitial collagenase  (Matrixmetalloproteinase-1) (MMP-1)
           (Fibroblast collagenase) [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398013|gb|ADO75472.1| Peptidase [Stigmatella aurantiaca DW4/3-1]
          Length = 477

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 16/79 (20%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD----------------PSKGLSVAFDAYVESAVKLFQ 146
             G+    V+     L   G                           FD  +E+ ++ FQ
Sbjct: 38  RKGSRGPQVEEAFRHLQAHGYFPNAELAREYPGFRPAVAREPARPDVFDDALEAGLQRFQ 97

Query: 147 MRHGLDPSGMVDSSTLEAM 165
              GL  +G +D++T   M
Sbjct: 98  EAQGLPVTGELDAATRALM 116


>gi|313650431|gb|EFS14838.1| lysM domain protein [Shigella flexneri 2a str. 2457T]
 gi|332758276|gb|EGJ88599.1| lysM domain protein [Shigella flexneri 4343-70]
 gi|332761053|gb|EGJ91340.1| lysM domain protein [Shigella flexneri K-671]
 gi|333005662|gb|EGK25180.1| lysM domain protein [Shigella flexneri K-218]
 gi|333019353|gb|EGK38636.1| lysM domain protein [Shigella flexneri K-304]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|320095837|ref|ZP_08027475.1| choline binding protein A [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977226|gb|EFW08931.1| choline binding protein A [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 416

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G + + V  ++ RL I   +  +       DA   +AVK FQ R GL  +G+V
Sbjct: 192 STNTLTWGMNGIKVMIVQRRLGIWHTMKLASV-----DASFVTAVKNFQWRAGLSQTGVV 246

Query: 158 DSSTLEAM 165
           D  T  AM
Sbjct: 247 DEQTWNAM 254


>gi|261226983|ref|ZP_05941264.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. FRIK2000]
          Length = 319

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|242088519|ref|XP_002440092.1| hypothetical protein SORBIDRAFT_09g025870 [Sorghum bicolor]
 gi|241945377|gb|EES18522.1| hypothetical protein SORBIDRAFT_09g025870 [Sorghum bicolor]
          Length = 380

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+    +  L+  L   G +    P+      FD ++E+AV+ +Q    L  +G +DS
Sbjct: 57  RRGSRVAGLADLKRYLARFGYMQAPRPAHEHDDVFDDHMEAAVRRYQSSLSLPVTGRLDS 116

Query: 160 STL 162
           STL
Sbjct: 117 STL 119


>gi|226499088|ref|NP_001151749.1| metalloendoproteinase 1 [Zea mays]
 gi|195649493|gb|ACG44214.1| metalloendoproteinase 1 precursor [Zea mays]
          Length = 365

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           H+G     +  L++ L   G L P       S AFD  +E+A+  +Q   GL+ +G +D 
Sbjct: 50  HMGEERQGLAGLKDYLSHFGYLPPPPPSSPFSDAFDQNLEAAIATYQRNFGLNATGALDP 109

Query: 160 STLEAMNVP 168
           ST+  M  P
Sbjct: 110 STVSQMVAP 118


>gi|239991710|ref|ZP_04712374.1| putative amidase [Streptomyces roseosporus NRRL 11379]
          Length = 517

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S  +V+RL+  L  +  L  + G+  +F    ++AV+ +Q    L   G V  +T
Sbjct: 452 LKQGGSGDAVKRLQRALTAA--LGKTVGVDGSFGPATDTAVRNYQDTRKLGVDGQVGPAT 509

Query: 162 LEAM 165
            +A+
Sbjct: 510 WKAL 513



 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  ++  L           +   F +  +SAV+ FQ    LD  GMV   T  A
Sbjct: 385 GSSGPQVTAVQTLLTQQKYSPG--KVDGLFGSDTKSAVEKFQRDRSLDADGMVGPKTWTA 442

Query: 165 M 165
           +
Sbjct: 443 L 443


>gi|325677685|ref|ZP_08157337.1| putative spore cortex-lytic enzyme [Ruminococcus albus 8]
 gi|324110653|gb|EGC04817.1| putative spore cortex-lytic enzyme [Ruminococcus albus 8]
          Length = 225

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G+    V+ ++E+L   G  +    ++  +     +AV  FQ + G+  +G     TL+
Sbjct: 39  IGSYGTEVRAIQEKLKERGLFNS--NVTGYYGEITRNAVLAFQKQQGISQTGTAGPVTLK 96

Query: 164 AMNVP 168
           A+ + 
Sbjct: 97  ALGIS 101


>gi|310644287|ref|YP_003949046.1| carboxyl-terminal protease [Paenibacillus polymyxa SC2]
 gi|309249238|gb|ADO58805.1| Carboxyl-terminal protease [Paenibacillus polymyxa SC2]
          Length = 488

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 8/91 (8%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    +S  V+  +  L   G     +     FD   ES+V  FQ    L  +G++D+
Sbjct: 391 KSLKYNMNSSDVKNAQIILQGLGYKPGREDG--YFDKVTESSVMAFQKEAKLTANGIIDA 448

Query: 160 STLEAMNVPVDLRIR------QLQVNLMRIK 184
            T  AM   +  +IR      QL+  +  I+
Sbjct: 449 KTAAAMEAKLIEKIRDPKNDNQLKQGIEEIR 479


>gi|328880760|emb|CCA53999.1| hypothetical protein SVEN_0712 [Streptomyces venezuelae ATCC 10712]
          Length = 134

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA---FDAYVESAVKLFQ 146
           +   WP +P   L  G+    V+ L+  LI +  +D +  ++     F    E+AV  FQ
Sbjct: 48  AYNDWP-VPAVDLARGSRGDCVRALQWALIRTNFVDSADVMTFIDGDFGPKTEAAVLRFQ 106

Query: 147 MRH----GLDPSGMVDSSTLEAM 165
            R+    G  P G+V   T   +
Sbjct: 107 SRYPRETG-GPDGIVGIKTWGYL 128


>gi|262275011|ref|ZP_06052822.1| general secretion pathway protein A/general secretion pathway
           protein B [Grimontia hollisae CIP 101886]
 gi|262221574|gb|EEY72888.1| general secretion pathway protein A/general secretion pathway
           protein B [Grimontia hollisae CIP 101886]
          Length = 755

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 102 LHLGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           +  G     V+ L +RL ++ GD  P   +S  F       V+ FQ   GLD  G+  + 
Sbjct: 483 IKFGQRGERVRWLDQRLNLVLGDTTP---VSDIFGQAQRVKVREFQRSKGLDADGIPGAM 539

Query: 161 TLEAM 165
           T   +
Sbjct: 540 TFMVL 544


>gi|323947583|gb|EGB43587.1| ykud domain-containing protein [Escherichia coli H120]
          Length = 301

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 73  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 131

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 132 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 156

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 157 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 203


>gi|218700385|ref|YP_002408014.1| hypothetical protein ECIAI39_2047 [Escherichia coli IAI39]
 gi|218370371|emb|CAR18174.1| conserved hypothetical protein [Escherichia coli IAI39]
          Length = 320

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|332759475|gb|EGJ89783.1| lysM domain protein [Shigella flexneri 2747-71]
          Length = 301

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 73  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 131

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 132 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 156

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 157 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 203


>gi|300816815|ref|ZP_07097035.1| LysM domain protein [Escherichia coli MS 107-1]
 gi|300530589|gb|EFK51651.1| LysM domain protein [Escherichia coli MS 107-1]
          Length = 319

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|154509521|ref|ZP_02045163.1| hypothetical protein ACTODO_02053 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799155|gb|EDN81575.1| hypothetical protein ACTODO_02053 [Actinomyces odontolyticus ATCC
           17982]
          Length = 513

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G +   V+  + RL +            + DA   +AVK FQ R GL  +G+VD
Sbjct: 290 TNTLTWGMNGTKVRIAQVRLGLW-----HSNKLASVDAPFVAAVKNFQQRAGLPVTGVVD 344

Query: 159 SSTLEAMNVPVDLRIRQ 175
            +T +AM+      + Q
Sbjct: 345 KATWDAMDTGYPWTVDQ 361


>gi|315168921|gb|EFU12938.1| peptidase [Enterococcus faecalis TX1341]
          Length = 477

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|312899528|ref|ZP_07758858.1| peptidase [Enterococcus faecalis TX0470]
 gi|311293398|gb|EFQ71954.1| peptidase [Enterococcus faecalis TX0470]
          Length = 480

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|312903429|ref|ZP_07762609.1| peptidase [Enterococcus faecalis TX0635]
 gi|310633305|gb|EFQ16588.1| peptidase [Enterococcus faecalis TX0635]
          Length = 480

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|307277953|ref|ZP_07559037.1| peptidase [Enterococcus faecalis TX0860]
 gi|306505350|gb|EFM74536.1| peptidase [Enterococcus faecalis TX0860]
          Length = 477

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|282897482|ref|ZP_06305483.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
 gi|281197577|gb|EFA72472.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
          Length = 319

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 18/33 (54%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +    E+A+K +Q ++GL   G++  +T   +
Sbjct: 285 IYGRQTEAAIKRYQQQNGLTADGIIGPATWGKL 317



 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 11/95 (11%)

Query: 92  GGWPELPIRPLH--LGNSSV------SVQRLRERLIISG--DLDPSKGLSVAFD-AYVES 140
           G  P  P++P+    G+         S+ RL++ L      D +        F      S
Sbjct: 168 GKLPTTPVKPVEDVTGDQDTKENKDTSILRLQKALNQLKITDRNNRPLTEDNFTGPATSS 227

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           AV+ FQ   G+ P+GM   +T +A+N  +  R  Q
Sbjct: 228 AVEKFQRVVGIIPTGMATQTTWDAINQILAKRTVQ 262


>gi|257089995|ref|ZP_05584356.1| predicted protein [Enterococcus faecalis CH188]
 gi|256998807|gb|EEU85327.1| predicted protein [Enterococcus faecalis CH188]
          Length = 480

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|256853236|ref|ZP_05558606.1| carboxyl-terminal protease [Enterococcus faecalis T8]
 gi|256711695|gb|EEU26733.1| carboxyl-terminal protease [Enterococcus faecalis T8]
 gi|315029270|gb|EFT41202.1| peptidase [Enterococcus faecalis TX4000]
          Length = 480

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|256619174|ref|ZP_05476020.1| carboxyl-terminal protease [Enterococcus faecalis ATCC 4200]
 gi|256598701|gb|EEU17877.1| carboxyl-terminal protease [Enterococcus faecalis ATCC 4200]
          Length = 480

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|255975735|ref|ZP_05426321.1| carboxyl-terminal protease [Enterococcus faecalis T2]
 gi|255968607|gb|EET99229.1| carboxyl-terminal protease [Enterococcus faecalis T2]
          Length = 480

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|300860306|ref|ZP_07106393.1| peptidase, S41 family [Enterococcus faecalis TUSoD Ef11]
 gi|307275859|ref|ZP_07556998.1| peptidase [Enterococcus faecalis TX2134]
 gi|300849345|gb|EFK77095.1| peptidase, S41 family [Enterococcus faecalis TUSoD Ef11]
 gi|306507551|gb|EFM76682.1| peptidase [Enterococcus faecalis TX2134]
 gi|315031956|gb|EFT43888.1| peptidase [Enterococcus faecalis TX0017]
 gi|315577763|gb|EFU89954.1| peptidase [Enterococcus faecalis TX0630]
          Length = 477

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|229545708|ref|ZP_04434433.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis
           TX1322]
 gi|307291882|ref|ZP_07571753.1| peptidase [Enterococcus faecalis TX0411]
 gi|229309158|gb|EEN75145.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis
           TX1322]
 gi|306497148|gb|EFM66694.1| peptidase [Enterococcus faecalis TX0411]
          Length = 477

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|311747003|ref|ZP_07720788.1| putative peptidoglycan binding domain protein [Algoriphagus sp.
           PR1]
 gi|126578703|gb|EAZ82867.1| putative peptidoglycan binding domain protein [Algoriphagus sp.
           PR1]
          Length = 274

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
              +   +V  L+E L   G    S   S  FD   ++AVK FQ +H L   G V   T 
Sbjct: 5   KYRSRGAAVSFLQELLNKVGY---SLNPSGYFDLTTDAAVKDFQQKHDLVVDGKVGVKTW 61

Query: 163 EAM 165
             +
Sbjct: 62  TIL 64


>gi|265766267|ref|ZP_06094308.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263253935|gb|EEZ25400.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 264

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ + LG        L   L  +G    S   S  F   ++ AV  FQ ++ LD  G+V 
Sbjct: 1   MKTIKLGYEGEEALLLCRELKRNGY---SVKESRTFTQEMKEAVIDFQQKNKLDADGIVG 57

Query: 159 SSTLEAM 165
             T E +
Sbjct: 58  YRTWEVL 64


>gi|53714241|ref|YP_100233.1| putative phage-related protein [Bacteroides fragilis YCH46]
 gi|60682298|ref|YP_212442.1| putative phage-related protein [Bacteroides fragilis NCTC 9343]
 gi|52217106|dbj|BAD49699.1| putative phage-related protein [Bacteroides fragilis YCH46]
 gi|60493732|emb|CAH08521.1| putative phage-related protein [Bacteroides fragilis NCTC 9343]
 gi|301163771|emb|CBW23326.1| putative phage-related protein [Bacteroides fragilis 638R]
          Length = 264

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ + LG        L   L  +G    S   S  F   ++ AV  FQ ++ LD  G+V 
Sbjct: 1   MKTIKLGYEGEEALLLCRELKRNGY---SVKESRTFTQEMKEAVIDFQQKNKLDADGIVG 57

Query: 159 SSTLEAM 165
             T E +
Sbjct: 58  YRTWEVL 64


>gi|304438000|ref|ZP_07397944.1| LysM domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304368954|gb|EFM22635.1| LysM domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 256

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 38/106 (35%), Gaps = 8/106 (7%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +V+ ++E LI  G L  +             A++  Q  H L   G+   +T 
Sbjct: 79  KEGMRGGAVKHVQELLIQGGYLAGAADGIAG--PMTREAIERCQAAHQLTVDGICGEATY 136

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQ--KMGLRYVLVNIPAASLE 206
            A++   D     L +   R      Q  + G R V V+  A S  
Sbjct: 137 HALSGGADYDPAALGIVEER----PPQVSRGGGRSVYVSATAYSAY 178


>gi|229816539|ref|ZP_04446838.1| hypothetical protein COLINT_03592 [Collinsella intestinalis DSM
           13280]
 gi|229807874|gb|EEP43677.1| hypothetical protein COLINT_03592 [Collinsella intestinalis DSM
           13280]
          Length = 302

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 21/101 (20%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDP---- 153
           + P+  G    +V+ ++ RL   G + D ++  +  F A   +AV+ F+ + GLD     
Sbjct: 1   MEPISQGMQGPAVEDVQTRLSSLGYMIDAAEMTAKEFGATTAAAVRAFRAQQGLDAGEDV 60

Query: 154 SG-----------MVDSSTLEAMNVP----VDLRIRQLQVN 179
            G            +   TL  + +P     D+R  Q  +N
Sbjct: 61  DGTCWSALVDESYKLGDRTLY-LRLPNFHGADVRALQRALN 100



 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 27/84 (32%), Gaps = 12/84 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W  L      LG+              V+ L+  L   G           F  + E+A++
Sbjct: 65  WSALVDESYKLGDRTLYLRLPNFHGADVRALQRALNTLGFACGVDDG--YFGPHTEAALQ 122

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ   GL   GM    T   +N 
Sbjct: 123 QFQENVGLFADGMAFQDTFNYVNR 146


>gi|78224668|ref|YP_386415.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
 gi|78195923|gb|ABB33690.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
          Length = 482

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGL---RSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                R ++VN+    L   +     L      V VG  +R TP   +R+ R    P W 
Sbjct: 163 PDTPRRGIVVNVATMRLFQYKGDGASLAVSTYPVGVGTKERPTPTGPTRVYRKAARPTWH 222

Query: 246 IPRSII 251
           +P SI 
Sbjct: 223 VPASIA 228


>gi|170768032|ref|ZP_02902485.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia
           albertii TW07627]
 gi|170122798|gb|EDS91729.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia
           albertii TW07627]
          Length = 320

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNAVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|329903586|ref|ZP_08273559.1| General secretion pathway protein A [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548281|gb|EGF32975.1| General secretion pathway protein A [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 530

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           P+  G        L  +L +  D  P+       D      V+ FQ+  GL P G+    
Sbjct: 450 PVSAGAQGPVSDWLAAQLAVI-DGSPAPPAGKPVDEAR---VRRFQLMQGLKPDGIAGPQ 505

Query: 161 TLEAMNVPV 169
           TL  +    
Sbjct: 506 TLMRLASTA 514


>gi|323967054|gb|EGB62480.1| ykud domain-containing protein [Escherichia coli M863]
 gi|323976514|gb|EGB71602.1| ykud domain-containing protein [Escherichia coli TW10509]
 gi|327253512|gb|EGE65150.1| lysM domain protein [Escherichia coli STEC_7v]
          Length = 319

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|226311326|ref|YP_002771220.1| hypothetical protein BBR47_17390 [Brevibacillus brevis NBRC 100599]
 gi|226094274|dbj|BAH42716.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 368

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 34/84 (40%), Gaps = 1/84 (1%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +  + +     L  G  +  V  + + L      D    +   +++Y    VK FQ ++ 
Sbjct: 23  QPAFAKTSFTSLKKGMKNSRVLEVEKMLDAL-HYDYKLVVDKTYNSYTVYNVKAFQKKYK 81

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIR 174
           L  +G+V+ +T + +      R +
Sbjct: 82  LPQTGIVNKTTYDKLTSVYQARKQ 105



 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 19/106 (17%)

Query: 83  AFYQDILSRGGWPELPIRP-----------LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           A  Q   ++   P  P +P           L LG S   V+ L+  L   G        S
Sbjct: 102 ARKQVQPTQPAQPSTPSKPSTPAESNDYATLKLGASGERVKELQTMLAGLGY---KVTAS 158

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-----NVPVDLR 172
             FD     AV LFQ R+    +G  D+ T  A+     N PV  +
Sbjct: 159 GQFDESTRFAVMLFQSRNKQTLTGEADTKTYTAIQTQYKNNPVQPK 204


>gi|150388378|ref|YP_001318427.1| peptidoglycan binding domain-containing protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149948240|gb|ABR46768.1| Peptidoglycan-binding domain 1 protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 320

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V+RL +RL+     DP   +   F    + AV  FQ    +   G+V   T
Sbjct: 130 LRVGSRGPDVERL-QRLLRDNGYDPGP-IDGIFGTRTQLAVIAFQRDLNIVADGIVGPRT 187

Query: 162 LEAMNV 167
              + V
Sbjct: 188 WTGLGV 193


>gi|116624466|ref|YP_826622.1| peptidoglycan binding domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116227628|gb|ABJ86337.1| Peptidoglycan-binding domain 1 protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 262

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 15/77 (19%)

Query: 96  ELPIRPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR------ 148
             P   +  G+    SV  +++RL ++ D          F A  + AV+LFQ R      
Sbjct: 10  AFPGHVVKAGSDDKASVLAIQQRLNLTQD--------GVFSAETQEAVQLFQARSLDFQD 61

Query: 149 HGLDPSGMVDSSTLEAM 165
           H L   G V   T  A+
Sbjct: 62  HPLTVDGQVGPMTWAAL 78


>gi|282911000|ref|ZP_06318802.1| peptidase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282324695|gb|EFB55005.1| peptidase [Staphylococcus aureus subsp. aureus WBG10049]
          Length = 496

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFIVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENLVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|283784906|ref|YP_003364771.1| peptidoglycan-binding protein [Citrobacter rodentium ICC168]
 gi|282948360|emb|CBG87946.1| putative peptidoglycan-binding protein [Citrobacter rodentium
           ICC168]
          Length = 320

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 55/172 (31%), Gaps = 43/172 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL   +    +++N+    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DVPREGIVINLAELRLYYYPPGKDSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTYM-HDTPEPILFNNVVRFETSGCVRVRNII 350
              G  N M    I   +    Y+ H T     F   +R  +SGC+R+R+  
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRDAD 223


>gi|169827478|ref|YP_001697636.1| spore cortex-lytic enzyme (SCLE) [Lysinibacillus sphaericus C3-41]
 gi|168991966|gb|ACA39506.1| Spore cortex-lytic enzyme precursor (SCLE) [Lysinibacillus
           sphaericus C3-41]
          Length = 277

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G     V  L+ RL   G           ++ Y   A++ FQ ++GL   G+  + T
Sbjct: 32  ITRGAYGDDVIELQARLQYLGFYKSKIDGKFGYNTY--WALRNFQEKYGLPVDGIAGAKT 89


>gi|15807153|ref|NP_295882.1| hypothetical protein DR_2159 [Deinococcus radiodurans R1]
 gi|6459963|gb|AAF11713.1|AE002049_18 hypothetical protein DR_2159 [Deinococcus radiodurans R1]
          Length = 255

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
               +   V++L+ RL+    +DP KG    F    E+ V +FQ+ +GL P+G+VD +T 
Sbjct: 172 TPRMNGADVKQLQLRLMDRSHVDPGKGGDGWFGPVTEANVIVFQLANGLKPTGVVDRATW 231

Query: 163 EAM 165
             +
Sbjct: 232 TTL 234


>gi|295839236|ref|ZP_06826169.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|295827362|gb|EFG65354.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 238

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-G 155
           +    L  G+S   V  L+ERL + G      G S  FD  +  A+  +Q+  G     G
Sbjct: 162 VAAPVLRRGDSGPEVGELKERLRLVGIYPGGDGDS--FDRTLAYALTTYQITRGARDEHG 219

Query: 156 MVDSSTLEAM 165
           +  S T   +
Sbjct: 220 VYGSDTRTKL 229


>gi|187730975|ref|YP_001880717.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Shigella boydii CDC
           3083-94]
 gi|187427967|gb|ACD07241.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Shigella boydii CDC
           3083-94]
          Length = 320

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 53/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPTGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W                   +Y K   I +                          
Sbjct: 151 ANPTWT-----------PTANTRARY-KAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|126653377|ref|ZP_01725481.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. B14905]
 gi|126589893|gb|EAZ84024.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. B14905]
          Length = 277

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G     V  L+ RL   G           ++ Y   A++ FQ ++GL   G+  + T
Sbjct: 32  ITRGAYGDDVIELQARLQYLGFYKSKIDGKFGYNTY--WALRNFQEKYGLPVDGIAGAKT 89


>gi|332968505|gb|EGK07568.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. 1501(2011)]
          Length = 369

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 91/245 (37%), Gaps = 39/245 (15%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN---LMRIKK 185
            +   F   V  A++ FQ ++GL  +G +DS T   +     +  + + VN         
Sbjct: 128 AVDGRFGENVVKALQAFQEKNGLQVTGDIDSETWNKLTEDSTINEQPVLVNYTLTDEDVT 187

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG---RVDRQTPILHSRINRIMFNP 242
           L+    G ++       + LEAV         +   G   R++  T    +    +++NP
Sbjct: 188 LISNPKGQQF------ESVLEAV---AEKFHMS--QGLLLRLNADT-SFEAGNTIVVYNP 235

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI-------------DEKGKEVFVEEVDWN 289
           Y   P +I    ++A+  ++  Y  D N  ++                G+   +  +   
Sbjct: 236 Y--QPNAIPVHRVVAVKSKNLLYAYDENDTLVASYPTTMGSVYKPSPNGEYKVLSRIKDP 293

Query: 290 SPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
           +      N      PG  N +    I   ++ +  +H +P P     + R  +SGCVR+ 
Sbjct: 294 TYNKDFKNPKTALPPGPNNPVGRVWIGI-NKRSYGIHGSPNP---ERISRQNSSGCVRLT 349

Query: 348 NIIDL 352
           N   L
Sbjct: 350 NWDAL 354


>gi|213586771|ref|ZP_03368597.1| hypothetical protein SentesTyph_38025 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 257

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 39/124 (31%), Gaps = 33/124 (26%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y       +L   P+       +IN+   ++   + 
Sbjct: 158 MMGYLHFIANIPVKGQRWLYSNKPY-------ALATPPV------SVINQWQIALEEGQL 204

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
             F+A +                A    A+     +     WP+L     L  G  S  V
Sbjct: 205 PMFVASLAPQ---------HPQYAPMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDV 253

Query: 112 QRLR 115
             LR
Sbjct: 254 PALR 257


>gi|85374415|ref|YP_458477.1| putative bacteriophage-acquired protein [Erythrobacter litoralis
           HTCC2594]
 gi|84787498|gb|ABC63680.1| putative bacteriophage-acquired protein [Erythrobacter litoralis
           HTCC2594]
          Length = 343

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 8/68 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P R + +G+   SV  L+E L ++ D D        F    +SAV  FQ +  L P G+V
Sbjct: 201 PQRVIRMGDKGQSVMHLQELLGLTKDGD--------FGPGTKSAVIKFQKKAKLHPDGIV 252

Query: 158 DSSTLEAM 165
              T  A+
Sbjct: 253 GGQTWAAL 260



 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 14/80 (17%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           QD+  R         PL L +    V+ L++ L +  D D        F     + VK F
Sbjct: 275 QDLAQR------SRAPLRLHDKGDDVKFLQKLLGLIEDGD--------FGPATLARVKKF 320

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q  +GL   G+V  +T   +
Sbjct: 321 QQENGLVDDGIVGRNTWARL 340


>gi|332665190|ref|YP_004447978.1| peptidoglycan-binding domain 1 protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332334004|gb|AEE51105.1| Peptidoglycan-binding domain 1 protein [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 363

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ L L +S  +V  L+  L   G       +   F     + VK FQ +H L   G+V 
Sbjct: 1   MQTLKLDSSGHAVIVLQHFLKTIG---QPISVDGEFGPKTLAQVKAFQSKHKLRADGVVG 57

Query: 159 SSTLEAM 165
             T   +
Sbjct: 58  PKTWSLL 64


>gi|284046149|ref|YP_003396489.1| peptidoglycan-binding protein [Conexibacter woesei DSM 14684]
 gi|283950370|gb|ADB53114.1| Peptidoglycan-binding domain 1 protein [Conexibacter woesei DSM
           14684]
          Length = 329

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G S   V+ L++ L  +G    S  +   F +  +  VK FQ    L  +G+VD+
Sbjct: 111 RVLKKGMSGQDVRVLQDYLNRAGF---STTIDGQFGSGTQRLVKRFQQAQELTVTGIVDA 167

Query: 160 STLEAM 165
           +T+ A+
Sbjct: 168 ATVTAL 173



 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  R L  G S   V+ L++ L  +G   P  G    F       VK F+ ++ L   G
Sbjct: 16  ALGRRTLKQGMSGQDVRVLQDFLTRAGFTTPVGGD---FGPITLGNVKKFEKQYRLTVDG 72

Query: 156 MVDSSTLEAMNVPVDLR 172
           + DS+ +  +    D R
Sbjct: 73  IADSAFVTKLREVADPR 89


>gi|255640072|gb|ACU20327.1| unknown [Glycine max]
          Length = 305

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             H G +   +  ++      G +  +      FD  + SA+K +Q  + L+ +G  D +
Sbjct: 44  TYHPGQNYKGLSNVKNYFHHLGYIPNAPHFDDNFDDTLVSAIKTYQKNYNLNVTGKFDIN 103

Query: 161 TLEAMNVP 168
           TL+ +  P
Sbjct: 104 TLKQIMTP 111


>gi|333004925|gb|EGK24445.1| lysM domain protein [Shigella flexneri VA-6]
          Length = 229

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 42/164 (25%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWV 245
                  +++NI    L     GK       + +G++  D  TP + + ++    NP W 
Sbjct: 96  PDAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWT 155

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
              +I  +             K   I +                             G  
Sbjct: 156 PTANIRAR------------YKAQGIEL-----------------------PAVVPAGPD 180

Query: 306 NAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
           N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 181 NPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|295096070|emb|CBK85160.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 337

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 40/172 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           +L        ++VN+    L     G+ +     + +G++  +TP+  +R+++ + NP W
Sbjct: 89  MLLPDTEREGIVVNLAELRLYFYPPGENIVQVYPLGIGQLGLETPVSTTRVSQKIPNPTW 148

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I  + +               I +                             G 
Sbjct: 149 TPTAGIRARSL------------AQGIKL-----------------------PPVVPAGP 173

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 174 NNPLGRFALRLGIGNGEYLIHGTSAP---DSVGLRVSSGCMRMNAPDIKALF 222


>gi|288549505|ref|ZP_05967273.2| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288318218|gb|EFC57156.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 323

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L     GK       + +G++  D  TP + + ++   
Sbjct: 94  LQTLLP-DAPREGIVINLAELRLYYYPPGKNEVTVYPIGIGQLGGDTLTPTMVTTVSDKR 152

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 153 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 177

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 178 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 224


>gi|186682970|ref|YP_001866166.1| cell wall hydrolase/autolysin [Nostoc punctiforme PCC 73102]
 gi|186465422|gb|ACC81223.1| cell wall hydrolase/autolysin [Nostoc punctiforme PCC 73102]
          Length = 313

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 21/103 (20%)

Query: 76  AQTEKAIAFYQDI--------LSRGGWPEL----PIRPLHLGNSSVSVQR-LRERLIISG 122
           A T+ A+  +Q I             W  +      R +   ++  +V R L+ RL +  
Sbjct: 217 ANTKSAVEKFQAIIGVQTTGIADSTTWNAINLILAKRIIRPNHAGGAVVRYLQYRLGVEN 276

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           D          +    E  VK FQ ++GLD  G+V  ++ + +
Sbjct: 277 D--------GVYGPQTEVVVKNFQKQNGLDADGIVGPASWQKL 311


>gi|321311605|ref|YP_004203892.1| carboxy-terminal processing protease [Bacillus subtilis BSn5]
 gi|320017879|gb|ADV92865.1| carboxy-terminal processing protease [Bacillus subtilis BSn5]
          Length = 466

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 10/107 (9%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            Q +  +  Y  +      P L   +    G++  +V+  ++ L   G       ++  +
Sbjct: 359 PQVKAELPDYAKL------PYLDADKTYKSGDTGTNVKVAQKMLKALGY---KVKVNSTY 409

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           D    S VK FQ +  L+ +G++   T   + + +  ++      + 
Sbjct: 410 DQDFVSVVKQFQKKEKLNETGILTGDTTTKLMIELQKKLSDNDTQME 456


>gi|159898673|ref|YP_001544920.1| N-acetylmuramoyl-L-alanine amidase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891712|gb|ABX04792.1| N-acetylmuramoyl-L-alanine amidase family 2 [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 356

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 7/72 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L       G +      LR R         +     AF    E+AVK FQ  +GL  
Sbjct: 226 WPILRRNTPATGLAKTMQYLLRAR-------GATITADGAFGPGTETAVKSFQTANGLTS 278

Query: 154 SGMVDSSTLEAM 165
            G+V ++T E +
Sbjct: 279 DGVVGAATWEKL 290



 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W +L I  L  G++  +V+ L+ +L +         +  +F   V + V+ FQ    L  
Sbjct: 287 WEKL-IMTLRSGDTGEAVKALQNQLTVQSY---PTTIDGSFGTGVNTLVRAFQTNRQLTV 342

Query: 154 SGMVD 158
            G+V 
Sbjct: 343 DGVVG 347


>gi|291483763|dbj|BAI84838.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 317

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 96  ELPIRPLHLGN---SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMR 148
            LP   + + +       V++++  L            + G+   +     +AVK FQ  
Sbjct: 237 PLPSGVIKVTSPLTKGTKVKQVQTALAALYFYPDKGAKNHGVDGVYGPKTANAVKRFQSV 296

Query: 149 HGLDPSGMVDSSTLEAM 165
            GL   G+    T   +
Sbjct: 297 SGLTADGIYGPKTKAKL 313


>gi|297196973|ref|ZP_06914370.1| peptidoglycan binding domain-containing protein [Streptomyces
           sviceus ATCC 29083]
 gi|197717507|gb|EDY61541.1| peptidoglycan binding domain-containing protein [Streptomyces
           sviceus ATCC 29083]
          Length = 250

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G  +  V+ ++ RL   G   P   +   F  +  +A + FQ  +GL   G+V + T 
Sbjct: 184 KTGTVAEGVKNIQRRLNELG-WSPPLDVDGKFGPHSAAAARWFQTNNGLTADGIVGNQTW 242

Query: 163 EAM 165
             +
Sbjct: 243 RRL 245


>gi|16078311|ref|NP_389128.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309095|ref|ZP_03590942.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313422|ref|ZP_03595227.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318345|ref|ZP_03599639.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322618|ref|ZP_03603912.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321314988|ref|YP_004207275.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis BSn5]
 gi|45477245|sp|O34391|XLYB_BACSU RecName: Full=N-acetylmuramoyl-L-alanine amidase XlyB; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           Flags: Precursor
 gi|2633600|emb|CAB13103.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|2645866|gb|AAB87514.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320021262|gb|ADV96248.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis BSn5]
          Length = 317

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 96  ELPIRPLHLGN---SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMR 148
            LP   + + +       V++++  L            + G+   +     +AVK FQ  
Sbjct: 237 PLPSGVIKVTSPLTQGTKVKQVQTALAALYFYPDKGAKNHGVDGVYGPKTANAVKRFQSV 296

Query: 149 HGLDPSGMVDSSTLEAM 165
            GL   G+    T   M
Sbjct: 297 SGLTADGIYGPKTKAKM 313


>gi|2827777|sp|P29136|MEP1_SOYBN RecName: Full=Metalloendoproteinase 1; AltName: Full=SMEP1; Flags:
           Precursor
 gi|1679656|gb|AAB26959.1| metalloproteinase [Glycine max]
          Length = 305

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             H G +   +  ++      G +  +      FD  + SA+K +Q  + L+ +G  D +
Sbjct: 44  TYHPGQNYKGLSNVKNYFHHLGYIPNAPHFDDNFDDTLVSAIKTYQKNYNLNVTGKFDIN 103

Query: 161 TLEAMNVP 168
           TL+ +  P
Sbjct: 104 TLKQIMTP 111


>gi|258512822|ref|YP_003186256.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479548|gb|ACV59867.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 339

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 20/95 (21%)

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMN--VPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
           E AV  F+ +H L   G+     + A++  +    R  Q+                  Y+
Sbjct: 173 EGAVMAFESQHHLAVDGIAGPDVIHALSEALAAGERAPQV---------------PYSYI 217

Query: 197 LV--NIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           LV  ++P  +LE   NGK+ L S    G     TP
Sbjct: 218 LVTTSLPE-TLELWVNGKLVLTSLCNTGIPQAPTP 251


>gi|149921154|ref|ZP_01909612.1| hypothetical protein PPSIR1_24989 [Plesiocystis pacifica SIR-1]
 gi|149818041|gb|EDM77500.1| hypothetical protein PPSIR1_24989 [Plesiocystis pacifica SIR-1]
          Length = 335

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              ++ A++     AVK +Q RHGL   GMV + T   +
Sbjct: 31  GTSVTGAWNDETVEAVKQWQGRHGLKADGMVGAGTYATL 69


>gi|297804516|ref|XP_002870142.1| hypothetical protein ARALYDRAFT_493212 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315978|gb|EFH46401.1| hypothetical protein ARALYDRAFT_493212 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 362

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G+    V  L+  L   G + D S+  S  FD  +ESA+ L+Q   GL  +G +D+ST
Sbjct: 61  QIGSHVNGVSELKRYLHRFGYVNDGSESFSDVFDGPLESAISLYQENLGLPITGRLDTST 120

Query: 162 LEAMNVP 168
           +  M++P
Sbjct: 121 VSLMSLP 127


>gi|223984153|ref|ZP_03634304.1| hypothetical protein HOLDEFILI_01597 [Holdemania filiformis DSM
           12042]
 gi|223963885|gb|EEF68246.1| hypothetical protein HOLDEFILI_01597 [Holdemania filiformis DSM
           12042]
          Length = 171

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL  G++ + VQ+++  L               F A  E+ V  FQ  H L P G +   
Sbjct: 102 PLEYGDTGLEVQKMQNYLNKLTLPSTPITADGVFGAKTEAKVIAFQNAHSLTPDGKIGEK 161

Query: 161 TL 162
           T 
Sbjct: 162 TW 163



 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 8/78 (10%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQ 146
           +GG+  +    +  G + ++V++++  L +      DL P      +F +  E+AV +FQ
Sbjct: 2   KGGFTHMAY-VIRRGYTGLAVKKMQHYLNVLRTSYPDL-PVLKEDGSFGSATENAVMIFQ 59

Query: 147 MRHGLDPSGMVDSSTLEA 164
              GL   G++   TL  
Sbjct: 60  KHTGLTADGIIG--TLTW 75


>gi|254424824|ref|ZP_05038542.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
 gi|196192313|gb|EDX87277.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
          Length = 339

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 18/117 (15%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++  SV  L+ERL   G       +   +    +  V+ +Q    L  +G  D  
Sbjct: 198 TLAPGSTGSSVIALQERLNNFG---IPVFVDGTYGFETQQGVRTYQRLQRLPVTGTADRR 254

Query: 161 TLEAMNVPVDLR-----IRQLQV---NLMRIKKLLE-----QKMGLRYVLVNIPAAS 204
           TL +M   V  +     I  +      L  I++L       ++ G R++  NI +  
Sbjct: 255 TLSSMGFSVSSKPIRPYISAVIADESALDSIRELFPEAYVDRERGGRFI--NIGSFE 309



 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           L  R L  G+    V+ L+  L  +G           +       V  +Q    L  +G+
Sbjct: 55  LTRRALRRGDIGEDVRALQLYLSQNGLFPYQADG--IYGQETVDGVVTYQRIRDLPATGI 112

Query: 157 VDSSTLEAM 165
            D  TL  M
Sbjct: 113 ADEETLRDM 121


>gi|302532770|ref|ZP_07285112.1| predicted protein [Streptomyces sp. C]
 gi|302441665|gb|EFL13481.1| predicted protein [Streptomyces sp. C]
          Length = 138

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+S   V  L+  L     LD   GL   + A  E+AV+  Q R+GL   G+   ST  
Sbjct: 62  GSSGDHVLALQHALQGCQGLDTG-GLDGIYGAKTEAAVRTLQSRNGLSVDGVYGPSTRN 119


>gi|163855444|ref|YP_001629742.1| peptidoglycan binding-like domain-containing protein [Bordetella
           petrii DSM 12804]
 gi|163259172|emb|CAP41472.1| protein with peptidoglycan binding-like domain [Bordetella petrii]
          Length = 270

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 39/115 (33%), Gaps = 5/115 (4%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVS 110
           R  +          +  P  +    A T    A  + I   G   +     L     S  
Sbjct: 83  RLTSARTTASEAAAAQTPGPAARHSAPTGAQAATLRAIGGSGSLTQ----ELRYRVKSPQ 138

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V+ L+ RL ++  L     +   F      AV  FQ  +G   +GMVD  T + +
Sbjct: 139 VRELQVRLRLAKYLALYD-VDDRFGMLTREAVLKFQRDNGFRATGMVDQQTWDTL 192


>gi|111225991|ref|YP_716785.1| N-acetylmuramoyl-L-alanine amidase [Frankia alni ACN14a]
 gi|111153523|emb|CAJ65280.1| N-acetylmuramoyl-L-alanine amidase (Autolysin) [Frankia alni
           ACN14a]
          Length = 233

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G     V+  + R+   G      G    F     +A + FQ  HGL   G+V  +T  
Sbjct: 173 VGQDRADVRAWQTRMSQLGYPIAVDG---HFGPRSAAAARSFQGSHGLAVDGIVGPATWH 229

Query: 164 A 164
           A
Sbjct: 230 A 230


>gi|329894374|ref|ZP_08270244.1| general secretion pathway protein A [gamma proteobacterium
           IMCC3088]
 gi|328923170|gb|EGG30493.1| general secretion pathway protein A [gamma proteobacterium
           IMCC3088]
          Length = 121

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG+  + V  + +R     D          F   +   V  FQ   GL   GMV   TL 
Sbjct: 41  LGSIGLDVVDIAQRFGRY-DRTNQVLADEVFTQALHERVIQFQAEQGLTTDGMVGRETLV 99

Query: 164 AMNVPVDLR 172
           A+   ++ R
Sbjct: 100 ALAAQMNER 108


>gi|256826841|ref|YP_003150800.1| putative peptidoglycan-binding domain-containing protein
           [Cryptobacterium curtum DSM 15641]
 gi|256582984|gb|ACU94118.1| putative peptidoglycan-binding domain-containing protein
           [Cryptobacterium curtum DSM 15641]
          Length = 303

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 13/90 (14%)

Query: 86  QDILSRGGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +D +    W  L      LG+              V  L++ L   G    + G+   F 
Sbjct: 58  RDEVDDKVWALLLDATFRLGDRTLYLRMPYFHGNDVAELQQALDALGFATSTDGM---FG 114

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           A+ E A++LFQM  GL   G+  S T  A+
Sbjct: 115 AHTELALRLFQMNMGLPSDGIAGSFTFRAI 144


>gi|237731095|ref|ZP_04561576.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906634|gb|EEH92552.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 323

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + G        + +G++  D  TP + + I+   
Sbjct: 94  LQTLLP-DAPREGIVINLAELRLYYYQPGTNSVTVYPIGIGQLGGDTLTPTMVTTISDKR 152

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K N I +                          
Sbjct: 153 ANPTWTPTANIRAR------------YKANGIDL-----------------------PAV 177

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 178 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 224


>gi|257082442|ref|ZP_05576803.1| carboxyl-terminal protease [Enterococcus faecalis E1Sol]
 gi|256990472|gb|EEU77774.1| carboxyl-terminal protease [Enterococcus faecalis E1Sol]
          Length = 480

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPITGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|323190465|gb|EFZ75739.1| lysM domain protein [Escherichia coli RN587/1]
          Length = 319

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPSWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|118485900|gb|ABK94796.1| unknown [Populus trichocarpa]
          Length = 309

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G +   +  L++ L   G          S  FD ++E A+K +Q    L+ +G +DSS
Sbjct: 47  KKGQTVQGLIELKQYLKKLGYYPSDDITLTSSDFDDHLELALKTYQEYFHLNVTGNLDSS 106

Query: 161 TLEAMNVP 168
           T++ M +P
Sbjct: 107 TIQQMVIP 114


>gi|323136809|ref|ZP_08071890.1| Peptidoglycan-binding domain 1 protein [Methylocystis sp. ATCC
           49242]
 gi|322398126|gb|EFY00647.1| Peptidoglycan-binding domain 1 protein [Methylocystis sp. ATCC
           49242]
          Length = 155

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERL--IISGDLDPSKGLSVAFDAYVESAVKLFQMR--- 148
           W  L    +  G+    V+ L+  L      + DP       F    E+AVK FQ     
Sbjct: 75  WFRLAPAEVKKGSKGAGVRLLQGILKSFAVPEYDPGAVDGD-FGPTTETAVKAFQADFFD 133

Query: 149 ---HGLDPSGMVDSSTLEAM 165
              + L   G+V + T  A+
Sbjct: 134 FDGNPLKVDGIVGAKTWAAL 153


>gi|150018076|ref|YP_001310330.1| peptidoglycan binding domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149904541|gb|ABR35374.1| Peptidoglycan-binding domain 1 protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 501

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 16/91 (17%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P R L LG+S  +V+ ++ +L        L P       +     +AVK FQ    L  +
Sbjct: 385 PGRELTLGSSGPAVRAIQGQLNRIARNYPLIPKIAEDGKYGPKTAAAVKTFQQIFTLPQT 444

Query: 155 GMVDSST-------------LEAMNVPVDLR 172
           G+VD +T             L  +N     R
Sbjct: 445 GVVDYATWYRISDIYVGVTKLAELNTTESSR 475


>gi|84501438|ref|ZP_00999643.1| hypothetical protein OB2597_13773 [Oceanicola batsensis HTCC2597]
 gi|84390729|gb|EAQ03217.1| hypothetical protein OB2597_13773 [Oceanicola batsensis HTCC2597]
          Length = 548

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 12/136 (8%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            A    EI +    +   D  + ++  +    D+     ++  I +  +     +D  + 
Sbjct: 420 QAEADAEIRDAWERARSEDTEEAYIRFLRRYPDNAFAGAARSRITELREPP---RDTAA- 475

Query: 92  GGWPELPIRPLHLGNSSVSV--QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
               E   R    G  +  +    +  RL   G    +      FDA    A++ FQ   
Sbjct: 476 ----EEAARQQEAGVVNNPITRVLVERRLQQLGFEPGAPDG--RFDAETRRAIRRFQRSR 529

Query: 150 GLDPSGMVDSSTLEAM 165
           GL+ +G V  +T+  +
Sbjct: 530 GLEVTGFVTQATMVRL 545


>gi|307942391|ref|ZP_07657742.1| N-acetylmuramoyl-L-alanine amidase [Roseibium sp. TrichSKD4]
 gi|307774677|gb|EFO33887.1| N-acetylmuramoyl-L-alanine amidase [Roseibium sp. TrichSKD4]
          Length = 258

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G++   V R RE L    D          +  FD  +E     FQ   G+   
Sbjct: 149 PDGLLRRGDAGPDVHRWREDLGAYRDKIGHPYPVPATGPFDHTLELVTMWFQKERGIQVD 208

Query: 155 GMVDSSTLEAM 165
           G+V    LE M
Sbjct: 209 GIVGPQVLEEM 219


>gi|220927494|ref|YP_002504403.1| spore cortex-lytic enzyme [Clostridium cellulolyticum H10]
 gi|219997822|gb|ACL74423.1| spore cortex-lytic enzyme [Clostridium cellulolyticum H10]
          Length = 231

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V+ +++ L   G  D +      +D     +V  +Q ++GL  +G+ 
Sbjct: 30  SAPSLKIGDRGEEVKDMQQELKNWGYFDGNVDGRFGYD--TLRSVLSYQRQYGLKANGIA 87

Query: 158 DSSTL 162
           D +TL
Sbjct: 88  DRTTL 92


>gi|298694714|gb|ADI97936.1| carboxy-terminal processing proteinase [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 496

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        +  FD  +E+ +K FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSDLGY--KVDNETTQFDQALENQIKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|47215736|emb|CAG05747.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 560

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 14/97 (14%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P    + A  +   VE+A+K  Q  +GL  +G +D  T+EAM  P     D 
Sbjct: 3   LQKFGYLPPGDVRAQALRSPKTVETAIKAMQRFYGLSVTGSIDPQTIEAMRRPRCGVPDK 62

Query: 172 RIRQLQVNLMRIK------KLLEQKMGLRYVLVNIPA 202
              +L+ NL R +      K  + ++  RY  VN+  
Sbjct: 63  FGPELKTNLRRKRFAVQGQKWDKSEVTFRY--VNMAD 97


>gi|254414414|ref|ZP_05028180.1| D-alanyl-D-alanine carboxypeptidase family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196178644|gb|EDX73642.1| D-alanyl-D-alanine carboxypeptidase family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 881

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 4/73 (5%)

Query: 94  WPELPIRPLH-LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W    I  L       + V+++++ L    D     G+   F    ++AVKLFQ    L 
Sbjct: 292 WQGFEIIKLTSPYMHGIDVRKIQQALA---DAKIDVGVDGVFGPGTQAAVKLFQKARNLI 348

Query: 153 PSGMVDSSTLEAM 165
             G+V  +TL  +
Sbjct: 349 TDGVVGPATLVQL 361


>gi|153811479|ref|ZP_01964147.1| hypothetical protein RUMOBE_01871 [Ruminococcus obeum ATCC 29174]
 gi|149832606|gb|EDM87690.1| hypothetical protein RUMOBE_01871 [Ruminococcus obeum ATCC 29174]
          Length = 512

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 49/189 (25%), Gaps = 60/189 (31%)

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG---RVDRQTPILHSRINR 237
           MR        +G  Y+ V++    +   +NG +  +S ++ G     DR+T         
Sbjct: 371 MRANAHGINDLGDTYIEVDLTEQYMWYYQNGNIIFQSEIVSGLPSDPDRKT--------- 421

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
                    P  I                      +  +    V   E+  N      + 
Sbjct: 422 ---------PPGI--------------------FTLNSKSSPSVLRGEMTAN----GTYS 448

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE---TSGCVRV--RNIIDL 352
           + Q                       HD      F    R+    + GC+ +   N   L
Sbjct: 449 YEQP---------VTYWMPFNGGIGFHDADWQPYFGGD-RYLTGGSHGCINLPPENAGQL 498

Query: 353 DVWLLKDTP 361
              +  D P
Sbjct: 499 YSLIQYDVP 507


>gi|330830952|ref|YP_004393904.1| LysM domain-containing protein [Aeromonas veronii B565]
 gi|328806088|gb|AEB51287.1| LysM domain protein [Aeromonas veronii B565]
          Length = 306

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 42/154 (27%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     GK  +    + +G++   TP    +++ R   NP W    +I ++
Sbjct: 100 IVINVAEMRLYYYPKGKNVVEVLPIGIGQLGVNTPENWITKVERKRANPTWTPTENIRRR 159

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               + +          G  N M    +
Sbjct: 160 -----------------------------------YAAQGKTLPAVWPAGPDNPMGLHAL 184

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
              +      H T     F   +R  +SGCVR+R
Sbjct: 185 YIGNLYAI--HGTNAT--FGIGLR-VSSGCVRLR 213


>gi|47202237|emb|CAF87535.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 279

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 14/97 (14%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P    + A  +   VE+A+K  Q  +GL  +G +D  T+EAM  P     D 
Sbjct: 3   LQKFGYLPPGDVRAQALRSPKTVETAIKAMQRFYGLSVTGSIDPQTIEAMRRPRCGVPDK 62

Query: 172 RIRQLQVNLMRIK------KLLEQKMGLRYVLVNIPA 202
              +L+ NL R +      K  + ++  RY  VN+  
Sbjct: 63  FGPELKTNLRRKRFAVQGQKWDKSEVTFRY--VNMAD 97


>gi|332705083|ref|ZP_08425167.1| Putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332356150|gb|EGJ35606.1| Putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 238

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +P   G+    V+ L+E L+       +  +   F    E AVK FQ    L   G+V 
Sbjct: 176 TKPYLEGD---DVRELQEALVK---ATITVEVDGVFGPATEEAVKEFQKLKDLTVDGIVG 229

Query: 159 SSTLEAM 165
            +T  A+
Sbjct: 230 PATRSAL 236


>gi|317124408|ref|YP_004098520.1| peptidoglycan-binding protein [Intrasporangium calvum DSM 43043]
 gi|315588496|gb|ADU47793.1| Peptidoglycan-binding domain 1 protein [Intrasporangium calvum DSM
           43043]
          Length = 679

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 19/113 (16%)

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQ-DILSRGGWPELPIRP----------LHLGNSSVS 110
            +D     ++++ +A  ++++A  Q  +++   W  L  R           L LG++   
Sbjct: 568 AVDGVFGSLTRDKVAALQRSLALPQTGVVTPEVWEVLESREFPFAAHRTTVLRLGDTGPQ 627

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           V  ++  L +          +  FD    +AVK  Q R GL  +G+V S T  
Sbjct: 628 VSAVQRVLGV--------RPTGVFDERTRAAVKEAQARAGLASTGVVASRTWS 672



 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q++L   GWP      L +G +S +VQ L+ RL   G+L      +  F +   + V  +
Sbjct: 422 QELLYTKGWPT-TYPTLSVGMTSTAVQNLQARL---GNLP----TTGYFGSMTRARVIEY 473

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q   GL  +G+ D+ T + +
Sbjct: 474 QRFVGLATTGVADNRTQQLL 493



 Score = 42.9 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 9/82 (10%)

Query: 86  QDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           Q+IL++ GW  +      L  G +S +V+ L+ +L            +  F +  +  V 
Sbjct: 273 QEILAKRGWRTVSAAFPTLSYGMTSSAVRTLQTKLGSL-------PTTGYFGSLTKDRVL 325

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            +Q   GL  +G  D  T   +
Sbjct: 326 AYQKFVGLPQTGTADPVTQYRL 347



 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            + GG        L +G +S +V+ L+  L   G+L      +  F +  ++ V  +Q  
Sbjct: 356 ATSGGGTATTYPTLSIGTTSAAVKNLQAEL---GNLP----TTGYFGSMTQARVTEYQKA 408

Query: 149 HGLDPSGMVDSSTLEAM 165
            GL  +G+ D +T E +
Sbjct: 409 VGLPATGIADQTTQELL 425


>gi|302760259|ref|XP_002963552.1| hypothetical protein SELMODRAFT_404832 [Selaginella moellendorffii]
 gi|300168820|gb|EFJ35423.1| hypothetical protein SELMODRAFT_404832 [Selaginella moellendorffii]
          Length = 433

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMV 157
            R L  G     V+ L+E L   G       +   +F +  + AVK +Q   G    G+V
Sbjct: 230 ARSLKYGAEGDDVKLLQEALAKLGFYCGDDDMEYASFSSGTDRAVKSWQSSIGAAEDGIV 289

Query: 158 DSSTLEAM 165
            +  L  +
Sbjct: 290 TAQVLSQL 297


>gi|302799535|ref|XP_002981526.1| hypothetical protein SELMODRAFT_421058 [Selaginella moellendorffii]
 gi|300150692|gb|EFJ17341.1| hypothetical protein SELMODRAFT_421058 [Selaginella moellendorffii]
          Length = 433

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMV 157
            R L  G     V+ L+E L   G       +   +F +  + AVK +Q   G    G+V
Sbjct: 230 ARSLKYGAEGDDVKLLQEALAKLGFYCGDDDMEYASFSSGTDRAVKSWQSSIGAAEDGIV 289

Query: 158 DSSTLEAM 165
            +  L  +
Sbjct: 290 TAQVLSQL 297


>gi|295110060|emb|CBL24013.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
           [Ruminococcus obeum A2-162]
          Length = 502

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 49/189 (25%), Gaps = 60/189 (31%)

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG---RVDRQTPILHSRINR 237
           MR        +G  Y+ V++    +   +NG +  +S ++ G     DR+T         
Sbjct: 361 MRANAHGINDLGDTYIEVDLTEQYMWYYQNGNIIFQSEIVSGLPSDPDRKT--------- 411

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
                    P  I                      +  +    V   E+  N      + 
Sbjct: 412 ---------PPGI--------------------FTLNSKSSPSVLRGEMTAN----GTYS 438

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE---TSGCVRV--RNIIDL 352
           + Q                       HD      F    R+    + GC+ +   N   L
Sbjct: 439 YEQP---------VTYWMPFNGGIGFHDADWQPYFGGD-RYLTGGSHGCINLPPENAGQL 488

Query: 353 DVWLLKDTP 361
              +  D P
Sbjct: 489 YSLIQYDVP 497


>gi|291550822|emb|CBL27084.1| Putative peptidoglycan-binding domain-containing protein
           [Ruminococcus torques L2-14]
          Length = 430

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+    V++++E L +I+G     P       +    E+AV+ FQ   GL  +
Sbjct: 346 PGYTLEQGSQGPKVRQIQEELNVIAGAYPEIPKLTEDGIYGPETEAAVRKFQSIFGLPVT 405

Query: 155 GMVDSSTLE 163
           G +D  T  
Sbjct: 406 GEIDYKTWY 414


>gi|282599261|ref|YP_003358573.1| hypothetical protein [Shigella phage phiSboM-AG3]
 gi|226973567|gb|ACO94320.1| conserved hypothetical phage protein [Shigella phage phiSboM-AG3]
          Length = 264

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG     V+ L++ L   G    + G    F    E+AVK  Q   GL   G+V   T
Sbjct: 4   LKLGTRGSEVKSLQQSLNKIGFTLVADG---IFGKATENAVKTVQAGAGLVIDGIVGPKT 60

Query: 162 LEAM 165
             A+
Sbjct: 61  SYAI 64


>gi|259046708|ref|ZP_05737109.1| carboxy-terminal processing peptidase [Granulicatella adiacens ATCC
           49175]
 gi|259036604|gb|EEW37859.1| carboxy-terminal processing peptidase [Granulicatella adiacens ATCC
           49175]
          Length = 497

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+ S +V+ +   L   G           FD+    AVK FQ   G+  +G V+  T 
Sbjct: 415 KEGSVSDNVKTIETILKGLGY---DVKADGYFDSKTTEAVKQFQKSKGISETGEVNEQTG 471

Query: 163 EAM 165
            A+
Sbjct: 472 SAL 474


>gi|1402944|emb|CAA66987.1| orfRM1 [Bacillus subtilis]
          Length = 466

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 10/107 (9%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            Q +  +  Y  +      P L   +    G++  +V+  ++ L   G       ++  +
Sbjct: 359 PQVKAELPDYAKL------PYLDADKTYKSGDTGTNVKVAQKMLKALGY---KVKVNSMY 409

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           D    S VK FQ +  L+ +G++   T   + + +  ++      + 
Sbjct: 410 DQDFVSVVKQFQKKEKLNETGILTGDTTTKLMIELQKKLSDNDTQME 456


>gi|16079017|ref|NP_389840.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309859|ref|ZP_03591706.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314182|ref|ZP_03595987.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319105|ref|ZP_03600399.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323378|ref|ZP_03604672.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81669151|sp|O34666|CTPA_BACSU RecName: Full=Carboxy-terminal processing protease CtpA;
           Short=C-terminal processing protease; Flags: Precursor
 gi|2415395|gb|AAB72063.1| proteinase [Bacillus subtilis]
 gi|2529476|gb|AAB81168.1| OrfRM1 [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634351|emb|CAB13850.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 466

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 41/107 (38%), Gaps = 10/107 (9%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            Q +  +  Y  +      P L   +    G++  +V+  ++ L   G       ++  +
Sbjct: 359 PQVKAELPDYAKL------PYLDADKTYKSGDTGTNVKVAQKMLKALGY---KVKVNSMY 409

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           D    S VK FQ +  L+ +G++   T   + + +  ++      + 
Sbjct: 410 DQDFVSVVKQFQKKEKLNETGILTGDTTTKLMIELQKKLSDNDTQME 456


>gi|320184240|gb|EFW59054.1| L,D-transpeptidase YcfS [Shigella flexneri CDC 796-83]
          Length = 319

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 53/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W                   +Y K   I +                          
Sbjct: 150 ANPTWT-----------PTANTRARY-KAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|82544419|ref|YP_408366.1| hypothetical protein SBO_1948 [Shigella boydii Sb227]
 gi|81245830|gb|ABB66538.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|332094472|gb|EGI99521.1| lysM domain protein [Shigella boydii 3594-74]
          Length = 320

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 53/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W                   +Y K   I +                          
Sbjct: 151 ANPTWT-----------PTANTRARY-KAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|282934018|ref|ZP_06339304.1| peptidoglycan binding domain protein [Lactobacillus jensenii 208-1]
 gi|281301914|gb|EFA94172.1| peptidoglycan binding domain protein [Lactobacillus jensenii 208-1]
          Length = 311

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 10/101 (9%)

Query: 73  ETIAQTEKAIAFYQDILSRG-GWPELP-------IRPLHLGNSSVSVQRLRERLIISGDL 124
            TI    + +     I + G G+           I  +  G S   V+ ++      G +
Sbjct: 34  PTIYSLREGLQHELGISALGEGFGSSTKAALSNIINKIRPGYSGNIVKLIKGAFWCKG-I 92

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +P+   S ++ + + +AVK  Q   G+   G++    + A+
Sbjct: 93  NPTD-FSASYGSELTNAVKTLQSDAGITADGILTVQLMAAL 132


>gi|256851783|ref|ZP_05557171.1| YbfG [Lactobacillus jensenii 27-2-CHN]
 gi|260661955|ref|ZP_05862865.1| YbfG [Lactobacillus jensenii 115-3-CHN]
 gi|297205404|ref|ZP_06922800.1| YbfG like protein [Lactobacillus jensenii JV-V16]
 gi|256615741|gb|EEU20930.1| YbfG [Lactobacillus jensenii 27-2-CHN]
 gi|260547424|gb|EEX23404.1| YbfG [Lactobacillus jensenii 115-3-CHN]
 gi|297149982|gb|EFH30279.1| YbfG like protein [Lactobacillus jensenii JV-V16]
          Length = 709

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 10/101 (9%)

Query: 73  ETIAQTEKAIAFYQDILSRG-GWPELP-------IRPLHLGNSSVSVQRLRERLIISGDL 124
            TI    + +     I + G G+           I  +  G S   V+ ++      G +
Sbjct: 34  PTIYSLREGLQHELGISALGEGFGSSTKAALSNIINKIRPGYSGNIVKLIKGAFWCKG-I 92

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +P+   S ++ + + +AVK  Q   G+   G++    + A+
Sbjct: 93  NPTD-FSASYGSELTNAVKTLQSDAGITADGILTVQLMAAL 132


>gi|294811200|ref|ZP_06769843.1| Putative peptidoglycan binding protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294323799|gb|EFG05442.1| Putative peptidoglycan binding protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 332

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 1/66 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    R +  G+    V +L   L+  G       +   +D   E+AVK +Q       +
Sbjct: 85  PVPSFREMKPGDRGSDVLQLERNLVALGY-GGGLYVDPRYDRATEAAVKRWQKSLNRVVT 143

Query: 155 GMVDSS 160
           G V   
Sbjct: 144 GRVGEG 149


>gi|154685680|ref|YP_001420841.1| XlyB [Bacillus amyloliquefaciens FZB42]
 gi|154351531|gb|ABS73610.1| XlyB [Bacillus amyloliquefaciens FZB42]
          Length = 317

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +PL  G    +V++++  L            + G    +     +AVK FQ   GL   
Sbjct: 246 TKPLTKG---TNVKQVQNALSALYFYPDKGAKNHGADGVYGPKTANAVKRFQSVSGLTAD 302

Query: 155 GMVDSSTLE 163
           G+    T  
Sbjct: 303 GIYGPKTKA 311


>gi|332711580|ref|ZP_08431511.1| hypothetical protein LYNGBM3L_66650 [Lyngbya majuscula 3L]
 gi|332349558|gb|EGJ29167.1| hypothetical protein LYNGBM3L_66650 [Lyngbya majuscula 3L]
          Length = 241

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 52/153 (33%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           V+V++   ++      ++     V +G+    TP    +I R   NP W  P   I  ++
Sbjct: 117 VVVDLSDTTVYLYWGEQLLQSHPVAIGKPGWDTPTGSFKIIRKQPNPIWKEP---ITGEL 173

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
           +                                             PG  N +    I F
Sbjct: 174 IP--------------------------------------------PGPDNPLGERWIGF 189

Query: 316 YSR--NNTYMHDTPEPILFNNVVRFETSGCVRV 346
           +S   +   +H T E  L        + GC+R+
Sbjct: 190 WSDGHHQIGLHGTDEEELIGK---AVSHGCLRM 219


>gi|114775654|ref|ZP_01451222.1| hypothetical protein SPV1_04978 [Mariprofundus ferrooxydans PV-1]
 gi|114553765|gb|EAU56146.1| hypothetical protein SPV1_04978 [Mariprofundus ferrooxydans PV-1]
          Length = 533

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 13/82 (15%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-----PSGMVDSSTLE 163
             ++ +R RL + G L+   G   A    + SA+  FQ    L        G V   T  
Sbjct: 70  SRLRTIRNRLFLLGYLERDSGR-AALGPQLMSAITAFQQDARLSVASFVVDGWVGEQTWA 128

Query: 164 AMN--VPVDLRIRQLQVNLMRI 183
           A+   V  +  +      + R 
Sbjct: 129 ALQELVSFEQPLD-----MERW 145


>gi|308050969|ref|YP_003914535.1| peptidoglycan-binding domain 1 protein [Ferrimonas balearica DSM
           9799]
 gi|307633159|gb|ADN77461.1| Peptidoglycan-binding domain 1 protein [Ferrimonas balearica DSM
           9799]
          Length = 512

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 4/120 (3%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLG-- 105
            ++    + A ++   D     + ++    +   +  +        W      P  +G  
Sbjct: 380 DDNNRVFYAALLEQDGDQYRMALGEQQFWASADWLNQHYRGRYTVLWAPPSGLPGLIGPD 439

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++S  VQ L  RL           L   FD  +E+ ++ FQ + GLD  G+    TLE +
Sbjct: 440 SASAQVQWLENRLAQVQ--QRPARLLSGFDRQLEADLRGFQRQQGLDIDGLAGRQTLERL 497


>gi|94502083|ref|ZP_01308587.1| general secretion pathway protein A [Oceanobacter sp. RED65]
 gi|94425794|gb|EAT10798.1| general secretion pathway protein A [Oceanobacter sp. RED65]
          Length = 464

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 15/87 (17%)

Query: 94  WPELPIRPL--HLGNSSVSVQRLRERLIIS-GDLDPSKGLSVA------------FDAYV 138
           WP    + +         +V  +R+ LI   G    +    V             FD  +
Sbjct: 366 WPFAFPKSVVVEPNEYHEAVSWVRQSLIQLQGQASLADDWEVIRPANSAQIRRNFFDPLL 425

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           E  V+ FQ  + L   G++ S T+ A+
Sbjct: 426 EDQVRQFQSDYALRVDGIIGSQTIMAL 452


>gi|220933023|ref|YP_002509931.1| ErfK/YbiS/YcfS/YnhG family protein [Halothermothrix orenii H 168]
 gi|219994333|gb|ACL70936.1| ErfK/YbiS/YcfS/YnhG family protein [Halothermothrix orenii H 168]
          Length = 263

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G + +SV +L++ L   G       +   +      AVK  + + GL   G+ D S 
Sbjct: 197 LKPGMTGLSVMQLQDNLREYGF--NPGYMDARYGPTTVEAVKELESQFGLKVDGIADWSV 254

Query: 162 LEAMNVPVD 170
           L  +N+P D
Sbjct: 255 LYILNLPDD 263


>gi|297687615|ref|XP_002821303.1| PREDICTED: matrix metalloproteinase-21-like [Pongo abelii]
          Length = 569

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 43/126 (34%), Gaps = 25/126 (19%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              +    + ++     D       P+   + IA    A    Q  LSR GW  +     
Sbjct: 15  WLAAPWPTQPESLFHSRDRSDLEPSPLRQAKPIADLHGA----QRFLSRYGWSGVRA--- 67

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                  S         + G  +  KG      A +  AV+ FQ  + L  SG +D +TL
Sbjct: 68  ---AWGPS---------LEGPPETPKG------AALAEAVRRFQRANALPASGELDVATL 109

Query: 163 EAMNVP 168
             MN P
Sbjct: 110 ATMNRP 115


>gi|239997099|ref|ZP_04717623.1| hypothetical protein AmacA2_21857 [Alteromonas macleodii ATCC
           27126]
          Length = 39

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           V  VY +A++ +   I FR D Y  D+  +  +
Sbjct: 1   VLIVYFTAFADEAGTIVFRRDAYNRDSYIIEKL 33


>gi|169632913|ref|YP_001706649.1| hypothetical protein ABSDF1149 [Acinetobacter baumannii SDF]
 gi|169151705|emb|CAP00498.1| conserved hypothetical protein; putative exported protein
           [Acinetobacter baumannii]
          Length = 418

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 81/250 (32%), Gaps = 58/250 (23%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 170 KAIASFQQMNGLSPTGELTKETWDAL-VAKQNKPAFIEYTI------TDADLKGPYAQ-S 221

Query: 200 IP-AASLEAVENGKVGLRSTV--IVG----------RVDRQTPILHSRINRIMFNPYWVI 246
           IP   +L+    G     + V  ++G          +    T        +I+  P   +
Sbjct: 222 IPSDYALQVKMKG--LYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKIIV-P--NV 276

Query: 247 ----PRSIIQKDMMALLRQDPQYLKDNNIHMIDEK----GKEVFVEEV-----------D 287
               P  I    ++A       YL ++   MI       G                    
Sbjct: 277 RNDLPEDIHL--IIAHKGAKQLYLFNSRNQMIASFPATIGSTETPSPTGTYKVVGVARNP 334

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I   S+ +  +H TP P L +      +
Sbjct: 335 WYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTT---S 390

Query: 341 SGCVRVRNII 350
            GC+R+ N  
Sbjct: 391 HGCIRLTNWD 400


>gi|323704753|ref|ZP_08116330.1| carboxyl-terminal protease [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535679|gb|EGB25453.1| carboxyl-terminal protease [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 453

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           + I  +  G++  +V+ L+  L + G        +  F      A+  FQ   G+  +G+
Sbjct: 363 IYINDVKKGDTGYNVKLLQSYLSLLGYYKGEP--NGYFGNDTYDALISFQKYAGIPATGV 420

Query: 157 VDSSTLEAM 165
           +D  T++A+
Sbjct: 421 MDRGTVDAL 429


>gi|126658355|ref|ZP_01729504.1| hypothetical protein CY0110_27385 [Cyanothece sp. CCY0110]
 gi|126620287|gb|EAZ91007.1| hypothetical protein CY0110_27385 [Cyanothece sp. CCY0110]
          Length = 191

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 50/166 (30%), Gaps = 52/166 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             V++N+    +   ++ +V     V +G+   +TP     + +++ +P W         
Sbjct: 66  TRVVLNLKERKVYVYQDDQVIANYPVAIGKPGWETPRGEFSVIQMVEDPQW--------- 116

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                  ++P                 V                     G  + +    I
Sbjct: 117 -------KNP-------------WNGRVS------------------AAGPNSPLGERWI 138

Query: 314 EFYSRNNTY--MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            F+     Y   H TP   +        + GCVR+RN     ++ L
Sbjct: 139 GFWREGGKYIGFHGTPGEHVMGQ---AVSHGCVRMRNQDVKALYEL 181


>gi|330881024|gb|EGH15173.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 154

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +L        +++N+    +     G+ V     + VGR    +PI  +++     NP
Sbjct: 89  RFILPPGPREG-IVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNP 147

Query: 243 YWVIPRS 249
            W  P S
Sbjct: 148 TWTPPAS 154


>gi|218289273|ref|ZP_03493508.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240621|gb|EED07801.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 339

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 16/93 (17%)

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
           E AV  F+ +H L   G+     + A+         Q   +       +  ++   Y+LV
Sbjct: 173 EGAVMAFESQHHLAVDGIAGPDVIHAL--------SQALASGE-----MAPQVPYSYILV 219

Query: 199 --NIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             ++P  +LE   NGK+ L+S    G     TP
Sbjct: 220 TTSLPE-TLELWVNGKLVLKSLCNTGIPQAPTP 251


>gi|302849927|ref|XP_002956492.1| hypothetical protein VOLCADRAFT_121539 [Volvox carteri f.
           nagariensis]
 gi|300258190|gb|EFJ42429.1| hypothetical protein VOLCADRAFT_121539 [Volvox carteri f.
           nagariensis]
          Length = 655

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 8/78 (10%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           +L+RG    +P   L  G     V +L+  L   G       +   F    E+AVK FQ 
Sbjct: 345 MLARG--EAVPESGLEAG----EVMQLQRYLHKYGWYGGE--VDGYFGPATEAAVKRFQE 396

Query: 148 RHGLDPSGMVDSSTLEAM 165
            + L   G+   +T   M
Sbjct: 397 FYHLKVDGIAGPATRSLM 414


>gi|292670157|ref|ZP_06603583.1| endopeptidase [Selenomonas noxia ATCC 43541]
 gi|292648109|gb|EFF66081.1| endopeptidase [Selenomonas noxia ATCC 43541]
          Length = 245

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G     V  L++ L  +G     K     F    E AV  FQ  + +  +G+V+++
Sbjct: 27  TLREGAHGHDVLILQQALQKAGY--KIKNADGVFGKDTERAVAEFQRDNKIKITGVVNNA 84

Query: 161 TLEAMNVPVDLR 172
           T  A+      R
Sbjct: 85  TWRALKNAPSTR 96


>gi|293409479|ref|ZP_06653055.1| ycfS protein [Escherichia coli B354]
 gi|291469947|gb|EFF12431.1| ycfS protein [Escherichia coli B354]
          Length = 321

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 93  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 151

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I                                 + +D  +  P      
Sbjct: 152 ANPTWTPTANI-----------------RARYK----------AQGIDLPAVVP------ 178

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 179 --AGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 223


>gi|325122922|gb|ADY82445.1| ATP synthase [Acinetobacter calcoaceticus PHEA-2]
          Length = 412

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 64/253 (25%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 164 KAISSFQQMNGLSPTGELTKETWDAL-VAKQTKPAFIEYTI------SDADLKGPYAE-S 215

Query: 200 IP-AASLEAVENGKVGLRSTV--IVG----------RVDRQTPILHSRINRIMFNPYWVI 246
           IP   +L+A   G     + V  ++G          +    T        +I+      +
Sbjct: 216 IPSDYALQAKMKG--LYYTRVSEMLGEKFHIDEAFLKKINPTATFKKAGEKII------V 267

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEV------------------ 286
           P   ++ D+   +     +     +++ + + + +  F   +                  
Sbjct: 268 PN--VRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVA 325

Query: 287 --DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
              W S  P NF            PG    + +  I   S+ +  +H TP P L +    
Sbjct: 326 RNPWYSYSPSNFVQGKNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTA- 383

Query: 338 FETSGCVRVRNII 350
             + GC+R+ N  
Sbjct: 384 --SHGCIRLTNWD 394


>gi|295838581|ref|ZP_06825514.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Streptomyces sp. SPB74]
 gi|295827071|gb|EDY44726.2| ErfK/YbiS/YcfS/YnhG superfamily protein [Streptomyces sp. SPB74]
          Length = 196

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 14/123 (11%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM--NVPVD 170
            L+ RL   G        +  F      A+  FQ   GL  SG++D+ T   +    P  
Sbjct: 3   ALQARLWSLGFFRQQP--TGYFGEVTARALAAFQRDRGLGASGVLDAVTWGRLRAAGPAP 60

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRY-----VLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
            +       L     L       R      + V+  + +L  + +G+V     V  G   
Sbjct: 61  TKAE-----LYPETTLPPTDPDPRCRTGRALCVSKKSRTLSWMVDGRVVSVMDVRFGSAY 115

Query: 226 RQT 228
             T
Sbjct: 116 TPT 118


>gi|149182876|ref|ZP_01861336.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. SG-1]
 gi|148849435|gb|EDL63625.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. SG-1]
          Length = 296

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G +   V  L+ RL   G  +    +   F      AV+ FQ   GL   G+V   T
Sbjct: 45  IQKGATGDDVIELQSRLQYIGYYNG--NIDGVFGWGTYWAVRNFQYEFGLPIDGLVGQET 102

Query: 162 LEAM 165
            + +
Sbjct: 103 KDKL 106


>gi|326439844|ref|ZP_08214578.1| hypothetical protein SclaA2_02210 [Streptomyces clavuligerus ATCC
           27064]
          Length = 356

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 1/66 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    R +  G+    V +L   L+  G       +   +D   E+AVK +Q       +
Sbjct: 109 PVPSFREMKPGDRGSDVLQLERNLVALGY-GGGLYVDPRYDRATEAAVKRWQKSLNRVVT 167

Query: 155 GMVDSS 160
           G V   
Sbjct: 168 GRVGEG 173


>gi|254411200|ref|ZP_05024977.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181701|gb|EDX76688.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 282

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 8/116 (6%)

Query: 52  FDNFLARVDMGIDSDIPIISKETI-AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVS 110
               L R+ +      P+    +  A T+ A+  +Q I+          +   + N  ++
Sbjct: 160 LQKALNRLKIRSPKGTPLKEDGSNEADTKAALKTFQAIVGVTPTGTADAKTWQIINQILA 219

Query: 111 VQRLRERLIISGDLDP------SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           +  LRE    +G +               + +    AVK FQ + G+   G++ + 
Sbjct: 220 MPVLREN-HATGFVVKYLQRRIGATPDGIYGSGTAGAVKRFQQQQGITADGIIGAQ 274


>gi|119486197|ref|ZP_01620257.1| carboxypeptidase [Lyngbya sp. PCC 8106]
 gi|119456688|gb|EAW37817.1| carboxypeptidase [Lyngbya sp. PCC 8106]
          Length = 536

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 6/66 (9%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST-- 161
                  V++L+E L   G    + G    F    ++AV+ FQ   GL   G+V   T  
Sbjct: 204 PPMQGERVRQLQEDLANVGIAITADG---IFGKQTDAAVRKFQAEQGLQVDGIVGFVTQT 260

Query: 162 -LEAMN 166
            L+ +N
Sbjct: 261 KLDQLN 266


>gi|158321863|ref|YP_001514370.1| peptidoglycan binding domain-containing protein [Alkaliphilus
           oremlandii OhILAs]
 gi|158142062|gb|ABW20374.1| Peptidoglycan-binding domain 1 protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 762

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V+ L+  L   G    +  +  +F      AVK +Q ++GL   G V  
Sbjct: 42  RLLVKGSIGNDVKLLQTLLNNEG---ANLEVDGSFGPLTLKAVKEYQSKNGLKVDGFVGP 98

Query: 160 STLEAM 165
            T  ++
Sbjct: 99  LTRASL 104


>gi|330830587|ref|YP_004393539.1| general secretion pathway protein A [Aeromonas veronii B565]
 gi|328805723|gb|AEB50922.1| General secretion pathway protein A [Aeromonas veronii B565]
          Length = 522

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           L   +     FD  +++ ++ FQ   GL P G+  S+TL  +N
Sbjct: 466 LQQPERKVRRFDGELKNKLQQFQRDQGLTPDGIAGSNTLLRLN 508


>gi|302545808|ref|ZP_07298150.1| putative peptidoglycan-binding membrane protein [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302463426|gb|EFL26519.1| putative peptidoglycan-binding membrane protein [Streptomyces
           himastatinicus ATCC 53653]
          Length = 497

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 98  PIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS- 154
           P  P  L  G+S   V  L++RL     L         +D  V+ AV  +Q R+ +    
Sbjct: 421 PTGPPVLREGDSGAEVTELQKRLTQL--LIYIGVADGEYDDGVKDAVAAYQDRYDITGDP 478

Query: 155 -GMVDSSTL 162
            G+   +T 
Sbjct: 479 EGVYGENTR 487


>gi|295698357|ref|YP_003603012.1| LysM domain protein [Candidatus Riesia pediculicola USDA]
 gi|291157235|gb|ADD79680.1| LysM domain protein [Candidatus Riesia pediculicola USDA]
          Length = 319

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 55/167 (32%), Gaps = 40/167 (23%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + ++        +L+N+    L    +   +     V +G+ +  TP   ++I +++  P
Sbjct: 95  QMIIPNLKEDEDILINLAELRLYHFLKKKNIVSVYPVGIGQKEASTPTFEAKIIQMIKKP 154

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W IP   I+K                   +   K  EV    ++               
Sbjct: 155 IW-IPTKNIRK----------------RYELEGIKLPEVVPSGIN--------------- 182

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              N M    +        Y +H T E   F    R  TSGC+R+R 
Sbjct: 183 ---NPMGMYAMRLSYGKGEYLIHGTNEN--FGIGSR-VTSGCIRLRK 223


>gi|116492825|ref|YP_804560.1| periplasmic protease [Pediococcus pentosaceus ATCC 25745]
 gi|116102975|gb|ABJ68118.1| Periplasmic protease [Pediococcus pentosaceus ATCC 25745]
          Length = 472

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 47/96 (48%), Gaps = 12/96 (12%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   +G S+  ++ ++  L   G  D    +S  +   V+ AV+ +Q ++ L  +G VD+
Sbjct: 383 KTYSVGESNSDIKNIQIALKGLGYYD--DKISKEYTEKVKQAVEAYQEKNQLAVTGKVDA 440

Query: 160 STLEAM--NVPVDLRIRQLQVN---LMRIKKLLEQK 190
            T+ ++  NV     I+ L  N   L + +K++  +
Sbjct: 441 KTMRSIEQNV-----IKTLAKNDPALEKAQKVMNDE 471


>gi|95930333|ref|ZP_01313070.1| Peptidoglycan-binding domain 1 [Desulfuromonas acetoxidans DSM 684]
 gi|95133585|gb|EAT15247.1| Peptidoglycan-binding domain 1 [Desulfuromonas acetoxidans DSM 684]
          Length = 552

 Score = 47.1 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 26/72 (36%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      +        V  L ++L      +P    ++  +  +   ++ FQ   GL   
Sbjct: 465 PSAYSGAVPPDEEGPMVLWLEQQLAHLMQREPRPDATLRLNGLLLDELQQFQQSEGLAAD 524

Query: 155 GMVDSSTLEAMN 166
           G++   TL  +N
Sbjct: 525 GIIGPITLIHLN 536


>gi|302390075|ref|YP_003825896.1| carboxyl-terminal protease [Thermosediminibacter oceani DSM 16646]
 gi|302200703|gb|ADL08273.1| carboxyl-terminal protease [Thermosediminibacter oceani DSM 16646]
          Length = 473

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 7/101 (6%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    RPL  G   + V  L++ L   G  +        F+   + AV+ FQ + G   +
Sbjct: 370 PLKSTRPLKYGCIGLDVMGLQQHLRFLGLFNGEPDG--VFEQRTKKAVEDFQAKKGFPVN 427

Query: 155 GMVDSSTLEAMNVPVDLRIR-----QLQVNLMRIKKLLEQK 190
           G+ D   LEA++  V+  ++     QL+  L  +K LL +K
Sbjct: 428 GIADEKLLEALDGAVNEALKSREDLQLKKALEVLKGLLTEK 468


>gi|308173220|ref|YP_003919925.1| N-acetylmuramoyl-L-alanine amidase [Bacillus amyloliquefaciens DSM
           7]
 gi|307606084|emb|CBI42455.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus amyloliquefaciens DSM 7]
 gi|328553860|gb|AEB24352.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus amyloliquefaciens TA208]
 gi|328911284|gb|AEB62880.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus amyloliquefaciens LL3]
          Length = 317

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 7/69 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +PL  G    +V++++  L            + G    +     +AVK FQ   GL   
Sbjct: 246 TKPLTKG---TNVKQVQTALSALYFYPDKGAKNHGADGVYGPKTANAVKRFQSVSGLTAD 302

Query: 155 GMVDSSTLE 163
           G+    T  
Sbjct: 303 GIYGPKTKA 311


>gi|253578249|ref|ZP_04855521.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850567|gb|EES78525.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 512

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 49/189 (25%), Gaps = 60/189 (31%)

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV---GRVDRQTPILHSRINR 237
           MR        +G  Y+ V++    +   +NG +  +S ++    G  DR+T         
Sbjct: 371 MRANAHGINDLGDTYIEVDLTEQYMWYYQNGNIIFQSEIVSGLPGDPDRKT--------- 421

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
                    P  I                      +  +    V   E+  N      + 
Sbjct: 422 ---------PPGI--------------------FTLNSKSSPSVLRGEMTAN----GTYS 448

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE---TSGCVRV--RNIIDL 352
           + Q                       HD      F    R+    + GC+ +   N   L
Sbjct: 449 YEQP---------VTYWMPFNGGIGFHDADWQPYFGGD-RYLTGGSHGCINLPPENAGQL 498

Query: 353 DVWLLKDTP 361
              +  D P
Sbjct: 499 YSLIQYDVP 507


>gi|114566295|ref|YP_753449.1| hypothetical protein Swol_0756 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337230|gb|ABI68078.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 204

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V  L++ L   G    +      F A   +AV  FQ    L   G+V   T
Sbjct: 32  LQWGSRGNAVVELQKTLNNQGFWCGATDG--IFGAKTYNAVINFQKSKKLQVDGIVGPQT 89

Query: 162 LEAMNVPVDL 171
            +A+ +    
Sbjct: 90  KKALGLSTAT 99


>gi|117619278|ref|YP_857770.1| LysM domain-containing protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560685|gb|ABK37633.1| LysM domain protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 308

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 47/154 (30%), Gaps = 42/154 (27%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     GK V     + +G++   TP    +++ R   NP W    +I ++
Sbjct: 100 IVINVAEMRLYYYPKGKNVVQVLPIGIGQLGVNTPENWITKVERKRANPTWTPTENIRRR 159

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               + +          G  N M    +
Sbjct: 160 -----------------------------------YAAQGKTLPAVWPAGPDNPMGLHAL 184

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
              +      H T     F   +R  +SGCVR+R
Sbjct: 185 YIGNLYAI--HGTNAT--FGIGLR-VSSGCVRLR 213


>gi|39995294|ref|NP_951245.1| putative lipoprotein [Geobacter sulfurreducens PCA]
 gi|39982056|gb|AAR33518.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
 gi|298504297|gb|ADI83020.1| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, SPOR
           domain-containing [Geobacter sulfurreducens KN400]
          Length = 435

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 54/167 (32%)

Query: 189 QKMGLRYVLVNIPAASLEAV-ENGKV--GLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                + +++N+    L    ENG         V +G  +R TP   +R+ R    P W 
Sbjct: 115 PDAPRKGIVINLATMRLFQFKENGGALAVSTYPVGIGTKERPTPQGPTRVARKASRPTWY 174

Query: 246 IPRSII-----QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           +P SI      + D++                                          R 
Sbjct: 175 VPASIAEDHRKKGDILPA----------------------------------------RV 194

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
            PG  N +    +      + Y +H T +P          ++GC+R+
Sbjct: 195 PPGPENPLGDYALYL--SRSGYLIHGTNKPASIGLKA---SNGCMRL 236


>gi|242062568|ref|XP_002452573.1| hypothetical protein SORBIDRAFT_04g028370 [Sorghum bicolor]
 gi|241932404|gb|EES05549.1| hypothetical protein SORBIDRAFT_04g028370 [Sorghum bicolor]
          Length = 368

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           H+G     +  L++ L   G L P       S AFD  +ESA+  +Q   GL+ +G +D+
Sbjct: 52  HMGEERQGLAGLKDYLSHFGYLPPPPPSSPFSDAFDQDLESAIATYQRNFGLNATGALDA 111

Query: 160 STLEAMNVP 168
           ST+  M  P
Sbjct: 112 STVSQMVSP 120


>gi|149371059|ref|ZP_01890654.1| hypothetical protein SCB49_05220 [unidentified eubacterium SCB49]
 gi|149355845|gb|EDM44403.1| hypothetical protein SCB49_05220 [unidentified eubacterium SCB49]
          Length = 222

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +P   L  G+S+ +V+ L++ L+       S      F    E A+K FQ  + +   G
Sbjct: 149 TIPSGYLRKGDSNENVKMLQKILLKLNYSPGSADG--IFGLKTEVALKEFQEANNITIDG 206

Query: 156 MVDSSTLE 163
           +  S T +
Sbjct: 207 IYGSETRQ 214


>gi|125541078|gb|EAY87473.1| hypothetical protein OsI_08881 [Oryza sativa Indica Group]
          Length = 372

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           H G     + RL++ L   G L P       S AFD  +E+A+  +Q   GL+ +G +D+
Sbjct: 54  HAGEEREGLGRLKDYLSHFGYLPPPPSSSPYSDAFDDSLEAAIAAYQRNFGLNATGELDT 113

Query: 160 STLEAMNVP 168
            T++ M  P
Sbjct: 114 DTVDQMVAP 122


>gi|145298061|ref|YP_001140902.1| LysM domain-containing protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850833|gb|ABO89154.1| LysM domain protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 302

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 42/154 (27%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     GK  +    + +G++   TP    +++ R   NP W    +I ++
Sbjct: 100 IVINVAEMRLYYYPKGKNVVEVLPIGIGQLGVNTPENWITKVERKRANPTWTPTENIRRR 159

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               + +          G  N M    +
Sbjct: 160 -----------------------------------YAAQGKTLPAVWPAGPDNPMGLHAL 184

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
              +      H T     F   +R  +SGCVR+R
Sbjct: 185 YIGNLYAI--HGTNAT--FGIGLR-VSSGCVRLR 213


>gi|113475770|ref|YP_721831.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101]
 gi|110166818|gb|ABG51358.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101]
          Length = 219

 Score = 47.1 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 44/153 (28%), Gaps = 54/153 (35%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +   +N ++     + +G+   +TP    ++ + + NP W  P +    +++       
Sbjct: 103 RVYVYKNDQLKTSYPIAIGKEGWETPTGTHKVIQKIPNPSWTHPFT---GEIIP------ 153

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--TKIEFYSRNNT 321
                                                 PG  N +            N  
Sbjct: 154 --------------------------------------PGPENPLGERWIGFWTDGTNYI 175

Query: 322 YMHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
             H TP            + GCVR+  ++++DL
Sbjct: 176 GFHGTPNEETVGQ---AASHGCVRMFNQDVLDL 205


>gi|115448591|ref|NP_001048075.1| Os02g0740700 [Oryza sativa Japonica Group]
 gi|46390313|dbj|BAD15762.1| putative zinc metalloproteinase [Oryza sativa Japonica Group]
 gi|113537606|dbj|BAF09989.1| Os02g0740700 [Oryza sativa Japonica Group]
          Length = 372

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           H G     + RL++ L   G L P       S AFD  +E+A+  +Q   GL+ +G +D+
Sbjct: 54  HAGEEREGLGRLKDYLSHFGYLPPPPSSSPYSDAFDDSLEAAIAAYQRNFGLNATGELDT 113

Query: 160 STLEAMNVP 168
            T++ M  P
Sbjct: 114 DTVDQMVAP 122


>gi|293609704|ref|ZP_06692006.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828156|gb|EFF86519.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 415

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 64/253 (25%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 167 KAISSFQQMNGLSPTGELTKETWDAL-VAKQTKPAFIEYTI------SDADLKGPYAE-S 218

Query: 200 IP-AASLEAVENGKVGLRSTV--IVG----------RVDRQTPILHSRINRIMFNPYWVI 246
           IP   +L+A   G     + V  ++G          +    T        +I+      +
Sbjct: 219 IPSDYALQAKMKG--LYYTRVSEMLGEKFHIDEAFLKKINPTATFKKAGEKII------V 270

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEV------------------ 286
           P   ++ D+   +     +     +++ + + + +  F   +                  
Sbjct: 271 PN--VRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVA 328

Query: 287 --DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
              W S  P NF            PG    + +  I   S+ +  +H TP P L +    
Sbjct: 329 RNPWYSYSPSNFVQGKNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTA- 386

Query: 338 FETSGCVRVRNII 350
             + GC+R+ N  
Sbjct: 387 --SHGCIRLTNWD 397


>gi|125583634|gb|EAZ24565.1| hypothetical protein OsJ_08327 [Oryza sativa Japonica Group]
          Length = 372

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           H G     + RL++ L   G L P       S AFD  +E+A+  +Q   GL+ +G +D+
Sbjct: 54  HAGEEREGLGRLKDYLSHFGYLPPPPSSSPYSDAFDDSLEAAIAAYQRNFGLNATGELDT 113

Query: 160 STLEAMNVP 168
            T++ M  P
Sbjct: 114 DTVDQMVAP 122


>gi|28393482|gb|AAO42162.1| putative proteinase [Arabidopsis thaliana]
          Length = 364

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G+    V  L+  L   G + D S+  S  FD  +ESA+ L+Q   GL  +G +D+ST
Sbjct: 62  QIGSHVSGVSELKRYLHRFGYVNDGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTST 121

Query: 162 LEAMNVP 168
           +  M++P
Sbjct: 122 VTLMSLP 128


>gi|53804647|ref|YP_113750.1| N-acetylmuramoyl-L-alanine amidase domain/peptidoglycan binding
           domain-containing protein [Methylococcus capsulatus str.
           Bath]
 gi|53758408|gb|AAU92699.1| N-acetylmuramoyl-L-alanine amidase domain/peptidoglycan binding
           domain protein [Methylococcus capsulatus str. Bath]
          Length = 617

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFD---AYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +  +V  +++ L   G +     LS A+    +   +AV+ FQ   GL  SG VD +TL 
Sbjct: 291 TGDAVGAIQDLLSGHGHIGLPCLLSAAYGRFGSKTAAAVQDFQTGQGLSASGEVDVATLR 350

Query: 164 AMNVPVDLRIRQLQVNLM 181
           A+      + R  QV L 
Sbjct: 351 ALVRTPAAKPRISQVYLE 368


>gi|333027471|ref|ZP_08455535.1| hypothetical protein STTU_4975 [Streptomyces sp. Tu6071]
 gi|332747323|gb|EGJ77764.1| hypothetical protein STTU_4975 [Streptomyces sp. Tu6071]
          Length = 317

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-G 155
           +    L  G+S   V +L ERL   G           FD  +E A+  +Q+  G     G
Sbjct: 242 VTQAVLRRGDSGPEVAKLEERLRAVGIYPGRDDG--RFDRGLEYALMTYQVTRGASDEHG 299

Query: 156 MVDSSTLEAM 165
           +  + T   +
Sbjct: 300 VYGADTRTKL 309


>gi|304436665|ref|ZP_07396634.1| endopeptidase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370361|gb|EFM24017.1| endopeptidase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 245

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L+  L  +G     K +   F    E AV  FQ  + +  +G+V+++
Sbjct: 27  TLREGSHGHDVLVLQRALQNAGY--QIKSIDGNFGKETEHAVAAFQRDNKIKITGVVNNA 84

Query: 161 TLEAMNVPVDLR 172
           T  A+      R
Sbjct: 85  TWRALRNAPAKR 96


>gi|302518748|ref|ZP_07271090.1| predicted protein [Streptomyces sp. SPB78]
 gi|302427643|gb|EFK99458.1| predicted protein [Streptomyces sp. SPB78]
          Length = 317

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-G 155
           +    L  G+S   V +L ERL   G           FD  +E A+  +Q+  G     G
Sbjct: 242 VTQAVLRRGDSGPEVAKLEERLRAVGIYPGRDDG--RFDRGLEYALMTYQVTRGASDEHG 299

Query: 156 MVDSSTLEAM 165
           +  + T   +
Sbjct: 300 VYGADTRTKL 309


>gi|330838933|ref|YP_004413513.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC
           35185]
 gi|329746697|gb|AEC00054.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC
           35185]
          Length = 409

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 8/93 (8%)

Query: 188 EQKMGLRY-VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            +K G  Y +++N+ A SL   +N +      V +G++   TP+ +  +     NP WV 
Sbjct: 60  AEKTGDPYKIIINVAARSLGVYKNNEKIRLYPVGLGKLSTPTPVGYFSVLTKEENPTWVD 119

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           P     K+ +     +P          +   G 
Sbjct: 120 PGD--SKNTIPSGEGNP-----LGYRWMQVWGN 145


>gi|260887313|ref|ZP_05898576.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC
           35185]
 gi|260862949|gb|EEX77449.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC
           35185]
          Length = 429

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 8/93 (8%)

Query: 188 EQKMGLRY-VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            +K G  Y +++N+ A SL   +N +      V +G++   TP+ +  +     NP WV 
Sbjct: 80  AEKTGDPYKIIINVAARSLGVYKNNEKIRLYPVGLGKLSTPTPVGYFSVLTKEENPTWVD 139

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           P     K+ +     +P          +   G 
Sbjct: 140 PGD--SKNTIPSGEGNP-----LGYRWMQVWGN 165


>gi|269124313|ref|YP_003297683.1| peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
 gi|268309271|gb|ACY95645.1| Peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
          Length = 332

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS---GMVD 158
           L  G++   V+ L+  L+ +G+  P  G+   F A  E+AV+ FQ +H  +     G   
Sbjct: 171 LKRGDTGDRVRDLQSALLKAGERLPEYGVDGDFGAETEAAVRSFQSKHPDEVDRVTGRYG 230

Query: 159 SSTLEAM 165
             T  A+
Sbjct: 231 PQTAAAL 237


>gi|56421627|ref|YP_148945.1| carboxyl-terminal processing protease [Geobacillus kaustophilus
           HTA426]
 gi|56381469|dbj|BAD77377.1| carboxyl-terminal processing protease [Geobacillus kaustophilus
           HTA426]
          Length = 482

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +PL    +   +   ++ L   G  +P +     F    E AV+ FQ  + L  +G +D 
Sbjct: 392 KPLRYDMNDEQIANAQKMLKGLGF-NPGRTDG-YFSKETEQAVQAFQKANQLPVTGRIDE 449

Query: 160 STLEAM 165
           +T +A+
Sbjct: 450 ATADAL 455


>gi|150390170|ref|YP_001320219.1| peptidoglycan binding domain-containing protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149950032|gb|ABR48560.1| Peptidoglycan-binding domain 1 protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 148

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +A+K FQ  + L   G+V   T +A+
Sbjct: 121 AAIKAFQKDNDLTVDGIVGPQTRKAL 146


>gi|260904990|ref|ZP_05913312.1| N-acetymuramyl-L-alanine amidase [Brevibacterium linens BL2]
          Length = 354

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 10/97 (10%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++ KET  + E+A     D + R      P+R L    +   V RL+  L   G    + 
Sbjct: 38  VMGKETFTELERARYQLGDRVLRYD----PVRVL----TGDDVLRLQRTLAGLGFY--AG 87

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   + A  ++AVK  QM  G    G+    TL  +
Sbjct: 88  RMDAEYSAVTDAAVKELQMSLGTKVDGIAGPQTLRGL 124



 Score = 43.3 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   G L+     S  FD   E  V+ FQ   G+   G++   T   +
Sbjct: 1   MARLG-LNVGDTDSDEFDRAFELGVRQFQQVRGILCDGVMGKETFTEL 47


>gi|21553383|gb|AAM62476.1| proteinase like protein [Arabidopsis thaliana]
          Length = 364

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G+    V  L+  L   G + D S+  S  FD  +ESA+ L+Q   GL  +G +D+ST
Sbjct: 62  QIGSHVSGVSELKRYLHRFGYVKDGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTST 121

Query: 162 LEAMNVP 168
           +  M++P
Sbjct: 122 VTLMSLP 128


>gi|15235820|ref|NP_193397.1| matrix metalloproteinase, putative [Arabidopsis thaliana]
 gi|2245019|emb|CAB10439.1| proteinase like protein [Arabidopsis thaliana]
 gi|7268414|emb|CAB78706.1| proteinase like protein [Arabidopsis thaliana]
 gi|332658379|gb|AEE83779.1| matrix metalloprotease domain-containing protein [Arabidopsis
           thaliana]
          Length = 364

 Score = 46.8 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G+    V  L+  L   G + D S+  S  FD  +ESA+ L+Q   GL  +G +D+ST
Sbjct: 62  QIGSHVSGVSELKRYLHRFGYVNDGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTST 121

Query: 162 LEAMNVP 168
           +  M++P
Sbjct: 122 VTLMSLP 128


>gi|323963704|gb|EGB59214.1| peptidase M23 [Escherichia coli M863]
 gi|327254961|gb|EGE66571.1| putative peptidoglycan binding domain protein [Escherichia coli
           STEC_7v]
          Length = 253

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 114 LRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           LR  L ++G ++ +  +      F      AVK+FQ  +GL+  G+V   T   + VP
Sbjct: 6   LRFTLSVAGIVEMATAVVVEDGIFGKNTYDAVKIFQRYNGLNDDGIVGPQTWRKLGVP 63


>gi|323518861|gb|ADX93242.1| hypothetical protein ABTW07_2818 [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 415

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 91/284 (32%), Gaps = 78/284 (27%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 167 KAIASFQQMNGLSPTGELTKETWDAL-VAKQNKPAFIEYTI------TDADLKGPYAQ-S 218

Query: 200 IP-AASLEAVENGKVGLRSTV--IVG----------RVDRQTPILHSRINRIMFNPYWVI 246
           IP   +L+A   G     + V  ++G          +    T        +I+      +
Sbjct: 219 IPSDYALQAKMKG--LYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKII------V 270

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEV------------------ 286
           P   ++ D+   +     +     +++ + + + +  F   +                  
Sbjct: 271 PN--VRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVA 328

Query: 287 --DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
              W S  P NF            PG    + +  I   S+ +  +H TP P L +    
Sbjct: 329 RNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTA- 386

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
             + GC+R+ N              W    +   V++  T    
Sbjct: 387 --SHGCIRLTN--------------WDANDLGNKVRSGVTVKFS 414


>gi|319764568|ref|YP_004128505.1| peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans BC]
 gi|317119129|gb|ADV01618.1| Peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans BC]
          Length = 342

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           PE   + L     S  V+ L+ RL  +  L     +   +       V+ FQ  HGL  +
Sbjct: 44  PEPLAQELRHRMESPLVRELQVRLRHANYLALYD-VDDRYGLKTRETVRKFQKDHGLRET 102

Query: 155 GMVDSSTLEAM 165
           G+VD +T + +
Sbjct: 103 GVVDQATWDRL 113


>gi|326202807|ref|ZP_08192674.1| spore cortex-lytic enzyme [Clostridium papyrosolvens DSM 2782]
 gi|325986884|gb|EGD47713.1| spore cortex-lytic enzyme [Clostridium papyrosolvens DSM 2782]
          Length = 231

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G++   V+ +++ L   G  D        +D     +V  +Q ++GL  +G+ 
Sbjct: 30  SAPSLKIGDNGDKVKDMQQELKNWGYFDGQVDGRFGYD--TLRSVLNYQRQYGLKANGVA 87

Query: 158 DSSTLEAMNVPVDLRIRQLQVNL 180
           D +TL  + + +   I    VN 
Sbjct: 88  DRTTL--LTMGLAELIESGTVNA 108


>gi|138895808|ref|YP_001126261.1| sporulation specific N-acetylmuramoyl-L-alanineamidase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134267321|gb|ABO67516.1| Sporulation specific N-acetylmuramoyl-L-alanineamidase, spore
           cortex-lytic enzyme [Geobacillus thermodenitrificans
           NG80-2]
          Length = 263

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 2/75 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            G       + +  G     V  L+ RL   G       +   F      A++ FQ ++G
Sbjct: 20  AGDAAAFSPQVIQRGAVGDDVIELQARLQYLGFYKG--KIDGVFGWGTYWALRNFQQKYG 77

Query: 151 LDPSGMVDSSTLEAM 165
           L   G+  + T   +
Sbjct: 78  LPVDGLAGAETKRKL 92


>gi|196248696|ref|ZP_03147396.1| spore cortex-lytic enzyme [Geobacillus sp. G11MC16]
 gi|196211572|gb|EDY06331.1| spore cortex-lytic enzyme [Geobacillus sp. G11MC16]
          Length = 263

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 2/75 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            G       + +  G     V  L+ RL   G       +   F      A++ FQ ++G
Sbjct: 20  AGDAAAFSPQVIQRGAVGDDVIELQARLQYLGFYKG--KIDGVFGWGTYWALRNFQQKYG 77

Query: 151 LDPSGMVDSSTLEAM 165
           L   G+  + T   +
Sbjct: 78  LPVDGLAGAETKRKL 92


>gi|182433829|ref|YP_001821548.1| hypothetical protein SGR_36t [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|182440894|ref|YP_001828613.1| hypothetical protein SGR_7103t [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178462345|dbj|BAG16865.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178469410|dbj|BAG23930.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 142

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+ ++  LI  G       +   F     +AV  FQ   GLD  G+V ++T   
Sbjct: 80  GDTGDRVREIQCLLIFKGF--GVGAVDGDFGPATRTAVVAFQKNRGLDYDGIVGANTWRK 137

Query: 165 MNV 167
           + V
Sbjct: 138 LRV 140


>gi|157145092|ref|YP_001452411.1| hypothetical protein CKO_00823 [Citrobacter koseri ATCC BAA-895]
 gi|157082297|gb|ABV11975.1| hypothetical protein CKO_00823 [Citrobacter koseri ATCC BAA-895]
          Length = 310

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 61/198 (30%), Gaps = 49/198 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L    + G       + +G   R+TP    + + R    P W  P +  ++
Sbjct: 99  IVVNVAEMRLYYYPKGGDTVDVLPIGIGEAGRETPRNWVTAVERKQEAPSWT-PTANTRR 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +        P ++                                    G  N M    I
Sbjct: 158 EYAKRGESLPAFV----------------------------------PAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI----- 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I     
Sbjct: 184 YIGKLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQIIDQPL 236

Query: 369 EEVVKTRKTTPVKLATEV 386
           +  V+   +  +++   +
Sbjct: 237 KTTVEADGSRWIEVHEPL 254


>gi|148264215|ref|YP_001230921.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
 gi|146397715|gb|ABQ26348.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
          Length = 439

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGK---VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                + ++VN+    L   +      V     V VG  +R TP     + R    P W 
Sbjct: 119 PDAPRKGIVVNLATMRLFQFKGDSKSLVVSTYPVGVGTKERPTPTGQMHVERKATRPTWH 178

Query: 246 IPRSI 250
           +P SI
Sbjct: 179 VPASI 183


>gi|150390862|ref|YP_001320911.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149950724|gb|ABR49252.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 332

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 39/131 (29%), Gaps = 17/131 (12%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS---TLEAM-NVPVDLRI 173
           L   G            D    +A+  FQ  H L   G+        L A+ N      +
Sbjct: 49  LKTLGYFHEDTKQQ---DINKRNAIIRFQSEHNLTVDGIYGPQSETVLSALVNGSERRYL 105

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
             +           +     +++ +N     L   E  KV  +  V  G+    TP    
Sbjct: 106 DVID----------QPPTKGKWMTINKTKRILTLYEGDKVMKKYPVAQGKEPGLTPEGKF 155

Query: 234 RINRIMFNPYW 244
            I   + NP W
Sbjct: 156 TIVNKLVNPGW 166


>gi|254423217|ref|ZP_05036935.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335]
 gi|196190706|gb|EDX85670.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335]
          Length = 202

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 40/140 (28%), Gaps = 52/140 (37%)

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           GK  +R  V VG+   QTPI    +  ++  P W  P  + ++D+               
Sbjct: 93  GKPTIRYEVAVGQSAWQTPIGSFEVTSMIEQPTWQHP--LTKEDI--------------- 135

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--TKIEFYSRNNTYMHDTPE 328
                                          PG  N +           +     H T +
Sbjct: 136 ------------------------------PPGPDNPLGDRWIGFWTDGKAQIGFHGTNQ 165

Query: 329 PILFNNVVRFETSGCVRVRN 348
             L        + GCVR+RN
Sbjct: 166 EELIGQ---AVSHGCVRMRN 182


>gi|300863730|ref|ZP_07108662.1| ErfK/YbiS/YcfS/YnhG-like protein [Oscillatoria sp. PCC 6506]
 gi|300338298|emb|CBN53808.1| ErfK/YbiS/YcfS/YnhG-like protein [Oscillatoria sp. PCC 6506]
          Length = 213

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 45/152 (29%), Gaps = 52/152 (34%)

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
                 ++     V VG+   +TP  + ++ +++  P W  P +    +++         
Sbjct: 99  YVYRKNELQTSFPVAVGKDGWETPTGNFKVMQMIREPSWEHPWT---GEVVP-------- 147

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--TKIEFYSRNNTYM 323
                                               PG  N + S         +N    
Sbjct: 148 ------------------------------------PGPDNPLGSRWIGFWTDGKNVIGF 171

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           H TP P    ++ R  + GCVR+ +     ++
Sbjct: 172 HGTPNP---ESIGRPASHGCVRMYDKDAQALF 200


>gi|257069799|ref|YP_003156054.1| putative peptidoglycan-binding domain-containing protein
           [Brachybacterium faecium DSM 4810]
 gi|256560617|gb|ACU86464.1| putative peptidoglycan-binding domain-containing protein
           [Brachybacterium faecium DSM 4810]
          Length = 254

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 2/72 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+    V+ L++ L        +   S  F    + AV   Q   GL   G+V   T 
Sbjct: 60  RRGDRGAGVKSLQQDLADLRYWLGAVDGS--FGHNTQQAVYALQKAAGLAKDGVVGPKTY 117

Query: 163 EAMNVPVDLRIR 174
            A++  V  + R
Sbjct: 118 SALSRGVQPKRR 129


>gi|291298292|ref|YP_003509570.1| zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
           44728]
 gi|290567512|gb|ADD40477.1| Zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
           44728]
          Length = 263

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G +   V++L+ R+    +      +   F     +AVK FQ  +GL  +G  D+
Sbjct: 47  RDLASGATGDDVKQLQIRVFGYPEYGKQLAVDGQFGPATTAAVKRFQQAYGLSQTGKGDA 106

Query: 160 STLE 163
           +T  
Sbjct: 107 ATYA 110


>gi|327440155|dbj|BAK16520.1| periplasmic protease [Solibacillus silvestris StLB046]
          Length = 500

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P +      +  S++     L + G       +   FD   E+A+K +Q  + L+ +G++
Sbjct: 403 PSQQYEKEANHASIKTAERILEVLGYEPG--KVDTQFDGATEAALKAYQQDNDLEVTGIL 460

Query: 158 DSSTLEAM 165
              T  A+
Sbjct: 461 TGDTTYAL 468


>gi|224092310|ref|XP_002309553.1| predicted protein [Populus trichocarpa]
 gi|222855529|gb|EEE93076.1| predicted protein [Populus trichocarpa]
          Length = 298

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP-----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             G+    V +L++     G L        +     FD  +E A+K +Q+   L P+G++
Sbjct: 46  KKGDKVEGVDQLKKFFHHFGYLTHGGLNNDEVDDDYFDETIERALKTYQINFNLKPTGVL 105

Query: 158 DSSTLEAM 165
           D+ T+  M
Sbjct: 106 DAETVSLM 113


>gi|1351737|sp|P49320|YBP1_STRAU RecName: Full=Uncharacterized protein in bpoA1 3'region; AltName:
           Full=ORF1
 gi|522151|gb|AAC43254.1| hypothetical 118 amino acid truncated protein encoded by ORF1
           [Streptomyces aureofaciens]
          Length = 118

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 9/68 (13%)

Query: 102 LHLGNSSVSVQRLR----ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           L   +S  +V+ L+      L   G       +   F     +AV+ FQ   GL P G+V
Sbjct: 43  LSQDDSGDAVKALQCELYNSLAYMG-----PDVDGYFGPKTLAAVQKFQTCTGLKPDGIV 97

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 98  GPLTWAKL 105


>gi|332982349|ref|YP_004463790.1| ErfK/YbiS/YcfS/YnhG family protein [Mahella australiensis 50-1 BON]
 gi|332700027|gb|AEE96968.1| ErfK/YbiS/YcfS/YnhG family protein [Mahella australiensis 50-1 BON]
          Length = 266

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R L+ G+ + +V  +++RL   G  + S  L   +   +++A+  F+  +GL  +  VD
Sbjct: 196 LRLLNPGDRNSAVMEVQKRLKKLGYYNGS--LDGIYGEGMKAALLKFKKDYGLPYTHTVD 253

Query: 159 SSTLEAMNV 167
           + T + +N+
Sbjct: 254 AVTYKTLNI 262


>gi|227498873|ref|ZP_03929013.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904325|gb|EEH90243.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 219

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G+      PL +G+    V+ ++ +L   G   P   L+  +   +E  V++FQ  H L 
Sbjct: 9   GFAAKKNAPLKVGDKGWKVKTVQTKLNTLGLKTP---LTGKYSRDLEKQVRIFQKTHKLP 65

Query: 153 PSGMVDSSTLEAMN 166
            +G VD  T   +N
Sbjct: 66  VTGKVDDKTYFRIN 79


>gi|17231422|ref|NP_487970.1| hypothetical protein alr3930 [Nostoc sp. PCC 7120]
 gi|17133064|dbj|BAB75629.1| alr3930 [Nostoc sp. PCC 7120]
          Length = 228

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 98  PIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           PI P L   NS VSV+ L+  L+ +G   P  G    F    E AVK FQ +  L   G+
Sbjct: 158 PISPNLSFSNSGVSVRVLQRLLVANGYPIPVDG---VFGPVTEIAVKAFQEQQNLTVDGI 214

Query: 157 VDSSTLEAMNV 167
           V   T   +  
Sbjct: 215 VGVQTWYCLTT 225


>gi|302876620|ref|YP_003845253.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Clostridium cellulovorans 743B]
 gi|307687294|ref|ZP_07629740.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Clostridium cellulovorans 743B]
 gi|302579477|gb|ADL53489.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Clostridium cellulovorans 743B]
          Length = 339

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 8/78 (10%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP      L  G+S V+V  L+    +  +      +   F     +AVK FQ   GL  
Sbjct: 35  WPT-----LQHGSSGVNVYALQ---YLLNNQSAGITVDGTFGPGTTTAVKNFQTSKGLTS 86

Query: 154 SGMVDSSTLEAMNVPVDL 171
            G+V  +T   + V    
Sbjct: 87  DGIVGQNTWSKLCVTTQQ 104


>gi|296330698|ref|ZP_06873175.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305673955|ref|YP_003865627.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSZ protein
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152162|gb|EFG93034.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305412199|gb|ADM37318.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSZ protein
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 317

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 96  ELPIRPLHLGN---SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMR 148
            LP   + + +      +V++++  L            + G+   +     +AVK FQ  
Sbjct: 237 PLPSGVIKVTSPLTKGTNVKQVQTALAALYFYPDKGAKNHGVDGVYGPKTANAVKRFQSV 296

Query: 149 HGLDPSGMVDSSTLE 163
            GL   G+    T  
Sbjct: 297 SGLTADGIYGPKTKA 311


>gi|284050198|ref|ZP_06380408.1| ErfK/YbiS/YcfS/YnhG [Arthrospira platensis str. Paraca]
          Length = 163

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 52/172 (30%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
            L+       +++ +    +    N ++     + +GR   +TPI H ++ +++ +P W 
Sbjct: 29  WLQYSPSQLELVIRLGERRVYVYNNTQLVTSYPIAIGRNGWETPIGHYQVIQMIEDPIWE 88

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P   +  D++                                             PG  
Sbjct: 89  HP---LNGDIIP--------------------------------------------PGGD 101

Query: 306 NAMAS--TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           N + S          N    H TP            + GCVR+ N   L ++
Sbjct: 102 NPLGSHWIGFWTDGTNYIGFHGTPNEETVGQ---AVSHGCVRMFNRDVLALF 150


>gi|317130271|ref|YP_004096553.1| carboxyl-terminal protease [Bacillus cellulosilyticus DSM 2522]
 gi|315475219|gb|ADU31822.1| carboxyl-terminal protease [Bacillus cellulosilyticus DSM 2522]
          Length = 489

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 10/88 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L L  ++  +   +  L   G  DP +     F   +E AV+ FQ   G++ +G++DS T
Sbjct: 402 LQLDMNNSHIATAQVILKGLGY-DPQRSDG-YFSKEMEEAVRQFQADMGIEVTGVIDSET 459

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
                     +++Q  +N ++ ++   Q
Sbjct: 460 --------ADQLQQEVINAIQSREHDNQ 479


>gi|119493547|ref|ZP_01624212.1| hypothetical protein L8106_25887 [Lyngbya sp. PCC 8106]
 gi|119452601|gb|EAW33783.1| hypothetical protein L8106_25887 [Lyngbya sp. PCC 8106]
          Length = 194

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 48/113 (42%), Gaps = 13/113 (11%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQR 113
           + +  ++    S +   +       +        ILS G    + +  L LG +  +V+ 
Sbjct: 2   SAMTNIETNGQSTVSTATIPAYTSVQSG-----AILSHG----VELPVLSLGVAGEAVRF 52

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSSTLEAM 165
            ++RL+ +G      G +  +   +++A++ FQ  +G L   G++  +T   +
Sbjct: 53  AQQRLMANGY---RIGFNGQYGPQMKAAIEHFQAYYGGLVVDGILGENTWRGL 102



 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           + +  L+ G+   +V+ L+ RL   G    S  +   F      AV++FQ R  L   G+
Sbjct: 127 VNMSELNQGHVGDAVECLQLRLYAQGF---SLFIDGDFGLRTREAVEVFQRRESLKIDGI 183

Query: 157 VDSSTLEAM 165
           V   T   +
Sbjct: 184 VGVQTWRKL 192


>gi|311279980|ref|YP_003942211.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
 gi|308749175|gb|ADO48927.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
          Length = 321

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L     G+       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYPPGQNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K N I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKANGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|301511179|ref|ZP_07236416.1| hypothetical protein AbauAB05_06353 [Acinetobacter baumannii AB058]
          Length = 415

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 64/253 (25%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 167 KAIASFQQMNGLSPTGELTKETWDAL-VAKQNKPAFIEYTI------TDADLKGPYAQ-S 218

Query: 200 IP-AASLEAVENGKVGLRSTV--IVG----------RVDRQTPILHSRINRIMFNPYWVI 246
           IP   +L+A   G     + V  ++G          +    T        +I+      +
Sbjct: 219 IPSDYALQAKMKG--LYYTRVSEMLGEKFHIDETFLKKINPTATFKKVGEKII------V 270

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEV------------------ 286
           P   ++ D+   +     +     +++ + + + +  F   +                  
Sbjct: 271 PN--VRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVA 328

Query: 287 --DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
              W S  P NF            PG    + +  I   S+ +  +H TP P L +    
Sbjct: 329 RNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTA- 386

Query: 338 FETSGCVRVRNII 350
             + GC+R+ N  
Sbjct: 387 --SHGCIRLTNWD 397


>gi|284047500|ref|YP_003397839.1| NLP/P60 protein [Acidaminococcus fermentans DSM 20731]
 gi|283951721|gb|ADB46524.1| NLP/P60 protein [Acidaminococcus fermentans DSM 20731]
          Length = 232

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL +G+    V+ ++ +L   G   P  G    +   +E  V+ FQ  H L  +G VD +
Sbjct: 30  PLKVGDKGWKVKTVQIKLNAIGMKTPQTGK---YTRELEGQVRNFQKEHRLPATGKVDDT 86

Query: 161 T 161
           T
Sbjct: 87  T 87


>gi|224476551|ref|YP_002634157.1| putative protease [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222421158|emb|CAL27972.1| putative protease [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 489

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+++ +V+ ++  L   G    +   +  FD  ++SA++ FQ  + L+ +G  D  T
Sbjct: 405 LKEGDNNKNVKSIKIGLKALGY--DTGEENNDFDGTLKSAIESFQKDNQLEVNGTFDKET 462


>gi|152975663|ref|YP_001375180.1| spore cortex-lytic enzyme SleB [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152024415|gb|ABS22185.1| Spore cortex-lytic enzyme SleB [Bacillus cytotoxicus NVH 391-98]
          Length = 247

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+    T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGYYTG--KVDGVFGWGTYWALRNFQQKFGLKVDGLAGPKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|184158889|ref|YP_001847228.1| hypothetical protein ACICU_02569 [Acinetobacter baumannii ACICU]
 gi|213158089|ref|YP_002320140.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii AB0057]
 gi|215482781|ref|YP_002324982.1| hypothetical protein ABBFA_001071 [Acinetobacter baumannii
           AB307-0294]
 gi|239502499|ref|ZP_04661809.1| hypothetical protein AbauAB_09314 [Acinetobacter baumannii AB900]
 gi|301347442|ref|ZP_07228183.1| hypothetical protein AbauAB0_14373 [Acinetobacter baumannii AB056]
 gi|301596121|ref|ZP_07241129.1| hypothetical protein AbauAB059_09914 [Acinetobacter baumannii
           AB059]
 gi|332854140|ref|ZP_08435198.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150]
 gi|332867906|ref|ZP_08437908.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113]
 gi|332875748|ref|ZP_08443548.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059]
 gi|183210483|gb|ACC57881.1| uncharacterized protein conserved in bacteria [Acinetobacter
           baumannii ACICU]
 gi|193077900|gb|ABO12790.2| hypothetical protein A1S_2371 [Acinetobacter baumannii ATCC 17978]
 gi|213057249|gb|ACJ42151.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii AB0057]
 gi|213988538|gb|ACJ58837.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
 gi|322508867|gb|ADX04321.1| putative exported protein [Acinetobacter baumannii 1656-2]
 gi|332728196|gb|EGJ59582.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150]
 gi|332733679|gb|EGJ64837.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113]
 gi|332736072|gb|EGJ67099.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059]
          Length = 415

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 64/253 (25%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 167 KAIASFQQMNGLSPTGELTKETWDAL-VAKQNKPAFIEYTI------TDADLKGPYAQ-S 218

Query: 200 IP-AASLEAVENGKVGLRSTV--IVG----------RVDRQTPILHSRINRIMFNPYWVI 246
           IP   +L+A   G     + V  ++G          +    T        +I+      +
Sbjct: 219 IPSDYALQAKMKG--LYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKII------V 270

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEV------------------ 286
           P   ++ D+   +     +     +++ + + + +  F   +                  
Sbjct: 271 PN--VRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVA 328

Query: 287 --DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
              W S  P NF            PG    + +  I   S+ +  +H TP P L +    
Sbjct: 329 RNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTA- 386

Query: 338 FETSGCVRVRNII 350
             + GC+R+ N  
Sbjct: 387 --SHGCIRLTNWD 397


>gi|297204540|ref|ZP_06921937.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197710599|gb|EDY54633.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 300

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S   V    + L+    + P  G+   F      AVK FQ R GLD  G++   + +
Sbjct: 239 YGASGADVAE-AQCLLRRAGISPG-GIDGMFGPLTLRAVKTFQDREGLDADGILGPRSWK 296

Query: 164 AM 165
           A+
Sbjct: 297 AL 298


>gi|324113536|gb|EGC07511.1| ykud domain-containing protein [Escherichia fergusonii B253]
          Length = 324

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINLAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|291569009|dbj|BAI91281.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 153

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 52/172 (30%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
            L+       +++ +    +    N ++     + +GR   +TPI H ++ +++ +P W 
Sbjct: 19  WLQYSPSQLELVIRLGERRVYVYNNTQLVTSYPIAIGRNGWETPIGHYQVIQMIEDPIWE 78

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P   +  D++                                             PG  
Sbjct: 79  HP---LNGDIIP--------------------------------------------PGGD 91

Query: 306 NAMAS--TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           N + S          N    H TP            + GCVR+ N   L ++
Sbjct: 92  NPLGSHWIGFWTDGTNYIGFHGTPNEETVGQ---AVSHGCVRMFNRDVLALF 140


>gi|50401100|sp|Q90YC2|MMP21_CYNPY RecName: Full=Matrix metalloproteinase-21; Short=MMP-21; Flags:
           Precursor
 gi|14787103|dbj|BAB62075.1| matrix metalloproteinase-21 [Cynops pyrrhogaster]
          Length = 616

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 43/118 (36%), Gaps = 17/118 (14%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-LGNSSVSVQRLRER- 117
           D       P    E +   + A    Q  LS+ GW E    P+   G SS +   L    
Sbjct: 30  DHSDLQPSPQHQAELVTDLQSA----QQFLSKYGWTE----PVKWEGTSSKNAAELPRYG 81

Query: 118 ---LIISGD----LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
              L+  G           L          A++ FQ  +GL  +G +D ST+ AMN P
Sbjct: 82  DADLMQEGASISRYGQEFPLEPTQAPAFVEALRKFQTLNGLPATGKLDDSTIAAMNKP 139


>gi|330828414|ref|YP_004391366.1| peptidoglycan-binding LysM [Aeromonas veronii B565]
 gi|328803550|gb|AEB48749.1| Peptidoglycan-binding LysM [Aeromonas veronii B565]
          Length = 308

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 58/205 (28%), Gaps = 49/205 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++N+    L     GK  +    + +G++   TP    + + R    P W  
Sbjct: 95  PDAPREGIVLNVAEMRLYYYPKGKKVVEVLPIGIGQLGTDTPENWVTSVQRKKAGPTWT- 153

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                        +   +Y                             +       G  N
Sbjct: 154 ----------PTAKMHAEYAAR------------------------GESLPAVWPAGPDN 179

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            M    +          H T     F   +R  + GCVR+RN  D+  +L K  P  +R 
Sbjct: 180 PMGLFALYIGKMYAI--HGTNAN--FGIGLR-VSHGCVRLRN-DDIA-YLFKQVPVGTRV 232

Query: 367 H-----IEEVVKTRKTTPVKLATEV 386
                 I+  ++      +++   +
Sbjct: 233 QFVNQPIKASLEPNGVRYLEVHQPL 257


>gi|302532773|ref|ZP_07285115.1| predicted protein [Streptomyces sp. C]
 gi|302441668|gb|EFL13484.1| predicted protein [Streptomyces sp. C]
          Length = 141

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 25/106 (23%)

Query: 89  LSRGG-WPELPIRP-------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           +SRGG W  +P          +  G+S  +V  L+  L I   +D     S  + A  E+
Sbjct: 43  VSRGGYWTAVPATSGGSTSCVMGRGSSGPAVGELQLALAICYGMDTGGSDS-IYGAKTEA 101

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           AV+  Q   G    G+   +T                 N++  +  
Sbjct: 102 AVRSLQSATGQTADGIYGPNTR----------------NVVEWRWY 131


>gi|262372118|ref|ZP_06065397.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
 gi|262312143|gb|EEY93228.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
          Length = 402

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 84/248 (33%), Gaps = 54/248 (21%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       E  +   Y   +
Sbjct: 154 KAIASFQQMNGLTPTGELTKETWDAL-VAKQTKPAYVEYTI------TEADLKGPYAE-S 205

Query: 200 IP-AASLEAVENGKVGLRSTVIVG----------RVDRQTPILHSRINRIMFNPYWVI-- 246
           IP   +L+A   G    R T ++G          +    T        +I+      +  
Sbjct: 206 IPSDYALQAKMKGLYYTRVTEMLGEKFHMDENFLKKINPTATFKKAGEKIIVA---NVRN 262

Query: 247 --PRSIIQKDMMALLRQDPQYLKDNNIHMI---------------DEKGKEVFVEEVDWN 289
             P  I    ++A       YL ++   MI                   K V V +  W 
Sbjct: 263 DLPEDIHL--IVAHKGARQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVAKNPWY 320

Query: 290 SPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
           S  P NF            PG    + +  I   S+ +  +H TP P L +      + G
Sbjct: 321 SYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPSPSLISKTA---SHG 376

Query: 343 CVRVRNII 350
           C+R+ N  
Sbjct: 377 CIRLTNWD 384


>gi|218548643|ref|YP_002382434.1| hypothetical protein EFER_1277 [Escherichia fergusonii ATCC 35469]
 gi|218356184|emb|CAQ88801.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
          Length = 326

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L     GK       + +G++  D  TP + + ++   
Sbjct: 93  LQTLLP-DAPREGIVINLAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 151

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 152 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 176

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 177 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 223


>gi|227113507|ref|ZP_03827163.1| hypothetical protein PcarbP_11112 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 357

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 57/205 (27%), Gaps = 49/205 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++N     L     G K  +   + +G + + TPI   + + R    P W  
Sbjct: 92  PDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTSVQRKKAGPTWT- 150

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                        +   +Y                                     G  N
Sbjct: 151 ----------PTAKMHAEYAAR------------------------GETLQKVFPAGPDN 176

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            M    +   +      H T     F   +R  + GCVR+R+  D   +L  + P  +R 
Sbjct: 177 PMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLRD--DDIKYLFNNVPVGTRV 229

Query: 367 HI-----EEVVKTRKTTPVKLATEV 386
                  +  V+   +  V++   +
Sbjct: 230 QFINEPVKATVEPDGSRYVEVHNPL 254


>gi|71278853|ref|YP_269370.1| CHAP domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71144593|gb|AAZ25066.1| CHAP domain protein [Colwellia psychrerythraea 34H]
          Length = 265

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDA-YVESAVKLFQMRH----G--LDPSGMVDSS 160
              V +L++ L  +G  +  K     FD    ++AV LFQ++H    G  L P G++ + 
Sbjct: 11  DPEVIKLQQLLSSNGYFEEIKPSHGLFDGITFDNAV-LFQLQHIYKDGDPLKPDGVIGAK 69

Query: 161 TLEAMNVPVDLRIR 174
           T  A+  P   + R
Sbjct: 70  TWWALKNPSGEKQR 83


>gi|28373183|ref|NP_783826.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium tetani
           E88]
 gi|28208767|gb|AAO37449.1|AF528097_55 putative N-acetylmuramoyl-L-alanine amidase [Clostridium tetani
           E88]
          Length = 227

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 26/59 (44%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              +V+ ++E+L+  G    S G          +A+K FQ  +G+   G+V   T   +
Sbjct: 167 KDNNVRIIQEKLMEKGYNVGSYGADGYLGGTTLNAIKSFQRDNGILVDGIVGRDTWGRL 225


>gi|172037339|ref|YP_001803840.1| hypothetical protein cce_2426 [Cyanothece sp. ATCC 51142]
 gi|171698793|gb|ACB51774.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 198

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 52/166 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            ++++N+    + A ++ +V     V +G+   +TP     + +++ +P W         
Sbjct: 73  THLVLNLKERRVYAYQDDQVIANYPVAIGKPGWETPRGDFSVIQMVEDPQW--------- 123

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                  ++P                 V                     G  + +    I
Sbjct: 124 -------KNP-------------WNGRVS------------------AAGPNSPLGERWI 145

Query: 314 EFYSRNNTY--MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            F+     Y   H TP   +        + GCVR+RN     ++ L
Sbjct: 146 GFWREGGKYIGFHGTPGEHVMGQ---AVSHGCVRMRNRDVKALYEL 188


>gi|330826784|ref|YP_004390087.1| peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans K601]
 gi|329312156|gb|AEB86571.1| Peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans K601]
          Length = 342

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           PE   + L     S  V+ L+ RL  +  L     +   +       V+ FQ  HGL  +
Sbjct: 44  PEPLAQELRHRMESPLVRELQVRLRHAKYLALYD-VDDRYGLKTRETVRKFQKDHGLRET 102

Query: 155 GMVDSSTLEAM 165
           G+VD +T + +
Sbjct: 103 GVVDQATWDRL 113


>gi|307273110|ref|ZP_07554356.1| peptidase [Enterococcus faecalis TX0855]
 gi|306510095|gb|EFM79119.1| peptidase [Enterococcus faecalis TX0855]
          Length = 477

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 389 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLLVTGEIDN 446

Query: 160 ST 161
            T
Sbjct: 447 ET 448


>gi|288554111|ref|YP_003426046.1| carboxy-terminal processing protease [Bacillus pseudofirmus OF4]
 gi|288545271|gb|ADC49154.1| carboxy-terminal processing protease [Bacillus pseudofirmus OF4]
          Length = 487

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 8/87 (9%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L L   +  ++  +  L   G           +D   E AV+ FQ   GL  +G +D  
Sbjct: 396 TLTLDMMNEQIRSAQTMLKGLG--HEPGRTDGYYDEQTEQAVRAFQKAQGLSETGDIDEE 453

Query: 161 TLEAMN------VPVDLRIRQLQVNLM 181
           T  A+       V  +   +QLQ  + 
Sbjct: 454 TAGALQQIIVDEVRDESNDKQLQTAIE 480


>gi|256965014|ref|ZP_05569185.1| carboxyl-terminal protease [Enterococcus faecalis HIP11704]
 gi|256955510|gb|EEU72142.1| carboxyl-terminal protease [Enterococcus faecalis HIP11704]
          Length = 480

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+
Sbjct: 392 KTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLLVTGEIDN 449

Query: 160 ST 161
            T
Sbjct: 450 ET 451


>gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 415

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 64/253 (25%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 167 KAIASFQQMNGLSPTGELTKETWDAL-VAKQNKPAFIEYTI------TDADLKGPYAQ-S 218

Query: 200 IP-AASLEAVENGKVGLRSTV--IVG----------RVDRQTPILHSRINRIMFNPYWVI 246
           IP   +L+A   G     + V  ++G          +    T        +I+      +
Sbjct: 219 IPSDYALQAKMKG--LYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKII------V 270

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEV------------------ 286
           P   ++ D+   +     +     +++ + + + +  F   +                  
Sbjct: 271 PN--VRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVA 328

Query: 287 --DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
              W S  P NF            PG    + +  I   S+ +  +H TP P L +    
Sbjct: 329 RNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTA- 386

Query: 338 FETSGCVRVRNII 350
             + GC+R+ N  
Sbjct: 387 --SHGCIRLTNWD 397


>gi|258514282|ref|YP_003190504.1| glycoside hydrolase family 18 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777987|gb|ACV61881.1| glycoside hydrolase family 18 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 426

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L LG+    V  L+ +L ++G     + +S  F      AV  F+  + L   G
Sbjct: 31  SVTPGNLRLGDRGPDVTLLQTKLKVAGFY-QGEKVSGYFGLNTLFAVSKFEKANRLRVDG 89

Query: 156 MVDSS---TLEAMNVPVDLRIRQLQV 178
           +VD+     L+ +      +++++ +
Sbjct: 90  IVDAEEWIALQKLTAIPADKLKKMVL 115


>gi|84495100|ref|ZP_00994219.1| hypothetical protein JNB_09879 [Janibacter sp. HTCC2649]
 gi|84384593|gb|EAQ00473.1| hypothetical protein JNB_09879 [Janibacter sp. HTCC2649]
          Length = 282

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P +    G  S +V  ++  L   G    + G   +F    ++AV  FQ   GL   G+V
Sbjct: 7   PWKTASQGAVSQAVSGIQYLLKAHGHAVATDG---SFGPGTKAAVIAFQKAKGLPADGVV 63

Query: 158 DSSTLEAM 165
            + T + +
Sbjct: 64  GTVTWQKL 71



 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 7/73 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            WP L I  + LG+   +V+ ++        +     +  +F    ++AV+ +Q      
Sbjct: 211 DWPAL-IVTVKLGDKGEAVKAVQT------LVPGGLTVDGSFGPSTDAAVRNYQTMFSPP 263

Query: 153 PSGMVDSSTLEAM 165
             G+V  +T   +
Sbjct: 264 SDGIVGPNTWHTL 276


>gi|194334671|ref|YP_002016531.1| peptidoglycan-binding domain 1 protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194312489|gb|ACF46884.1| Peptidoglycan-binding domain 1 protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 268

 Score = 46.4 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 102 LHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L  G+     V  L+  L  +G L    G    F    + AVK  Q + GL   G+V   
Sbjct: 4   LKKGSRKERAVILLQIMLAEAGLLSSVDGK---FGQATDEAVKALQRQSGLVVDGIVGEK 60

Query: 161 TLEAM 165
           T   +
Sbjct: 61  TWTTL 65


>gi|297545506|ref|YP_003677808.1| spore cortex-lytic enzyme [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843281|gb|ADH61797.1| spore cortex-lytic enzyme [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 236

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+   V +++ RL   G    +  +   F      AV+ FQ  +GL+ +G+VD  T  A
Sbjct: 42  GNTGSDVAKVQARLKDWGYYQGA--VDGFFGVRTWLAVRKFQAYNGLNVTGIVDDDTKVA 99

Query: 165 M 165
           +
Sbjct: 100 L 100


>gi|150014928|ref|YP_001307182.1| peptidoglycan binding domain-containing protein [Clostridium
            beijerinckii NCIMB 8052]
 gi|149901393|gb|ABR32226.1| Peptidoglycan-binding domain 1 protein [Clostridium beijerinckii
            NCIMB 8052]
          Length = 1061

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 98   PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            P  PL +G+S  +V+ ++ +L        L P       F+     AVK FQ    L  +
Sbjct: 944  PGEPLTIGSSGPAVRTIQNQLNRIARNYPLIPKVAEDGQFNQKTADAVKTFQQIFTLPQT 1003

Query: 155  GMVDSSTLE 163
            G+VD +T  
Sbjct: 1004 GIVDYATWY 1012


>gi|158311949|ref|YP_001504457.1| peptidoglycan binding domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158107354|gb|ABW09551.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EAN1pec]
          Length = 408

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P R L  G     V+ L   L   G       +   FDA   SAV+ +Q + GL   G V
Sbjct: 167 PYRTLATGTVGSDVKELEASLQELGY--TGFAVDDTFDAATASAVQAWQAKSGLPAQGTV 224

Query: 158 DSS 160
              
Sbjct: 225 SPD 227


>gi|295696531|ref|YP_003589769.1| spore cortex-lytic enzyme [Bacillus tusciae DSM 2912]
 gi|295412133|gb|ADG06625.1| spore cortex-lytic enzyme [Bacillus tusciae DSM 2912]
          Length = 239

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+  V V  L+ RL        +  +   F      AV+ FQ   GL   G+   +T  A
Sbjct: 39  GSRGVDVTELQGRLRYVNYYHGA--IDGVFGWQTYWAVRNFQRDVGLRVDGIAGPATKAA 96

Query: 165 M 165
           +
Sbjct: 97  L 97


>gi|4455296|emb|CAB36831.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268071|emb|CAB78409.1| hypothetical protein [Arabidopsis thaliana]
          Length = 432

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDP 153
            ++  R L +G+    VQ L+E L+  G     + +   +F +   SAVK +Q   G+  
Sbjct: 171 KKIKRRILKVGSEGDDVQALQEALLKLGFYSGEEDMEFSSFSSGTASAVKTWQASLGVRE 230

Query: 154 SGMVDSSTLEAM 165
            G++ +  L+ +
Sbjct: 231 DGVMTAELLQRL 242


>gi|157821123|ref|NP_001099778.1| matrix metalloproteinase-21 [Rattus norvegicus]
 gi|149061331|gb|EDM11754.1| matrix metalloproteinase 21 (predicted) [Rattus norvegicus]
          Length = 568

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 45/135 (33%), Gaps = 34/135 (25%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              +    + +      D       P+   + IA    A    Q+ L + GW E+     
Sbjct: 15  WLVTPQPAQPERLFHSRDRSDLEPSPLSRAKPIADLHAA----QNFLLKYGWSEVSSPK- 69

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                                   S G+ V F   +  AV+ FQ  + L  SG +DS TL
Sbjct: 70  -----------------------ESAGVPVGF--TLAQAVRRFQKANRLPASGKLDSPTL 104

Query: 163 EAMNVP----VDLRI 173
            AMN P     D R+
Sbjct: 105 AAMNKPRCGVPDTRL 119


>gi|30682566|ref|NP_193103.2| PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5); heat shock protein
           binding / unfolded protein binding [Arabidopsis
           thaliana]
 gi|119360137|gb|ABL66797.1| At4g13670 [Arabidopsis thaliana]
 gi|332657911|gb|AEE83311.1| protein plastid transcriptionally active 5 [Arabidopsis thaliana]
          Length = 387

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDP 153
            ++  R L +G+    VQ L+E L+  G     + +   +F +   SAVK +Q   G+  
Sbjct: 171 KKIKRRILKVGSEGDDVQALQEALLKLGFYSGEEDMEFSSFSSGTASAVKTWQASLGVRE 230

Query: 154 SGMVDSSTLEAM 165
            G++ +  L+ +
Sbjct: 231 DGVMTAELLQRL 242


>gi|260556712|ref|ZP_05828930.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii ATCC 19606]
 gi|260409971|gb|EEX03271.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii ATCC 19606]
          Length = 418

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 64/253 (25%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 170 KAIASFQQMNGLSPTGELTKETWDAL-VAKQNKPAFIEYTI------TDADLKGPYAQ-S 221

Query: 200 IP-AASLEAVENGKVGLRSTV--IVG----------RVDRQTPILHSRINRIMFNPYWVI 246
           IP   +L+A   G     + V  ++G          +    T        +I+      +
Sbjct: 222 IPSDYALQAKMKG--LYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKII------V 273

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEV------------------ 286
           P   ++ D+   +     +     +++ + + + +  F   +                  
Sbjct: 274 PN--VRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVA 331

Query: 287 --DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
              W S  P NF            PG    + +  I   S+ +  +H TP P L +    
Sbjct: 332 RNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTA- 389

Query: 338 FETSGCVRVRNII 350
             + GC+R+ N  
Sbjct: 390 --SHGCIRLTNWD 400


>gi|169795243|ref|YP_001713036.1| hypothetical protein ABAYE1105 [Acinetobacter baumannii AYE]
 gi|169148170|emb|CAM86033.1| conserved hypothetical protein; putative exported protein
           [Acinetobacter baumannii AYE]
          Length = 418

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 64/253 (25%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 170 KAIASFQQMNGLSPTGELTKETWDAL-VAKQNKPAFIEYTI------TDADLKGPYAQ-S 221

Query: 200 IP-AASLEAVENGKVGLRSTV--IVG----------RVDRQTPILHSRINRIMFNPYWVI 246
           IP   +L+A   G     + V  ++G          +    T        +I+      +
Sbjct: 222 IPSDYALQAKMKG--LYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKII------V 273

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEV------------------ 286
           P   ++ D+   +     +     +++ + + + +  F   +                  
Sbjct: 274 PN--VRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVA 331

Query: 287 --DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
              W S  P NF            PG    + +  I   S+ +  +H TP P L +    
Sbjct: 332 RNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTA- 389

Query: 338 FETSGCVRVRNII 350
             + GC+R+ N  
Sbjct: 390 --SHGCIRLTNWD 400


>gi|325497054|gb|EGC94913.1| hypothetical protein ECD227_1151 [Escherichia fergusonii ECD227]
          Length = 324

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINLAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 150 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|147812598|emb|CAN66084.1| hypothetical protein VITISV_024635 [Vitis vinifera]
          Length = 353

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKG-LSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G+    +  L++     G L    G ++  FD  +ESAV  +Q + GL  +G  DS T
Sbjct: 55  RRGSRISGMAELKKYFNRFGYLGFQDGNVTDVFDTRLESAVAAYQAKLGLQVTGRFDSET 114

Query: 162 LEAM 165
           L  M
Sbjct: 115 LSQM 118


>gi|291085508|ref|ZP_06571091.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Citrobacter
           youngae ATCC 29220]
 gi|291071175|gb|EFE09284.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Citrobacter
           youngae ATCC 29220]
          Length = 323

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + G        + +G++  D  TP + + ++   
Sbjct: 94  LQTLLP-DAPREGIVINLAELRLYYYQPGTNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 152

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K N I +                          
Sbjct: 153 ANPTWTPTANIRAR------------YKANGIDL-----------------------PAV 177

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 178 VPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 224


>gi|254409634|ref|ZP_05023415.1| ErfK/YbiS/YcfS/YnhG family [Microcoleus chthonoplastes PCC 7420]
 gi|196183631|gb|EDX78614.1| ErfK/YbiS/YcfS/YnhG family [Microcoleus chthonoplastes PCC 7420]
          Length = 237

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 51/163 (31%), Gaps = 52/163 (31%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            ++V++  A + +    +      V VG+   +TP  + ++ R   NP W  P   I  D
Sbjct: 112 RLVVDLSDAKVYSYWGEQEIASYPVAVGQPGWETPTGNFKVLRKQRNPIWRQP---ITGD 168

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
           ++                                              G  N +    I 
Sbjct: 169 LIPT--------------------------------------------GPDNPLGDRWIG 184

Query: 315 FYSR--NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           F+S   +    H T +  L    V   + GC+R+RN     ++
Sbjct: 185 FWSDEYHQIGFHGTNDEDLVGQPV---SHGCLRMRNADIQALY 224


>gi|312792945|ref|YP_004025868.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180085|gb|ADQ40255.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 223

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++   V  ++ RL   G    S  +   + A +E A+ LFQ ++ L  +  +  
Sbjct: 154 RTIYPGDTGEDVMAVQRRLKELGFYSGS--IDGKYGAALEYAINLFQKKNKLSVTNKITP 211

Query: 160 STLEAM 165
             L  M
Sbjct: 212 YLLRKM 217


>gi|307265107|ref|ZP_07546667.1| spore cortex-lytic enzyme [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326390828|ref|ZP_08212380.1| spore cortex-lytic enzyme [Thermoanaerobacter ethanolicus JW 200]
 gi|306919905|gb|EFN50119.1| spore cortex-lytic enzyme [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325993087|gb|EGD51527.1| spore cortex-lytic enzyme [Thermoanaerobacter ethanolicus JW 200]
          Length = 236

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           +     +  +  L+ GN+   V +++ RL   G    +  +   F      AV+ FQ  +
Sbjct: 27  AAYDLTKTAMSNLYWGNTGSDVAKVQARLKDWGYYTGA--VDGFFGVRTWLAVRKFQAYN 84

Query: 150 GLDPSGMVDSSTLEAM 165
           GL  +G+VD  T  A+
Sbjct: 85  GLRVTGIVDDDTKVAL 100


>gi|298346070|ref|YP_003718757.1| hypothetical protein HMPREF0573_10944 [Mobiluncus curtisii ATCC
           43063]
 gi|298236131|gb|ADI67263.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
          Length = 559

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +   V+ +R RL +   L+     S+ FD    +AV  FQ R GL  SG+VD +T   
Sbjct: 346 GWNGTKVREVRARLGVGVPLNA----SMTFDRATRNAVVRFQRRSGLPASGVVDYATWVR 401

Query: 165 MNVPV 169
           +    
Sbjct: 402 LTGRP 406


>gi|225849285|ref|YP_002729449.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643963|gb|ACN99013.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 460

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 47/184 (25%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRV 224
           P D+R  Q+ +   R + L  +      + +NI    L     +E+    +   + +G  
Sbjct: 249 PFDIRKNQIIIVPFR-RILPIKNFSYGTIYININEKRLYYPVLIEDKSYIITFPIGIGAD 307

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           + Q+P+   +I +   NP W  P SI +K+                              
Sbjct: 308 EAQSPVGDFKITQKRKNPAWYPPESI-RKE------------------------------ 336

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                    P+      PG  N + +  +   +  +  MH T +       V   + GC+
Sbjct: 337 --------QPDLPPVFPPGPDNPLGTRAMRLGNT-SFLMHGTNKEYGIGMKV---SHGCI 384

Query: 345 RVRN 348
           R+ N
Sbjct: 385 RMYN 388


>gi|56963123|ref|YP_174850.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
 gi|56909362|dbj|BAD63889.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
          Length = 301

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R +  G      + L+  L ++G           F    E AV+ FQ   GL   G+  
Sbjct: 236 ARNVRKGAKGNLTRVLQALLYMAG--HNPGPFDGVFGNGTEKAVRAFQRDKGLGVDGIAG 293

Query: 159 SSTLEAM 165
            +T  A+
Sbjct: 294 KNTWRAL 300


>gi|256390233|ref|YP_003111797.1| peptidoglycan-binding protein [Catenulispora acidiphila DSM 44928]
 gi|256356459|gb|ACU69956.1| Peptidoglycan-binding domain 1 protein [Catenulispora acidiphila
           DSM 44928]
          Length = 410

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RPL +G +   V+     L   G    + G S  + A   +AVK +Q   GLD +G VD 
Sbjct: 151 RPLTVGTTGADVKEFETDLAALGYTGFTPGTS--YTADTAAAVKKWQAAVGLDQTGNVDP 208

Query: 160 STLEAMNVPVDLRIRQLQVNL 180
           +  +A      +RI  L  +L
Sbjct: 209 A--QAAVTSGPIRIAALHTSL 227


>gi|325981388|ref|YP_004293790.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
 gi|325530907|gb|ADZ25628.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
          Length = 331

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 57/182 (31%)

Query: 185 KLLEQK-----MGLRYVL---------VNIPAASLEAV---ENGK--VGLRSTVIVGRVD 225
           + L +      +  RY++         +N+P   +      + G+        V +GR+D
Sbjct: 75  RWLPEDGVTVTLPSRYIIPQAERKGLVLNLPEMRIYYFPEPKKGEKPTVTTHPVGIGRMD 134

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
             TP+  SRI     +P W+ P+S+                                  +
Sbjct: 135 WVTPLGISRIIEKKKDPTWIPPKSL----------------------------------Q 160

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCV 344
           +D  +   P +     PG  N +    +     + +Y +H T +P  F   +R  ++GCV
Sbjct: 161 MDRIANGEPPYPSIVPPGPTNPLGRHAMRLSIGSGSYLIHGTIKP--FGVGMR-VSAGCV 217

Query: 345 RV 346
           R+
Sbjct: 218 RM 219


>gi|255658560|ref|ZP_05403969.1| endopeptidase, cell wall lytic activity [Mitsuokella multacida DSM
           20544]
 gi|260849364|gb|EEX69371.1| endopeptidase, cell wall lytic activity [Mitsuokella multacida DSM
           20544]
          Length = 254

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L L +S   V  L+++L   G     K +   F    +  V  FQ  + L  +G+V+++T
Sbjct: 30  LKLNSSGRDVMLLQQKLQNVGY--TIKDIDGIFGEETQRIVTQFQKDNNLRATGVVNNAT 87

Query: 162 LEAM 165
             A+
Sbjct: 88  WRAL 91


>gi|291521337|emb|CBK79630.1| FOG: Glucan-binding domain (YG repeat) [Coprococcus catus GD/7]
          Length = 645

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              +   V +AVK FQ RHGL+ +G+ D +T +A+
Sbjct: 448 GAEYTRRVFNAVKSFQSRHGLEATGITDLATWKAL 482


>gi|167039266|ref|YP_001662251.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X514]
 gi|256751676|ref|ZP_05492551.1| spore cortex-lytic enzyme [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913906|ref|ZP_07131223.1| spore cortex-lytic enzyme [Thermoanaerobacter sp. X561]
 gi|307725409|ref|YP_003905160.1| spore cortex-lytic enzyme [Thermoanaerobacter sp. X513]
 gi|166853506|gb|ABY91915.1| cell wall hydrolase, SleB [Thermoanaerobacter sp. X514]
 gi|256749485|gb|EEU62514.1| spore cortex-lytic enzyme [Thermoanaerobacter ethanolicus CCSD1]
 gi|300890591|gb|EFK85736.1| spore cortex-lytic enzyme [Thermoanaerobacter sp. X561]
 gi|307582470|gb|ADN55869.1| spore cortex-lytic enzyme [Thermoanaerobacter sp. X513]
          Length = 236

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           +     +  +  L+ GN+   V +++ RL   G    +  +   F      AV+ FQ  +
Sbjct: 27  AAYDLTKTAMSNLYWGNTGSDVAKVQARLKDWGYYTGA--VDGFFGVRTWLAVRKFQAYN 84

Query: 150 GLDPSGMVDSSTLEAM 165
           GL  +G+VD  T  A+
Sbjct: 85  GLRVTGIVDDDTKVAL 100


>gi|308071058|ref|YP_003872663.1| Periplasmic protease [Paenibacillus polymyxa E681]
 gi|305860337|gb|ADM72125.1| Periplasmic protease [Paenibacillus polymyxa E681]
          Length = 488

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 8/91 (8%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    +S  V+  +  L   G     +     FD   ES+V  FQ +  L  SG++D+
Sbjct: 391 KSLKYNMNSSDVKNAQIILQGLGYRPGREDG--YFDKVTESSVIAFQKQAKLTASGIIDA 448

Query: 160 STLEAMNVPVDLRIR------QLQVNLMRIK 184
            T  AM   +  +IR      QL+  +  I+
Sbjct: 449 KTAAAMEAKLIKKIRDPKNDNQLKQGIEEIR 479


>gi|7480279|pir||T34747 muramoyl-pentapeptide carboxypeptidase - Streptomyces coelicolor
           (fragment)
          Length = 189

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 3/40 (7%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST---LEAM 165
                + A   +AVK FQ  +GL   G+   +T   + A+
Sbjct: 14  SYDGQYGARTAAAVKKFQADYGLGADGVAGPATFSKIYAL 53


>gi|325916291|ref|ZP_08178569.1| putative peptidoglycan binding protein [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325537462|gb|EGD09180.1| putative peptidoglycan binding protein [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 268

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGL 151
           P +    + +G SS  V++++  L   G              +   ++ AV  +Q   GL
Sbjct: 38  PIVDDGTIRIGESSDIVRQVQRTLNAEGFRGADNQPLQEDGVYRLSMQPAVINYQQARGL 97

Query: 152 DPSGMVDSSTLEAM 165
            P+G +D +TL+ +
Sbjct: 98  SPTGDIDPATLQQI 111


>gi|167036615|ref|YP_001664193.1| cell wall hydrolase SleB [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115042|ref|YP_004185201.1| spore cortex-lytic enzyme [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166855449|gb|ABY93857.1| cell wall hydrolase, SleB [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928133|gb|ADV78818.1| spore cortex-lytic enzyme [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 236

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           +     +  +  L+ GN+   V +++ RL   G    +  +   F      AV+ FQ  +
Sbjct: 27  AAYDLTKTAMSNLYWGNTGSDVAKVQARLKDWGYYTGA--VDGFFGVRTWLAVRKFQAYN 84

Query: 150 GLDPSGMVDSSTLEAM 165
           GL  +G+VD  T  A+
Sbjct: 85  GLRVTGIVDDDTKVAL 100


>gi|114567574|ref|YP_754728.1| hypothetical protein Swol_2063 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338509|gb|ABI69357.1| hypothetical protein Swol_2063 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 434

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G +   V  ++++LI  G    +   +  +D      V  FQ  H L+ +G+  + T
Sbjct: 358 LKEGFTGDDVLEMQQQLIALGY---NCQANKVYDGQTRDMVAEFQSDHRLEVTGIATAET 414

Query: 162 LEAMNVPVDLR 172
              +      R
Sbjct: 415 RALLQGVTGGR 425


>gi|328554309|gb|AEB24801.1| N-acetylmuramoyl-L-alanine amidase [Bacillus amyloliquefaciens
           TA208]
 gi|328912705|gb|AEB64301.1| N-acetylmuramoyl-L-alanine amidase [Bacillus amyloliquefaciens LL3]
          Length = 250

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 107 SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
               V +++  L  +         + G+   +     +AVK FQ  +GL   G+    T 
Sbjct: 183 KGEKVTQVQRALAAAYFYPDKHAKNHGIDGIYGPKTANAVKRFQTMNGLQADGIYGPKTK 242

Query: 163 EAM 165
           + +
Sbjct: 243 DKL 245


>gi|251799935|ref|YP_003014666.1| peptidoglycan-binding protein [Paenibacillus sp. JDR-2]
 gi|247547561|gb|ACT04580.1| Peptidoglycan-binding domain 1 protein [Paenibacillus sp. JDR-2]
          Length = 336

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     +  ++  L   G       ++  +D      VK +Q  HGL  +G VDS T ++
Sbjct: 48  GAKGPDIYVIQGMLKGIGSYSG--KINGYYDNTTVRGVKHYQKTHGLPVTGSVDSKTFQS 105

Query: 165 MNVPVDL 171
           +    + 
Sbjct: 106 ITYSYNT 112


>gi|297583387|ref|YP_003699167.1| carboxyl-terminal protease [Bacillus selenitireducens MLS10]
 gi|297141844|gb|ADH98601.1| carboxyl-terminal protease [Bacillus selenitireducens MLS10]
          Length = 496

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL    +S  V+  +  L  +G  DP +     FD     AV+ FQ   GLD +G +   
Sbjct: 408 PLVFDMNSEHVESAQVMLAATGY-DPGREDG-YFDEGTVEAVEAFQEAEGLDVTGEIGEE 465

Query: 161 TLEAMNVPVDLRIRQLQ 177
           T + +    ++ I Q+Q
Sbjct: 466 TADRLQ---EVLIEQIQ 479


>gi|146311284|ref|YP_001176358.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter sp. 638]
 gi|145318160|gb|ABP60307.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter sp. 638]
          Length = 317

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L     GK       + +G++  D  TP + + ++   
Sbjct: 90  LQTLLP-DAPREGLVINLAELRLYYYPPGKKEVTVYPIGIGQLGGDTLTPTMVTTVSDKR 148

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P + I+                        K + + +  V             
Sbjct: 149 ANPTWT-PTANIR---------------------ARYKAQGIDLPAVV------------ 174

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 175 -PAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 220


>gi|254520785|ref|ZP_05132841.1| peptidoglycan-binding domain 1 protein [Clostridium sp. 7_2_43FAA]
 gi|226914534|gb|EEH99735.1| peptidoglycan-binding domain 1 protein [Clostridium sp. 7_2_43FAA]
          Length = 605

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P   L +G+ + +V+ ++E+L         +         F    E +VK+FQ    L P
Sbjct: 324 PGYSLRIGDVNENVKVIQEQLNRVSKNFPAIPRIYPEDGRFGKETEDSVKVFQRVFNLTP 383

Query: 154 SGMVDSSTLE 163
            G+V  +T  
Sbjct: 384 DGVVGRATWY 393



 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 25/74 (33%), Gaps = 14/74 (18%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLD--------PSKGLSVAFDAYVESAVKLFQMRH 149
           P   L  G     V+ L+      G L         P+  +   F    + A+  FQ   
Sbjct: 434 PGYLLKYGARGEKVRELQ------GYLSEISKSYNIPNVSVDGIFGNVTKDAIIKFQRLF 487

Query: 150 GLDPSGMVDSSTLE 163
           GL   G+V  +T  
Sbjct: 488 GLSTDGIVGLATWN 501


>gi|152977393|ref|YP_001376910.1| carboxyl-terminal protease [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152026145|gb|ABS23915.1| carboxyl-terminal protease [Bacillus cytotoxicus NVH 391-98]
          Length = 478

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  ++ L   G +   +     F    ESAVK FQ  + L+ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQQMLKSLGYVPGREDG--YFSKETESAVKAFQNANQLEATGKLDK 446

Query: 160 STLEAMNVPVDLRIR------QLQVNL 180
            T EA+   +  +IR      QLQ  L
Sbjct: 447 KTAEAIQNKIIEKIRSGENDLQLQAAL 473


>gi|139439483|ref|ZP_01772915.1| Hypothetical protein COLAER_01941 [Collinsella aerofaciens ATCC
           25986]
 gi|133775036|gb|EBA38856.1| Hypothetical protein COLAER_01941 [Collinsella aerofaciens ATCC
           25986]
          Length = 301

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 28/84 (33%), Gaps = 12/84 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W  L      LG+              VQ L+  L + G           F  + E+A++
Sbjct: 65  WSALVDASYKLGDRTLYLRMPNFHGADVQALQRALNVLGFACGEDDG--YFGPHTEAALQ 122

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ   GL   GM    T   +N 
Sbjct: 123 QFQENVGLFADGMAFQDTYAYINR 146



 Score = 39.4 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           + P+  G    +V+ ++ RL+  G  +D ++     F A  E AV  F++  GL  
Sbjct: 1   MEPITTGMQGAAVEDVQSRLLQLGYTIDAAEVTDKYFGATTEQAVSTFRLDSGLAA 56


>gi|148242241|ref|YP_001227398.1| hypothetical protein SynRCC307_1142 [Synechococcus sp. RCC307]
 gi|147850551|emb|CAK28045.1| Uncharacterized conserved secreted protein [Synechococcus sp.
           RCC307]
          Length = 181

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            ++   +G+V     V VGR D  TP+    ++R+M NP W  P +
Sbjct: 48  KVKVFHDGQVVATFPVAVGRSDAPTPLGEHTVHRMMKNPVWSSPWT 93


>gi|315654655|ref|ZP_07907561.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
 gi|315491119|gb|EFU80738.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
          Length = 658

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +   V+ +R RL +          S+ FD    +AV  FQ R GL  SG+VD +T   
Sbjct: 445 GWNGTKVREVRARLGV----GVPLNASMTFDRATRNAVVRFQRRSGLPASGVVDYATWVR 500

Query: 165 MNVPV 169
           +    
Sbjct: 501 LTGRP 505


>gi|294637825|ref|ZP_06716097.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Edwardsiella tarda
           ATCC 23685]
 gi|291089024|gb|EFE21585.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Edwardsiella tarda
           ATCC 23685]
          Length = 306

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 64/198 (32%), Gaps = 49/198 (24%)

Query: 196 VLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G K  +   + +G++ R TP+   + + R    P W  P   + +
Sbjct: 101 IVINSAEMRLYYYPKGSKTVVVLPIGIGQLGRDTPMNWVTSVQRKKAGPTWT-PTKKMHE 159

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +       + QYL                          P  F      G  N M    +
Sbjct: 160 EY----AANGQYL--------------------------PAVFP----AGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI----- 368
                     H T     F   +R  + GCVR+R+      WL ++ P  +R        
Sbjct: 186 YVGRLYAV--HGTNAN--FGIGLR-VSHGCVRLRDPD--IKWLFENIPVGTRVQFINEPV 238

Query: 369 EEVVKTRKTTPVKLATEV 386
           +  V+   +  +++   +
Sbjct: 239 KATVEPDGSRYIEVHNPL 256


>gi|88812001|ref|ZP_01127254.1| hypothetical protein NB231_06411 [Nitrococcus mobilis Nb-231]
 gi|88790885|gb|EAR21999.1| hypothetical protein NB231_06411 [Nitrococcus mobilis Nb-231]
          Length = 1063

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 8/73 (10%)

Query: 101 PLHLGNSSVSVQRLRERLIISG--------DLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           PL  G    +V+ +++ L+  G        +L P       F   +   VK FQ R+ L 
Sbjct: 370 PLRRGAKGDAVKLVQQALLQWGCDFSSESVNLLPRYRDDGGFGLEMYLGVKEFQERNRLG 429

Query: 153 PSGMVDSSTLEAM 165
             G+V + TL  +
Sbjct: 430 NDGVVGTETLFVL 442


>gi|315657433|ref|ZP_07910315.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315491905|gb|EFU81514.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 658

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +   V+ +R RL +          S+ FD    +AV  FQ R GL  SG+VD +T   
Sbjct: 445 GWNGTKVREVRARLGV----GVPLNASMTFDRATRNAVVRFQRRSGLPASGVVDYATWVR 500

Query: 165 MNVPV 169
           +    
Sbjct: 501 LTGRP 505


>gi|302532517|ref|ZP_07284859.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302441412|gb|EFL13228.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 220

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 21/50 (42%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
                    F A   SAVK +Q  HG+   G    +T+ AM V   +RI 
Sbjct: 75  KAGVAADGLFGAGTRSAVKRWQSTHGVGADGTAGPATMSAMGVSRTVRIA 124



 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 1/48 (2%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L   G L  +  +         +A++ FQ  +GLD  G   + +  A+
Sbjct: 19  LAGLGYL-AADRVDGVDGPATRAALRDFQGDNGLDADGKYGARSELAL 65


>gi|289579365|ref|YP_003477992.1| spore cortex-lytic enzyme [Thermoanaerobacter italicus Ab9]
 gi|289529078|gb|ADD03430.1| spore cortex-lytic enzyme [Thermoanaerobacter italicus Ab9]
          Length = 236

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+   V +++ RL   G    +  +   F      AV+ FQ  +GL+ +G+VD  T  A
Sbjct: 42  GNTGSDVAKVQARLKDWGYYRGA--VDGFFGVRTWLAVRKFQAYNGLNVTGIVDDDTKVA 99

Query: 165 M 165
           +
Sbjct: 100 L 100


>gi|239926863|ref|ZP_04683816.1| hypothetical protein SghaA1_01447 [Streptomyces ghanaensis ATCC
           14672]
 gi|291435208|ref|ZP_06574598.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291338103|gb|EFE65059.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 255

 Score = 46.0 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG---L 151
           P + +  L  G ++  V  L++ LI  G      G +  +     +AV  FQ + G    
Sbjct: 178 PTVELENLQYGKTNGDVVDLQKALIEHGG-KIPAGATGYYGDQTRAAVAAFQRKQGWTGP 236

Query: 152 DPSGMVDSSTLEAMN 166
              G+    T + +N
Sbjct: 237 AADGIPGVETCKRLN 251


>gi|304390171|ref|ZP_07372125.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|304326653|gb|EFL93897.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 635

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +   V+ +R RL +          S+ FD    +AV  FQ R GL  SG+VD +T   
Sbjct: 422 GWNGTKVREVRARLGV----GVPLNASMTFDRATRNAVVRFQRRSGLPASGVVDYATWVR 477

Query: 165 MNVPV 169
           +    
Sbjct: 478 LTGRP 482


>gi|299769283|ref|YP_003731309.1| hypothetical protein AOLE_05195 [Acinetobacter sp. DR1]
 gi|298699371|gb|ADI89936.1| hypothetical protein AOLE_05195 [Acinetobacter sp. DR1]
          Length = 412

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 85/251 (33%), Gaps = 60/251 (23%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 164 KAISSFQQMNGLSPTGDLTKETWDAL-VAKQTKPAFIEYTI------SDADLKGPYAE-S 215

Query: 200 IP-AASLEAVENGKVGLRSTVIVG----------RVDRQTPILHSRINRIMFNPYWVIPR 248
           IP   +L+A   G    R T ++G          +    T        +I+      +P 
Sbjct: 216 IPSDYALQAKMKGLYYTRVTEMLGEKFHIDEAFLKKINPTATFKKAGEKII------VPN 269

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEV-------------------- 286
             ++ D+   +     +     +++ + + + +  F   +                    
Sbjct: 270 --VRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPAGTYKVVGVARN 327

Query: 287 DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            W S  P NF            PG    + +  I   S+ +  +H TP P L +      
Sbjct: 328 PWYSYSPSNFVQGKNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTA--- 383

Query: 340 TSGCVRVRNII 350
           + GC+R+ N  
Sbjct: 384 SHGCIRLTNWD 394


>gi|150397906|ref|YP_001328373.1| lytic murein transglycosylase [Sinorhizobium medicae WSM419]
 gi|150029421|gb|ABR61538.1| lytic murein transglycosylase [Sinorhizobium medicae WSM419]
          Length = 405

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 9/88 (10%)

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
               IA Y  +  R  WP  P   L +         L+ RL   G  D     +  F + 
Sbjct: 325 LADQIAGYAGMQQR--WPR-PDGSLDISEKF----ELQNRLKELGYYDGEVDGN--FGSG 375

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            ++A++ FQ ++GL P G      L A+
Sbjct: 376 SKAAIEAFQAQNGLKPDGQPTQHLLRAL 403


>gi|98647786|gb|ABF58910.1| matrix metalloprotease 1 [Nicotiana tabacum]
          Length = 365

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 32/63 (50%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           H G     + ++++     G +      +  FD  +ESA+K +Q    L+ +G++D+ T+
Sbjct: 51  HAGQKVDGLAKIKKYFYNFGYIPSLSNFTDDFDDALESALKTYQQNFNLNTTGVLDAPTI 110

Query: 163 EAM 165
           + +
Sbjct: 111 QHL 113


>gi|319760542|ref|YP_004124480.1| Protein erfK/srfK [Candidatus Blochmannia vafer str. BVAF]
 gi|318039256|gb|ADV33806.1| Protein erfK/srfK [Candidatus Blochmannia vafer str. BVAF]
          Length = 301

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 64/207 (30%), Gaps = 51/207 (24%)

Query: 189 QKMGLRYVLVNIPAASLEAV---ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                + +++NI    L      +N  + +   + +G    +TP              W+
Sbjct: 83  PNTPHKGIIINIAEMRLYYYPNTKNNNIVMVFPISIGTPTHETPS------------QWI 130

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
              SI  K      ++DP ++   NI     K  E+    +                G  
Sbjct: 131 --TSIKDK------KKDPIWIPTQNIRNEYIKRAEILPLMI--------------LSGPN 168

Query: 306 NAMASTKIEFYSRNNTYMHDTPEP---ILFNNVVRFETSGCVRVRNII-DLDVWL--LKD 359
           N + S  +   +      H +       L   V R    GC+R+R     L   L  L  
Sbjct: 169 NPLGSYALYLGNSYAI--HGSNTNLGIGL--RVTR----GCIRLRTEDIKLLYTLVPLNT 220

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEV 386
              +    I+  + +     +++ T +
Sbjct: 221 RVQFINEPIKIAIDSNGMQYLEIHTPL 247


>gi|154247651|ref|YP_001418609.1| peptidoglycan binding domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154161736|gb|ABS68952.1| Peptidoglycan-binding domain 1 protein [Xanthobacter autotrophicus
           Py2]
          Length = 393

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   ++ L++RL   G       +   +     +AV  FQ   GL  +G +D +T  A
Sbjct: 223 GLSKGEIEALQQRLRDLGY-SEVGRVDGKWGPRTIAAVSAFQATSGLPVTGELDKATAAA 281

Query: 165 MNVP 168
           +   
Sbjct: 282 LTTS 285


>gi|153939027|ref|YP_001390990.1| putative peptidoglycan-binding protein [Clostridium botulinum F
           str. Langeland]
 gi|152934923|gb|ABS40421.1| putative peptidoglycan-binding protein [Clostridium botulinum F
           str. Langeland]
 gi|295319049|gb|ADF99426.1| putative peptidoglycan-binding protein [Clostridium botulinum F
           str. 230613]
          Length = 155

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 23/63 (36%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F      AV+ FQ    L   G V   T 
Sbjct: 85  RQGARGEITKTIQQMLINIGYPVGSYGADGVFGNGTVIAVEAFQRDCNLALDGTVGKDTW 144

Query: 163 EAM 165
           +A+
Sbjct: 145 KAL 147


>gi|312135699|ref|YP_004003037.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor owensensis
           OL]
 gi|311775750|gb|ADQ05237.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor owensensis
           OL]
          Length = 223

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++   V  +++RL   G    S  +   + A +E AV L+Q ++ L  +  +  
Sbjct: 154 RTIYPGDTGEDVMAVQKRLKELGFYSGS--IDGKYGAALEYAVNLYQKKNKLPVTNKITP 211

Query: 160 STLEAM 165
             L  M
Sbjct: 212 YLLRKM 217


>gi|261820249|ref|YP_003258355.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
 gi|261604262|gb|ACX86748.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
          Length = 357

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 56/205 (27%), Gaps = 49/205 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++N     L     G K  +   + +G + + TPI   + + R    P W  
Sbjct: 94  PDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTSVQRKKAGPTWT- 152

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                        +   +Y                                     G  N
Sbjct: 153 ----------PTAKMHAEYAAR------------------------GETLKAVFPAGPDN 178

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            M    +   +      H T     F   +R  + GCVR+    D+  +L  + P  +R 
Sbjct: 179 PMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRL-RADDI-KYLFNNVPVGTRV 231

Query: 367 HI-----EEVVKTRKTTPVKLATEV 386
                  +  V+   +  V++   +
Sbjct: 232 QFINEPVKATVEPDGSRYVEVHNPL 256


>gi|315505824|ref|YP_004084711.1| peptidoglycan-binding domain 1 protein [Micromonospora sp. L5]
 gi|315412443|gb|ADU10560.1| Peptidoglycan-binding domain 1 protein [Micromonospora sp. L5]
          Length = 377

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 7/79 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRE--RLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           L+   W  L      L   S  V  +     L   G  + +      +D    +AVK  Q
Sbjct: 292 LTAPTWETLAP---ELDQKSSGVPVVAAQFMLASKGYAEVTPTGE--YDHATRTAVKDLQ 346

Query: 147 MRHGLDPSGMVDSSTLEAM 165
             HGL P+G + ++T  A+
Sbjct: 347 RLHGLPPNGKISTTTWCAL 365


>gi|302867773|ref|YP_003836410.1| N-acetylmuramoyl-L-alanine amidase family 2 protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302570632|gb|ADL46834.1| N-acetylmuramoyl-L-alanine amidase family 2 [Micromonospora
           aurantiaca ATCC 27029]
          Length = 377

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 7/79 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRE--RLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           L+   W  L      L   S  V  +     L   G  + +      +D    +AVK  Q
Sbjct: 292 LTAPTWETLAP---ELDQKSSGVPVVAAQFMLASKGYAEVTPTGE--YDHATRTAVKDLQ 346

Query: 147 MRHGLDPSGMVDSSTLEAM 165
             HGL P+G + ++T  A+
Sbjct: 347 RLHGLPPNGKISTTTWCAL 365


>gi|251790932|ref|YP_003005653.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
 gi|247539553|gb|ACT08174.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
          Length = 358

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 42/162 (25%), Gaps = 42/162 (25%)

Query: 189 QKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++N     L     G K  +   + +G++ + TPI   + + R    P W  
Sbjct: 94  PDTPREGIVINSAEMRLYYFPKGSKTVVVLPIGIGQLGKDTPINWVTSVQRKKERPTWT- 152

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                            +Y                                     G  N
Sbjct: 153 ----------PTAAMHAEYAARGEF------------------------LPKVYPAGPDN 178

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            M    +   +      H T     F   +R  + GCVR+R+
Sbjct: 179 PMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLRD 215


>gi|332712211|ref|ZP_08432139.1| hypothetical protein LYNGBM3L_72340 [Lyngbya majuscula 3L]
 gi|332349017|gb|EGJ28629.1| hypothetical protein LYNGBM3L_72340 [Lyngbya majuscula 3L]
          Length = 205

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 53/168 (31%), Gaps = 52/168 (30%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           +++  +       +++ +    L      K+     V +G+   +TP  + ++ +++ NP
Sbjct: 68  LRQEEDFFNNTPRLVIKLSERRLYVYRGDKLEASYPVAIGQPGWETPTGNFQVTQMVQNP 127

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W  P +                            G+ V                    P
Sbjct: 128 VWKHPLT----------------------------GEVV-------------------AP 140

Query: 303 GKINAMASTKIEFYSRNNTY--MHDTPEPILFNNVVRFETSGCVRVRN 348
           G  N +    + F+S    Y   H T +  L        + GC+R+RN
Sbjct: 141 GPENPLGPRWMAFWSDGTNYIGFHGTNDEELVGQ---AVSHGCIRMRN 185


>gi|326332132|ref|ZP_08198416.1| peptidoglycan binding domain-containing protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950103|gb|EGD42159.1| peptidoglycan binding domain-containing protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 289

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 25/137 (18%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V+ L+ RL   G  +   G++  +      AV  FQ + G+  +G VD +TL+ 
Sbjct: 85  GDSGDDVRDLQARLKQIGWFN--AGVTGFYGNVTTEAVSGFQAKRGIAVTGFVDQTTLDR 142

Query: 165 M-------------NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +             N P  +   +L            + +  R + ++   + L  V  G
Sbjct: 143 LHAMTREPTEAELTNAPPPVPAGKLD----------PRCLTGRVMCIDKSTSMLRWVVGG 192

Query: 212 KVGLRSTVIVGRVDRQT 228
            V +   V  G  +  T
Sbjct: 193 AVQMSVEVRFGSQELPT 209


>gi|242240654|ref|YP_002988835.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
 gi|242132711|gb|ACS87013.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
          Length = 366

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 56/205 (27%), Gaps = 49/205 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++N     L     G K  +   + +G++ + TPI   + + R    P W  
Sbjct: 102 PDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGQLGKDTPINWVTSVQRKKERPTWT- 160

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                            +Y                                     G  N
Sbjct: 161 ----------PTAAMHAEYAARGEF------------------------LPKIYPAGPDN 186

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            M    +   +      H T     F   +R  + GCVR+R+      +L  + P  +R 
Sbjct: 187 PMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLRDKD--IKFLFSNVPVGTRV 239

Query: 367 HI-----EEVVKTRKTTPVKLATEV 386
                  +  V+   +  V++   +
Sbjct: 240 QFINEPVKATVEPDGSRYVEVHNPL 264


>gi|154686539|ref|YP_001421700.1| hypothetical protein RBAM_021080 [Bacillus amyloliquefaciens FZB42]
 gi|154352390|gb|ABS74469.1| SleB [Bacillus amyloliquefaciens FZB42]
          Length = 289

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVDSS 160
           +  G +   V  L+ RL  +G  +    +   +      AV+ FQ + G+ P  G+V + 
Sbjct: 35  IQRGATGDDVIELQARLQYNGFYNG--KIDGVYGWTTYWAVRNFQEKFGMKPVDGLVGAK 92

Query: 161 TLEAM 165
           T + +
Sbjct: 93  TKQVL 97


>gi|126642408|ref|YP_001085392.1| hypothetical protein A1S_2371 [Acinetobacter baumannii ATCC 17978]
          Length = 396

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 64/253 (25%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 148 KAIASFQQMNGLSPTGELTKETWDAL-VAKQNKPAFIEYTI------TDADLKGPYAQ-S 199

Query: 200 IP-AASLEAVENGKVGLRSTV--IVG----------RVDRQTPILHSRINRIMFNPYWVI 246
           IP   +L+A   G     + V  ++G          +    T        +I+      +
Sbjct: 200 IPSDYALQAKMKG--LYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKII------V 251

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEV------------------ 286
           P   ++ D+   +     +     +++ + + + +  F   +                  
Sbjct: 252 PN--VRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVA 309

Query: 287 --DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
              W S  P NF            PG    + +  I   S+ +  +H TP P L +    
Sbjct: 310 RNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTA- 367

Query: 338 FETSGCVRVRNII 350
             + GC+R+ N  
Sbjct: 368 --SHGCIRLTNWD 378


>gi|225574799|ref|ZP_03783409.1| hypothetical protein RUMHYD_02876 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037999|gb|EEG48245.1| hypothetical protein RUMHYD_02876 [Blautia hydrogenotrophica DSM
           10507]
          Length = 619

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 31/71 (43%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+  ++ LI  G      G    F    ++A + FQ  +GL+  G    +T
Sbjct: 390 LCEGDQGEAVKVYQKNLIEIGYNCGKNGADGDFGPATKAATQEFQGDYGLEQDGNAGPAT 449

Query: 162 LEAMNVPVDLR 172
            + ++  V  +
Sbjct: 450 QKKLSAEVKKK 460


>gi|307943783|ref|ZP_07659127.1| N-acetylmuramoyl-L-alanine amidase [Roseibium sp. TrichSKD4]
 gi|307773413|gb|EFO32630.1| N-acetylmuramoyl-L-alanine amidase [Roseibium sp. TrichSKD4]
          Length = 258

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G++   V R RE L    D         L+  FD  +E     FQ   G+   
Sbjct: 149 PDGLLRRGDAGPDVHRWREDLDFYRDKIGHPYPVPLTGPFDHTLELVTMWFQKERGIQVD 208

Query: 155 GMVDSSTLEAM 165
           G+V    LE M
Sbjct: 209 GIVGPQVLEEM 219


>gi|167464747|ref|ZP_02329836.1| Sporulation specific N-acetylmuramoyl-L-alanineamidase, spore
           cortex-lytic enzyme [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322382328|ref|ZP_08056235.1| spore cortex-lytic enzyme-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153681|gb|EFX46056.1| spore cortex-lytic enzyme-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 266

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G     V  L+ R+   G           +      +VK FQ   GL   G+V   T
Sbjct: 39  KYGTKGSDVYELQGRMKFLGFYKGKVDGDFGY--QTLQSVKCFQGEFGLQVDGLVGPKT 95


>gi|83858925|ref|ZP_00952447.1| N-acetylmuramoyl-L-alanine amidase [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853748|gb|EAP91600.1| N-acetylmuramoyl-L-alanine amidase [Oceanicaulis alexandrii
           HTCC2633]
          Length = 245

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 17/104 (16%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQD---------ILSRG--GWP-ELPIR--PLHL 104
           +   I S  PI + + I  ++ A    QD         +   G   WP   P    P   
Sbjct: 113 LSRAILSRHPIAACDVIGHSDLAPDRKQDPGEKFPWKRLAENGVGLWPDPAPAGFAPSAP 172

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           G+   +V+ LR+ L   G        + A+D  ++S V  FQ R
Sbjct: 173 GDDGEAVEALRQSLFEIGY---GVARTGAYDDALKSVVLAFQRR 213


>gi|119718549|ref|YP_925514.1| peptidoglycan binding domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539210|gb|ABL83827.1| Peptidoglycan-binding domain 1 protein [Nocardioides sp. JS614]
          Length = 485

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG++ ++V+RL+  L  +G +  S  ++  F A    AV+ +Q + G + SG+    T
Sbjct: 418 LKLGSTGLAVRRLQRTLNAAG-VSDSVRMNGMFKAETADAVRAYQQQVGTEVSGVAGYRT 476

Query: 162 LEAM 165
             A+
Sbjct: 477 WRAL 480


>gi|298292778|ref|YP_003694717.1| Lysozyme [Starkeya novella DSM 506]
 gi|296929289|gb|ADH90098.1| Lysozyme [Starkeya novella DSM 506]
          Length = 508

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 93  GWPELPIRPLHLGNSS------VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           G P+L    L +G           +  ++ RL+  G       +   F+   ++AV+ FQ
Sbjct: 249 GAPKLDRPLLLVGMEDDEENPGKDIAEMQARLVELGYYRG--PVDGIFNPATDAAVREFQ 306

Query: 147 MRH-G-LDPSGMVDSSTLEAM 165
               G  +  G V   T + +
Sbjct: 307 TEFFGWSEADGRVGPKTWKKL 327


>gi|296330269|ref|ZP_06872750.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305676126|ref|YP_003867798.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152537|gb|EFG93405.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305414370|gb|ADM39489.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 480

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 23/112 (20%)

Query: 82  IAFYQDILSRGGW-------PELPIR--------------PLHLGNSSVSVQRLRERLII 120
           +  Y+ +   G W       P + I+              PL +  ++  V+   + L+ 
Sbjct: 351 LTLYKWLTPNGNWIHKKGIEPTIAIKQPDYFSAGPLQLKEPLKVDMNNEDVKH-AQVLLK 409

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
               DP +     F   ++ AV  FQ ++ LD +G++D+ T EA+N  V+ +
Sbjct: 410 GLSFDPGRDDG-YFSKDMKKAVMAFQDQNKLDKTGVIDTRTAEALNQLVEKK 460


>gi|194016849|ref|ZP_03055462.1| YvjB [Bacillus pumilus ATCC 7061]
 gi|194011455|gb|EDW21024.1| YvjB [Bacillus pumilus ATCC 7061]
          Length = 470

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 10/100 (10%)

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            Q + ++  Y  +      P L P +   L ++   V+  ++       LD     +  +
Sbjct: 362 PQVKASLPSYAKL------PYLSPKKTYQLNDNGDEVKAAQKMFQA---LDYKAKANGEY 412

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           D   ++ VK FQ  + L   G++   T   +   +  +++
Sbjct: 413 DQAFQTIVKSFQTDNDLKADGILTGDTTTVLMTKIQNKLK 452


>gi|302872405|ref|YP_003841041.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575264|gb|ADL43055.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 223

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++   V  ++ RL   G    S  +   + A +E AV L+Q ++ L  +  +  
Sbjct: 154 RTIYPGDTGEDVMAVQRRLKKLGFYSGS--IDGKYGAALEYAVNLYQKKNKLPVTNKITP 211

Query: 160 STLEAM 165
             L  M
Sbjct: 212 YLLRKM 217


>gi|291548077|emb|CBL21185.1| Uncharacterized protein conserved in bacteria [Ruminococcus sp.
           SR1/5]
          Length = 411

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 37/111 (33%), Gaps = 19/111 (17%)

Query: 135 DAYVESAVKLFQMRHG-------------LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           D       + FQ   G             +D  G V   T E   +    +  +  V  M
Sbjct: 214 DHDTVGTERQFQTTSGRTVSVSGSAYGWKIDQDGEVAQLTQE---IQSGAQTTREPVYSM 270

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG---RVDRQTP 229
           R        +G  Y+ V++    +   ++G V   S ++ G      R+TP
Sbjct: 271 RANSYGVNDLGNTYIEVDLTEQYMWYYQDGNVIFESDIVSGLASDPKRKTP 321


>gi|167647642|ref|YP_001685305.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Caulobacter sp. K31]
 gi|167350072|gb|ABZ72807.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Caulobacter sp. K31]
          Length = 243

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 29/82 (35%), Gaps = 9/82 (10%)

Query: 89  LSRGGW---PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
              G W   P  P  PL  G     V  L+  L   G   P  G    +D +  + V  F
Sbjct: 158 AGHGLWVEPPPSPGAPLGQGEEGTGVFALQAGLTRLGYNCPPSGN---YDEWTATVVAAF 214

Query: 146 QMRHGLDP--SGMVDSSTLEAM 165
           Q RH L     G+ D  T   +
Sbjct: 215 Q-RHWLQTRFDGVADGETRARL 235


>gi|23099945|ref|NP_693411.1| carboxy-terminal processing protease [Oceanobacillus iheyensis
           HTE831]
 gi|22778176|dbj|BAC14446.1| carboxy-terminal processing protease [Oceanobacillus iheyensis
           HTE831]
          Length = 488

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 8/89 (8%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           P  L  +S  +  ++  L   G    +      FD     AVK FQ  + L+ +G VDS 
Sbjct: 400 PFSLDETSEEIANMQVMLTGLGY--DTGRTDGYFDEQTAEAVKDFQADNDLEATGEVDSE 457

Query: 161 TLEAMNVPVDLRIR------QLQVNLMRI 183
           T   +   +  +IR      QL  +L  +
Sbjct: 458 TGGLIETQLVEKIRNGEDDQQLDTSLEEL 486


>gi|16129076|ref|NP_415631.1| L,D-transpeptidase linking Lpp to murein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89107959|ref|AP_001739.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|3025065|sp|P75954|YCFS_ECOLI RecName: Full=Probable L,D-transpeptidase YcfS; Flags: Precursor
 gi|1787356|gb|AAC74197.1| L,D-transpeptidase linking Lpp to murein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|4062682|dbj|BAA35928.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
          Length = 320

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 92  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 150

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I  +             K   I +                          
Sbjct: 151 ANPTWTPTANIRAR------------YKAQGIEL-----------------------PAV 175

Query: 300 QDPGKINAMASTKIEFYSRNNTYM-HDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y+ H T     F   +R  +SGC+R+R+
Sbjct: 176 VPAGLDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|291451493|ref|ZP_06590883.1| peptidoglycan-binding domain 1 [Streptomyces albus J1074]
 gi|291354442|gb|EFE81344.1| peptidoglycan-binding domain 1 [Streptomyces albus J1074]
          Length = 319

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP +       G     V    + L+   G      G    F    ++AV+ FQ   GL+
Sbjct: 184 WPTV-----RSGARGPDVHA-AQHLVSHHGFATDPDG---IFGPATQTAVQEFQTSVGLE 234

Query: 153 PSGMVDSSTLEAMNVPV 169
            +G+V++ T   + V V
Sbjct: 235 ATGVVNAQTWPRLVVTV 251



 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 94  WPE--LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           WP   + +R    G+   +V+  + + +  G      G    F    + A +  Q    L
Sbjct: 244 WPRLVVTVRSGDSGDRGEAVRAAQRQFVKHGHPITVDG---VFGPRTDEAARAVQRAAKL 300

Query: 152 DPSGMVDSSTLEAM 165
              G+V   T  A+
Sbjct: 301 TVDGVVGQQTWRAL 314


>gi|239979629|ref|ZP_04702153.1| putative bifunctional protein, precursor :
           N-acetylmuramoyl-L-alanine amidase; Muramoylpentapeptide
           [Streptomyces albus J1074]
          Length = 318

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP +       G     V    + L+   G      G    F    ++AV+ FQ   GL+
Sbjct: 183 WPTV-----RSGARGPDVHA-AQHLVSHHGFATDPDG---IFGPATQTAVQEFQTSVGLE 233

Query: 153 PSGMVDSSTLEAMNVPV 169
            +G+V++ T   + V V
Sbjct: 234 ATGVVNAQTWPRLVVTV 250



 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 94  WPE--LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           WP   + +R    G+   +V+  + + +  G      G    F    + A +  Q    L
Sbjct: 243 WPRLVVTVRSGDSGDRGEAVRAAQRQFVKHGHPITVDG---VFGPRTDEAARAVQRAAKL 299

Query: 152 DPSGMVDSSTLEAM 165
              G+V   T  A+
Sbjct: 300 TVDGVVGQQTWRAL 313


>gi|284052766|ref|ZP_06382976.1| ErfK/YbiS/YcfS/YnhG [Arthrospira platensis str. Paraca]
 gi|291565859|dbj|BAI88131.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 208

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 43/162 (26%), Gaps = 52/162 (32%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           V++ +    +             V VG+   +TP    ++   + NP W           
Sbjct: 84  VVLRLGERRVYVYRGESQIASYPVAVGKPGWETPTGTFQVTEKVENPQW----------- 132

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--TKI 313
                ++P                EV                     G  +A+       
Sbjct: 133 -----ENP-------------WTGEVRP------------------AGPNSALGLRWIGF 156

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
               ++    H TP            + GCVR+RN   + ++
Sbjct: 157 WHDGKDAIGFHGTPTVNSIGQ---AASHGCVRMRNEDIVALF 195


>gi|312127038|ref|YP_003991912.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777057|gb|ADQ06543.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 223

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++   V  ++ RL   G    S  +   + A +E AV L+Q ++ L  +  +  
Sbjct: 154 RTIYPGDTGEDVMAVQRRLKELGFYSGS--IDGKYGAALEYAVNLYQKKNKLPVTNKITP 211

Query: 160 STLEAM 165
             L  M
Sbjct: 212 YLLRKM 217


>gi|266625139|ref|ZP_06118074.1| putative peptidoglycan binding domain protein [Clostridium
           hathewayi DSM 13479]
 gi|288862959|gb|EFC95257.1| putative peptidoglycan binding domain protein [Clostridium
           hathewayi DSM 13479]
          Length = 857

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++ + V+ L++ L I         +  AF    ++AV+ FQ   GL   G+V + T
Sbjct: 3   LKNGDTGIQVKYLQQGLKIM--CCNPGSIDSAFGPGTQAAVEKFQEEWGLTVDGIVGNDT 60

Query: 162 LEAM 165
              +
Sbjct: 61  WNCL 64



 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L LG++    + L+      G   P  G    F     +A   FQ  HGL+  G+V 
Sbjct: 394 SSTLKLGSNGSLTRYLQRLFNELGYQIPIDG---IFSQETHNAALSFQTTHGLEADGIVG 450

Query: 159 SSTLEAM 165
             T   +
Sbjct: 451 GGTWRKL 457



 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 13/86 (15%)

Query: 101 PLHLGNSSVSVQRLRERLIIS----GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           PL +G+    V  L+  L I     G LD        F +    AVK FQ ++G+  +G+
Sbjct: 134 PLSIGDRGDYVLYLQYGLRILCCSPGALDG------VFGSGTAEAVKKFQAKYGITDNGI 187

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMR 182
            D++T   +   +     +L   L R
Sbjct: 188 ADTTTWNTLKGQITDIQSRL---LER 210



 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             ++ +++ L   G    +  ++        +AV  FQ    L   GMV ++T   +
Sbjct: 66  AEIKPIQQALKNKGFYTGA--ITGIAKDSTYNAVIRFQSSRDLTADGMVGAATRARL 120



 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL  G+    V   +  L IS       G    +    +SAV  ++ R GL   GMVD+ 
Sbjct: 265 PLKTGSRGPRVLYFQYALRIS--CINPNGTDGVYGPGTKSAVDRYKTRKGLTADGMVDTV 322

Query: 161 TLEAM 165
           T E M
Sbjct: 323 TWEKM 327



 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 16/101 (15%)

Query: 69  IISKETIAQTEKAIAFY----QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           +    T    +K  A Y      I     W  L  +          +  ++ RL+     
Sbjct: 164 VFGSGTAEAVKKFQAKYGITDNGIADTTTWNTLKGQ----------ITDIQSRLLERNY- 212

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                +     + +   +K +Q  + L   G V  +T E +
Sbjct: 213 -SIAIVDGLATSALVETIKKYQEANWLTADGQVGPATYELL 252


>gi|167630819|ref|YP_001681318.1| peptidoglycan-binding domain protein, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167593559|gb|ABZ85307.1| peptidoglycan-binding domain protein, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 389

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 14/94 (14%)

Query: 98  PIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P  P    L  G++  +V+RL+  L  +  L     ++  +D   E+AV+ FQ   G++P
Sbjct: 169 PAGPTCPELGRGSTGEAVRRLQRLLDAAQYL---VTVTGVYDQATENAVRTFQSEVGINP 225

Query: 154 SGMVDSSTLEAMN-------VPVDLRIRQLQVNL 180
           +G  +  T  ++         P   RI ++  N+
Sbjct: 226 TGRANLETWLSLGESCGDLPRPPRHRITRVIDNI 259


>gi|91974696|ref|YP_567355.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris BisB5]
 gi|91681152|gb|ABE37454.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris BisB5]
          Length = 454

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 10/85 (11%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + +  G      + ++  L  +GD +       +    + +A+K FQ  HG  P+
Sbjct: 47  PAETAKSMAQGER----EAIQSDLAWTGDYNGVINGEAS--DRMVAAIKAFQNNHGAKPT 100

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVN 179
           G+++      +        R+LQ N
Sbjct: 101 GVLNPQERAQL----AEAARKLQGN 121


>gi|170738380|ref|YP_001767035.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
 gi|168192654|gb|ACA14601.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
          Length = 337

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 68/219 (31%), Gaps = 60/219 (27%)

Query: 151 LDPSGMVDSS----TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           L+P   +  +    T+ A  VP         +   R  K L ++  +  ++V   A  + 
Sbjct: 166 LNPDKDLGRAGTVVTVAA--VPP--------LATDRPGKGLPEEPKVARIVVGKEALQVR 215

Query: 207 AVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
           A   +G +       VG  ++  P    ++  +  NP +                 DP+Y
Sbjct: 216 AYGGDGALLAVYPASVGSEEKPAPEGRFKVEGVTLNPTYT---------------YDPKY 260

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY-SRNNTYMH 324
                                         F     PG  N +    IE          H
Sbjct: 261 AFK--------------------GVEATRKFTI--KPGPNNPVGLVWIELSAESYGI--H 296

Query: 325 DTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            TPEP     + + E+ GC+R+ N    DL + + +   
Sbjct: 297 GTPEP---EKIGKSESHGCIRLTNWDARDLALHVARGAT 332


>gi|290955222|ref|YP_003486404.1| glycosyl transferase [Streptomyces scabiei 87.22]
 gi|260644748|emb|CBG67833.1| putative glycosyl transferase [Streptomyces scabiei 87.22]
          Length = 448

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
                + A  E+ V+ FQ   GL   G++  +T  A+N
Sbjct: 77  AADGTYGAATEARVRDFQRCAGLGVDGVLGPNTWSALN 114


>gi|75910593|ref|YP_324889.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75704318|gb|ABA23994.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 313

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   + A  E+A+K FQ ++GL   G++   + + +
Sbjct: 276 VDGIYGAQTEAAIKRFQRQNGLLADGIIGPMSWQKL 311



 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +P  P    N   S+ RL++   RL I+   + S   +   +A  + A++ FQ   GL+
Sbjct: 174 PVPSVPDEEQNIDTSILRLQKSLNRLKITDRSNKSLVENGQLNAETKFAIERFQGIVGLE 233

Query: 153 PSGMVDSSTLEAMNVPVDLRI 173
            +G+V+ +T  A+N+ +  RI
Sbjct: 234 KTGIVNEATWNAINLILAKRI 254


>gi|28210881|ref|NP_781825.1| tonB-dependent receptor protein [Clostridium tetani E88]
 gi|28203320|gb|AAO35762.1| tonB-dependent receptor protein [Clostridium tetani E88]
          Length = 312

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 18/108 (16%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAM---NVPVDLRIRQLQVNLMRIKKLLEQKMGLRY-V 196
           AV  FQ    L+  G+V   T + +   N      +               + +   Y +
Sbjct: 130 AVLQFQSSKNLNCDGIVGPETSKYLMNENNNPSDSV--------------PETLKHGYSM 175

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           ++N     L    +GKV  +  V  G     TP     I   + NP W
Sbjct: 176 VINKDKRILTVYLDGKVYKKYPVAAGASPSYTPEGKFTIVSKLINPTW 223


>gi|325568168|ref|ZP_08144609.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus casseliflavus ATCC
           12755]
 gi|325158369|gb|EGC70520.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus casseliflavus ATCC
           12755]
          Length = 465

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 20/39 (51%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            G  Y+ V++    +   ++G++ L + +I G+    TP
Sbjct: 344 FGNTYIEVDLKNQHMWYYKDGELVLDTKIISGKPATPTP 382


>gi|311897287|dbj|BAJ29695.1| hypothetical protein KSE_38990 [Kitasatospora setae KM-6054]
          Length = 605

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 3/71 (4%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP   +R          V   + RL   G    + G    +        + FQ RHGL  
Sbjct: 535 WPGRYLRTQTPMLHGDDVLMWQRRLAARGWSISADG---WYGPDSARVCRAFQQRHGLAV 591

Query: 154 SGMVDSSTLEA 164
            G+V  +T +A
Sbjct: 592 DGVVGPATWDA 602


>gi|253575916|ref|ZP_04853250.1| carboxyl-terminal protease [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844710|gb|EES72724.1| carboxyl-terminal protease [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 483

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 8/91 (8%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +          ++  +  L   G  +P +     FD   E A+K FQ    L  +G++D+
Sbjct: 390 KTYKYDMLGEDIKSAQTMLDGLGY-NPGRKDG-YFDKNTEKALKKFQTDQKLTANGVLDA 447

Query: 160 STLEAMNVPVDLRIR------QLQVNLMRIK 184
            T EA+   +  +IR      QL   L  ++
Sbjct: 448 KTAEALEASIIQQIRDPKNDMQLNRALEIMR 478


>gi|257877900|ref|ZP_05657553.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus casseliflavus
           EC20]
 gi|257812066|gb|EEV40886.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus casseliflavus
           EC20]
          Length = 465

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 20/39 (51%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            G  Y+ V++    +   ++G++ L + +I G+    TP
Sbjct: 344 FGNTYIEVDLKNQHMWYYKDGELVLDTKIISGKPATPTP 382


>gi|269140434|ref|YP_003297135.1| ErfK/YbiS/YcfS/YnhG family protein [Edwardsiella tarda EIB202]
 gi|267986095|gb|ACY85924.1| ErfK/YbiS/YcfS/YnhG family protein [Edwardsiella tarda EIB202]
 gi|304560228|gb|ADM42892.1| L,D-transpeptidase YbiS [Edwardsiella tarda FL6-60]
          Length = 306

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 63/198 (31%), Gaps = 49/198 (24%)

Query: 196 VLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G K  +   + +G++ R TP+   + + R    P W  P   + +
Sbjct: 101 IVINSAEMRLYYYPKGSKTVIVLPIGIGQLGRDTPMNWVTSVQRKKAGPTWT-PTKKMHE 159

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +       + QYL                          P  F      G  N M    +
Sbjct: 160 EY----AANGQYL--------------------------PAVFP----AGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI----- 368
                     H T     F   +R  + GCVR+R+      WL  + P  +R        
Sbjct: 186 YVGRLYAV--HGTNAN--FGIGLR-VSHGCVRLRDPD--IKWLFDNVPVGTRVQFIDEPV 238

Query: 369 EEVVKTRKTTPVKLATEV 386
           +  V+   +  +++   +
Sbjct: 239 KATVEPDGSRYIEVHNPL 256


>gi|89097834|ref|ZP_01170721.1| hypothetical protein B14911_22882 [Bacillus sp. NRRL B-14911]
 gi|89087336|gb|EAR66450.1| hypothetical protein B14911_22882 [Bacillus sp. NRRL B-14911]
          Length = 496

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L + +SS  V+  +E L   G           FD   + AV   Q  H L+ +G++
Sbjct: 404 PESELKVSSSSAEVKAAQEMLKALGFEPG--RTDGFFDEKTKQAVIQLQKAHKLEQTGVI 461

Query: 158 -DSSTLEAM 165
              +T++ M
Sbjct: 462 TGDTTVKMM 470


>gi|318060982|ref|ZP_07979703.1| hypothetical protein SSA3_23760 [Streptomyces sp. SA3_actG]
          Length = 266

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-G 155
           +    L  G+S   V +L ERL   G           FD  +E A+  +Q+  G     G
Sbjct: 191 VTQAVLRRGDSGPEVAKLEERLRAVGIYPGRDDG--RFDRGLEYALMTYQVTRGASDEHG 248

Query: 156 MVDSSTLEAM 165
           +  + T   +
Sbjct: 249 VYGADTRTKL 258


>gi|295106181|emb|CBL03724.1| Putative peptidoglycan-binding domain-containing protein
           [Gordonibacter pamelaeae 7-10-1-b]
          Length = 301

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 12/82 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W  L      LG+              V+ L++ L   G    +      F AY E A++
Sbjct: 66  WSALVDASYFLGDRTLYLRMPHFHGHDVEELQQALGALGFACGANDG--IFGAYTELALR 123

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            FQ+  GL   G+  + T  A+
Sbjct: 124 KFQLNLGLPSDGIAGAYTYAAI 145



 Score = 39.0 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P+  +   ++  +V+ +++RL   G LD +  +  AF     +AV+ F ++ GL  
Sbjct: 3   PMETIKRHDTGAAVEDVQQRLATIGLLDQAA-IDGAFGEQTAAAVRAFCIQAGLPA 57


>gi|298492145|ref|YP_003722322.1| cell wall hydrolase/autolysin ['Nostoc azollae' 0708]
 gi|298234063|gb|ADI65199.1| cell wall hydrolase/autolysin ['Nostoc azollae' 0708]
          Length = 313

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 10/72 (13%)

Query: 96  ELPIRPLHLGN--SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           ++  + L  GN  S   ++ L+ R                +    E+A+K FQ ++GL  
Sbjct: 248 QILSKRLVQGNQTSGPIIRYLQYR--------VGADPDGIYGLNTEAAIKKFQQQNGLTA 299

Query: 154 SGMVDSSTLEAM 165
            G+V + T + +
Sbjct: 300 DGIVGAPTWQKL 311



 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 106 NSSVSVQRLRERLIISG--DLDPSKGLSVAFD-AYVESAVKLFQMRHGLDPSGMVDSSTL 162
           N+  S+ RL++ L      D +        F      SAV+ FQ   G+ PSGM +S+T 
Sbjct: 184 NTDTSILRLQKALNQLNITDKNGKPLDEDNFTGPATTSAVEKFQKMAGIIPSGMANSTTW 243

Query: 163 EAMNVPVDLRIRQ 175
            A+N  +  R+ Q
Sbjct: 244 NAINQILSKRLVQ 256


>gi|148655791|ref|YP_001275996.1| peptidoglycan binding domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148567901|gb|ABQ90046.1| Peptidoglycan-binding domain 1 protein [Roseiflexus sp. RS-1]
          Length = 974

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 1/66 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R +  G+    V   ++ L   G   P   +   F      A   FQ   GL P G++  
Sbjct: 569 RMISYGSQGQDVADAQQLLNQHGAAPP-LVVDGIFGPKTRQATIEFQKSRGLAPDGIIGP 627

Query: 160 STLEAM 165
            T  A+
Sbjct: 628 LTWGAL 633


>gi|52080803|ref|YP_079594.1| spore cortex-lytic enzyme [Bacillus licheniformis ATCC 14580]
 gi|52786173|ref|YP_092002.1| hypothetical protein BLi02431 [Bacillus licheniformis ATCC 14580]
 gi|52004014|gb|AAU23956.1| spore cortex-lytic enzyme [Bacillus licheniformis ATCC 14580]
 gi|52348675|gb|AAU41309.1| SleB [Bacillus licheniformis ATCC 14580]
          Length = 321

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G  +    +   +      AV+ FQ + GL    
Sbjct: 31  AFSEQVIQRGATGDDVIELQARLQYNGYYNG--RIDGVYGWATYWAVRNFQNQFGLRDTD 88

Query: 155 GMVDSSTLEAM 165
           G+V   T   +
Sbjct: 89  GLVGPKTKRLL 99


>gi|154506082|ref|ZP_02042820.1| hypothetical protein RUMGNA_03624 [Ruminococcus gnavus ATCC 29149]
 gi|153793581|gb|EDN76001.1| hypothetical protein RUMGNA_03624 [Ruminococcus gnavus ATCC 29149]
          Length = 432

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++L+E+L +I+G     P       +      AV+ FQ   GL  +
Sbjct: 348 PGYTLENGSSGAKVRQLQEQLNVIAGAYPALPKIQTDGVYGPATAEAVRKFQEIFGLPQT 407

Query: 155 GMVDSSTLE 163
           G VD  T  
Sbjct: 408 GTVDYRTWY 416


>gi|149377700|ref|ZP_01895435.1| hypothetical protein MDG893_12425 [Marinobacter algicola DG893]
 gi|149357985|gb|EDM46472.1| hypothetical protein MDG893_12425 [Marinobacter algicola DG893]
          Length = 122

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             L+  L  +G       +S   D    SA+  FQ   GL+ SG++D +T +A+ +
Sbjct: 15  VALKNALYAAGY--DINNVSPQMDDSTRSALTAFQKDQGLNASGVLDDATKKALGM 68


>gi|332669658|ref|YP_004452666.1| hypothetical protein Celf_1144 [Cellulomonas fimi ATCC 484]
 gi|332338696|gb|AEE45279.1| hypothetical protein Celf_1144 [Cellulomonas fimi ATCC 484]
          Length = 547

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
             R L  G S   V +L++ L   G +D     S  +DA   +AV+    R G +P
Sbjct: 124 TYRSLRAGVSGPDVAQLKQALTSLG-IDVGDAGSATYDARTAAAVRALYQRVGYEP 178


>gi|224367146|ref|YP_002601309.1| putative secretion activating protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223689862|gb|ACN13145.1| putative secretion activating protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 247

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 8/71 (11%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +  R +  G+  + V++L+E L I         +   F    E+ +K +Q  +GL+P 
Sbjct: 181 PSVDYRIVKKGSRGLWVRKLQEALKI--------QVDGRFTGDTEATLKAWQQANGLEPD 232

Query: 155 GMVDSSTLEAM 165
           G+   +T  ++
Sbjct: 233 GIAGRNTYRSL 243


>gi|56964579|ref|YP_176310.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
 gi|56910822|dbj|BAD65349.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
          Length = 338

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + L+  L ++G          AF    E AV+ FQ   GL   G+   +T 
Sbjct: 277 RRGAKGNLTRVLQALLYLAG--HNPGPFDGAFGDGTEKAVRAFQKAKGLGVDGIAGKNTW 334

Query: 163 EAM 165
           +A+
Sbjct: 335 KAL 337


>gi|261212669|ref|ZP_05926953.1| VgrG protein [Vibrio sp. RC341]
 gi|260837734|gb|EEX64411.1| VgrG protein [Vibrio sp. RC341]
          Length = 1050

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++ ++ Y+    
Sbjct: 671 IDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQVSAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F    ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGGKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V   TL A+
Sbjct: 774 PSHQTHPSYSIG-PVDGIVGKGTLLAL 799


>gi|114706955|ref|ZP_01439854.1| hypothetical protein FP2506_02849 [Fulvimarina pelagi HTCC2506]
 gi|114537505|gb|EAU40630.1| hypothetical protein FP2506_02849 [Fulvimarina pelagi HTCC2506]
          Length = 269

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           +++  G P+  +  +    +   +  L++ L  +G    ++ +   F     +A++ FQ 
Sbjct: 72  LIATRGMPQPSLNTVEATKADPLLAELQQALAETGHY--TRAIDGRFGPGTRAAIERFQH 129

Query: 148 RHGLDPSGMVDSSTLEA 164
            +GL   G   ++ L  
Sbjct: 130 ENGLSVDGRPSTALLRQ 146


>gi|323135569|ref|ZP_08070652.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylocystis sp. ATCC 49242]
 gi|322398660|gb|EFY01179.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylocystis sp. ATCC 49242]
          Length = 454

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 10/80 (12%)

Query: 92  GGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W    P      L  G     V +L+ RL   G        +  +D    + V  FQ 
Sbjct: 373 GRWLAPAPPDDGPALEPGAGGPDVAQLQRRLADFGY---KMVETGVYDEDTAATVAAFQ- 428

Query: 148 RHGLDP--SGMVDSSTLEAM 165
           RH       G  D+STL+ +
Sbjct: 429 RHFRPARVDGRADASTLDIL 448


>gi|307129489|ref|YP_003881505.1| Protein ybiS [Dickeya dadantii 3937]
 gi|306527018|gb|ADM96948.1| Protein ybiS precursor [Dickeya dadantii 3937]
          Length = 365

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 42/162 (25%), Gaps = 42/162 (25%)

Query: 189 QKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++N     L     G K  +   + +G++ + TPI   + + R    P W  
Sbjct: 92  PDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGQLGKDTPINWVTSVQRKKERPTWT- 150

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                            +Y                                     G  N
Sbjct: 151 ----------PTAAMHAEYAARGEF------------------------LPQVYPAGPDN 176

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            M    +   +      H T     F   +R  + GCVR+R+
Sbjct: 177 PMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLRD 213


>gi|168051500|ref|XP_001778192.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670405|gb|EDQ56974.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 529

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPS 154
           E+ +R +  G     V+ L+E L   G     + +    F    E+AVK +Q   G+   
Sbjct: 298 EVMLREMRKGAEGDEVKELQEALQELGFYSGEEDIEYSMFADGTETAVKTWQASIGVRED 357

Query: 155 GMVDSSTLEAM 165
           G++    L  +
Sbjct: 358 GVLSPELLAML 368


>gi|17228635|ref|NP_485183.1| hypothetical protein all1140 [Nostoc sp. PCC 7120]
 gi|17130486|dbj|BAB73097.1| all1140 [Nostoc sp. PCC 7120]
          Length = 313

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 20/36 (55%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   + A  E+A+K FQ ++GL   G++   + + +
Sbjct: 276 VDGIYGAQTEAAIKRFQRQNGLLADGIIGPMSWQRL 311



 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +P  P    N   S+ RL++   RL I+G  + S   +   +   + A++ FQ   GL+
Sbjct: 174 PVPSVPDEEQNIDTSILRLQKSLNRLKITGRSNKSLVENSQLNTETKFAIERFQGIVGLE 233

Query: 153 PSGMVDSSTLEAMNVPVDLRI 173
            +G+V+ +T  A+N+ +  RI
Sbjct: 234 KTGIVNEATWNAINLILAKRI 254


>gi|88860965|ref|ZP_01135601.1| hypothetical protein PTD2_10463 [Pseudoalteromonas tunicata D2]
 gi|88817178|gb|EAR26997.1| hypothetical protein PTD2_10463 [Pseudoalteromonas tunicata D2]
          Length = 490

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 7/66 (10%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM------NVPVDL 171
           L   G ++  +     +     +A+K FQ   GL  +G VD +T +A+      N  V  
Sbjct: 302 LNCLGYINDQEAAG-KYTPNTVAAIKRFQQESGLTVNGKVDEATNKALADTGCMNNSVQN 360

Query: 172 RIRQLQ 177
            I  + 
Sbjct: 361 GISMIA 366


>gi|257055214|ref|YP_003133046.1| metalloendopeptidase-like membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256585086|gb|ACU96219.1| metalloendopeptidase-like membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 323

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 4/72 (5%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP+L I  L  G     V+ L+  L           +   F     SAV+ FQ  + L  
Sbjct: 254 WPKL-IYELRQGARGNHVRALQTALNKR---SAGILVDGDFGPATNSAVRTFQSVNRLVV 309

Query: 154 SGMVDSSTLEAM 165
            G+    T  A+
Sbjct: 310 DGLAGPYTWRAL 321



 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 23/99 (23%)

Query: 92  GGWPELPIRPLHLGNSSVSVQ-RLRER---LIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           GGW  L   P   G  +  +Q  L +R   L + G L P             +AVK FQ 
Sbjct: 192 GGWSYLD--PDARGQRARVIQFLLNQRGHNLEVDGWLGPVST----------AAVKSFQR 239

Query: 148 RHGLDPSGMVDSST----LEAMNVPVD---LRIRQLQVN 179
            +GL   G V ++T    +  +        +R  Q  +N
Sbjct: 240 SNGLVVDGQVGAATWPKLIYELRQGARGNHVRALQTALN 278


>gi|322805741|emb|CBZ03306.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum H04402
           065]
          Length = 281

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           SR G+   P      G      + +++ LI  G    S G    F      AVK FQ   
Sbjct: 203 SRQGFNTFPA--CRQGARGNITKIIQQMLINIGYTVGSFGADGVFGNSTVMAVKSFQRDC 260

Query: 150 GLDPSGMVDSSTLEAM 165
            L    +V   T +A+
Sbjct: 261 NLSADVLVGKETWKAL 276


>gi|261417931|ref|YP_003251613.1| spore cortex-lytic enzyme [Geobacillus sp. Y412MC61]
 gi|297529599|ref|YP_003670874.1| spore cortex-lytic enzyme [Geobacillus sp. C56-T3]
 gi|319767257|ref|YP_004132758.1| spore cortex-lytic enzyme [Geobacillus sp. Y412MC52]
 gi|261374388|gb|ACX77131.1| spore cortex-lytic enzyme [Geobacillus sp. Y412MC61]
 gi|297252851|gb|ADI26297.1| spore cortex-lytic enzyme [Geobacillus sp. C56-T3]
 gi|317112123|gb|ADU94615.1| spore cortex-lytic enzyme [Geobacillus sp. Y412MC52]
          Length = 267

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL   G  +    +   F      A++ FQ  +GL   G
Sbjct: 25  AFSPQVIQRGAVGDDVIELQARLQYLGFYNG--KIDGVFGWRTYWALRNFQYEYGLPVDG 82

Query: 156 MVDSSTLEAM 165
           +  S T   +
Sbjct: 83  LAGSETKRKL 92


>gi|126654267|ref|ZP_01726053.1| hypothetical protein BB14905_17570 [Bacillus sp. B14905]
 gi|126589278|gb|EAZ83437.1| hypothetical protein BB14905_17570 [Bacillus sp. B14905]
          Length = 504

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G  S SV+   E L + G       +   FD     AV+  Q  + L+ +G++  +T
Sbjct: 409 MKAGMQSDSVKAAEEMLQVLGYEPGE--IDGLFDDNTAHAVEQLQAANNLEETGVLTGNT 466

Query: 162 LEAM 165
             A+
Sbjct: 467 TYAL 470


>gi|56965746|ref|YP_177480.1| hypothetical protein ABC3988 [Bacillus clausii KSM-K16]
 gi|56911992|dbj|BAD66519.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 432

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 19/47 (40%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           P+ G+   +       V+ FQ R GL   G+    TL  +   +  R
Sbjct: 33  PNYGVDGHYGPETTDWVQRFQERKGLQVDGVAGPETLRRLRADIVQR 79



 Score = 41.0 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
              +S   V+ L+E L+          +   +       V+ FQ  + L   G+   +TL
Sbjct: 79  RPDSSGNGVEILQEDLLF--FYIQQSTVDGNYGPGTTQGVRDFQFLNNLVVDGIAGPNTL 136

Query: 163 EAM 165
           + M
Sbjct: 137 KKM 139



 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+R++ +L      D S  +  +F    +SAV+ FQ        G+    T+  
Sbjct: 151 GDTGSLVRRIQHQLNEQDRADISIEVDGSFGPATKSAVEAFQEATEQRVDGIAGPVTMNL 210

Query: 165 M 165
           +
Sbjct: 211 L 211


>gi|303233179|ref|ZP_07319852.1| peptidoglycan binding domain protein [Atopobium vaginae PB189-T1-4]
 gi|302480764|gb|EFL43851.1| peptidoglycan binding domain protein [Atopobium vaginae PB189-T1-4]
          Length = 301

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           ++P+  G S  +V+ ++ RL   G  +DP +  S  + +    AV  F++   L+ S  V
Sbjct: 1   MKPIQKGASGSAVEDIQNRLSRLGYVIDPQELQSQTYGSSTARAVASFRLAQQLELSEDV 60

Query: 158 DSSTLEAM 165
           D  T  A+
Sbjct: 61  DQETWNAL 68



 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 21/144 (14%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ--------DILSR 91
           I +       +   N L+R+   ID    + S+   + T +A+A ++        + + +
Sbjct: 4   IQKGASGSAVEDIQNRLSRLGYVID-PQELQSQTYGSSTARAVASFRLAQQLELSEDVDQ 62

Query: 92  GGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             W  L      LG+              V +L+  L I G           + A+ E+A
Sbjct: 63  ETWNALVDESYVLGDRTLYLRLPNFHGHDVYQLQTILNILGF--SCGDADSYYGAHTEAA 120

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           VK FQ   G    GM    T +A+
Sbjct: 121 VKEFQESQGGLADGMAFQDTFDAL 144


>gi|92115924|ref|YP_575653.1| hypothetical protein Nham_0297 [Nitrobacter hamburgensis X14]
 gi|91798818|gb|ABE61193.1| hypothetical protein Nham_0297 [Nitrobacter hamburgensis X14]
          Length = 1123

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 95  PELPIRP-LHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P +   P L LG      +  LR RL +   +     L    D YV SA++L+Q  HGL 
Sbjct: 80  PAVGEGPVLTLGAGFDSRIPGLRTRLSVPSWVGQHDAL--VLDEYVSSALELYQWAHGLP 137

Query: 153 PSGMVDSSTLEAMNVPV 169
            +G +D+ T+  ++  V
Sbjct: 138 ETGTLDAVTVGTLDRNV 154


>gi|50119764|ref|YP_048931.1| hypothetical protein ECA0821 [Pectobacterium atrosepticum SCRI1043]
 gi|49610290|emb|CAG73734.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
          Length = 365

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 55/205 (26%), Gaps = 49/205 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++N     L     G K  +   + +G + + TPI   + + R    P W  
Sbjct: 94  PDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTSVQRKKAGPTWT- 152

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                        +   +Y                                     G  N
Sbjct: 153 ----------PTAKMHAEYAAR------------------------GETLQKVFPAGPDN 178

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            M    +   +      H T     F   +R  + GCVR+    D+  +L    P  +R 
Sbjct: 179 PMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRL-RADDI-KYLFNSVPVGTRV 231

Query: 367 HI-----EEVVKTRKTTPVKLATEV 386
                  +  V+   +  V++   +
Sbjct: 232 QFINEPVKATVEPDGSRYVEVHNPL 256


>gi|220932691|ref|YP_002509599.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H
           168]
 gi|219994001|gb|ACL70604.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H
           168]
          Length = 225

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V++++  L   G       +          AV+ +Q   GL   G+V  +T E +
Sbjct: 2   MRGDDVEQVQTFLNQQGY---DVTVDGILGPETAGAVRDYQEDKGLSVDGVVGPNTREEI 58


>gi|320180157|gb|EFW55096.1| General secretion pathway protein A [Shigella boydii ATCC 9905]
          Length = 266

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L+  L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 169 WKMSPEGESTITRDSSEEEILWLKTMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 226

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 227 KTDGVVGFSTLVHL 240


>gi|296102869|ref|YP_003613015.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057328|gb|ADF62066.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 321

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 42/164 (25%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWV 245
                  +++N+    L     GK       + +G++  D  TP + + ++    NP W 
Sbjct: 97  PDAPREGIVINLAELRLYYYPPGKNEVSVYPIGIGQLGGDTLTPTMITTVSDKRANPTWT 156

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P + I+                        K + + +  V                G  
Sbjct: 157 -PTANIR---------------------ARYKAQGIDLPAVV-------------PAGPD 181

Query: 306 NAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
           N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 182 NPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|289976573|gb|ADD21635.1| matrix metalloprotease 1 [Nicotiana benthamiana]
          Length = 364

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 32/63 (50%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           H G     + ++++     G +      +  FD  +ESA+K +Q    L+ +G++D+ T+
Sbjct: 50  HAGQKVDGLAKIKKYFYNFGYISSLSNFTDDFDDALESALKTYQQNFNLNTTGVLDAPTI 109

Query: 163 EAM 165
           E +
Sbjct: 110 EHL 112


>gi|196249379|ref|ZP_03148077.1| carboxyl-terminal protease [Geobacillus sp. G11MC16]
 gi|196211136|gb|EDY05897.1| carboxyl-terminal protease [Geobacillus sp. G11MC16]
          Length = 481

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +P     +   +   ++ L   G  DP +     F    E+AVK FQ  + L  +G +D 
Sbjct: 392 KPFTYDMNDEQIANAQKMLKGLGF-DPGRTDG-YFSKETETAVKAFQKANKLPATGRIDE 449

Query: 160 STLEAMNVPVDLRIR 174
           +T   +   +   IR
Sbjct: 450 TTANVLQTKIMEAIR 464


>gi|138896677|ref|YP_001127130.1| putative protease [Geobacillus thermodenitrificans NG80-2]
 gi|134268190|gb|ABO68385.1| Putative protease [Geobacillus thermodenitrificans NG80-2]
          Length = 472

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +P     +   +   ++ L   G  DP +     F    E+AVK FQ  + L  +G +D 
Sbjct: 383 KPFTYDMNDEQIANAQKMLKGLGF-DPGRTDG-YFSKETETAVKAFQKANKLPATGRIDE 440

Query: 160 STLEAMNVPVDLRIR 174
           +T   +   +   IR
Sbjct: 441 TTANVLQTKIMEAIR 455


>gi|89071145|ref|ZP_01158340.1| hypothetical protein OG2516_12809 [Oceanicola granulosus HTCC2516]
 gi|89043302|gb|EAR49526.1| hypothetical protein OG2516_12809 [Oceanicola granulosus HTCC2516]
          Length = 327

 Score = 45.6 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 55/176 (31%), Gaps = 46/176 (26%)

Query: 189 QKMGLRYVLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           Q+  +  + ++ P + L A +  G V +   V VG     +P     +  +   P     
Sbjct: 188 QEGEVARIEIDKPNSRLVAYDGSGAVLVNYPVAVGSDQTPSPSGTHEVVAVAVEPT---- 243

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                            YL D N    D                          PG    
Sbjct: 244 ---------------YSYLPDTNFQQGDNDE------------------PLTLPPGPNGP 270

Query: 308 MASTKIEFYSRNNTY-MHDTPEP-ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           +    I+      TY +H TP+P  LFN     ++ GCVR+ N   L++  L    
Sbjct: 271 VGLVWIDLSKP--TYGLHGTPDPASLFN----AQSHGCVRMTNWDALELAHLTGQG 320


>gi|262190080|ref|ZP_06048374.1| VgrG protein [Vibrio cholerae CT 5369-93]
 gi|262034045|gb|EEY52491.1| VgrG protein [Vibrio cholerae CT 5369-93]
          Length = 432

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 82  IDVASLPTMMPSSANNTANDEPVAEEKTSERILKSDLLKPSDELEKLAKRQASAYRQ--- 138

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F +  ++A++ FQ  + 
Sbjct: 139 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQ 184

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V   TL A+
Sbjct: 185 PSHQSHPSYSIG-PVDGIVGKGTLLAL 210


>gi|157146185|ref|YP_001453504.1| hypothetical protein CKO_01941 [Citrobacter koseri ATCC BAA-895]
 gi|157083390|gb|ABV13068.1| hypothetical protein CKO_01941 [Citrobacter koseri ATCC BAA-895]
          Length = 322

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 43/170 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L     GK       + +G++  D  TP + + ++   
Sbjct: 93  LQTLLP-DAPREGIVINLAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 151

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W    +I                                 + +D  +  P      
Sbjct: 152 ANPTWTPTANI-----------------RARYK----------AQGIDLPAVVP------ 178

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              G  N M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 179 --AGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 223


>gi|109897279|ref|YP_660534.1| peptidoglycan binding domain-containing protein [Pseudoalteromonas
           atlantica T6c]
 gi|109699560|gb|ABG39480.1| Peptidoglycan-binding domain 1 [Pseudoalteromonas atlantica T6c]
          Length = 199

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           ++RLI    L+     S  FD     A K FQ   GL  +G+ D +TL  MN
Sbjct: 145 KQRLIKMDYLN--ALGSDDFDQETLDAFKHFQRDRGLAQTGVPDQNTL--MN 192


>gi|255558368|ref|XP_002520211.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
 gi|223540703|gb|EEF42266.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
          Length = 364

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G+    + +L+      G +  +    +  FD  +ESA+K +Q    L+ +G +D  T
Sbjct: 54  RAGDKLEGLSKLKNYFHYFGYIPNTLSNFTDDFDDALESAIKTYQQNFNLNVTGELDEQT 113

Query: 162 LEAMNVPVDLRIRQL 176
           L+ +  P       +
Sbjct: 114 LDQLVRPRCGNADII 128


>gi|160878697|ref|YP_001557665.1| peptidoglycan binding domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|160427363|gb|ABX40926.1| Peptidoglycan-binding domain 1 protein [Clostridium phytofermentans
           ISDg]
          Length = 464

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLD 152
             P   L +G+S  SV +L+E+L    D+    P+      F     +AVK FQ +  L 
Sbjct: 378 SFPGYNLTIGSSGSSVMQLQEQLNAIADVYYPIPNVSADGIFGPATAAAVKAFQKQFNLP 437

Query: 153 PSGMVDSSTLE 163
            SG+VD  T  
Sbjct: 438 QSGIVDLPTWY 448


>gi|56420766|ref|YP_148084.1| sporulation specific N-acetylmuramoyl-L-alanine amidase
           [Geobacillus kaustophilus HTA426]
 gi|56380608|dbj|BAD76516.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Geobacillus kaustophilus HTA426]
          Length = 264

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL   G  +    +   F      A++ FQ  +GL   G
Sbjct: 25  AFSPQVIQRGAVGDDVIELQARLQYLGFYNG--KIDGVFGWRTYWALRNFQYEYGLPVDG 82

Query: 156 MVDSSTLEAM 165
           +  S T   +
Sbjct: 83  LAGSETKRKL 92


>gi|86138723|ref|ZP_01057296.1| hypothetical protein MED193_22786 [Roseobacter sp. MED193]
 gi|85824783|gb|EAQ44985.1| hypothetical protein MED193_22786 [Roseobacter sp. MED193]
          Length = 222

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           +A++ FQ   GL   G+V   T  A+  P   
Sbjct: 20  NAIRRFQQSVGLLADGIVGPMTYAALFGPPAT 51


>gi|226314511|ref|YP_002774407.1| hypothetical protein BBR47_49260 [Brevibacillus brevis NBRC 100599]
 gi|226097461|dbj|BAH45903.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 237

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P    R L  G+    VQ ++ RL  +G           F +   +A+K FQ    L 
Sbjct: 163 GDPSHDPRDLAEGDVGGDVQLIQSRLKSAGYYHG--ICDGKFRSSTTAALKKFQRDRKLK 220

Query: 153 PSGMVDSSTLEAM 165
           P+G+V S   + +
Sbjct: 221 PNGVVSSKIYQEL 233


>gi|225571095|ref|ZP_03780112.1| hypothetical protein CLOHYLEM_07195 [Clostridium hylemonae DSM
           15053]
 gi|225160176|gb|EEG72795.1| hypothetical protein CLOHYLEM_07195 [Clostridium hylemonae DSM
           15053]
          Length = 262

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             L+ERL   G       +        ++A+K +Q  HGL   G+V   T   +
Sbjct: 207 ALLQERLNALGY--NCGVVDGINGTKTQAAIKAYQRAHGLVADGIVGVKTWSNL 258


>gi|330861295|emb|CBX71539.1| hypothetical protein YEW_CU11380 [Yersinia enterocolitica W22703]
          Length = 315

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 39/121 (32%), Gaps = 25/121 (20%)

Query: 7   INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSD 66
            +  LY    Y +     +++ +      + E     Y + +  +               
Sbjct: 152 GSVWLYSNVPYKMAMPPATILNR--WQQAVHEGTTAPYLASLAPQ--------------- 194

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLD 125
                     +  +A+   + +  R  WP++   P L  G  S  +  LRE L  +G L 
Sbjct: 195 -----HPQYEKMHQALK--EMLADRRPWPQMANGPSLRPGQLSDDIPALREILDRTGMLH 247

Query: 126 P 126
           P
Sbjct: 248 P 248


>gi|308174085|ref|YP_003920790.1| spore cortex-lytic enzyme [Bacillus amyloliquefaciens DSM 7]
 gi|307606949|emb|CBI43320.1| spore cortex-lytic enzyme [Bacillus amyloliquefaciens DSM 7]
 gi|328552788|gb|AEB23280.1| spore cortex-lytic enzyme [Bacillus amyloliquefaciens TA208]
 gi|328912414|gb|AEB64010.1| spore cortex-lytic enzyme [Bacillus amyloliquefaciens LL3]
          Length = 289

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVDSS 160
           +  G +   V  L+ RL  +G  +    +   +      AV+ FQ + G+    G+V + 
Sbjct: 34  IQRGATGDDVIELQARLQYNGFYNG--KIDGVYGWTTYWAVRNFQEKFGMKAVDGLVGAK 91

Query: 161 TLEAM 165
           T + +
Sbjct: 92  TKQVL 96


>gi|290962481|ref|YP_003493663.1| serine-threonine protein kinase [Streptomyces scabiei 87.22]
 gi|260652007|emb|CBG75139.1| putative serine-threonine protein kinase [Streptomyces scabiei
           87.22]
          Length = 621

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVDSST 161
             G+S   V++++  L   G      G+S  FDA  ++AV+ FQ    L    G V    
Sbjct: 554 RPGDSGDRVRQVQCMLSKRGYSLGPGGVSGEFDAGTKAAVQSFQRARQLVVKDGTVRPRV 613

Query: 162 LEAM 165
             A+
Sbjct: 614 WRAL 617


>gi|227502232|ref|ZP_03932281.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium accolens ATCC
           49725]
 gi|227077056|gb|EEI15019.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium accolens ATCC
           49725]
          Length = 382

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 12/68 (17%)

Query: 110 SVQRLRERLIISGDLDPSKG------------LSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            V   R  L   G L    G                FDA +   +K FQ   G+ P+G +
Sbjct: 2   RVAEARATLARLGLLSDFTGELSAWKKQKYSETDKTFDADLAEVLKAFQQSRGILPTGEI 61

Query: 158 DSSTLEAM 165
           D  TL  +
Sbjct: 62  DDLTLREL 69



 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 5/80 (6%)

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
            G       +   F     +A+  +Q   GL   G+   +T+ A+++           N+
Sbjct: 104 LGFY--QDRVDGHFGRTTHAALTEYQHNCGLQEDGVCGPATIRALSLLGRRITGGSAHNI 161

Query: 181 ---MRIKKLLEQKMGLRYVL 197
               R++    +  G R V+
Sbjct: 162 VERERVRNAGPKLAGKRVVI 181


>gi|209525406|ref|ZP_03273946.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328]
 gi|209494086|gb|EDZ94401.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328]
          Length = 208

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 39/154 (25%), Gaps = 52/154 (33%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +             V VG+   +TP    ++   + NP W                Q+P
Sbjct: 92  RVYVYRGESQIASYPVAVGKPGWETPTGTFQVTEKVENPQW----------------QNP 135

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--TKIEFYSRNNT 321
                           EV                     G  +A+           ++  
Sbjct: 136 -------------WTGEVRP------------------AGPNSALGLRWIGFWHDGKDAI 164

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
             H TP            + GCVR+RN   + ++
Sbjct: 165 GFHGTPTVNSIGQ---AASHGCVRMRNEDIVALF 195


>gi|160879346|ref|YP_001558314.1| peptidoglycan binding domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|160428012|gb|ABX41575.1| Peptidoglycan-binding domain 1 protein [Clostridium phytofermentans
           ISDg]
          Length = 667

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 98  PIRPLHLGN----SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P R L   +    S + V+ L++RL   G       +   +    E+ +K FQ  + L  
Sbjct: 588 PFRELKYKDGTVMSGIDVKNLQQRLNRLGY---KVTVDGTYGKNTETVIKKFQKDNKLKE 644

Query: 154 SGMVDSSTLEAM 165
           +G+V+ ST E +
Sbjct: 645 TGVVNYSTWEKL 656


>gi|262278335|ref|ZP_06056120.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258686|gb|EEY77419.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 416

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 84/251 (33%), Gaps = 60/251 (23%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL  +G +   T +A+ V    +   ++  +       +  +   Y   +
Sbjct: 168 KAISSFQQMNGLSATGELTKETWDAL-VAKQTKPAFIEYTI------SDADLKGPYAQ-S 219

Query: 200 IP-AASLEAVENGKVGLRSTVIVG----------RVDRQTPILHSRINRIMFNPYWVIPR 248
           IP   +L+A   G    R + ++G          +    T        +I+      +P 
Sbjct: 220 IPSDYALQAKMKGLYYTRISEMLGEKFHIDEAFLKKINPTATFKKAGEKII------VPN 273

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEV-------------------- 286
             ++ D+   +     +     +++ + + + +  F   +                    
Sbjct: 274 --VRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPAGTYKVVGVARN 331

Query: 287 DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            W S  P NF            PG    + +  I   S+ +  +H TP P L +      
Sbjct: 332 PWYSYSPSNFVQGKNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSLISKTA--- 387

Query: 340 TSGCVRVRNII 350
           + GC+R+ N  
Sbjct: 388 SHGCIRLTNWD 398


>gi|160876018|ref|YP_001555334.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS195]
 gi|160861540|gb|ABX50074.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS195]
          Length = 273

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V+ L++RL  +G    S  +   F    + A++ FQ +  L  +G     
Sbjct: 2   TLKKGSNGSQVRDLQQRLNAAG---ASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVR 58

Query: 161 TLEAM 165
           TL  +
Sbjct: 59  TLALL 63


>gi|227326330|ref|ZP_03830354.1| hypothetical protein PcarcW_03064 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 355

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 56/205 (27%), Gaps = 49/205 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++N     L     G K  +   + +G + + TPI   + + R    P W  
Sbjct: 92  PDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTSVQRKKAGPTWT- 150

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                        +   +Y                                     G  N
Sbjct: 151 ----------PTAKMHAEYAAR------------------------GETLQKVFPAGPDN 176

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            M    +   +      H T     F   +R  + GCVR+    D+  +L  + P  +R 
Sbjct: 177 PMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRL-RADDI-KYLFNNVPVGTRV 229

Query: 367 HI-----EEVVKTRKTTPVKLATEV 386
                  +  V+   +  V++   +
Sbjct: 230 QFINEPVKATVEPDGSRYVEVHNPL 254


>gi|227495720|ref|ZP_03926031.1| phage integrase [Actinomyces urogenitalis DSM 15434]
 gi|226834740|gb|EEH67123.1| phage integrase [Actinomyces urogenitalis DSM 15434]
          Length = 448

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 21/40 (52%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +      FD     AV  +Q+RHGL+ SG VD  T EA+
Sbjct: 308 ATARRGPVFDRETVDAVASWQLRHGLEASGRVDRPTWEAL 347


>gi|323143884|ref|ZP_08078548.1| protein ErfK/srfK [Succinatimonas hippei YIT 12066]
 gi|322416356|gb|EFY07026.1| protein ErfK/srfK [Succinatimonas hippei YIT 12066]
          Length = 301

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 55/197 (27%), Gaps = 49/197 (24%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQKD 254
           +++N     L    +  V     + +G++   TP+   + + R    P W          
Sbjct: 94  IIINSAEMRLYYYHDN-VVDILPIGIGQLGTDTPLNWVTAVQRKKAGPTWT--------- 143

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                +   +Y                                     G  N M    + 
Sbjct: 144 --PTAKMHAEYRARGEY------------------------LPAVWPAGPDNPMGLYALY 177

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH-----IE 369
                    H T     F   +R  + GCVR+RN  +   +L  + P  +R       I+
Sbjct: 178 IGRLYAI--HGTNAD--FGIGLR-VSHGCVRLRN--EDIEYLFNNVPVGTRVQFINRPIK 230

Query: 370 EVVKTRKTTPVKLATEV 386
             ++      +++   +
Sbjct: 231 YAIEDNGNIYIEVHQPL 247


>gi|302544645|ref|ZP_07296987.1| lipoprotein [Streptomyces hygroscopicus ATCC 53653]
 gi|302462263|gb|EFL25356.1| lipoprotein [Streptomyces himastatinicus ATCC 53653]
          Length = 211

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 20/134 (14%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   V+ L+ RL   G  D +   +  F     ++V  +Q   GL  +G VDS T  +
Sbjct: 9   GTSGERVRELQARLRRLGHFDRNP--TGYFGTVTRASVTSYQRARGLSATGSVDSRTWTS 66

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQK----------MGLRYVLVNIPAASLEAVENGKVG 214
           +      R         R +                +  R + ++  + +L  + NG+V 
Sbjct: 67  L-RSRTARPT-------RDELYPPTTNPLAKPDSRCLTGRVLCISKSSRTLAWMINGRVV 118

Query: 215 LRSTVIVGRVDRQT 228
               V  G     T
Sbjct: 119 SAMDVRFGSQYTPT 132


>gi|158422481|ref|YP_001523773.1| putative chitinase [Azorhizobium caulinodans ORS 571]
 gi|158329370|dbj|BAF86855.1| putative chitinase [Azorhizobium caulinodans ORS 571]
          Length = 301

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 94  WPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W ++    L     +  +   L+E L   G      G          +A++ FQ R+GL 
Sbjct: 219 WSQIGTGALWRAAGADDATADLQESLNALGYSLTVDGRQG---PATTAAIRDFQSRNGLK 275

Query: 153 PSGMVDSST 161
             G+    T
Sbjct: 276 ADGIAGPVT 284


>gi|284033902|ref|YP_003383833.1| peptidoglycan-binding domain 1 protein [Kribbella flavida DSM
           17836]
 gi|283813195|gb|ADB35034.1| Peptidoglycan-binding domain 1 protein [Kribbella flavida DSM
           17836]
          Length = 206

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 2/64 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+   +++ L+  L           +   + +   + V   Q RH L   G+    T 
Sbjct: 126 RFGDPDTAIRTLQRNLNYC--YGSKLTIDGVYGSNTRAIVMQVQKRHKLAADGIYGPQTR 183

Query: 163 EAMN 166
             MN
Sbjct: 184 STMN 187


>gi|291563072|emb|CBL41888.1| Putative peptidoglycan-binding domain-containing protein
           [butyrate-producing bacterium SS3/4]
          Length = 412

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPS 154
           P   L +G +   V++L+E+L  IS   +    +S    +      AV+ FQ   GL  +
Sbjct: 328 PGYDLKIGATGDKVRQLQEQLDAISSVYNAIPDISPDGIYGPATAEAVRKFQSIFGLPQT 387

Query: 155 GMVDSSTLE 163
           G+VD +T  
Sbjct: 388 GVVDFATWY 396


>gi|328957708|ref|YP_004375094.1| N-acetylmuramoyl-L-alanine amidase [Carnobacterium sp. 17-4]
 gi|328674032|gb|AEB30078.1| N-acetylmuramoyl-L-alanine amidase [Carnobacterium sp. 17-4]
          Length = 367

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 6/74 (8%)

Query: 92  GGWPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKLFQM 147
           G W          L  G S   V  ++  LI  G+     G     +      AVK FQ+
Sbjct: 290 GYWGPESASKMRILKTGFSGSDVYVVQAFLI--GNYHLKLGTPDKQYGPKTTEAVKQFQL 347

Query: 148 RHGLDPSGMVDSST 161
             GL   G+    T
Sbjct: 348 NSGLLADGITGPKT 361


>gi|291484719|dbj|BAI85794.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. natto BEST195]
          Length = 305

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           +  G +   V  L+ RL  +G  +    +   +      AV+ FQ + GL    G+V + 
Sbjct: 35  IQRGATGDDVVELQARLQYNGYYNG--KIDGVYGWGTYWAVRNFQDQFGLKEVDGLVGAK 92

Query: 161 TLEAM 165
           T + +
Sbjct: 93  TKQTL 97


>gi|291299343|ref|YP_003510621.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568563|gb|ADD41528.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 379

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+S   V R++  L  +  L         F    + AV  +Q   G++ +G+V++ T
Sbjct: 314 LKEGSSGADVSRVQRALTAA--LGAEVSQDGQFGPKTKQAVTDYQTAAGVEANGVVNAET 371

Query: 162 LEAM 165
            +A+
Sbjct: 372 WKAL 375



 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+   + L+           S +FD    +A K FQ + GL+ SG VD  T
Sbjct: 243 LATGSKGSEVRA-AQCLLADAGFPTGDKPSGSFDDKTVTATKEFQTKVGLEASGKVDKHT 301

Query: 162 LEAM 165
             A+
Sbjct: 302 WTAL 305


>gi|229543982|ref|ZP_04433041.1| spore cortex-lytic enzyme [Bacillus coagulans 36D1]
 gi|229325121|gb|EEN90797.1| spore cortex-lytic enzyme [Bacillus coagulans 36D1]
          Length = 264

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G     V  L+ RL   G    +      +  Y   A++ FQ  +G+   G+     
Sbjct: 36  IQKGAVGDDVIELQARLQYIGYYKGTIDGVFGYSTY--WALRNFQKAYGMPVDGLAGPGV 93

Query: 162 LEAM 165
              +
Sbjct: 94  KAKL 97


>gi|16079350|ref|NP_390174.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310211|ref|ZP_03592058.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221314534|ref|ZP_03596339.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319456|ref|ZP_03600750.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323732|ref|ZP_03605026.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|1730903|sp|P50739|SLEB_BACSU RecName: Full=Spore cortex-lytic enzyme; Short=SCLE; Flags:
           Precursor
 gi|1146210|gb|AAC83957.1| spore cortex lytic enzyme [Bacillus subtilis subsp. subtilis str.
           168]
 gi|1688023|dbj|BAA11473.1| spore-cortex-lytic enzyme prepeptide [Bacillus subtilis]
 gi|2634711|emb|CAB14209.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 305

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           +  G +   V  L+ RL  +G  +    +   +      AV+ FQ + GL    G+V + 
Sbjct: 35  IQRGATGDDVVELQARLQYNGYYNG--KIDGVYGWGTYWAVRNFQDQFGLKEVDGLVGAK 92

Query: 161 TLEAM 165
           T + +
Sbjct: 93  TKQTL 97


>gi|116626900|ref|YP_829056.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116230062|gb|ABJ88771.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 182

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 48/167 (28%), Gaps = 65/167 (38%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           +     R ++V+IP   L  +E+ +V       VG     +P     I   + +P W   
Sbjct: 30  QNTRPARRIVVSIPDRKLAVMEDDRVLRVFETAVGAPKSPSPTGTYTIINSIADPTWY-- 87

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                                        KGK V                    PGK N 
Sbjct: 88  ----------------------------TKGKIV-------------------PPGKCNP 100

Query: 308 MA------STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +       S K           H T  P    ++ R  + GC+R+RN
Sbjct: 101 LGTRWLGLSVK-----GYGI--HGTNVPS---SIGRNASHGCIRMRN 137


>gi|321311765|ref|YP_004204052.1| spore cortex-lytic enzyme [Bacillus subtilis BSn5]
 gi|320018039|gb|ADV93025.1| spore cortex-lytic enzyme [Bacillus subtilis BSn5]
          Length = 305

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           +  G +   V  L+ RL  +G  +    +   +      AV+ FQ + GL    G+V + 
Sbjct: 35  IQRGATGDDVVELQARLQYNGYYNG--KIDGVYGWGTYWAVRNFQDQFGLKEVDGLVGAK 92

Query: 161 TLEAM 165
           T + +
Sbjct: 93  TKQTL 97


>gi|225427844|ref|XP_002276155.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 295

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESA 141
           ++ + S G +  L       G+ +  +Q +++ L   G L     S+  S  FD  +ES+
Sbjct: 34  FRHLESFGSFKHLEGS--KKGDKTEGIQMVKKYLEHYGYLSSTHYSQMDSDDFDDTLESS 91

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           +K FQ  + L P+G +D+ T   M+ P
Sbjct: 92  LKAFQTFYHLKPTGSLDAPTATLMSKP 118


>gi|304313391|ref|YP_003812989.1| hypothetical protein HDN1F_37840 [gamma proteobacterium HdN1]
 gi|301799124|emb|CBL47367.1| conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 368

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 48/187 (25%)

Query: 196 VLVNIPAASLEAV---ENGK--VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +++NI    L        GK    +   V + R +  TP+  +++  +  +P W +P+SI
Sbjct: 101 IVLNISQRRLFYFPAPAKGKAAKVVTFPVSIARENWATPLGTTKVTGLFKDPAWFVPKSI 160

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            ++   A   + P Y                                    PG  N M  
Sbjct: 161 QEEHKAAGEVEFPTYF----------------------------------PPGPNNPMGM 186

Query: 311 TKIE--FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
             I+  F      ++H T  P      +R  + GC+ +    D      +         I
Sbjct: 187 LAIQLGFP---GIFIHGTNRPW--GVGMRT-SHGCLHL-YPEDAANIFPQLKAGVPVRVI 239

Query: 369 EEVVKTR 375
           +E V   
Sbjct: 240 DEPVVAG 246


>gi|229522795|ref|ZP_04412209.1| VgrG protein [Vibrio cholerae TM 11079-80]
 gi|229340012|gb|EEO05020.1| VgrG protein [Vibrio cholerae TM 11079-80]
          Length = 1050

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  +I  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 671 IDVASLPTMIPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F +  ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V   TL A+
Sbjct: 774 PSHQTHPSYSIG-AVDGIVGKGTLLAL 799


>gi|147776035|emb|CAN65266.1| hypothetical protein VITISV_040133 [Vitis vinifera]
          Length = 295

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESA 141
           ++ + S G +  L       G+ +  +Q +++ L   G L     S+  S  FD  +ES+
Sbjct: 34  FRHLESFGSFKHLEGS--KKGDKTEGIQMVKKYLEHYGYLSSTHYSQMDSDDFDDTLESS 91

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           +K FQ  + L P+G +D+ T   M+ P
Sbjct: 92  LKAFQTFYHLKPTGSLDAPTATLMSKP 118


>gi|114564416|ref|YP_751930.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella frigidimarina NCIMB
           400]
 gi|114335709|gb|ABI73091.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella frigidimarina NCIMB
           400]
          Length = 305

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 48/155 (30%), Gaps = 42/155 (27%)

Query: 196 VLVNIPAASLEAVENGKVGLRS-TVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           V++N     L     GK  +    + +G++ + TP    + + R   NP W  P   I+K
Sbjct: 99  VVINSAEMRLYYYPKGKNTVEVLPIGIGQIGKDTPENWVTTVQRKRANPTWT-PTVNIRK 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
              A     P                        W              G  N M    +
Sbjct: 158 SYAAKGITLPAV----------------------W------------PAGADNPMGLFAL 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +      H T     F   +R  +SGCVR+R+
Sbjct: 184 YVGNLYAV--HGTNAT--FGIGLR-VSSGCVRLRD 213


>gi|306834789|ref|ZP_07467853.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium accolens ATCC
           49726]
 gi|304569317|gb|EFM44818.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium accolens ATCC
           49726]
          Length = 382

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 12/68 (17%)

Query: 110 SVQRLRERLIISGDLDPSKG------------LSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            V   R  L   G L    G                FDA +   +K FQ   G+ P+G +
Sbjct: 2   RVAEARATLARLGLLSDFTGELSAWKKQKYSETDKTFDADLADVLKAFQQSRGILPTGEI 61

Query: 158 DSSTLEAM 165
           D  TL  +
Sbjct: 62  DDLTLREL 69



 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 5/80 (6%)

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
            G       +   F     +A+  +Q   GL   G+   +T+ A+++           N+
Sbjct: 104 LGFY--QDRVDGHFGRTTHAALTEYQHNCGLQEDGVCGPATIRALSLLGRRITGGSAHNI 161

Query: 181 ---MRIKKLLEQKMGLRYVL 197
               R++    +  G R V+
Sbjct: 162 VERERVRNAGPKLAGKRVVI 181


>gi|302553721|ref|ZP_07306063.1| lipoprotein [Streptomyces viridochromogenes DSM 40736]
 gi|302471339|gb|EFL34432.1| lipoprotein [Streptomyces viridochromogenes DSM 40736]
          Length = 283

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P R L   G++   V+ L+ RL     L    G +  +D   E AV  FQ + GL  +G 
Sbjct: 73  PARVLWSRGDTGRDVRELQARLRQVAWL--FDGPTGTYDDRTERAVSGFQGKRGLPRTGR 130

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL----EQKMGL------RYVLVNIPAASLE 206
             + T+         R+R +     R    L                R + ++  + +L 
Sbjct: 131 --TDTVTW------QRLRGMTREPGRWDLYLMGGQPADPPDARCMTGRVLCIDKTSRTLR 182

Query: 207 AVENGKVGLRSTVIVGRVDRQT 228
            + +G+      V  G     T
Sbjct: 183 WMIDGRTVSTVAVRFGSQYTPT 204


>gi|158321448|ref|YP_001513955.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus oremlandii OhILAs]
 gi|158141647|gb|ABW19959.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus oremlandii OhILAs]
          Length = 254

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ ++ G+    V  ++ RL   G  D  + L   +  ++E A+  FQ  H +  +  ++
Sbjct: 183 LQTIYPGDFGADVLEIQNRLRAYGYYD-VEHLDGKYGPHMEQALYQFQKDHNIPKNPHIE 241

Query: 159 SSTLEAMNV 167
             T +A+ V
Sbjct: 242 YDTYKALGV 250


>gi|17231042|ref|NP_487590.1| hypothetical protein all3550 [Nostoc sp. PCC 7120]
 gi|17132683|dbj|BAB75249.1| all3550 [Nostoc sp. PCC 7120]
          Length = 208

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 3/79 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           L  G+    VQ L+ +L   G           +    + AV  FQ         G+ D +
Sbjct: 52  LKPGSQGPDVQTLQTQLKQLGYYSGIADG--KYGDSTKKAVAKFQQAKVFSRVDGVADLA 109

Query: 161 TLEAMNVPVDLRIRQLQVN 179
           T   +   +     +L V 
Sbjct: 110 TKRILQTALIDNQNKLAVA 128


>gi|86143221|ref|ZP_01061623.1| putative phage-related protein [Leeuwenhoekiella blandensis MED217]
 gi|85830126|gb|EAQ48586.1| putative phage-related protein [Leeuwenhoekiella blandensis MED217]
          Length = 273

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ L   +    V  L E L   G       +S  F     +AVK FQ ++ L   G+V 
Sbjct: 1   MKTLRYRSRGQEVYFLEELLQKLGY---EVYVSTYFGLDTNNAVKDFQQKNNLVVDGIVG 57

Query: 159 SSTLEAM 165
             T   +
Sbjct: 58  LKTWSKL 64


>gi|296332967|ref|ZP_06875424.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674929|ref|YP_003866601.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149818|gb|EFG90710.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413173|gb|ADM38292.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 303

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           +  G +   V  L+ RL  +G  +    +   +      AV+ FQ + GL    G+V + 
Sbjct: 35  IQRGATGDDVVELQARLQYNGYYNG--KIDGVYGWGTYWAVRNFQDQFGLKEVDGLVGAK 92

Query: 161 TLEAM 165
           T + +
Sbjct: 93  TKQTL 97


>gi|307153544|ref|YP_003888928.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7822]
 gi|306983772|gb|ADN15653.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7822]
          Length = 216

 Score = 45.2 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 40/156 (25%), Gaps = 56/156 (35%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR--SIIQKDMMALLRQ 261
            +   +  +      V VG+   +TP    ++ +++ NP W  P   SII          
Sbjct: 100 RVYIYQGDQQVAMYPVAVGKKGWETPTGDFQVLQMVPNPIWQNPWNGSII---------- 149

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS--TKIEFYSRN 319
                                                    G  N +           +N
Sbjct: 150 ---------------------------------------PAGPRNPLGERWIGFWTDGKN 170

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
               H T    L        + GCVR+RN     ++
Sbjct: 171 YIGFHGTQAEHLMGQ---AVSHGCVRMRNSDIKAIF 203


>gi|330465557|ref|YP_004403300.1| peptidoglycan-binding domain 1 protein [Verrucosispora maris
           AB-18-032]
 gi|328808528|gb|AEB42700.1| peptidoglycan-binding domain 1 protein [Verrucosispora maris
           AB-18-032]
          Length = 359

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 13/117 (11%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP------ELPI-R 100
           V+        R      +       +T A   +  A Y    +  G P      ++P  R
Sbjct: 65  VDGELGYGPNRTAASRLAGTITALPDTSATVRRGKALY----AVDGDPVTLLYGKVPAYR 120

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            L  G     V++L   L   G       +   +      AV+ +Q   G+  +G V
Sbjct: 121 TLQPGVEGPDVEQLERNLKALGY--TGFTVDDEYTWATADAVRAWQDDLGVPETGRV 175


>gi|318079927|ref|ZP_07987259.1| hypothetical protein SSA3_25371 [Streptomyces sp. SA3_actF]
          Length = 93

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-G 155
           +    L  G+S   V +L ERL   G           FD  +E A+  +Q+  G     G
Sbjct: 18  VTQAVLRRGDSGPEVAKLEERLRAVGIYPGRDDG--RFDRGLEYALMTYQVTRGASDEHG 75

Query: 156 MVDSSTLEAM 165
           +  + T   +
Sbjct: 76  VYGADTRTKL 85


>gi|328880515|emb|CCA53754.1| hypothetical protein SVEN_0467 [Streptomyces venezuelae ATCC 10712]
          Length = 363

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 8/137 (5%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
             P  A+V+   +       V+   D    R           ++        +  A Y+ 
Sbjct: 45  APPATATVVRTDLV--RAKTVDGTLDFAQRRPVKSAVVGTVTVAATEGRTVTRGQALYE- 101

Query: 88  ILSRG---GWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           +  +     +  +P+ R +  G+    V +L   L   G       +   +D   E+AVK
Sbjct: 102 LDDKPVTLLYGPVPVFREMKTGDRGSDVLQLERNLRDLGH-GAGLYVDTRYDKDTETAVK 160

Query: 144 LFQMRHGLDPSGMVDSS 160
            +Q     +P+G V   
Sbjct: 161 RWQKSLNREPTGRVGKG 177


>gi|297804958|ref|XP_002870363.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316199|gb|EFH46622.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            L +G+    VQ L+E L+  G     + +   +F +   SAVK +Q   G+   G++ +
Sbjct: 184 TLKVGSEGDDVQALQEALLKLGFYSGEEDMEFSSFSSGTASAVKTWQASLGVREDGIMTA 243

Query: 160 STLEAM 165
             L+ +
Sbjct: 244 ELLQRL 249


>gi|320104360|ref|YP_004179951.1| hypothetical protein Isop_2836 [Isosphaera pallida ATCC 43644]
 gi|319751642|gb|ADV63402.1| protein of unknown function DUF1028 [Isosphaera pallida ATCC 43644]
          Length = 391

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 23/92 (25%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSV-----------AFDAYVESAVKLFQMRHGLD--- 152
               V +L+  L   GD  P +  +             +D     AV  F+ R GL    
Sbjct: 266 QGPDVVQLKRALHELGDYRPDEQEADFNRGLRSSEGGVYDRETAQAVDRFRARVGLPHPG 325

Query: 153 -----PSGMVDSSTLEAMNVPVDLRIRQLQVN 179
                  G+VD   + A+       I QL+  
Sbjct: 326 LGLGYAPGVVDREMIRAL----QDAITQLRRA 353


>gi|269796632|ref|YP_003316087.1| peptidoglycan binding protein [Sanguibacter keddieii DSM 10542]
 gi|269098817|gb|ACZ23253.1| putative peptidoglycan binding protein [Sanguibacter keddieii DSM
           10542]
          Length = 384

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           R +  G S   V+ LR+ L  +G  + + G   ++   +  A+  +Q  +G    G+
Sbjct: 130 REIGPGTSGADVEGLRDYLAAAGS-ETTLGRGASYSPSLRRAITAYQRANGFPADGV 185


>gi|29135080|ref|NP_803710.1| endolysin [Pseudomonas phage phiKZ]
 gi|18996609|gb|AAL83045.1|AF399011_144 PHIKZ144 [Pseudomonas phage phiKZ]
          Length = 260

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ L  G+    V +L+  L + G  D  K   +  +      VK FQ  + LD  G+V 
Sbjct: 1   MKVLRKGDRGDEVCQLQTLLNLCGY-DVGKPDGIFGNNTFNQVVK-FQKDNCLDSDGIVG 58

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 59  KNTWAEL 65


>gi|319782836|ref|YP_004142312.1| N-acetylmuramoyl-L-alanine amidase family 2 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168724|gb|ADV12262.1| N-acetylmuramoyl-L-alanine amidase family 2 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 252

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDS 159
            L  G++   ++ L+  L + G       +S  FD   E+ V+ FQ         G+ D 
Sbjct: 181 TLTTGDTGGDIEALQSMLALYGY---GVEISGVFDRQTEAVVEAFQRHFRPRKVDGVADG 237

Query: 160 STLEAM 165
           STL  +
Sbjct: 238 STLRTL 243


>gi|298244048|ref|ZP_06967855.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
 gi|297557102|gb|EFH90966.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
          Length = 368

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP+L I+    G+   +V  L+ +L  +G       +   F +  E AV+ +Q +  L  
Sbjct: 100 WPKL-IKATSSGSQGYTVMALQHQLNQAGF---HLNVDGVFGSDTEKAVRAYQQQVSLSV 155

Query: 154 SGMVDSSTLEAMNVPVDLRIRQ 175
            G+    T + +      R ++
Sbjct: 156 DGVAGVRTWQYLLAATAAREKK 177


>gi|319645240|ref|ZP_07999473.1| SleB protein [Bacillus sp. BT1B_CT2]
 gi|317393049|gb|EFV73843.1| SleB protein [Bacillus sp. BT1B_CT2]
          Length = 305

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G  +    +   +      AV+ FQ + GL    
Sbjct: 15  AFSEQVIQRGATGDDVIELQARLQYNGYYNG--RIDGVYGWATYWAVRNFQNQFGLRDTD 72

Query: 155 GMVDSSTLEAM 165
           G+V   T   +
Sbjct: 73  GLVGPKTKRLL 83


>gi|302772727|ref|XP_002969781.1| hypothetical protein SELMODRAFT_13930 [Selaginella moellendorffii]
 gi|302823297|ref|XP_002993302.1| hypothetical protein SELMODRAFT_3042 [Selaginella moellendorffii]
 gi|300138875|gb|EFJ05627.1| hypothetical protein SELMODRAFT_3042 [Selaginella moellendorffii]
 gi|300162292|gb|EFJ28905.1| hypothetical protein SELMODRAFT_13930 [Selaginella moellendorffii]
          Length = 301

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           + +L+  L   G     +  +  FD   E+A+KL+Q   GL+ +G +D  T+  M
Sbjct: 22  LPQLKRYLQEFGY-TSWEEFTPDFDNQTEAAIKLYQSNFGLNATGTLDERTITQM 75


>gi|326202028|ref|ZP_08191898.1| Peptidoglycan-binding domain 1 protein [Clostridium papyrosolvens
           DSM 2782]
 gi|325987823|gb|EGD48649.1| Peptidoglycan-binding domain 1 protein [Clostridium papyrosolvens
           DSM 2782]
          Length = 330

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDL-----DPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P     +G+    V+ ++  L+ +G           G+   F    ++AV  +Q+ +GL 
Sbjct: 90  PNGCYGIGSRGEKVEDIQTALVNNGYSVGNSGPNYDGIDKTFGVDTKAAVVRYQIDNGLS 149

Query: 153 PSGMVDSSTLEAMNVPVD 170
             G+V  +T +++ V ++
Sbjct: 150 YDGIVGKNTAKSLGVNLE 167


>gi|257784149|ref|YP_003179366.1| Peptidoglycan-binding domain 1 protein [Atopobium parvulum DSM
           20469]
 gi|257472656|gb|ACV50775.1| Peptidoglycan-binding domain 1 protein [Atopobium parvulum DSM
           20469]
          Length = 309

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           P+  G+   +V+ ++ERL+  G  ++  +  +  FD     AV  F++ H L     VD+
Sbjct: 3   PITPGSIGAAVEDIQERLVKLGYTIEDDERQNHVFDKSTARAVARFRLDHDLSLGEEVDA 62

Query: 160 STLEAM 165
           ST   M
Sbjct: 63  STWAIM 68



 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 20/108 (18%)

Query: 76  AQTEKAIAFYQ--------DILSRGGWPELPIRPLHLGNS----------SVSVQRLRER 117
             T +A+A ++        + +    W  +      LG+              V++L+ER
Sbjct: 39  KSTARAVARFRLDHDLSLGEEVDASTWAIMVDEGYELGDRTLYLRLPNFHGNDVRQLQER 98

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L I G       +   +  + E+AVKLFQ   G    GM    TL+A+
Sbjct: 99  LNILGF--SCGKVDGHYGVHTEAAVKLFQESVGELADGMAFQDTLDAI 144


>gi|119386314|ref|YP_917369.1| peptidoglycan binding domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119376909|gb|ABL71673.1| Peptidoglycan-binding domain 1 protein [Paracoccus denitrificans
           PD1222]
          Length = 264

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 14/61 (22%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +    + +R  L+++G                   V+ FQ   GL   G+    TL A
Sbjct: 173 GMADRQARYVRAALVLAGYGATE--------------VRRFQKEAGLTADGIAGPKTLAA 218

Query: 165 M 165
           +
Sbjct: 219 L 219


>gi|302534571|ref|ZP_07286913.1| membrane protein [Streptomyces sp. C]
 gi|302443466|gb|EFL15282.1| membrane protein [Streptomyces sp. C]
          Length = 471

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 20/71 (28%), Gaps = 4/71 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISG---DLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPS 154
           +R    G S  +V  L  RL   G         GL     D     A +  Q   G    
Sbjct: 399 LRVFRPGQSHPAVLALGRRLAQKGFGKYYTSGPGLRWSEADRRNVEAFQRAQGWRGGSAD 458

Query: 155 GMVDSSTLEAM 165
           G     T   +
Sbjct: 459 GYPGPETWRRL 469


>gi|168187152|ref|ZP_02621787.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
           C str. Eklund]
 gi|169294969|gb|EDS77102.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
           C str. Eklund]
          Length = 304

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V++L+  L   G    +      F    ++AV  FQ  + L   G+V
Sbjct: 168 SSGLLKIGSKEDKVKQLQVNLNKLGYTCGNADG--IFGQGTKNAVISFQRNNELSADGIV 225

Query: 158 DSSTLEAMNVPVDLR 172
             ST   +   ++ R
Sbjct: 226 GESTWNKILSNLEDR 240


>gi|293400844|ref|ZP_06644989.1| LysM domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305870|gb|EFE47114.1| LysM domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 226

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             Y       G+P      L  G+  V V  L++ L   G    ++ L  AF +   +A+
Sbjct: 135 KRYGTPACSAGYPT-----LRQGSRGVYVLILQDALNALGY--STQTLDGAFGSNTRAAL 187

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
             +Q  +GL   G+    T   +
Sbjct: 188 IAYQRNNGLTADGISGCGTWTRL 210


>gi|327485350|gb|AEA79756.1| VgrG-3 protein [Vibrio cholerae LMA3894-4]
          Length = 839

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 671 IDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F +  ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V   TL A+
Sbjct: 774 PSHQTHPSYSIG-PVDGIVGKGTLLAL 799


>gi|255588477|ref|XP_002534615.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
 gi|223524902|gb|EEF27766.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
          Length = 325

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 28/59 (47%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    +  L++ L   G L  +   +  FD   ESA+  +Q   GL  +G +D+ T+ 
Sbjct: 28  GSEVTGMSELKKYLNRFGYLPGNVNFTDIFDLEFESAILAYQNNLGLPVTGKLDADTIS 86


>gi|119386487|ref|YP_917542.1| peptidoglycan binding domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119377082|gb|ABL71846.1| Peptidoglycan-binding domain 1 protein [Paracoccus denitrificans
           PD1222]
          Length = 264

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           V+ FQ   GL   G+    TL A+
Sbjct: 196 VRRFQKEAGLTADGIAGPKTLAAL 219


>gi|310825721|ref|YP_003958078.1| putative muramoyl-pentapeptide carboxypeptidase [Eubacterium
           limosum KIST612]
 gi|308737455|gb|ADO35115.1| putative muramoyl-pentapeptide carboxypeptidase [Eubacterium
           limosum KIST612]
          Length = 173

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 4/57 (7%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFD-AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S+  ++  L   G    + G     D    ++AVK FQ + G+   G+    T   +
Sbjct: 2   SILEVQRILSHLGY---NPGEHDGLDGPNTQAAVKAFQRKAGIKADGIAGPVTRGHL 55


>gi|297840561|ref|XP_002888162.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334003|gb|EFH64421.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 351

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 1/81 (1%)

Query: 89  LSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
            ++  W     +   H+G +   + +L++     G +  +   +  FD  ++SA+  +Q 
Sbjct: 26  ATQNAWETFSKLAGCHIGENINGLSKLKQYFRRFGYITGTNNCTDDFDDVLQSAINTYQK 85

Query: 148 RHGLDPSGMVDSSTLEAMNVP 168
              L  +G +DSSTL  +  P
Sbjct: 86  NFNLKVTGKLDSSTLRQIVKP 106


>gi|284028974|ref|YP_003378905.1| ErfK/YbiS/YcfS/YnhG family protein [Kribbella flavida DSM 17836]
 gi|283808267|gb|ADB30106.1| ErfK/YbiS/YcfS/YnhG family protein [Kribbella flavida DSM 17836]
          Length = 281

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 10/130 (7%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +S  V+++  RLI    LD  + L  +F     SAVK FQ   G+   G VD +T + 
Sbjct: 76  GATSPDVRKVEARLIQLKLLDK-RWLDASFGTSTRSAVKKFQTSKGIPALGYVDQNTWDQ 134

Query: 165 M-NVPVDLRIRQL-----QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           +     +    +L      VN    + L  +      + ++  +  L  V +G V ++  
Sbjct: 135 LKAATREPTQTELFPPPPVVN---GRPLDPRCATGVSLCIDKTSRKLRYVVDGAVKMQFD 191

Query: 219 VIVGRVDRQT 228
           V  G     T
Sbjct: 192 VRFGAQKTAT 201


>gi|154246422|ref|YP_001417380.1| peptidoglycan binding domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154160507|gb|ABS67723.1| Peptidoglycan-binding domain 1 protein [Xanthobacter autotrophicus
           Py2]
          Length = 497

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 11/84 (13%)

Query: 95  PELPIRPL--HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH--- 149
           P  P + L    G+  VSV RL++RL   G    +   +  FD   + AV+LFQ R    
Sbjct: 233 PRFPGKYLMEKTGDK-VSVTRLQKRLADMGASPGAP--TGVFDTPTKYAVQLFQARSVDL 289

Query: 150 -G--LDPSGMVDSSTLEAMNVPVD 170
            G  L+  G+V   T  A+  P+ 
Sbjct: 290 DGAPLEIDGIVGPMTWGALFGPLS 313


>gi|164519578|pdb|3BKH|A Chain A, Crystal Structure Of The Bacteriophage Phikz Lytic
           Transglycosylase, Gp144
 gi|164519579|pdb|3BKV|A Chain A, X-Ray Structure Of The Bacteriophage Phikz Lytic
           Transglycosylase, Gp144, In Complex With Chitotetraose,
           (Nag)4
          Length = 268

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+    V +L+  L + G  D  K   +  +      VK FQ  + LD  G+V  
Sbjct: 10  KVLRKGDRGDEVCQLQTLLNLCGY-DVGKPDGIFGNNTFNQVVK-FQKDNCLDSDGIVGK 67

Query: 160 STLEAM 165
           +T   +
Sbjct: 68  NTWAEL 73


>gi|84498128|ref|ZP_00996925.1| hypothetical protein JNB_18613 [Janibacter sp. HTCC2649]
 gi|84381628|gb|EAP97511.1| hypothetical protein JNB_18613 [Janibacter sp. HTCC2649]
          Length = 611

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 16/125 (12%)

Query: 49  NDRFDNFLARVDMGIDSDIPI-ISKETIAQTEKAIAFYQDILSRGGWPELPI-------R 100
           + +F            S   + ++K+    T   +   + I SR G    P         
Sbjct: 255 DGQFGPGTEAAVASFQSRNGVAVTKQLDNATWTKLVQLKLIPSRTGGTTAPSPLSAYVNT 314

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  G+   +V  L++ L ++ D         +F    E+ VK +Q   G+ P+G+V SS
Sbjct: 315 VIQRGSKGPAVIALQKALGLTAD--------GSFGPGTETKVKAYQSSKGISPTGVVASS 366

Query: 161 TLEAM 165
           T +A+
Sbjct: 367 TWKAL 371



 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 8/64 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+   +V  L++ L I+ D         +F    E+ VK +Q   G+ P+G+V S+T
Sbjct: 397 IQRGSKGPAVIALQKALRITAD--------GSFGPGTETKVKAYQTSKGISPTGVVASAT 448

Query: 162 LEAM 165
             A+
Sbjct: 449 WAAL 452



 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 7/64 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+ L+  L           +  AF      AVK  Q R GL  SG+V+  T
Sbjct: 481 LSAGSKGTAVKVLQAGLGGL-------AVDGAFGQATVGAVKALQTRWGLPASGVVNLKT 533

Query: 162 LEAM 165
              +
Sbjct: 534 WNRL 537


>gi|225452584|ref|XP_002275582.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296087730|emb|CBI34986.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVA-------FDAYVESAVKLFQMRHGLDPSG 155
             G+    + ++R  L   G L  +   + +       FD  +ESA++ FQ  + L P+G
Sbjct: 43  KKGDKVEGIHKVRNYLQRFGYLSSTHSKTESQVDGDDHFDDDLESAIQAFQTYYHLKPTG 102

Query: 156 MVDSSTLEAMNVP 168
           ++D+ T   M+ P
Sbjct: 103 ILDAPTAALMSRP 115


>gi|154245840|ref|YP_001416798.1| N-acetylmuramoyl-L-alanine amidase [Xanthobacter autotrophicus Py2]
 gi|154159925|gb|ABS67141.1| N-acetylmuramoyl-L-alanine amidase family 2 [Xanthobacter
           autotrophicus Py2]
          Length = 265

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 4/63 (6%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTL 162
           LG++   V  L+  L + G       L+ A+DA     V  FQ         G+ D++T+
Sbjct: 191 LGDAGEPVAALKAMLALYGY---GIELTDAYDAETADVVAAFQRHFRPAKVDGVADAATI 247

Query: 163 EAM 165
             +
Sbjct: 248 LTL 250


>gi|229824435|ref|ZP_04450504.1| hypothetical protein GCWU000282_01758 [Catonella morbi ATCC 51271]
 gi|229786036|gb|EEP22150.1| hypothetical protein GCWU000282_01758 [Catonella morbi ATCC 51271]
          Length = 459

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           E  +G  YV V+I    +   ++GK  L + V+ GR    T
Sbjct: 329 ENDIGPSYVEVDIAHQMMFIYKDGKKVLETPVVTGRPGTTT 369


>gi|146300718|ref|YP_001195309.1| peptidoglycan binding domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146155136|gb|ABQ05990.1| Peptidoglycan-binding domain 1 protein [Flavobacterium johnsoniae
           UW101]
          Length = 274

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R + LG  S  V  L E L+  G    S  +S +F    + +V+ FQ+++ L   G+V 
Sbjct: 1   MRTIKLGVKSNEVYYLNELLVKLGY---SIVVSDSFGTATDKSVRDFQLKNNLVVDGVVG 57

Query: 159 SSTLEAM 165
             T   +
Sbjct: 58  LKTWTVL 64


>gi|328884149|emb|CCA57388.1| hypothetical protein SVEN_4102 [Streptomyces venezuelae ATCC 10712]
          Length = 122

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                F    + A++ FQ   GL P G+V  +T  A+
Sbjct: 68  AEDRIFGPDTDGAIRAFQQWKGLRPDGIVGPATGTAL 104


>gi|326491397|dbj|BAJ94176.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 373

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 8/69 (11%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLS--------VAFDAYVESAVKLFQMRHGLDPSGM 156
           G     +  L+  L   G +    G           AFD ++E+AVK +Q R  L  +G 
Sbjct: 57  GTRVTGLGDLKRYLATFGYMPKPAGAGAEHGGGPMDAFDEHLEAAVKRYQSRLSLPVTGR 116

Query: 157 VDSSTLEAM 165
           +D  TL+ M
Sbjct: 117 LDVVTLDQM 125


>gi|312871420|ref|ZP_07731515.1| peptidase, S41 family [Lactobacillus iners LEAF 3008A-a]
 gi|312872352|ref|ZP_07732422.1| peptidase, S41 family [Lactobacillus iners LEAF 2062A-h1]
 gi|311092175|gb|EFQ50549.1| peptidase, S41 family [Lactobacillus iners LEAF 2062A-h1]
 gi|311093073|gb|EFQ51422.1| peptidase, S41 family [Lactobacillus iners LEAF 3008A-a]
          Length = 460

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  S  L+  +D    ++VK+F+  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYL--SNNLTGVYDNATLNSVKMFEKDNNLKVTGIVNKDI 433

Query: 162 LEAM 165
             A+
Sbjct: 434 RYAL 437


>gi|21223243|ref|NP_629022.1| lipoprotein [Streptomyces coelicolor A3(2)]
 gi|11544753|emb|CAC17656.1| putative lipoprotein [Streptomyces coelicolor A3(2)]
          Length = 281

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 42/147 (28%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G++   V+ L+ RL     L    G +  +D   E AV  FQ + GL  +G   + T+
Sbjct: 77  KRGDTGRDVRELQARLRQVEWL--VDGPTGTYDDLTERAVSGFQGKRGLPRTGR--TDTV 132

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMG--LRYVLVNIPAA----------------- 203
                              R+   +  + G    Y++   PAA                 
Sbjct: 133 TW----------------QRLLG-MSHEPGKWDLYLMGGQPAAAPDPRCTSGRVLCVSKS 175

Query: 204 --SLEAVENGKVGLRSTVIVGRVDRQT 228
             +L  + +G+     +V  G     T
Sbjct: 176 SRTLRWMIDGRTVSTMSVRFGSQYTPT 202


>gi|223982820|ref|ZP_03633044.1| hypothetical protein HOLDEFILI_00318 [Holdemania filiformis DSM
           12042]
 gi|223965219|gb|EEF69507.1| hypothetical protein HOLDEFILI_00318 [Holdemania filiformis DSM
           12042]
          Length = 543

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 20/150 (13%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
           G   V++P     + +  N  + S  N+ + N +      I    P++   T +   +  
Sbjct: 393 GSVQVQRPFADGSVLKYTNSRWLSP-NEEWINGVGITPDQIVELPPVLQTTTASFMMEED 451

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             Y                  L   S  V   ++ L       P+      FDA    A+
Sbjct: 452 ESY-----------------TLDQVSEHVASAQKALAFLDY--PAGRSDGYFDASTAQAL 492

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           + +Q  H L+ SG++D++TL+++   V  R
Sbjct: 493 RWYQSEHNLEASGVLDAATLQSLVSGVRYR 522


>gi|256825620|ref|YP_003149580.1| peptidoglycan-binding domain-containing protein [Kytococcus
           sedentarius DSM 20547]
 gi|256689013|gb|ACV06815.1| putative peptidoglycan-binding domain-containing protein
           [Kytococcus sedentarius DSM 20547]
          Length = 279

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 17/127 (13%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           ++  R L  G+ +  V   + ++  +G    +      + A  E AV   Q  +GL   G
Sbjct: 40  QVQRRTLRKGDRNDDVLYFQRKIRSAGFWAGTPDG--VYGAQTEQAVWAVQKAYGLRRDG 97

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +V +ST                +  +R  ++  +    RY+ +++    L  V +G+V  
Sbjct: 98  VVGNSTW---------------LAAIRQPRIPVKTTKGRYIEIDLDRQLLFYVVDGQVKQ 142

Query: 216 RSTVIVG 222
                 G
Sbjct: 143 VHNTSTG 149


>gi|220932697|ref|YP_002509605.1| YD repeat protein [Halothermothrix orenii H 168]
 gi|219994007|gb|ACL70610.1| YD repeat protein [Halothermothrix orenii H 168]
          Length = 2277

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 94   WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            W  + ++          V++++  L   G       +          AV+ +Q   GL  
Sbjct: 2167 WRNI-MKEQQPMMRGDDVEQVQTFLNQQGY---DVTVDGILGPETAGAVRDYQEDKGLSV 2222

Query: 154  SGMVDSSTLEAM 165
             G+V  +T E +
Sbjct: 2223 DGVVGPNTREEI 2234


>gi|291483804|dbj|BAI84879.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 297

 Score = 44.8 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 4/61 (6%)

Query: 107 SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           S   V +++  L            + G+   +      AV  FQ  +GL   G+   +T 
Sbjct: 230 SGEHVFQVQRALAALYFYPDKGAVNNGIDGVYGPKTADAVARFQSVNGLTADGIYGPATK 289

Query: 163 E 163
            
Sbjct: 290 A 290


>gi|326390405|ref|ZP_08211963.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993523|gb|EGD51957.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 417

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               R L+ G     V+ L+  L  +G    +  +   F     + V  FQ    L P G
Sbjct: 33  TFGSRLLYSGTYGTDVEELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDG 90

Query: 156 MVDSSTLEAM 165
           +V   T  A+
Sbjct: 91  IVGPKTYAAL 100


>gi|313897890|ref|ZP_07831431.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
 gi|312957425|gb|EFR39052.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
          Length = 226

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 7/80 (8%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             Y       G+P      L  G+  V V  L++ L   G    ++ L   F     +A+
Sbjct: 135 KRYGTPACSAGFPV-----LRSGSRGVYVLILQDALNALGY--STQTLDGVFGGNTRNAL 187

Query: 143 KLFQMRHGLDPSGMVDSSTL 162
             +Q  +GL   G+V   T 
Sbjct: 188 VAYQRDNGLSADGVVGCGTW 207


>gi|312621812|ref|YP_004023425.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202279|gb|ADQ45606.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 223

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++ V V  ++ RL   G    S  +   + + +E AV ++Q ++ L  +  +  
Sbjct: 154 RTIYPGDTGVDVMAVQRRLKELGFYSGS--IDGKYGSALEYAVNIYQKKNKLPVTNKITP 211

Query: 160 STLEAM 165
             L  M
Sbjct: 212 YLLRKM 217


>gi|288556278|ref|YP_003428213.1| sporulation protein-like protein [Bacillus pseudofirmus OF4]
 gi|288547438|gb|ADC51321.1| sporulation protein-like protein [Bacillus pseudofirmus OF4]
          Length = 187

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSS 160
           L +G+   +V+ L+  L    D+     +   +      AV  FQ R   L   G+    
Sbjct: 120 LKVGSRGEAVKTLQRGLK---DMSYHVAVDGVYGPQTRDAVIKFQERFPSLANDGIFGPR 176

Query: 161 TLEAM 165
           T E M
Sbjct: 177 TKEVM 181



 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM-RHGLDPSGMV 157
              L  G+   +V+ ++  L    ++         F    ++AV  FQ  +  L   G+ 
Sbjct: 41  SGTLKEGSRGENVKIMQRALNR--EMGAELTEDGIFGPNTKTAVLAFQKTKSELKNDGIY 98

Query: 158 DSSTLEAM 165
             +T +A+
Sbjct: 99  GPATHKAL 106


>gi|257868295|ref|ZP_05647948.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus casseliflavus
           EC30]
 gi|257874432|ref|ZP_05654085.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus casseliflavus
           EC10]
 gi|257802409|gb|EEV31281.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus casseliflavus
           EC30]
 gi|257808596|gb|EEV37418.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus casseliflavus
           EC10]
          Length = 465

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 20/39 (51%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            G  Y+ V++    +   ++G++ L + +I G+    TP
Sbjct: 344 FGNTYIEVDLKNQHMWYYKDGQLVLETAIISGKPATPTP 382


>gi|289769547|ref|ZP_06528925.1| lipoprotein [Streptomyces lividans TK24]
 gi|289699746|gb|EFD67175.1| lipoprotein [Streptomyces lividans TK24]
          Length = 282

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 42/147 (28%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G++   V+ L+ RL     L    G +  +D   E AV  FQ + GL  +G   + T+
Sbjct: 78  KRGDTGRDVRELQARLRQVEWL--VDGPTGTYDDLTERAVSGFQGKRGLPRTGR--TDTV 133

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMG--LRYVLVNIPAA----------------- 203
                              R+   +  + G    Y++   PAA                 
Sbjct: 134 TW----------------QRLLG-MSHEPGKWDLYLMGGQPAAAPDPRCTSGRVLCVSKS 176

Query: 204 --SLEAVENGKVGLRSTVIVGRVDRQT 228
             +L  + +G+     +V  G     T
Sbjct: 177 SRTLRWMIDGRTVSTMSVRFGSQYTPT 203


>gi|242035087|ref|XP_002464938.1| hypothetical protein SORBIDRAFT_01g029150 [Sorghum bicolor]
 gi|241918792|gb|EER91936.1| hypothetical protein SORBIDRAFT_01g029150 [Sorghum bicolor]
          Length = 371

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 7/67 (10%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD-------PSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
             G+    +  L+  L   G +          +  + AFDA++E+AV+ +Q +  L  +G
Sbjct: 57  RRGSHVAGLAELKRYLARFGYMPMPGAAAAAEREPTDAFDAHMEAAVRRYQSKLSLPVTG 116

Query: 156 MVDSSTL 162
            +D++TL
Sbjct: 117 QLDATTL 123


>gi|163791469|ref|ZP_02185877.1| endolysin [Carnobacterium sp. AT7]
 gi|159873282|gb|EDP67378.1| endolysin [Carnobacterium sp. AT7]
          Length = 367

 Score = 44.8 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +R L  G++   V  ++  L +  +          F      AVK FQ+  GL   G+V 
Sbjct: 300 MRTLKSGSTGWDVYAIQAFL-LGNNFQIVGMPDNTFGPNTVRAVKEFQIVSGLQSDGIVG 358

Query: 159 SSTLEAMNV 167
             T + + V
Sbjct: 359 PKTCQKLVV 367


>gi|322831069|ref|YP_004211096.1| Peptidoglycan-binding domain 1 protein [Rahnella sp. Y9602]
 gi|321166270|gb|ADW71969.1| Peptidoglycan-binding domain 1 protein [Rahnella sp. Y9602]
          Length = 510

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 17/87 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQR------LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           +P+ P     + N+S           L + L +        G +  +D  +   VKLFQ 
Sbjct: 423 FPQTPSGKNAINNTSPEADTAWLDMTLSKILNL------PFGKTGQWDKDLIRKVKLFQQ 476

Query: 148 RHGLDPSGMVDSSTLEAM-----NVPV 169
           R GL   G V   TL  +     N+PV
Sbjct: 477 REGLIVDGRVGKGTLMQIAKRTGNMPV 503


>gi|302391221|ref|YP_003827041.1| cell wall hydrolase SleB [Acetohalobium arabaticum DSM 5501]
 gi|302203298|gb|ADL11976.1| cell wall hydrolase SleB [Acetohalobium arabaticum DSM 5501]
          Length = 234

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G+  V V  L+ +L + G  +    +   F      AV+ FQ ++ L  +G+VD
Sbjct: 41  ARDLKYGDEGVDVVFLQVQLKVLGFYEGE--IDGLFGRGTLEAVEKFQNKNDLKVNGIVD 98

Query: 159 SSTLEAM 165
            +  + +
Sbjct: 99  KNVYKYL 105


>gi|291409995|ref|XP_002721290.1| PREDICTED: matrix metalloproteinase 21 [Oryctolagus cuniculus]
          Length = 574

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           A +  AV+ FQ  + L  SG +D++TL AMN P
Sbjct: 82  AALAEAVRRFQQVNALPASGELDAATLAAMNRP 114


>gi|225570400|ref|ZP_03779425.1| hypothetical protein CLOHYLEM_06500 [Clostridium hylemonae DSM
           15053]
 gi|225160771|gb|EEG73390.1| hypothetical protein CLOHYLEM_06500 [Clostridium hylemonae DSM
           15053]
          Length = 421

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G S   V +++E+L +I+G     P       +    E+AV+ FQ   GL  +
Sbjct: 337 PGYNLEIGASGDKVLQMQEQLNVIAGAYPAIPKITADGVYGPATEAAVRKFQSVFGLPET 396

Query: 155 GMVDSSTLE 163
           G+VD  T  
Sbjct: 397 GIVDYRTWY 405


>gi|228907493|ref|ZP_04071350.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus
           thuringiensis IBL 200]
 gi|228851985|gb|EEM96782.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus
           thuringiensis IBL 200]
          Length = 335

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGM 156
           P +P+  G+   +++ ++  L +S        +   F    E  VK +Q     L   G+
Sbjct: 274 PGKPIKQGDRGRNIEAIQRTLKVS--------VDGIFGKETEEKVKEYQRNSSFLSIDGV 325

Query: 157 VDSSTLEAM 165
           V   T  A+
Sbjct: 326 VGMQTWYAL 334


>gi|71898434|ref|ZP_00680606.1| Histidinol-phosphate aminotransferase [Xylella fastidiosa Ann-1]
 gi|71731747|gb|EAO33806.1| Histidinol-phosphate aminotransferase [Xylella fastidiosa Ann-1]
          Length = 365

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 73/204 (35%), Gaps = 29/204 (14%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
           FL      + + IP+   ETI QT    A      + G + ++P     L      +  L
Sbjct: 157 FLCSPSNPVGAAIPLQQIETILQTLAGTALVVVDEAYGEFSDVPSVVPLL-ARYPHLVVL 215

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQM------------RHGLDPSGMVDSSTL 162
           R  L  +  L   +  SV  DA++ + ++  Q               GL           
Sbjct: 216 RT-LSKAHALAAVRIGSVIADAHLVAVLRRCQAPYPLPTPCVSLAEQGLSA--------- 265

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR----ST 218
            A+ +    R+ +++    R++  L    G+R V  +     L   ++ +   +    + 
Sbjct: 266 AALQITAQ-RVAEIRAERERLRAALACLSGVRRVYPSQGNFLLVRFDDAEAAFQALYAAG 324

Query: 219 VIVGRVDRQTPILHSRINRIMFNP 242
           V+V R  R  P LH  +   +  P
Sbjct: 325 VVV-RDQRAAPQLHDALRLTVGTP 347


>gi|256751507|ref|ZP_05492384.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256749591|gb|EEU62618.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 422

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               R L+ G     V+ L+  L  +G    +  +   F     + V  FQ    L P G
Sbjct: 38  TFGSRLLYSGTYGTDVEELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDG 95

Query: 156 MVDSSTLEAM 165
           +V   T  A+
Sbjct: 96  IVGPKTYAAL 105


>gi|121533679|ref|ZP_01665506.1| 3D domain protein [Thermosinus carboxydivorans Nor1]
 gi|121307670|gb|EAX48585.1| 3D domain protein [Thermosinus carboxydivorans Nor1]
          Length = 210

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 7/94 (7%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  R L +G +   V+ L+ RL        +  +   F    + AVK+F+  + L+  G
Sbjct: 29  ALGERVLQVGATGDDVRELQIRLNELDFY--AGTVDGVFGPQTQHAVKMFEKANNLESDG 86

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNL-MRIKKLLE 188
           + D   L  M      ++ ++  NL  R K +L+
Sbjct: 87  IADQDLLTFM----QKKVPKVSRNLPERYKTVLD 116


>gi|16078346|ref|NP_389164.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221309139|ref|ZP_03590986.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313466|ref|ZP_03595271.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318388|ref|ZP_03599682.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322662|ref|ZP_03603956.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|731171|sp|P39800|XLYA_BACSU RecName: Full=N-acetylmuramoyl-L-alanine amidase XlyA; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           Flags: Precursor
 gi|496176|gb|AAA22645.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|535797|emb|CAA85403.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis]
 gi|1225965|emb|CAA94049.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|2633635|emb|CAB13138.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. subtilis str. 168]
          Length = 297

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 4/59 (6%)

Query: 107 SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           S   V +++  L            + G+   +      AV  FQ  +GL   G+   +T
Sbjct: 230 SGEHVFQVQRALAALYFYPDKGAVNNGIDGVYGPKTADAVARFQSVNGLTADGIYGPAT 288


>gi|167036901|ref|YP_001664479.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115320|ref|YP_004185479.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166855735|gb|ABY94143.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928411|gb|ADV79096.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 422

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               R L+ G     V+ L+  L  +G    +  +   F     + V  FQ    L P G
Sbjct: 38  TFGSRLLYSGTYGTDVEELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDG 95

Query: 156 MVDSSTLEAM 165
           +V   T  A+
Sbjct: 96  IVGPKTYAAL 105


>gi|308272732|emb|CBX29336.1| hypothetical protein N47_J03170 [uncultured Desulfobacterium sp.]
          Length = 234

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +LP  P         + R ++ L  +G     K L+  +D     AVK FQ   G+   G
Sbjct: 155 KLPSEPEK-----NRIMRFQKLLKEAGTYH--KSLTGTYDKDTLLAVKQFQSSKGIKQDG 207

Query: 156 MVDSSTLEAMNVPVDL 171
           +  S TL  +   +D 
Sbjct: 208 IAGSQTLMLLYRSIDR 223


>gi|229527893|ref|ZP_04417284.1| VgrG protein [Vibrio cholerae 12129(1)]
 gi|229334255|gb|EEN99740.1| VgrG protein [Vibrio cholerae 12129(1)]
          Length = 1037

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 671 IDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F +  ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V   TL A+
Sbjct: 774 PSHQTHPSYSIG-PVDGIVGKGTLLAL 799


>gi|321315030|ref|YP_004207317.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis BSn5]
 gi|320021304|gb|ADV96290.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis BSn5]
          Length = 297

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 4/61 (6%)

Query: 107 SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           S   V +++  L            + G+   +      AV  FQ  +GL   G+   +T 
Sbjct: 230 SGEHVFQVQRALAALYFYPDKGAVNNGIDGIYGPKTADAVARFQSVNGLTADGIYGPATK 289

Query: 163 E 163
            
Sbjct: 290 A 290


>gi|254502110|ref|ZP_05114261.1| phage lysozyme, putative [Labrenzia alexandrii DFL-11]
 gi|222438181|gb|EEE44860.1| phage lysozyme, putative [Labrenzia alexandrii DFL-11]
          Length = 296

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSSTLEAMN 166
              +  L+  L + G       +   F A  ++AVK FQ  +  L   G+   +T  A+ 
Sbjct: 171 GSDIMELQRSLKMLGF--DPGPIDGFFGAQTKAAVKDFQKAYPPLAVDGIPGPATRSALA 228

Query: 167 VPVDLR 172
             + LR
Sbjct: 229 RSISLR 234


>gi|239828311|ref|YP_002950935.1| carboxyl-terminal protease [Geobacillus sp. WCH70]
 gi|239808604|gb|ACS25669.1| carboxyl-terminal protease [Geobacillus sp. WCH70]
          Length = 480

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 29/126 (23%)

Query: 82  IAFYQDILSRGGW-------PELPIR--------PLHLG------NSSVSVQRLRERLII 120
           +  Y+ +   G W       P++ ++        PLH+        ++  V+  ++ L  
Sbjct: 352 LTLYKWLTPDGHWIHKKGVKPDVEVKQPDYFHVSPLHIEKELSFDMNNEQVKSAQQMLKG 411

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR------ 174
            G  DP +     F    ESAVK FQ  + L  +G +D +T E +   V   IR      
Sbjct: 412 LGF-DPGRTDG-YFSKETESAVKAFQKANKLPQTGKIDKNTAEVLQAKVMDAIRDDNNDV 469

Query: 175 QLQVNL 180
           QL+  +
Sbjct: 470 QLKTAM 475


>gi|311280300|ref|YP_003942531.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
 gi|308749495|gb|ADO49247.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
          Length = 300

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 64/216 (29%), Gaps = 60/216 (27%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGR 223
           +N+P     +QL +                 +++N     L     G    +   + +G+
Sbjct: 79  LNIP-----QQLIL----------PDTPHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQ 123

Query: 224 VDRQTPI-LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           + + TPI   + + R    P W               +   +Y+   N            
Sbjct: 124 LGKDTPINWTTAVERKKAGPTWT-----------PTAKMHAEYIAAGN------------ 160

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                               G  N M    +          H T     F   +R  + G
Sbjct: 161 ------------PLPSVVPAGPDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHG 203

Query: 343 CVRVRNIIDLDVWLLKDTPTWSR-YHIEEVVKTRKT 377
           CVR+RN  D   +L ++ P  +R   I+E VK    
Sbjct: 204 CVRLRN--DDIKFLFQNVPVGTRVQFIDEAVKATTE 237


>gi|260888125|ref|ZP_05899388.1| LysM domain/NLP/P60 family protein [Selenomonas sputigena ATCC
           35185]
 gi|330839997|ref|YP_004414577.1| NLP/P60 protein [Selenomonas sputigena ATCC 35185]
 gi|260862154|gb|EEX76654.1| LysM domain/NLP/P60 family protein [Selenomonas sputigena ATCC
           35185]
 gi|329747761|gb|AEC01118.1| NLP/P60 protein [Selenomonas sputigena ATCC 35185]
          Length = 278

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V +L++ L  +G L  S      F +  +SAV  FQ    L  +G+VD  T
Sbjct: 30  LSENSHGHDVFKLQKELKRTGYL--SDEPDGIFGSRTKSAVLAFQRAQSLKETGVVDRET 87

Query: 162 LEAM 165
              +
Sbjct: 88  WSRL 91


>gi|290956378|ref|YP_003487560.1| penicillin-binding membrane protein [Streptomyces scabiei 87.22]
 gi|260645904|emb|CBG68995.1| putative penicillin-binding membrane protein [Streptomyces scabiei
           87.22]
          Length = 356

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   +V++L +RL+     D    +   F    +  V+ FQ R  +   G+V   
Sbjct: 291 TLQQGSHGPAVRKL-QRLLNDHLPDLQLAVDGRFGPVTDGRVRQFQQRFAIVVDGIVGPQ 349

Query: 161 TLEAM 165
           T   +
Sbjct: 350 TWGHL 354



 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 8/88 (9%)

Query: 84  FYQDILSRG---GWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLD--PSKGLSVAFDAY 137
           FY D+ S G   G P+ +    +  G    +V++L +RL ++G +   PS  +   F   
Sbjct: 191 FYLDVRSAGPGSGTPDGIGTPTVRQGAQGEAVRKL-QRL-LNGHVPDLPSLAVDGDFGPA 248

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            ++ V+ +Q R  +   G+V   T   +
Sbjct: 249 TDARVREYQRRVEIIVDGIVGPQTWGML 276


>gi|228969115|ref|ZP_04130029.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228790604|gb|EEM38291.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 335

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGM 156
           P +P+  G+   +++ ++  L +S        +   F    E  VK +Q     L   G+
Sbjct: 274 PGKPIKRGDRGRNIEAIQRTLKLS--------VDGVFGKETEEKVKEYQRNSSFLSIDGV 325

Query: 157 VDSSTLEAM 165
           V   T  A+
Sbjct: 326 VGMQTWYAL 334


>gi|229179581|ref|ZP_04306933.1| Peptidoglycan-binding domain 1 protein [Bacillus cereus 172560W]
 gi|228603875|gb|EEK61344.1| Peptidoglycan-binding domain 1 protein [Bacillus cereus 172560W]
          Length = 571

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGL 151
              P + L  G+ +++V+ +++ L  I     D P   ++  +++   +AVK FQ +  L
Sbjct: 350 KSFPGKILKEGDQNLAVETIQKYLYHIRKRYTDIPEVRVNGTYNSSTANAVKAFQRQFQL 409

Query: 152 DPSGMVDSSTLEAMN 166
             +G VD  T   MN
Sbjct: 410 PENGAVDEVTWNKMN 424


>gi|315268212|gb|ADT95065.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS678]
          Length = 273

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V+ L++RL  +G    S  +   F    + A++ FQ +  L  +G     
Sbjct: 2   TLRKGSNGSQVRDLQQRLNAAG---ASLVVDGWFGDATQKAIEQFQDKQDLPRTGYAGVR 58

Query: 161 TLEAM 165
           TL  +
Sbjct: 59  TLALL 63


>gi|293402331|ref|ZP_06646468.1| spore cortex-lytic enzyme SleC [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291304178|gb|EFE45430.1| spore cortex-lytic enzyme SleC [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 356

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQM 147
           G W     R L  G+  + VQ+L+  L +      ++ P    S  F A +E +V+ FQ 
Sbjct: 274 GLW---TGRVLRRGDVGIEVQQLQYFLSVIAQTYTNIPPVDIDS-RFGAGLERSVRAFQR 329

Query: 148 RHGLDPSGMVDSSTLE 163
             GL   G+V   T  
Sbjct: 330 EFGLAQDGLVGQVTWN 345



 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 4/75 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P  P   L  G+   +V  ++E L        ++         F    E AV+ FQ +  
Sbjct: 175 PSYPGYALRRGSQGQNVFIIQELLNGIAVNYPNIPLIYPPDGIFGEVTERAVRTFQQQFN 234

Query: 151 LDPSGMVDSSTLEAM 165
           L   G+V  +T   +
Sbjct: 235 LSVDGIVGQTTWNQI 249


>gi|229073419|ref|ZP_04206555.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus cereus
           F65185]
 gi|228709726|gb|EEL61764.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus cereus
           F65185]
          Length = 335

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGM 156
           P +P+  G+   +++ ++  L +S        +   F    E  VK +Q     L   G+
Sbjct: 274 PGKPIKRGDRGRNIEAIQRTLRVS--------VDGIFGKETEEKVKEYQRNSSFLSIDGV 325

Query: 157 VDSSTLEAM 165
           V   T  A+
Sbjct: 326 VGMQTWYAL 334


>gi|254465139|ref|ZP_05078550.1| Putative peptidoglycan binding domain protein [Rhodobacterales
           bacterium Y4I]
 gi|206686047|gb|EDZ46529.1| Putative peptidoglycan binding domain protein [Rhodobacterales
           bacterium Y4I]
          Length = 3030

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           I P+   ++   V  L+E L + G  +D  +    AF    ++A++  Q R GL PSG V
Sbjct: 6   IHPISFLDTGEHVAALQEALGVEGFTVDAEELQHAAFGRSTQTALRELQERVGLTPSGNV 65

Query: 158 DSSTLEAMNVPVDLR 172
           D++T  A++  +D R
Sbjct: 66  DAATARAISERLDRR 80


>gi|206973101|ref|ZP_03234023.1| peptidoglycan-binding domain 1 protein [Bacillus cereus AH1134]
 gi|206731985|gb|EDZ49185.1| peptidoglycan-binding domain 1 protein [Bacillus cereus AH1134]
          Length = 595

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGL 151
              P   L  G+   +V  +++ L  I    LD P   +S  FDA   +AVK FQ  + +
Sbjct: 368 KSFPGYNLKEGDQKGAVLTVQKYLFHIRKKYLDIPEVIISGKFDANTVNAVKKFQKIYEI 427

Query: 152 DPSGMVDSSTLEAMN 166
             SG+VD  T   +N
Sbjct: 428 PESGIVDELTWNKLN 442



 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 8/84 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   SV+ L+  L   G  D    +   +    E +VK FQ   G   +G+V    
Sbjct: 458 LQNGSQGESVKTLQTLLKKFGYYDGQ--IDGFYGLGTEKSVKEFQKIKGFTVTGIVRKEL 515

Query: 162 LEAMN------VPVDLRIRQLQVN 179
              ++            +  L  N
Sbjct: 516 WRVLDELQHTYGSPRTTLNSLANN 539


>gi|311068810|ref|YP_003973733.1| spore cortex-lytic enzyme [Bacillus atrophaeus 1942]
 gi|310869327|gb|ADP32802.1| spore cortex-lytic enzyme [Bacillus atrophaeus 1942]
          Length = 309

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVDSS 160
           +  G +   V  L+ RL  +G  +    +   +      AV+ FQ + GL    G+V + 
Sbjct: 35  IQRGATGDDVIELQARLQYNGYYNG--KIDGVYGWGTYWAVRNFQNQFGLKEIDGLVGAQ 92

Query: 161 TLEAM 165
           T + +
Sbjct: 93  TKQIL 97


>gi|327440793|dbj|BAK17158.1| cell wall hydrolyses [Solibacillus silvestris StLB046]
          Length = 260

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL      +        +  Y   A++ FQ ++GL   G
Sbjct: 21  AFSGQDVQRGAFGDDVIELQARLQYLSYYNGKIDGKFGYGTY--WALRNFQEQYGLPVDG 78

Query: 156 MVDSSTLEAM 165
           +   ST E +
Sbjct: 79  IAGRSTKEKL 88


>gi|225427814|ref|XP_002275675.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 289

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+    +Q++++ L   G L  +      S  FD  +ES++K FQ  + L+ +G +D+
Sbjct: 51  KKGDKREGIQKVKQYLQRYGYLSSTHYSQMGSDDFDDALESSLKAFQTFYHLNSTGTLDA 110

Query: 160 STLEAMNVP 168
            T   M+ P
Sbjct: 111 PTATLMSRP 119


>gi|28199152|ref|NP_779466.1| histidinol-phosphate aminotransferase [Xylella fastidiosa
           Temecula1]
 gi|71274439|ref|ZP_00650727.1| Histidinol-phosphate aminotransferase [Xylella fastidiosa Dixon]
 gi|71900435|ref|ZP_00682567.1| Histidinol-phosphate aminotransferase [Xylella fastidiosa Ann-1]
 gi|182681883|ref|YP_001830043.1| histidinol-phosphate aminotransferase [Xylella fastidiosa M23]
 gi|32129587|sp|Q87C30|HIS8_XYLFT RecName: Full=Histidinol-phosphate aminotransferase; AltName:
           Full=Imidazole acetol-phosphate transaminase
 gi|226702185|sp|B2I5Y0|HIS8_XYLF2 RecName: Full=Histidinol-phosphate aminotransferase; AltName:
           Full=Imidazole acetol-phosphate transaminase
 gi|28057250|gb|AAO29115.1| histidinol-phosphate aminotransferase [Xylella fastidiosa
           Temecula1]
 gi|71164171|gb|EAO13885.1| Histidinol-phosphate aminotransferase [Xylella fastidiosa Dixon]
 gi|71729800|gb|EAO31899.1| Histidinol-phosphate aminotransferase [Xylella fastidiosa Ann-1]
 gi|182631993|gb|ACB92769.1| histidinol-phosphate aminotransferase [Xylella fastidiosa M23]
 gi|307578137|gb|ADN62106.1| histidinol-phosphate aminotransferase [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 365

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 74/204 (36%), Gaps = 29/204 (14%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
           FL      + + IP+   ETI QT    A      + G + ++P     L      +  L
Sbjct: 157 FLCSPSNPVGAAIPLQQIETILQTLAGTALVVVDEAYGEFSDVPSVVPLL-ARYPHLVVL 215

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQM------------RHGLDPSGMVDSSTL 162
           R  L  +  L   +  SV  DA++ + ++  Q               GL           
Sbjct: 216 RT-LSKAHALAAVRIGSVIADAHLVAVLRRCQAPYPLPTPCVSLAEQGLSA--------- 265

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR----ST 218
            A++V    R+ +++    R++  L    G+R V  +     L   ++ +   +    + 
Sbjct: 266 AALHVTAQ-RVAEIRAERERLRAALACLSGVRRVYPSQGNFLLVRFDDAEAAFQALYAAG 324

Query: 219 VIVGRVDRQTPILHSRINRIMFNP 242
           V+V R  R  P LH  +   +  P
Sbjct: 325 VVV-RDQRAAPQLHDALRLTVGTP 347


>gi|332307806|ref|YP_004435657.1| Peptidoglycan-binding domain 1 protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175135|gb|AEE24389.1| Peptidoglycan-binding domain 1 protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 199

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           ++RL     L      S  FD     A K FQ  +GL  +G+ D +TL  MN
Sbjct: 145 KQRLRKMDYLK--DMGSSDFDQATLDAFKHFQRDNGLAQTGVPDQNTL--MN 192


>gi|168186698|ref|ZP_02621333.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum C str. Eklund]
 gi|169295310|gb|EDS77443.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum C str. Eklund]
          Length = 309

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL LG     V+ L+  L   G    + G    F +  E A+  FQ R+ L+   +   S
Sbjct: 85  PLRLGCKGNDVKALQNNLNKFGYKINADG---IFGSSTEIALYDFQRRNNLNRDCIAGES 141

Query: 161 TLEAMNVPVDLR 172
           TL+ + +    +
Sbjct: 142 TLKRLALEPTEK 153


>gi|29566134|ref|NP_817703.1| gp25 [Mycobacterium phage Che9c]
 gi|29424859|gb|AAN12586.1| gp25 [Mycobacterium phage Che9c]
          Length = 317

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 103 HLGNSSVSVQRLRERLI--ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            LG+++  V+ L++ L    SG       +   F    E  V  FQ R G+   G+V   
Sbjct: 182 QLGDNNDRVRSLQQFLNDNFSGY--SKLDVDGDFGPLTEKVVAEFQRRVGVAADGIVGPV 239

Query: 161 TLEAM 165
           TL  +
Sbjct: 240 TLAKL 244


>gi|296329600|ref|ZP_06872085.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305673998|ref|YP_003865670.1| N-acetylmuramoyl-L-alanine amidase; PBSZ phage [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296153098|gb|EFG93962.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305412242|gb|ADM37361.1| N-acetylmuramoyl-L-alanine amidase; PBSZ phage [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 297

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 4/61 (6%)

Query: 107 SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           S   V +++  L            + G+   +      AV  FQ  +GL   G+   +T 
Sbjct: 230 SGEHVFQVQRALAALYFYPDKGAVNNGIDGIYGPKTADAVARFQSVNGLTADGIYGPATK 289

Query: 163 E 163
            
Sbjct: 290 A 290


>gi|296131512|ref|YP_003638762.1| Peptidoglycan-binding domain 1 protein [Cellulomonas flavigena DSM
           20109]
 gi|296023327|gb|ADG76563.1| Peptidoglycan-binding domain 1 protein [Cellulomonas flavigena DSM
           20109]
          Length = 157

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLI--ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           L  G+S   VQ L++          +P+      F    E  V+  Q R G++  G+   
Sbjct: 73  LKRGDSGAGVQALQKAYNSCYKALYEPAIAEDGVFGPTTEDRVRQMQRREGIEVDGIAGE 132

Query: 160 STLEAM 165
            T  ++
Sbjct: 133 VTRNSI 138


>gi|209972932|ref|YP_002300379.1| gp19.3 [Bacillus phage SPO1]
 gi|209871252|gb|ACI91008.1| gp19.3 [Bacillus phage SPO1]
          Length = 343

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++S +V+ ++E+L  +G           F A  ESA+K FQ   G+   G+   ++
Sbjct: 179 LSKGDNSSAVKTMQEKLNAAGF--SVGKADGIFGAKTESALKAFQKSVGISADGLYGPTS 236

Query: 162 LEAM 165
              +
Sbjct: 237 KAKL 240



 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 127 SKGLSVAFDAYVESAVKLFQM-RHGLDPSGMVDSSTLEAM 165
           + G+   +    + A++ +Q  + GL   G+   +T +A+
Sbjct: 292 NNGIDGYWGPKTQDAIRRYQSTKSGLKTDGIYGPATRKAL 331


>gi|297155629|gb|ADI05341.1| putative serine-threonine protein kinase [Streptomyces
           bingchenggensis BCW-1]
          Length = 562

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+   +V++++  L          G+   F    ++AV  FQ  H L   G V   T 
Sbjct: 498 QQGSRGAAVRQVQCILKARKYDIGPHGIDGQFGPDTKAAVIAFQRDHNLHRDGQVGEDTW 557

Query: 163 EAM 165
            A+
Sbjct: 558 PAL 560


>gi|253687096|ref|YP_003016286.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251753674|gb|ACT11750.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 356

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 41/161 (25%), Gaps = 42/161 (26%)

Query: 189 QKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVI 246
                  +++N     L     G K  +   + +G + + TPI   + + R    P W  
Sbjct: 92  PDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTSVQRKKAGPTWT- 150

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                        +   +Y                                     G  N
Sbjct: 151 ----------PTAKMHAEYAAR------------------------GETLQKVFPAGPDN 176

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
            M    +   +      H T     F   +R  + GCVR+R
Sbjct: 177 PMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLR 212


>gi|332670253|ref|YP_004453261.1| peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
 gi|332339291|gb|AEE45874.1| Peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
          Length = 373

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 43/126 (34%), Gaps = 22/126 (17%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG--WPELPIRPLHLGNS- 107
           + D  L  V   ID D P           +A   +          W +L      L ++ 
Sbjct: 166 QADAELTAVQQQIDDDTP---------LREASERFNAAAVALEAAWLQLYAATGCLTDAE 216

Query: 108 ----SVSVQR----LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                  V      L+E L  +G    +  +   +     +AV+  Q  HGL  +G VD 
Sbjct: 217 QAAAHDVVAARTSTLQESLSATGHYTGT--IDGIYGPATVAAVESLQSAHGLPVTGTVDR 274

Query: 160 STLEAM 165
           +T  A+
Sbjct: 275 ATDAAL 280


>gi|256785652|ref|ZP_05524083.1| lipoprotein [Streptomyces lividans TK24]
          Length = 270

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 42/147 (28%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G++   V+ L+ RL     L    G +  +D   E AV  FQ + GL  +G  D  T+
Sbjct: 66  KRGDTGRDVRELQARLRQVEWL--VDGPTGTYDDLTERAVSGFQGKRGLPRTGRTD--TV 121

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMG--LRYVLVNIPAA----------------- 203
                              R+   +  + G    Y++   PAA                 
Sbjct: 122 TW----------------QRLLG-MSHEPGKWDLYLMGGQPAAAPDPRCTSGRVLCVSKS 164

Query: 204 --SLEAVENGKVGLRSTVIVGRVDRQT 228
             +L  + +G+     +V  G     T
Sbjct: 165 SRTLRWMIDGRTVSTMSVRFGSQYTPT 191


>gi|312109514|ref|YP_003987830.1| carboxyl-terminal protease [Geobacillus sp. Y4.1MC1]
 gi|311214615|gb|ADP73219.1| carboxyl-terminal protease [Geobacillus sp. Y4.1MC1]
          Length = 480

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 29/126 (23%)

Query: 82  IAFYQDILSRGGW-------PELPIR--------PLHLG------NSSVSVQRLRERLII 120
           +  Y+ +   G W       P++ ++        PLH+        ++  V+  ++ L  
Sbjct: 352 LTLYKWLTPDGHWIHKKGVKPDVEVKQPDYFHASPLHIEKALSFDMNNEQVKNAQQMLKG 411

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR------ 174
            G  DP +     F    E+AVK FQ  + L P+G +D +T + +   V   IR      
Sbjct: 412 IGF-DPGRTDG-YFSKETEAAVKAFQKANKLPPTGKIDKNTADVLQAKVMEAIRNEDNDV 469

Query: 175 QLQVNL 180
           QL+  +
Sbjct: 470 QLKTAM 475


>gi|239979525|ref|ZP_04702049.1| hypothetical protein SalbJ_08818 [Streptomyces albus J1074]
 gi|291451393|ref|ZP_06590783.1| predicted protein [Streptomyces albus J1074]
 gi|291354342|gb|EFE81244.1| predicted protein [Streptomyces albus J1074]
          Length = 301

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           G+  A+    E AVK  Q R GL   G++   T EA+
Sbjct: 263 GIDGAYGPATERAVKRLQDREGLVVDGIMGPHTWEAL 299


>gi|147790365|emb|CAN59960.1| hypothetical protein VITISV_011608 [Vitis vinifera]
          Length = 319

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 6/72 (8%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
             G+    + +L++ L   G L        +   +  FD  +E A+K +Q  + L  SG 
Sbjct: 42  QKGHKVKDIHKLKKYLQQFGYLSYSHSEHQTHADNDDFDDLLEFAIKTYQTNYYLKASGN 101

Query: 157 VDSSTLEAMNVP 168
           +DS T+  M  P
Sbjct: 102 LDSETVSVMVKP 113


>gi|256824798|ref|YP_003148758.1| peptidoglycan binding protein [Kytococcus sedentarius DSM 20547]
 gi|256688191|gb|ACV05993.1| putative peptidoglycan binding protein [Kytococcus sedentarius DSM
           20547]
          Length = 335

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 96  ELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           ++P  R +  G     V++L++ L+  G    +   +   D     A++ +Q   G+D +
Sbjct: 88  KVPAFRKIGAGTEGADVKQLQQLLMQGGHFAGTVDGTAGKD--TVQAIRAWQRSQGIDAT 145

Query: 155 GMVDSS 160
           G+V   
Sbjct: 146 GVVGPG 151


>gi|33599771|ref|NP_887331.1| putative type II secretion system protein [Bordetella
           bronchiseptica RB50]
 gi|33567368|emb|CAE31281.1| putative type II secretion system protein [Bordetella
           bronchiseptica RB50]
          Length = 459

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 5/69 (7%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           D+  R  W          G    SVQ L++RL  +G L  +      + A    A+  FQ
Sbjct: 367 DLAWRAPWRPEDFAS---GGPHPSVQALQQRLGAAGLL--ATRADGIYGAQTRQALASFQ 421

Query: 147 MRHGLDPSG 155
             H L  +G
Sbjct: 422 RDHALPATG 430


>gi|304407661|ref|ZP_07389312.1| carboxyl-terminal protease [Paenibacillus curdlanolyticus YK9]
 gi|304343144|gb|EFM08987.1| carboxyl-terminal protease [Paenibacillus curdlanolyticus YK9]
          Length = 487

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L        V+ L++ L   G           F A  + AV+ FQ    L  +G+V+++T
Sbjct: 393 LRKDQLGDDVRSLQQMLKALGY--KVDRSDGYFSAVTDQAVRQFQQASDLPVNGVVNNAT 450

Query: 162 LEAM 165
            +A+
Sbjct: 451 ADAI 454


>gi|148257802|ref|YP_001242387.1| hypothetical protein BBta_6577 [Bradyrhizobium sp. BTAi1]
 gi|146409975|gb|ABQ38481.1| hypothetical protein BBta_6577 [Bradyrhizobium sp. BTAi1]
          Length = 404

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 9/92 (9%)

Query: 81  AIAFYQDILSRGGWP-----ELPIRPLHLGN--SSVSVQRLRERLIISGDLDPSKGLSVA 133
           A   Y   L+ G W           P H  +  S+  +  L+ +L   G           
Sbjct: 181 AANRYDARLA-GAWKRWVRKTASTAPPHAPDDLSADEITDLQRKLRRLGYASVGNPDG-K 238

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           F      A+  FQ   GL  SG +D++T EA+
Sbjct: 239 FGTKTVGALAQFQAHEGLPVSGRLDAATREAL 270


>gi|170730538|ref|YP_001775971.1| histidinol-phosphate aminotransferase [Xylella fastidiosa M12]
 gi|226702186|sp|B0U3B2|HIS8_XYLFM RecName: Full=Histidinol-phosphate aminotransferase; AltName:
           Full=Imidazole acetol-phosphate transaminase
 gi|167965331|gb|ACA12341.1| histidinol-phosphate aminotransferase [Xylella fastidiosa M12]
          Length = 365

 Score = 44.4 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 74/204 (36%), Gaps = 29/204 (14%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
           FL      + + IP+   ETI QT    A      + G + ++P     L      +  L
Sbjct: 157 FLCSPSNPVGAAIPLQQIETILQTLAGTALVVVDEAYGEFSDVPSVVPLL-ARYPHLVVL 215

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQM------------RHGLDPSGMVDSSTL 162
           R  L  +  L   +  SV  DA++ + ++  Q               GL           
Sbjct: 216 RT-LSKAHALAAVRIGSVIADAHLVAVLRRCQAPYPLPTPCVSLAEQGLSA--------- 265

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR----ST 218
            A++V    R+ +++    R++  L    G+R V  +     L   ++ +   +    + 
Sbjct: 266 AALHVTAQ-RVAEIRAERERLRAALACLSGVRRVYPSQGNFLLVRFDDAEAAFQALYAAG 324

Query: 219 VIVGRVDRQTPILHSRINRIMFNP 242
           V+V R  R  P LH  +   +  P
Sbjct: 325 VVV-RDQRAAPQLHDALRLTVGTP 347


>gi|310828762|ref|YP_003961119.1| Peptidoglycan-binding lysin domain protein [Eubacterium limosum
           KIST612]
 gi|308740496|gb|ADO38156.1| Peptidoglycan-binding lysin domain protein [Eubacterium limosum
           KIST612]
          Length = 330

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 109 VSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V R++E L   G D+    G          +A+K FQ ++GL+  G+    T  A+ +
Sbjct: 275 TEVARIQEALKRHGHDIPVDGGAGPI----TFAALKDFQAKNGLEADGICGDLTRAALGI 330


>gi|229526247|ref|ZP_04415651.1| VgrG protein [Vibrio cholerae bv. albensis VL426]
 gi|229336405|gb|EEO01423.1| VgrG protein [Vibrio cholerae bv. albensis VL426]
          Length = 1017

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 671 IDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F +  ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V   TL A+
Sbjct: 774 PSHQTHPSYSIG-AVDGIVGKGTLLAL 799


>gi|18496915|ref|NP_569765.1| hypothetical protein TM4_gp30 [Mycobacterium phage TM4]
 gi|4336066|gb|AAD17597.1| gp30 [Mycobacterium phage TM4]
          Length = 400

 Score = 44.4 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 9/83 (10%)

Query: 103 HLGNSSVSVQRLRERLII----SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            LG     V+ ++++LI       D  P    S  +D   ++A+  FQ R GL  +G+ D
Sbjct: 7   QLGMQGEQVKVIQQKLIAKYQWVRDRYPRLTASGVYDVNTQAAIVEFQFRAGLPVTGIAD 66

Query: 159 SSTLEAMNV-----PVDLRIRQL 176
            +T   +       P   RI  L
Sbjct: 67  YATQVRLGAVAPAPPPRQRIMVL 89


>gi|168184550|ref|ZP_02619214.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Bf]
 gi|237795281|ref|YP_002862833.1| peptidoglycan-binding domain 1 [Clostridium botulinum Ba4 str. 657]
 gi|182672321|gb|EDT84282.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Bf]
 gi|229262124|gb|ACQ53157.1| peptidoglycan-binding domain 1 [Clostridium botulinum Ba4 str. 657]
          Length = 281

 Score = 44.4 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 5/113 (4%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAI--AFYQDILSRGGWPELPIRPLHLGNSSVSVQ 112
            + +      +  P  SK      +  +    Y ++ SR  +  LP      G      +
Sbjct: 167 LVGKTTPTTSNSKPSTSKPVQTNKKHPLINQLYAEM-SRQDFNTLP--TCRQGARGNITK 223

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +++ LI  G    S G    F     +A+K  Q    L   G+V   T   +
Sbjct: 224 TIQQMLINIGYPVGSYGADRVFGNGTVTAIKALQRDCNLSVDGVVGKETWGVL 276


>gi|119775164|ref|YP_927904.1| membrane-bound lytic transglycolase-like protein [Shewanella
           amazonensis SB2B]
 gi|119767664|gb|ABM00235.1| membrane-bound lytic transglycolase-related protein [Shewanella
           amazonensis SB2B]
          Length = 401

 Score = 44.4 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            G  P     PL    +   ++ ++++LI  G  D      +   +   +A++ FQ R+ 
Sbjct: 319 NGAKPLKVAPPLQPRRTRDGLKAMQQKLIELGY-DIGAADGII-GSKTSAAIRDFQRRNK 376

Query: 151 LDPSGMVDSSTLEAM 165
           L P G  D +TL A+
Sbjct: 377 LVPDGFADDATLNAL 391


>gi|293412742|ref|ZP_06655410.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291468389|gb|EFF10882.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 192

 Score = 44.4 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 95  WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 152

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 153 KTDGVVGFSTLVHL 166


>gi|317128557|ref|YP_004094839.1| spore cortex-lytic enzyme [Bacillus cellulosilyticus DSM 2522]
 gi|315473505|gb|ADU30108.1| spore cortex-lytic enzyme [Bacillus cellulosilyticus DSM 2522]
          Length = 372

 Score = 44.4 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G +   V  L+ RL   G  +    +   F      AV+ +Q   G++ +G+V  +T
Sbjct: 39  IQRGATGDDVVELQARLQYIGFYEG--DIDGVFGWGTYWAVRNYQQEFGMEVTGLVGENT 96

Query: 162 LEAMNVPVD 170
              +    D
Sbjct: 97  KAMLERSTD 105


>gi|254225886|ref|ZP_04919489.1| vgrG protein [Vibrio cholerae V51]
 gi|125621613|gb|EAZ49944.1| vgrG protein [Vibrio cholerae V51]
          Length = 1017

 Score = 44.4 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 671 IDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F +  ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V   TL A+
Sbjct: 774 PSHQTHPSYSIG-AVDGIVGKGTLLAL 799


>gi|220910238|ref|YP_002485549.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425]
 gi|219866849|gb|ACL47188.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425]
          Length = 217

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 52/177 (29%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            Q +    +++++    +   +         V +GR   +TP+   ++ +++ NP W  P
Sbjct: 84  PQVVAPLRLVISLSRRRVTVFQGSTALKSYPVAIGRPGWETPVGKFQVKQLIRNPTWKHP 143

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
               + D++                    KG                           N 
Sbjct: 144 ---FKGDII--------------------KGGH-----------------------PDNP 157

Query: 308 MASTKIEF--YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           +    I F    +N   MH TP P    +V R  + GCVR+ N  D+     K    
Sbjct: 158 LGKFWIGFWTDGKNWVGMHGTPNP---ESVGRAASHGCVRMYN-KDIAELFAKVQLG 210


>gi|147671421|ref|YP_001214855.1| vgrG protein [Vibrio cholerae O395]
 gi|262167069|ref|ZP_06034785.1| VgrG protein [Vibrio cholerae RC27]
 gi|146313804|gb|ABQ18344.1| vgrG protein [Vibrio cholerae O395]
 gi|227014751|gb|ACP10960.1| vgrG protein [Vibrio cholerae O395]
 gi|262024524|gb|EEY43209.1| VgrG protein [Vibrio cholerae RC27]
          Length = 1017

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 671 IDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F +  ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V   TL A+
Sbjct: 774 PSHQTHPSYSIG-AVDGIVGKGTLLAL 799


>gi|15600894|ref|NP_232524.1| vgrG protein [Vibrio cholerae O1 biovar eltor str. N16961]
 gi|121586876|ref|ZP_01676657.1| vgrG protein [Vibrio cholerae 2740-80]
 gi|153817727|ref|ZP_01970394.1| vgrG protein [Vibrio cholerae NCTC 8457]
 gi|153821639|ref|ZP_01974306.1| vgrG protein [Vibrio cholerae B33]
 gi|227811749|ref|YP_002811759.1| vgrG protein [Vibrio cholerae M66-2]
 gi|229506709|ref|ZP_04396218.1| VgrG protein [Vibrio cholerae BX 330286]
 gi|229510497|ref|ZP_04399977.1| VgrG protein [Vibrio cholerae B33]
 gi|229517372|ref|ZP_04406817.1| VgrG protein [Vibrio cholerae RC9]
 gi|229605182|ref|YP_002875886.1| VgrG protein [Vibrio cholerae MJ-1236]
 gi|254850390|ref|ZP_05239740.1| vgrG protein [Vibrio cholerae MO10]
 gi|255746058|ref|ZP_05420005.1| VgrG protein [Vibrio cholera CIRS 101]
 gi|262162104|ref|ZP_06031119.1| VgrG protein [Vibrio cholerae INDRE 91/1]
 gi|298499985|ref|ZP_07009791.1| vgrG protein [Vibrio cholerae MAK 757]
 gi|9657510|gb|AAF96037.1| vgrG protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121548919|gb|EAX58960.1| vgrG protein [Vibrio cholerae 2740-80]
 gi|126511769|gb|EAZ74363.1| vgrG protein [Vibrio cholerae NCTC 8457]
 gi|126520836|gb|EAZ78059.1| vgrG protein [Vibrio cholerae B33]
 gi|227010891|gb|ACP07102.1| vgrG protein [Vibrio cholerae M66-2]
 gi|229345408|gb|EEO10381.1| VgrG protein [Vibrio cholerae RC9]
 gi|229352942|gb|EEO17882.1| VgrG protein [Vibrio cholerae B33]
 gi|229357060|gb|EEO21978.1| VgrG protein [Vibrio cholerae BX 330286]
 gi|229371668|gb|ACQ62090.1| VgrG protein [Vibrio cholerae MJ-1236]
 gi|254846095|gb|EET24509.1| vgrG protein [Vibrio cholerae MO10]
 gi|255735812|gb|EET91210.1| VgrG protein [Vibrio cholera CIRS 101]
 gi|262028179|gb|EEY46837.1| VgrG protein [Vibrio cholerae INDRE 91/1]
 gi|297541966|gb|EFH78017.1| vgrG protein [Vibrio cholerae MAK 757]
          Length = 1017

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 671 IDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F +  ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V   TL A+
Sbjct: 774 PSHQTHPSYSIG-AVDGIVGKGTLLAL 799


>gi|220920071|ref|YP_002495372.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219944677|gb|ACL55069.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 339

 Score = 44.4 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 46/179 (25%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L ++  ++ ++V+  A  + A   +G +       +G  ++  P    ++  I+F+P   
Sbjct: 198 LPEEPKVQRIVVDKEALQVRAYGGDGALLAVYPASIGSEEKPAPQGTFKVKGIVFDP--- 254

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
                           D  Y        +  K                  F  R  PG  
Sbjct: 255 ----------------DYTYDPKYGFAGVHAK----------------HKFTIR--PGPN 280

Query: 306 NAMASTKIEFY-SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           N +    I+          H TP+P     + + E+ GC+R+ N    DL   ++K   
Sbjct: 281 NPVGLVWIDLSAESYGI--HGTPDP---EKIGKTESHGCIRLTNWDARDLARHVVKGAT 334


>gi|298293414|ref|YP_003695353.1| peptidoglycan-binding protein [Starkeya novella DSM 506]
 gi|296929925|gb|ADH90734.1| Peptidoglycan-binding domain 1 protein [Starkeya novella DSM 506]
          Length = 263

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 8/64 (12%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG------LDPSGMVDSST 161
           S  V RL+ RL     L  +      F    E AV+LFQ R+       ++  G V   T
Sbjct: 23  SPEVARLQARLNDV--LGSALIEDGDFGVATEDAVRLFQARYTDPTGGEIEVDGRVGPET 80

Query: 162 LEAM 165
             A+
Sbjct: 81  WAAL 84


>gi|281180358|dbj|BAI56688.1| general secretion pathway protein A [Escherichia coli SE15]
          Length = 489

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|226314867|ref|YP_002774763.1| carboxyl-terminal processing protease precursor [Brevibacillus
           brevis NBRC 100599]
 gi|226097817|dbj|BAH46259.1| putative carboxyl-terminal processing protease precursor
           [Brevibacillus brevis NBRC 100599]
          Length = 466

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)

Query: 100 RPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           + L    +   V+ L  +LI+ G +L P +     FD   E A+K FQ    L+ +G VD
Sbjct: 376 KVLQRDMAGTDVKNL--QLILKGLNLSPGREDG-YFDEKTEEAIKQFQTSSKLEVTGKVD 432

Query: 159 SSTLEAM 165
           + T  ++
Sbjct: 433 AKTRSSL 439


>gi|229018065|ref|ZP_04174940.1| Spore cortex-lytic enzyme [Bacillus cereus AH1273]
 gi|229024246|ref|ZP_04180705.1| Spore cortex-lytic enzyme [Bacillus cereus AH1272]
 gi|228737021|gb|EEL87557.1| Spore cortex-lytic enzyme [Bacillus cereus AH1272]
 gi|228743156|gb|EEL93281.1| Spore cortex-lytic enzyme [Bacillus cereus AH1273]
          Length = 259

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQKGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQQKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|225452580|ref|XP_002280833.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147807820|emb|CAN73129.1| hypothetical protein VITISV_030257 [Vitis vinifera]
          Length = 319

 Score = 44.4 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY------VESAVKLFQMRHGLDPSGM 156
           H G+    +Q+L++ L   G L  S+  +            +ESA+K +Q  + L+ +G 
Sbjct: 50  HKGDEVNGIQKLKKYLEQFGYLSYSRSKNQTHADDDDFDDLLESAIKTYQANYHLEATGD 109

Query: 157 VDSSTLEAMNVP 168
           +DS T+  M  P
Sbjct: 110 LDSETVSEMVKP 121


>gi|328555228|gb|AEB25720.1| carboxy-terminal processing serine protease, cleaves SpoIVFA, this
           results in processing of pro-SigK [Bacillus
           amyloliquefaciens TA208]
 gi|328913589|gb|AEB65185.1| carboxy-terminal processing serine protease, cleaves SpoIVFA, this
           results in processing of pro-SigK [Bacillus
           amyloliquefaciens LL3]
          Length = 466

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 23/106 (21%)

Query: 82  IAFYQDILSRGGW-------PELPI--------------RPLHLGNSSVSVQRLRERLII 120
           +  Y+ +  +G W       P + +              +PL    +S  V+  +  L  
Sbjct: 337 LTLYKWLTPKGNWIHKKGITPTIAVSQPDYFAAGPLQLKQPLQPDMNSADVKHAQILLKG 396

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            G  DP +     F   ++ AV  FQ R+ LD + ++D  T E MN
Sbjct: 397 LGF-DPGRADG-YFSKTMKKAVLAFQDRNKLDKTAVIDKKTAEKMN 440


>gi|308175255|ref|YP_003921960.1| carboxy-terminal processing serine protease [Bacillus
           amyloliquefaciens DSM 7]
 gi|307608119|emb|CBI44490.1| carboxy-terminal processing serine protease, cleaves SpoIVFA, this
           results in processing of pro-SigK [Bacillus
           amyloliquefaciens DSM 7]
          Length = 466

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 23/106 (21%)

Query: 82  IAFYQDILSRGGW-------PELPI--------------RPLHLGNSSVSVQRLRERLII 120
           +  Y+ +  +G W       P + +              +PL    +S  V+  +  L  
Sbjct: 337 LTLYKWLTPKGNWIHKKGITPTIAVSQPDYFAAGPLQLKQPLQPDMNSADVKHAQILLKG 396

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            G  DP +     F   ++ AV  FQ R+ LD + ++D  T E MN
Sbjct: 397 LGF-DPGRADG-YFSKTMKKAVLAFQDRNKLDKTAVIDKKTAEKMN 440


>gi|117625600|ref|YP_858923.1| putative general secretion pathway protein A [Escherichia coli APEC
           O1]
 gi|115514724|gb|ABJ02799.1| putative general secretion pathway protein A [Escherichia coli APEC
           O1]
          Length = 191

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L  S   S  +   +   +K FQ  H L   G+V  STL  +
Sbjct: 124 LHISTESSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHL 165


>gi|2632002|emb|CAA05561.1| N-Acetylmuramoyl-L-alanine amidase [Bacillus subtilis]
          Length = 103

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 4/59 (6%)

Query: 107 SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           S   V +++  L            + G+   +      AV  FQ  +GL   G+   +T
Sbjct: 36  SGEHVFQVQRALAALYFYPDKGAVNNGIDGVYGPKTADAVARFQSVNGLTADGIYGPAT 94


>gi|295401143|ref|ZP_06811116.1| carboxyl-terminal protease [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976736|gb|EFG52341.1| carboxyl-terminal protease [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 480

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 29/126 (23%)

Query: 82  IAFYQDILSRGGW-------PELPIR--------PLHLG------NSSVSVQRLRERLII 120
           +  Y+ +   G W       P++ ++        PLH+        ++  V+  ++ L  
Sbjct: 352 LTLYKWLTPDGHWIHKKGVKPDVEVKQPDYFHASPLHIEKALSFDMNNEQVKNAQQMLKG 411

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR------ 174
            G  DP +     F    E+AVK FQ  + L P+G +D +T + +   V   IR      
Sbjct: 412 IGF-DPGRTDG-YFSKETEAAVKAFQKANKLPPTGKIDKNTADVLQAKVMDAIRNEDNDV 469

Query: 175 QLQVNL 180
           QL+  +
Sbjct: 470 QLKTAM 475


>gi|306816334|ref|ZP_07450472.1| general secretion pathway protein A [Escherichia coli NC101]
 gi|305850730|gb|EFM51187.1| general secretion pathway protein A [Escherichia coli NC101]
          Length = 489

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|209525179|ref|ZP_03273722.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328]
 gi|209494364|gb|EDZ94676.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328]
          Length = 178

 Score = 44.4 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 55/170 (32%), Gaps = 48/170 (28%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
            L+       +++ +    +  + N +V     + +GR   +TPI H ++ +++ +P W 
Sbjct: 44  WLQYSPSQLELVIRLGERRVYVMNNARVVTSYPIAIGRNGWETPIGHYQVIQMIEDPTWE 103

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P   +  D++   R +P  L  + I                    +  N+         
Sbjct: 104 HP---LNGDIIPPGRDNP--LGSHWIGFWT----------------DGTNY--------- 133

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
                             H TP            + GCVR+ N   L ++
Sbjct: 134 ---------------IGFHGTPNEETVGQ---AVSHGCVRMFNRDVLALF 165


>gi|315298621|gb|EFU57876.1| conserved hypothetical protein [Escherichia coli MS 16-3]
          Length = 489

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|110643562|ref|YP_671292.1| general secretion pathway protein A [Escherichia coli 536]
 gi|191171523|ref|ZP_03033071.1| putative general secretory pathway protein A [Escherichia coli F11]
 gi|300974002|ref|ZP_07172409.1| hypothetical protein HMPREF9553_00369 [Escherichia coli MS 200-1]
 gi|110345154|gb|ABG71391.1| probable general secretion pathway protein A [Escherichia coli 536]
 gi|190908150|gb|EDV67741.1| putative general secretory pathway protein A [Escherichia coli F11]
 gi|222035032|emb|CAP77775.1| general secretion pathway protein A [Escherichia coli LF82]
 gi|300309012|gb|EFJ63532.1| hypothetical protein HMPREF9553_00369 [Escherichia coli MS 200-1]
 gi|312947874|gb|ADR28701.1| general secretion pathway protein A [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|324014939|gb|EGB84158.1| hypothetical protein HMPREF9533_01001 [Escherichia coli MS 60-1]
          Length = 489

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|85859357|ref|YP_461559.1| putative peptidoglycan binding protein [Syntrophus aciditrophicus
           SB]
 gi|85722448|gb|ABC77391.1| putative peptidoglycan binding protein [Syntrophus aciditrophicus
           SB]
          Length = 300

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +     Q L+  L   G  DP   +   F      AV  FQ   G+   G    +T  A+
Sbjct: 234 DKGDKTQWLQNALNQLG-ADPKLTVDGRFGPATRRAVMKFQTTAGIPADGKAGPATEAAI 292


>gi|15218963|ref|NP_176205.1| matrixin family protein [Arabidopsis thaliana]
 gi|4249376|gb|AAD14473.1| Strong similarity to gi|2829864 F3I6.6 zinc metalloproteinase
           homolog from Arabidopsis thaliana BAC gb|AC002396. EST
           gb|Z26412 comes from this gene
 gi|51971615|dbj|BAD44472.1| predicted GPI-anchored protein [Arabidopsis thaliana]
 gi|94442451|gb|ABF19013.1| At1g59970 [Arabidopsis thaliana]
 gi|332195524|gb|AEE33645.1| matrix metalloprotease domain-containing protein [Arabidopsis
           thaliana]
          Length = 360

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 1/81 (1%)

Query: 89  LSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
            ++  W     +   H+G +   + +L++     G +  +   +  FD  ++SA+  +Q 
Sbjct: 37  ATQNAWETFSKLAGCHIGENINGLSKLKQYFRRFGYITTTGNCTDDFDDVLQSAINTYQK 96

Query: 148 RHGLDPSGMVDSSTLEAMNVP 168
              L  +G +DSSTL  +  P
Sbjct: 97  NFNLKVTGKLDSSTLRQIVKP 117


>gi|323939255|gb|EGB35467.1| gspA protein [Escherichia coli E482]
          Length = 489

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|223986583|ref|ZP_03636578.1| hypothetical protein HOLDEFILI_03900 [Holdemania filiformis DSM
           12042]
 gi|223961442|gb|EEF65959.1| hypothetical protein HOLDEFILI_03900 [Holdemania filiformis DSM
           12042]
          Length = 159

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 32/65 (49%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             R L +GN  + VQ+ ++ L      +P   +   F    + AV+ FQ  +GL+  G++
Sbjct: 87  STRTLRVGNIGLGVQKFQQYLNELIAPNPRLVVDGNFGQNTKRAVETFQALNGLNVDGVI 146

Query: 158 DSSTL 162
            ++T 
Sbjct: 147 GNNTW 151


>gi|331659613|ref|ZP_08360551.1| putative general secretion pathway protein A [Escherichia coli
           TA206]
 gi|324009014|gb|EGB78233.1| hypothetical protein HMPREF9532_01265 [Escherichia coli MS 57-2]
 gi|331052828|gb|EGI24861.1| putative general secretion pathway protein A [Escherichia coli
           TA206]
          Length = 489

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|331649120|ref|ZP_08350206.1| putative general secretion pathway protein A [Escherichia coli
           M605]
 gi|330909365|gb|EGH37879.1| general secretion pathway protein A [Escherichia coli AA86]
 gi|331041618|gb|EGI13762.1| putative general secretion pathway protein A [Escherichia coli
           M605]
          Length = 489

 Score = 44.4 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|326803031|ref|YP_004320849.1| hypothetical protein HMPREF9243_0507 [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651168|gb|AEA01351.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
          Length = 471

 Score = 44.4 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           +   G  Y+ V+IP   L   ENG++ L + VI G+    T
Sbjct: 334 DNFFGDTYIEVDIPNQKLFLYENGQLSLETDVITGQDKSPT 374


>gi|224146279|ref|XP_002325947.1| predicted protein [Populus trichocarpa]
 gi|222862822|gb|EEF00329.1| predicted protein [Populus trichocarpa]
          Length = 308

 Score = 44.4 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           +  G +   +  L++ L   G         S  FD ++E A+K +Q    L+ +G +DSS
Sbjct: 46  IQKGQTVEGLIELKQYLKKFGYYPSDITLTSSDFDDHLELALKTYQEYFHLNVTGNLDSS 105

Query: 161 TLEAMNVP 168
           T++ M +P
Sbjct: 106 TIQQMMIP 113


>gi|225020851|ref|ZP_03710043.1| hypothetical protein CORMATOL_00859 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946333|gb|EEG27542.1| hypothetical protein CORMATOL_00859 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 369

 Score = 44.4 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR----QL 176
            G    S  +   F  +   A+  +QM +GL+  G+   +T+ ++N  +  RI     Q 
Sbjct: 90  LGFY--SDRIDGHFGEHTYRALLKYQMNYGLNMDGICGPNTIRSLNR-LGRRITGGSPQK 146

Query: 177 QVNLMRIKKLLEQKMGLRYVL 197
                R++    +  G R V+
Sbjct: 147 LRERERMRAAGPRLTGKRVVI 167



 Score = 39.8 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                FD  +E+A++ FQ   G+  SG ++  TL  +
Sbjct: 19  NADTLFDDELEAALRGFQQARGIIASGEINEMTLRVL 55


>gi|257888642|ref|ZP_05668295.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,141,733]
 gi|257897403|ref|ZP_05677056.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium Com12]
 gi|257824696|gb|EEV51628.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,141,733]
 gi|257833968|gb|EEV60389.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium Com12]
          Length = 425

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 300 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPSTPTP 337


>gi|302874180|ref|YP_003842813.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulovorans 743B]
 gi|307689560|ref|ZP_07632006.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulovorans 743B]
 gi|302577037|gb|ADL51049.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulovorans 743B]
          Length = 454

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 21/137 (15%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWV 245
              +G  YV VN  A  +   +NG + + + V+ G  D    TP+    ++ +       
Sbjct: 328 SNDIGNTYVEVNKAAQHMWFYKNGSLVVDTDVVTGTTDGVHDTPV---GVHYV------- 377

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN-FIFRQDPGK 304
                + K+    + + P Y    +  M       V + +  W S    N + +    G 
Sbjct: 378 -----LYKES-PAILRGPGYAAPVSYWMPLTWDG-VGIHDATWRSAFGGNIYTYDGSHGC 430

Query: 305 IN-AMASTKIEFYSRNN 320
           IN    + +  F + + 
Sbjct: 431 INTPYGAVQTIFENIDA 447


>gi|254038484|ref|ZP_04872540.1| general secretory pathway component [Escherichia sp. 1_1_43]
 gi|226838990|gb|EEH71013.1| general secretory pathway component [Escherichia sp. 1_1_43]
 gi|315617000|gb|EFU97612.1| putative peptidoglycan binding domain protein [Escherichia coli
           3431]
          Length = 478

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 381 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 438

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 439 KTDGVVGFSTLVHL 452


>gi|224825429|ref|ZP_03698534.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
 gi|224602350|gb|EEG08528.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
          Length = 348

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 59/189 (31%), Gaps = 57/189 (30%)

Query: 196 VLVNIPAASLEAV------ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
           V++NIP   L         +  +  +   + + R    TP+  +RI     +P W +P+S
Sbjct: 97  VVLNIPQRRLYYFPATTKGQPPQQVITYPISIAREGWSTPLGATRIKAKFKDPAWFVPKS 156

Query: 250 IIQKDMMALLRQD----PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           I + +    LR+D    P+Y                                    PG  
Sbjct: 157 I-RDE---HLREDGVELPEYF----------------------------------PPGPD 178

Query: 306 NAMASTKIE--FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
           N M    ++  F      ++H T  P          + GC+ +    D      +     
Sbjct: 179 NPMGMLAMQTGFP---GIFIHATNRPWGVGLRT---SHGCLHL-YPEDAAQIFPQMKVGT 231

Query: 364 SRYHIEEVV 372
               I+E V
Sbjct: 232 PVRVIDEPV 240


>gi|121727012|ref|ZP_01680208.1| vgrG protein [Vibrio cholerae V52]
 gi|121630646|gb|EAX63035.1| vgrG protein [Vibrio cholerae V52]
          Length = 1017

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 671 IDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F +  ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V   TL A+
Sbjct: 774 PSHQTHPSYSIG-AVDGIVGKGTLLAL 799


>gi|148653993|ref|YP_001281086.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
 gi|148573077|gb|ABQ95136.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
          Length = 399

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 87/246 (35%), Gaps = 41/246 (16%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
            +   F   V  A+K+FQ +  + P+G +D  T   +     L  + + VN      L  
Sbjct: 158 AVDGRFGENVIKALKVFQEKQAMKPTGQLDPETWAKLTEDPALMSQPVLVN----YTLTP 213

Query: 189 QKM-------GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           + +       G ++  V    A    +  G +  R        D     L +    +++N
Sbjct: 214 EDVTLIKNPKGQQFTTVTEAVAEKFHMSQG-LLWRLN-----PDTP---LEAGNTIVVYN 264

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI---------------DEKGKEVFVEEV 286
           PY   P       ++A+  ++  Y  ++   ++               D   K +   + 
Sbjct: 265 PY--QPNEQEVHRVVAVKAKNLLYAYNDKDELVASYPTTMGSVYKPSPDGDYKVLSRIKD 322

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              + +  N      PG  N +    I   ++ +  +H +P P     + R  +SGCVR+
Sbjct: 323 PSYNKDFKNPNTVLPPGPNNPVGRVWIGI-NKRSYGIHGSPNP---EKISRQNSSGCVRL 378

Query: 347 RNIIDL 352
            N   L
Sbjct: 379 TNWDAL 384


>gi|331674824|ref|ZP_08375581.1| general secretory pathway component, cryptic [Escherichia coli
           TA280]
 gi|331067733|gb|EGI39131.1| general secretory pathway component, cryptic [Escherichia coli
           TA280]
          Length = 489

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +  ++   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPFLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|253771853|ref|YP_003034684.1| peptidoglycan-binding protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163251|ref|YP_003046359.1| general secretory pathway component, cryptic [Escherichia coli B
           str. REL606]
 gi|242378850|emb|CAQ33642.1| gspA [Escherichia coli BL21(DE3)]
 gi|253322897|gb|ACT27499.1| Peptidoglycan-binding domain 1 protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975152|gb|ACT40823.1| general secretory pathway component, cryptic [Escherichia coli B
           str. REL606]
 gi|253979308|gb|ACT44978.1| general secretory pathway component, cryptic [Escherichia coli
           BL21(DE3)]
          Length = 489

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|227552673|ref|ZP_03982722.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX1330]
 gi|293378838|ref|ZP_06624993.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium PC4.1]
 gi|227178202|gb|EEI59174.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX1330]
 gi|292642379|gb|EFF60534.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium PC4.1]
          Length = 465

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 340 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPSTPTP 377


>gi|168044978|ref|XP_001774956.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673703|gb|EDQ60222.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 294

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSGM 156
            LG     +  L+  L+  G +  +         S  FD+  + A++ +Q   GL  +G 
Sbjct: 11  KLGEVRAGMANLKMYLLQFGYISSADAPPAGSSFSEEFDSITQKAIQNYQRSFGLPVTGN 70

Query: 157 VDSSTLEAMNVPVDLRIRQL 176
           +D +TL  M +P   R   +
Sbjct: 71  LDLATLTQMIIPRCGREDVI 90


>gi|293571068|ref|ZP_06682109.1| ErfK/YbiS/YcfS/YnhG family [Enterococcus faecium E980]
 gi|291608851|gb|EFF38132.1| ErfK/YbiS/YcfS/YnhG family [Enterococcus faecium E980]
          Length = 465

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 340 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPSTPTP 377


>gi|257899963|ref|ZP_05679616.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium Com15]
 gi|257837875|gb|EEV62949.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium Com15]
          Length = 465

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 340 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPSTPTP 377


>gi|157162797|ref|YP_001460115.1| putative general secretory pathway protein A [Escherichia coli HS]
 gi|170018441|ref|YP_001723395.1| peptidoglycan binding domain-containing protein [Escherichia coli
           ATCC 8739]
 gi|157068477|gb|ABV07732.1| putative general secretory pathway protein A [Escherichia coli HS]
 gi|169753369|gb|ACA76068.1| Peptidoglycan-binding domain 1 protein [Escherichia coli ATCC 8739]
          Length = 489

 Score = 44.4 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|312898890|ref|ZP_07758278.1| NlpC/P60 family protein [Megasphaera micronuciformis F0359]
 gi|310620052|gb|EFQ03624.1| NlpC/P60 family protein [Megasphaera micronuciformis F0359]
          Length = 249

 Score = 44.1 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L +    +G+    V  +++ L+  G      G+   F      AV+ FQ   GL  SG
Sbjct: 19  TLSVGAYSVGSQGSDVLLIQQNLVKRGY---KIGMDGIFGNDTRRAVERFQADKGLTISG 75

Query: 156 MVDSSTLEAM 165
            VD+ T + +
Sbjct: 76  SVDAKTFKTL 85


>gi|282555158|gb|ADA82676.1| L,D-transpeptidase [endosymbiont of Polyrhachis turneri]
          Length = 311

 Score = 44.1 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 51/168 (30%), Gaps = 56/168 (33%)

Query: 189 QKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILH--SRINRIMFNPYWV 245
                  +++N     L    +N    +   + +G ++  TP  +  + I +   NP W 
Sbjct: 94  PDTPHEGIIINSAEMRLFFYPKNNNTVIIFPIGIGEIEHHTP-FNWITSIQKKKHNPTW- 151

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           IP   I+ + +A                      ++  + V               PG  
Sbjct: 152 IPTQNIKNEYIAR--------------------GDIPPKIV--------------PPGPQ 177

Query: 306 NAMASTKIEFYSRNNTY------MHDTPEPILFNNVVRFETSGCVRVR 347
           N M          +  Y      +H T     F   +R    GCVR++
Sbjct: 178 NPMG--------SHALYIGKLYAIHGTNSN--FGIGLRIX-HGCVRLK 214


>gi|224097706|ref|XP_002311048.1| predicted protein [Populus trichocarpa]
 gi|222850868|gb|EEE88415.1| predicted protein [Populus trichocarpa]
          Length = 259

 Score = 44.1 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 8/67 (11%)

Query: 107 SSVSVQRLRERLIISGDLD--------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           S   +  L+  L   G L          +      FD  +ESA+K +Q  H L+ +G +D
Sbjct: 46  SVKGLHELKRYLEKFGYLKYGHQGKKGHNHANDDEFDDLLESAIKAYQQNHHLNVTGSLD 105

Query: 159 SSTLEAM 165
           +ST+  M
Sbjct: 106 NSTVHEM 112


>gi|311893468|dbj|BAJ25876.1| hypothetical protein KSE_00230t [Kitasatospora setae KM-6054]
 gi|311900994|dbj|BAJ33402.1| hypothetical protein KSE_76510t [Kitasatospora setae KM-6054]
          Length = 267

 Score = 44.1 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 12/72 (16%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV---------DSS 160
            V+ ++ RL+  G       +  ++ A    AV+ FQ  HGL P+G+V          ++
Sbjct: 59  EVKEIQRRLVAHGY---PVTVDGSYGARTLYAVQDFQRDHGLAPTGLVHDFAPTGFDTNT 115

Query: 161 TLEAMNVPVDLR 172
           T  A+  P   +
Sbjct: 116 TFFALLAPPAKK 127


>gi|16131202|ref|NP_417782.1| general secretory pathway component, cryptic [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89110687|ref|AP_004467.1| general secretory pathway component, cryptic [Escherichia coli str.
           K-12 substr. W3110]
 gi|170082842|ref|YP_001732162.1| general secretory pathway component, cryptic [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188496286|ref|ZP_03003556.1| putative general secretory pathway protein A [Escherichia coli
           53638]
 gi|194439974|ref|ZP_03072033.1| putative general secretory pathway protein A [Escherichia coli
           101-1]
 gi|238902414|ref|YP_002928210.1| general secretory pathway component, cryptic [Escherichia coli
           BW2952]
 gi|256025949|ref|ZP_05439814.1| general secretory pathway component, cryptic [Escherichia sp.
           4_1_40B]
 gi|300903571|ref|ZP_07121493.1| hypothetical protein HMPREF9536_01700 [Escherichia coli MS 84-1]
 gi|300918296|ref|ZP_07134900.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300946545|ref|ZP_07160810.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300954738|ref|ZP_07167171.1| hypothetical protein HMPREF9547_00663 [Escherichia coli MS 175-1]
 gi|301021127|ref|ZP_07185167.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|301305532|ref|ZP_07211624.1| hypothetical protein HMPREF9347_04153 [Escherichia coli MS 124-1]
 gi|301643857|ref|ZP_07243888.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|307140006|ref|ZP_07499362.1| general secretory pathway component, cryptic [Escherichia coli
           H736]
 gi|331644019|ref|ZP_08345148.1| general secretory pathway component, cryptic [Escherichia coli
           H736]
 gi|1170044|sp|P45756|GSPA_ECOLI RecName: Full=Probable general secretion pathway protein A
 gi|606257|gb|AAA58120.1| ORF_f489 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789720|gb|AAC76348.1| general secretory pathway component, cryptic [Escherichia coli str.
           K-12 substr. MG1655]
 gi|85676718|dbj|BAE77968.1| general secretory pathway component, cryptic [Escherichia coli str.
           K12 substr. W3110]
 gi|169890677|gb|ACB04384.1| general secretory pathway component, cryptic [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188491485|gb|EDU66588.1| putative general secretory pathway protein A [Escherichia coli
           53638]
 gi|194421082|gb|EDX37110.1| putative general secretory pathway protein A [Escherichia coli
           101-1]
 gi|238861289|gb|ACR63287.1| general secretory pathway component, cryptic [Escherichia coli
           BW2952]
 gi|260447658|gb|ACX38080.1| Peptidoglycan-binding domain 1 protein [Escherichia coli DH1]
 gi|299881657|gb|EFI89868.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|300318289|gb|EFJ68073.1| hypothetical protein HMPREF9547_00663 [Escherichia coli MS 175-1]
 gi|300404444|gb|EFJ87982.1| hypothetical protein HMPREF9536_01700 [Escherichia coli MS 84-1]
 gi|300414557|gb|EFJ97867.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300453791|gb|EFK17411.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300839227|gb|EFK66987.1| hypothetical protein HMPREF9347_04153 [Escherichia coli MS 124-1]
 gi|301077760|gb|EFK92566.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|309703735|emb|CBJ03076.1| general secretory pathway component, GspA [Escherichia coli ETEC
           H10407]
 gi|315137898|dbj|BAJ45057.1| general secretory pathway component, cryptic [Escherichia coli DH1]
 gi|315255906|gb|EFU35874.1| general secretory pathway component, cryptic [Escherichia coli MS
           85-1]
 gi|323959526|gb|EGB55179.1| gspA protein [Escherichia coli H489]
 gi|323970127|gb|EGB65401.1| gspA protein [Escherichia coli TA007]
 gi|331036313|gb|EGI08539.1| general secretory pathway component, cryptic [Escherichia coli
           H736]
          Length = 489

 Score = 44.1 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|262369492|ref|ZP_06062820.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315560|gb|EEY96599.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 416

 Score = 44.1 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 85/277 (30%), Gaps = 65/277 (23%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ   GL  +G +   T +A+      +   ++  +       E  +   Y   +
Sbjct: 167 KAIASFQQMSGLKATGTLTKETWDALLASQGSKPAFIEYTI------TEADLKGPYA-AS 219

Query: 200 IP-AASLEAVENGKVGLRSTV--IVGRVDR----------QTPILHSRINRIMF-NPYWV 245
           IP   +L+A   G     + V  ++G                 I      +I+  N    
Sbjct: 220 IPRDYALQAKMKG--LYYTRVTEMLGEKFHMDEDFLQKLNPKAIFKKAGEKIIVANIRNE 277

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD---------------WNS 290
           +P  I    ++A       YL ++   MI      +   +                 W S
Sbjct: 278 VPEDIHL--IVAHKGAKQLYLFNSRNQMIGSFPATIGSSDTPSPTGTYKVTGVAPNPWYS 335

Query: 291 PEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
             P NF            PG    + +  I   S+ +  +H TP P   +      + GC
Sbjct: 336 YSPSNFVQGKNLKPLSLPPGPNGPVGNIWIGL-SKKSFGIHGTPNPSAISKTA---SHGC 391

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
           +R+ N              W    + + VK+  T   
Sbjct: 392 IRLTN--------------WDANDLGKKVKSGVTVKF 414


>gi|157692794|ref|YP_001487256.1| spore cortex-lytic enzyme [Bacillus pumilus SAFR-032]
 gi|157681552|gb|ABV62696.1| spore cortex-lytic enzyme [Bacillus pumilus SAFR-032]
          Length = 303

 Score = 44.1 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPS 154
               + +  G +   V  L+ RL  +G  +    +   +      AV+ FQ ++G+    
Sbjct: 31  AFTSQVIQRGATGEDVVELQARLQYNGFYNG--KIDGVYGWGTYWAVRNFQSQYGVKKVD 88

Query: 155 GMVDSSTLEAM 165
           G+V   T   +
Sbjct: 89  GLVGKQTKSLL 99


>gi|154687638|ref|YP_001422799.1| YvjB [Bacillus amyloliquefaciens FZB42]
 gi|154353489|gb|ABS75568.1| YvjB [Bacillus amyloliquefaciens FZB42]
          Length = 466

 Score = 44.1 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 23/106 (21%)

Query: 82  IAFYQDILSRGGW-------PELPI--------------RPLHLGNSSVSVQRLRERLII 120
           +  Y+ +  +G W       P + +              +PL    +S  V+  +  L  
Sbjct: 337 LTLYKWLTPKGNWIHKKGIAPTIAVSQPDYFAAGPLQLKQPLQPDMNSADVKHAQILLKG 396

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            G  DP +     F   ++ AV  FQ R+ LD + ++D  T E MN
Sbjct: 397 LGF-DPGRADG-YFSKTMKKAVLAFQDRYKLDKTAVIDKKTAEKMN 440


>gi|229060425|ref|ZP_04197788.1| Spore cortex-lytic enzyme [Bacillus cereus AH603]
 gi|229167426|ref|ZP_04295164.1| Spore cortex-lytic enzyme [Bacillus cereus AH621]
 gi|228615988|gb|EEK73075.1| Spore cortex-lytic enzyme [Bacillus cereus AH621]
 gi|228718808|gb|EEL70429.1| Spore cortex-lytic enzyme [Bacillus cereus AH603]
          Length = 259

 Score = 44.1 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQTRLKYNGFYTG--KVDGVFGWGTYWALRNFQQKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|163940501|ref|YP_001645385.1| spore cortex-lytic enzyme SleB [Bacillus weihenstephanensis KBAB4]
 gi|229012007|ref|ZP_04169186.1| Spore cortex-lytic enzyme [Bacillus mycoides DSM 2048]
 gi|229133643|ref|ZP_04262469.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST196]
 gi|163862698|gb|ABY43757.1| Spore cortex-lytic enzyme SleB [Bacillus weihenstephanensis KBAB4]
 gi|228649678|gb|EEL05687.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST196]
 gi|228749095|gb|EEL98941.1| Spore cortex-lytic enzyme [Bacillus mycoides DSM 2048]
          Length = 259

 Score = 44.1 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQTRLKYNGFYTG--KVDGVFGWGTYWALRNFQQKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|297588474|ref|ZP_06947117.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Finegoldia magna ATCC
           53516]
 gi|297573847|gb|EFH92568.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Finegoldia magna ATCC
           53516]
          Length = 469

 Score = 44.1 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 2/48 (4%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTP 229
           +      +G  Y+ +++ A  L   ++GK+ L + V+ G    D +TP
Sbjct: 334 RSRNNGVLGKSYIEISLGAQHLWYFKDGKLVLDTPVVTGDPSIDHETP 381


>gi|300932216|ref|ZP_07147495.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300460040|gb|EFK23533.1| conserved hypothetical protein [Escherichia coli MS 187-1]
          Length = 489

 Score = 44.1 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|301059160|ref|ZP_07200101.1| peptidoglycan binding domain protein [delta proteobacterium NaphS2]
 gi|300446740|gb|EFK10564.1| peptidoglycan binding domain protein [delta proteobacterium NaphS2]
          Length = 395

 Score = 44.1 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 19/56 (33%), Gaps = 2/56 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             SV+ L+ RL   G    S             A++ FQ  HGL   G      L 
Sbjct: 96  DPSVRELQRRLAKLGYKPGSADGKTG--TKTRKAIRWFQAAHGLTVDGRFSEQLLA 149


>gi|238926893|ref|ZP_04658653.1| NLP/P60 protein [Selenomonas flueggei ATCC 43531]
 gi|238885425|gb|EEQ49063.1| NLP/P60 protein [Selenomonas flueggei ATCC 43531]
          Length = 251

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L+  L  +G   P K +   F+     AV +FQ  + +  +G+V+++
Sbjct: 33  TLCEGSHGHDVLVLQRALQNAGY--PVKNIDGIFNKETGHAVAMFQRDNKIKITGVVNNA 90

Query: 161 TLEAMNVPVDLR 172
           T  A+      R
Sbjct: 91  TWRALRNAPAKR 102


>gi|297516593|ref|ZP_06934979.1| general secretory pathway component, cryptic [Escherichia coli
           OP50]
          Length = 462

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 365 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 422

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 423 KTDGVVGFSTLVHL 436


>gi|332085474|gb|EGI90640.1| putative peptidoglycan binding domain protein [Shigella boydii
           5216-82]
          Length = 466

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 369 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 426

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 427 KTDGVVGFSTLVHL 440


>gi|225427820|ref|XP_002275830.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 287

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+    +Q++++ L   G L  +      S  FD  +ES++K FQ  + L+ +G +D+
Sbjct: 51  KKGDKREGIQKVKQYLQRYGYLSSTHYSQMGSDDFDDALESSLKAFQTFYHLNSTGTLDA 110

Query: 160 STLEAMNVP 168
            T   M+ P
Sbjct: 111 PTATLMSKP 119


>gi|323934479|gb|EGB30887.1| general secretion pathway protein A [Escherichia coli E1520]
          Length = 477

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 380 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 437

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 438 KTDGVVGFSTLVHL 451


>gi|307944914|ref|ZP_07660251.1| N-acetylmuramoyl-L-alanine amidase AmiD [Roseibium sp. TrichSKD4]
 gi|307771838|gb|EFO31062.1| N-acetylmuramoyl-L-alanine amidase AmiD [Roseibium sp. TrichSKD4]
          Length = 254

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 6/74 (8%)

Query: 95  PELPIRPL--HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           PE+  R +    G S   V+ L+  L I G       ++  FDA    AV+ FQ  +  +
Sbjct: 172 PEVTGRGIFMQEGESGQPVEALQSMLAIFGY---RMEVTGQFDATTRLAVEAFQRHYRPE 228

Query: 153 P-SGMVDSSTLEAM 165
              G+VD ST+E +
Sbjct: 229 QVDGIVDQSTIETL 242


>gi|228991584|ref|ZP_04151528.1| Spore cortex-lytic enzyme [Bacillus pseudomycoides DSM 12442]
 gi|228768153|gb|EEM16772.1| Spore cortex-lytic enzyme [Bacillus pseudomycoides DSM 12442]
          Length = 251

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQQKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|228997686|ref|ZP_04157293.1| Spore cortex-lytic enzyme [Bacillus mycoides Rock3-17]
 gi|229009044|ref|ZP_04166383.1| Spore cortex-lytic enzyme [Bacillus mycoides Rock1-4]
 gi|228752214|gb|EEM01903.1| Spore cortex-lytic enzyme [Bacillus mycoides Rock1-4]
 gi|228762030|gb|EEM10969.1| Spore cortex-lytic enzyme [Bacillus mycoides Rock3-17]
          Length = 251

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQQKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|224097718|ref|XP_002311052.1| predicted protein [Populus trichocarpa]
 gi|222850872|gb|EEE88419.1| predicted protein [Populus trichocarpa]
          Length = 309

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 8/67 (11%)

Query: 107 SSVSVQRLRERLIISGDLD--------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           S   +  L+  L   G L          +      FD  +ESA+K +Q  H L+ +G +D
Sbjct: 46  SVKGLHELKRYLEKFGYLKYGHQGKKGHNHANDDEFDDLLESAIKAYQQNHHLNVTGSLD 105

Query: 159 SSTLEAM 165
           +ST+  M
Sbjct: 106 NSTVHEM 112


>gi|331684965|ref|ZP_08385551.1| general secretory pathway component, cryptic [Escherichia coli
           H299]
 gi|331077336|gb|EGI48548.1| general secretory pathway component, cryptic [Escherichia coli
           H299]
          Length = 489

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTLEAM 165
              G+V  STL  +
Sbjct: 450 KTDGVVGFSTLVHL 463


>gi|300118714|ref|ZP_07056440.1| spore cortex-lytic enzyme [Bacillus cereus SJ1]
 gi|298723871|gb|EFI64587.1| spore cortex-lytic enzyme [Bacillus cereus SJ1]
          Length = 157

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|228965691|ref|ZP_04126772.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228794099|gb|EEM41621.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 102

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 18  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 75

Query: 162 LEAM 165
            + +
Sbjct: 76  KQML 79


>gi|289579043|ref|YP_003477670.1| peptidoglycan-binding protein [Thermoanaerobacter italicus Ab9]
 gi|289528756|gb|ADD03108.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter italicus
           Ab9]
          Length = 420

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               R L+ G     V+ L+  L  +G    +  +   F     + V  FQ    L P G
Sbjct: 36  TFGSRLLYSGTYGTDVKELQAMLNKTGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDG 93

Query: 156 MVDSSTLEAM 165
           +V   T   +
Sbjct: 94  IVGPKTYAVL 103


>gi|26249918|ref|NP_755958.1| general secretion pathway protein A [Escherichia coli CFT073]
 gi|227883454|ref|ZP_04001259.1| general secretion pathway protein A [Escherichia coli 83972]
 gi|300979894|ref|ZP_07174770.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|301046094|ref|ZP_07193272.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|26110346|gb|AAN82532.1|AE016767_292 Probable general secretion pathway protein A [Escherichia coli
           CFT073]
 gi|227839598|gb|EEJ50064.1| general secretion pathway protein A [Escherichia coli 83972]
 gi|300301920|gb|EFJ58305.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300409405|gb|EFJ92943.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|307555410|gb|ADN48185.1| export protein A for general secretion pathway [Escherichia coli
           ABU 83972]
 gi|315292360|gb|EFU51712.1| conserved hypothetical protein [Escherichia coli MS 153-1]
          Length = 489

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L  S   S  +   +   +K FQ  H L   G+V  STL  +
Sbjct: 422 LHISTESSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHL 463


>gi|91212760|ref|YP_542746.1| general secretion pathway protein A [Escherichia coli UTI89]
 gi|218560384|ref|YP_002393297.1| general secretory pathway component, cryptic [Escherichia coli S88]
 gi|237703053|ref|ZP_04533534.1| general secretion pathway protein A [Escherichia sp. 3_2_53FAA]
 gi|91074334|gb|ABE09215.1| probable general secretion pathway protein A [Escherichia coli
           UTI89]
 gi|218367153|emb|CAR04927.1| general secretory pathway component, cryptic [Escherichia coli S88]
 gi|226902317|gb|EEH88576.1| general secretion pathway protein A [Escherichia sp. 3_2_53FAA]
 gi|294492719|gb|ADE91475.1| putative general secretory pathway protein A [Escherichia coli
           IHE3034]
 gi|307628358|gb|ADN72662.1| general secretory pathway component, cryptic [Escherichia coli
           UM146]
 gi|315284602|gb|EFU44047.1| conserved hypothetical protein [Escherichia coli MS 110-3]
 gi|323950237|gb|EGB46119.1| general secretion pathway protein A [Escherichia coli H252]
 gi|323954554|gb|EGB50337.1| general secretion pathway protein A [Escherichia coli H263]
          Length = 489

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L  S   S  +   +   +K FQ  H L   G+V  STL  +
Sbjct: 422 LHISTESSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHL 463


>gi|329934357|ref|ZP_08284436.1| hypothetical protein SGM_0148 [Streptomyces griseoaurantiacus M045]
 gi|329305953|gb|EGG49808.1| hypothetical protein SGM_0148 [Streptomyces griseoaurantiacus M045]
          Length = 282

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G++   V    + L+    + P  G+   F      AV+  Q R GL   G V   T +
Sbjct: 221 YGSTGPEVAE-AQCLLRRAGISPG-GIDGIFGPLTRRAVRAMQQRSGLAVDGRVGPHTWK 278

Query: 164 AM 165
           A+
Sbjct: 279 AL 280


>gi|16331313|ref|NP_442041.1| hypothetical protein slr0769 [Synechocystis sp. PCC 6803]
 gi|1001486|dbj|BAA10111.1| slr0769 [Synechocystis sp. PCC 6803]
          Length = 204

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 54/169 (31%), Gaps = 49/169 (28%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            Q +    VLV +    + A +N KV     V VG+   +TP  + ++ +++ NP W  P
Sbjct: 69  SQALATHIVLV-LGERKVYAYQNDKVLASYPVAVGKKGWETPQGNFQVIQMVENPVWENP 127

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                                N   +       + +  + + S               N 
Sbjct: 128 W--------------------NGKKVAASLDGPIGIRWIGFWSDG------------KNT 155

Query: 308 MASTKIEFYSRNNTYMHDTPEPI-LFNNVVRFETSGCVRVRNIIDLDVW 355
           +               H TP+    F       + GCVR+RN   + ++
Sbjct: 156 IG-------------FHGTPKKHEHFLGT--AASHGCVRMRNQDVVALF 189


>gi|205375088|ref|ZP_03227879.1| carboxyl-terminal protease [Bacillus coahuilensis m4-4]
          Length = 156

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    ++  V+  +E L   G           +      AVK FQ + GL  +G +DS
Sbjct: 65  KTLTKEMNNDQVKSAQEMLYSLGY--GPGRTDGYYSNQTAIAVKAFQSKAGLTSTGNIDS 122

Query: 160 STLEAMNVPVDLRIRQ 175
            T  A+   +   I +
Sbjct: 123 QTASALEKTIMKEIEK 138


>gi|332799446|ref|YP_004460945.1| carboxyl-terminal protease [Tepidanaerobacter sp. Re1]
 gi|332697181|gb|AEE91638.1| carboxyl-terminal protease [Tepidanaerobacter sp. Re1]
          Length = 473

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L  GN  + V  +++RL      + +      F    + AVK  Q + GL  +G+V
Sbjct: 375 SQKTLKYGNIGLEVLGIQQRLRFLNLFNTTPDG--VFGPRTQQAVKALQQKAGLPSTGVV 432

Query: 158 DSSTLEAM 165
           D++  +A+
Sbjct: 433 DANFYKAL 440


>gi|268609046|ref|ZP_06142773.1| spore cortex-lytic enzyme, pre-pro-form [Ruminococcus flavefaciens
           FD-1]
          Length = 463

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 11/125 (8%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGLSVA---FDAYVESAVKLFQMRHG 150
           P      L +G++   V+ L+  L  ISG+      +  A   FD    +AV+ FQ   G
Sbjct: 176 PSFGGIDLAVGSAGNDVKSLQVFLNRISGNYPAIPKIPQADGIFDEATAAAVRTFQQVFG 235

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM--RIKKLLE-----QKMGLRYVLVNIPAA 203
           L+ +G+V++ST   +           ++N    R++++        K+G++ + V++   
Sbjct: 236 LETTGIVNASTWYRITYIYTSVKHIAELNSEGVRLEEISPVFTEDLKIGMQSIEVSVLQY 295

Query: 204 SLEAV 208
            L  +
Sbjct: 296 YLAVI 300



 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLD 152
            +    L +G  S+ V  L+  L + G    +     ++  F    E +VK FQ   GL 
Sbjct: 275 PVFTEDLKIGMQSIEVSVLQYYLAVIGAYYEAVTPVEITGYFGEKTELSVKSFQRVFGLP 334

Query: 153 PSGMVDSSTLEAM 165
            +G VD +T   +
Sbjct: 335 QTGEVDRATRNDL 347



 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 13/121 (10%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKA-----IAFYQDILSR--GGWPEL---PIRPLHL 104
           F  + ++ + S   +       + ++A        YQ I       +  +   P   L  
Sbjct: 316 FGEKTELSVKSFQRVFGLPQTGEVDRATRNDLYRAYQGIAEAVPPQYTAVALYPGTVLRE 375

Query: 105 GNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G S  SV+ ++E L  I+      PS   +  F    + +V  FQ + G+D +G+V + T
Sbjct: 376 GVSGSSVRIIQEYLTYINRSYPNIPSVSNTGYFGPLTKQSVMAFQRQFGIDQTGIVGAVT 435

Query: 162 L 162
            
Sbjct: 436 W 436


>gi|194435137|ref|ZP_03067372.1| probable general secretion pathway protein A [Shigella dysenteriae
           1012]
 gi|194416634|gb|EDX32768.1| probable general secretion pathway protein A [Shigella dysenteriae
           1012]
 gi|332085960|gb|EGI91124.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           155-74]
          Length = 406

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L  S   S  +   +   +K FQ  H L   G+V  STL  +
Sbjct: 339 LHISTEPSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHL 380


>gi|166030996|ref|ZP_02233825.1| hypothetical protein DORFOR_00677 [Dorea formicigenerans ATCC
           27755]
 gi|166029263|gb|EDR48020.1| hypothetical protein DORFOR_00677 [Dorea formicigenerans ATCC
           27755]
          Length = 419

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G++   V++++E+L++  D  P+         F    E+AV+ FQ+  GL  +
Sbjct: 335 PGYDLSIGSTGDKVRQMQEQLLVISDAYPAIPKIDADGIFGPATEAAVRKFQLIFGLPVT 394

Query: 155 GMVDSSTLE 163
           G+VD  T  
Sbjct: 395 GIVDYKTWY 403


>gi|229541523|ref|ZP_04430583.1| carboxyl-terminal protease [Bacillus coagulans 36D1]
 gi|229325943|gb|EEN91618.1| carboxyl-terminal protease [Bacillus coagulans 36D1]
          Length = 478

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L    ++  ++  ++ L   G     +     FD   E+AVK FQ   GL  +G ++
Sbjct: 388 SRMLKKDMNNTQIKTAQQMLKSLGFSPGREDG--YFDIQTENAVKAFQFDKGLPVTGSIN 445

Query: 159 SSTLEAM 165
             T + M
Sbjct: 446 QKTADEM 452


>gi|227823392|ref|YP_002827365.1| putative peptidoglycan-binding protein [Sinorhizobium fredii
           NGR234]
 gi|227342394|gb|ACP26612.1| putative peptidoglycan-binding protein [Sinorhizobium fredii
           NGR234]
          Length = 405

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 9/88 (10%)

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
               I+ Y  +  R  WP  P   L +         L+ RL   G  D     +  F + 
Sbjct: 325 LADQISGYAGMQQR--WPR-PDGSLDISEKF----ELQNRLKELGYYDGEVDGN--FGSG 375

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            ++A++ FQ ++GL P G    + L A+
Sbjct: 376 SKAAIQAFQTQNGLTPDGEPTQNLLRAL 403


>gi|253564757|ref|ZP_04842213.1| peptidoglycan-binding domain 1 protein [Bacteroides sp. 3_2_5]
 gi|251946222|gb|EES86599.1| peptidoglycan-binding domain 1 protein [Bacteroides sp. 3_2_5]
          Length = 264

 Score = 44.1 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ + LG        L   L  +G    S   S  F   ++ +V  FQ +  LD  G+V 
Sbjct: 1   MKTIKLGYEGEEALLLCRELKRNGY---SVKESRTFTQEMKESVVDFQQKSQLDADGIVG 57

Query: 159 SSTLEAM---NVPVDLRI 173
             T E++     P   R+
Sbjct: 58  YRTWESLFFTGRPTTERL 75


>gi|189425359|ref|YP_001952536.1| peptidoglycan-binding protein [Geobacter lovleyi SZ]
 gi|189421618|gb|ACD96016.1| Peptidoglycan-binding domain 1 protein [Geobacter lovleyi SZ]
          Length = 532

 Score = 44.1 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV-PVDL 171
            L   L+ +G   P++ +    +  V  A+K FQ   GL+ +G+    TL  +N    D 
Sbjct: 462 LLARLLVSAGAWPPNQPVIT--EGAVREALKTFQQSQGLEAAGVAGGQTLLLLNRQTPDF 519

Query: 172 RIRQLQVNLMR 182
           ++  L+    R
Sbjct: 520 KVPVLKK-AER 529


>gi|323488226|ref|ZP_08093476.1| putative spore cortex-lytic enzyme precursor [Planococcus
           donghaensis MPA1U2]
 gi|323398084|gb|EGA90880.1| putative spore cortex-lytic enzyme precursor [Planococcus
           donghaensis MPA1U2]
          Length = 207

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH+G S   V+ L+ +L   G    S   +  +    ++AV  FQ    +  +G     T
Sbjct: 31  LHVGVSGEGVKELQIKLKKLGYFSTSA--TGYYGPVTKNAVIEFQRDFNVSATGFTGPLT 88

Query: 162 LEAM 165
              +
Sbjct: 89  RARL 92


>gi|169333708|ref|ZP_02860901.1| hypothetical protein ANASTE_00092 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259557|gb|EDS73523.1| hypothetical protein ANASTE_00092 [Anaerofustis stercorihominis DSM
           17244]
          Length = 242

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 96  ELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +   PL   G+    V++ + +L   G       +   F +   SAVK FQ ++ L   
Sbjct: 172 PVSEYPLIRKGSKGSYVKKAQTQLNKKGGYK--LKVDGIFGSATLSAVKKFQKKNKLVVD 229

Query: 155 GMVDSSTLEAM 165
           G+V + T   +
Sbjct: 230 GIVGAKTWSKL 240


>gi|291451766|ref|ZP_06591156.1| predicted protein [Streptomyces albus J1074]
 gi|291354715|gb|EFE81617.1| predicted protein [Streptomyces albus J1074]
          Length = 301

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   +   V+ AV+ FQ    +   G+V   T   +
Sbjct: 263 AVDGLYGPVVQEAVRRFQAARRIPVDGVVGPDTWGEL 299


>gi|288960163|ref|YP_003450503.1| hypothetical protein AZL_a04280 [Azospirillum sp. B510]
 gi|288912471|dbj|BAI73959.1| hypothetical protein AZL_a04280 [Azospirillum sp. B510]
          Length = 257

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 9/64 (14%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFD----AYVESAVKLFQMRHGLDPSGMVDSSTL 162
           S   V+ +++ L      D + G  +A D    A    A+  FQ  +GL  +G  D  T+
Sbjct: 143 SHEQVREIQQALN-----DRTDGRDIAVDGVWGAGTRRALMRFQRDNGLRATGRADQQTM 197

Query: 163 EAMN 166
            A+N
Sbjct: 198 AALN 201


>gi|224097714|ref|XP_002311050.1| predicted protein [Populus trichocarpa]
 gi|222850870|gb|EEE88417.1| predicted protein [Populus trichocarpa]
          Length = 309

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 8/67 (11%)

Query: 107 SSVSVQRLRERLIISGDLD--------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           S   +  L+  L   G L          +      FD  +ESA+K +Q  H L+ +G +D
Sbjct: 46  SVKGLHELKRYLEKFGYLKYGHQGKKGHNHANDDEFDDLLESAIKAYQQNHHLNVTGSLD 105

Query: 159 SSTLEAM 165
           +ST+  M
Sbjct: 106 NSTVHEM 112


>gi|124266224|ref|YP_001020228.1| general secretion pathway protein A [Methylibium petroleiphilum
           PM1]
 gi|124258999|gb|ABM93993.1| general secretion pathway protein A [Methylibium petroleiphilum
           PM1]
          Length = 563

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 5/55 (9%)

Query: 114 LRERLI-ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           L  RL   +GD  P +  + A    +      FQ   GL P G+    TL  +N 
Sbjct: 501 LAARLATAAGDAAPGETSAAALKPRIA----AFQSTQGLAPDGLAGPITLMQLNR 551


>gi|291539241|emb|CBL12352.1| Putative peptidoglycan-binding domain-containing protein [Roseburia
           intestinalis XB6B4]
          Length = 419

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLI-ISGDLD--PSKGLSVAFDAYVESAVKLFQMRHG 150
           WP +    L +G++   V++++E L  IS      P+      +      AV++FQ   G
Sbjct: 334 WPRVD---LTIGSTGEKVRQIQEELARISRSYPAIPTVTPDGIYGPATREAVEVFQRVFG 390

Query: 151 LDPSGMVDSSTLE 163
           L  +G++D  T  
Sbjct: 391 LPVTGVIDYRTWY 403


>gi|289644092|ref|ZP_06476188.1| Peptidoglycan-binding domain 1 protein [Frankia symbiont of Datisca
           glomerata]
 gi|289506092|gb|EFD27095.1| Peptidoglycan-binding domain 1 protein [Frankia symbiont of Datisca
           glomerata]
          Length = 146

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 13/86 (15%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   VQ ++  L   G    S  +   F    E+AV+ FQ   G+   G V   +  A
Sbjct: 11  GSSGEPVQTIQYLLRAHGY---SVTVDGVFGPATEAAVRAFQSSAGIVVDGAVGDQSWPA 67

Query: 165 MNVPV----------DLRIRQLQVNL 180
           + + V           +R  Q Q N 
Sbjct: 68  LIITVRDGDRSEKGDAVRAVQDQANA 93



 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 11/79 (13%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE-------RLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           WP L I  +  G+ S     +R        R+   G+  P  G    F    ++ V+ FQ
Sbjct: 65  WPAL-IITVRDGDRSEKGDAVRAVQDQANARISDPGNFLPVDG---VFGRRTDAWVRGFQ 120

Query: 147 MRHGLDPSGMVDSSTLEAM 165
              G+   G+V  +T   +
Sbjct: 121 QHAGITVDGIVGPTTWNRL 139


>gi|291486076|dbj|BAI87151.1| hypothetical protein BSNT_05362 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 480

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 23/112 (20%)

Query: 82  IAFYQDILSRGGW-------PELPIR--------------PLHLGNSSVSVQRLRERLII 120
           +  Y+ +   G W       P + I+              PL +  ++  V+   + L+ 
Sbjct: 351 LTLYKWLTPNGNWIHKKGIEPTIAIKQPDYFSAGPLQLKEPLKVDMNNEDVKH-AQVLLK 409

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
               DP +     F   ++ AV  FQ ++ L+ +G++D+ T E +N  ++ +
Sbjct: 410 GLSFDPGREDG-YFSKDMKKAVMAFQDQNKLNKTGVIDTRTAETLNRQIEKK 460


>gi|226357324|ref|YP_002787064.1| hypothetical protein Deide_22781 [Deinococcus deserti VCD115]
 gi|226319314|gb|ACO47310.1| Conserved hypothetical protein, precursor [Deinococcus deserti
           VCD115]
          Length = 295

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 1/67 (1%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   ++  + RLI   +          +     + V+ FQ  + L  +G +D +T  A+
Sbjct: 222 MNGSDIRAAQNRLIQLTEDSRGGQGDGWYGPVTAATVRAFQAANNLPVTGRIDQATWRAL 281

Query: 166 NVPVDLR 172
                 R
Sbjct: 282 -FSPAAR 287


>gi|90418710|ref|ZP_01226621.1| conserved hypothetical protein with putative peptidoglycan-binding
            domain [Aurantimonas manganoxydans SI85-9A1]
 gi|90336790|gb|EAS50495.1| conserved hypothetical protein with putative peptidoglycan-binding
            domain [Aurantimonas manganoxydans SI85-9A1]
          Length = 1306

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +++ ++  LI  G    +    V       +A+K FQ   GL   G +D + + A+
Sbjct: 1247 AIRNIQAILIKLGYEPGAPDGVVG--QQTTAAIKAFQKEAGLTADGSIDETLIRAL 1300


>gi|153830422|ref|ZP_01983089.1| VgrG protein [Vibrio cholerae 623-39]
 gi|148874096|gb|EDL72231.1| VgrG protein [Vibrio cholerae 623-39]
          Length = 1037

 Score = 43.7 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  I+  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 671 IDVASLPTIMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F    ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGGKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V + TL A+
Sbjct: 774 PSHQTHPSYSIG-PVDGIVGNGTLLAL 799


>gi|257413209|ref|ZP_04742330.2| spore cortex-lytic enzyme SleC [Roseburia intestinalis L1-82]
 gi|257204288|gb|EEV02573.1| spore cortex-lytic enzyme SleC [Roseburia intestinalis L1-82]
          Length = 427

 Score = 43.7 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLI-ISGDLD--PSKGLSVAFDAYVESAVKLFQMRHG 150
           WP +    L +G++   V++++E L  IS      P+      +      AV++FQ   G
Sbjct: 342 WPRVD---LTIGSTGEKVRQIQEELARISRSYPAIPTVTPDGIYGPATREAVEVFQRVFG 398

Query: 151 LDPSGMVDSSTLE 163
           L  +G++D  T  
Sbjct: 399 LPVTGVIDYRTWY 411


>gi|239979911|ref|ZP_04702435.1| hypothetical protein SalbJ_10752 [Streptomyces albus J1074]
          Length = 270

 Score = 43.7 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   +   V+ AV+ FQ    +   G+V   T   +
Sbjct: 232 AVDGLYGPVVQEAVRRFQAARRIPVDGVVGPDTWGEL 268


>gi|86747744|ref|YP_484240.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris HaA2]
 gi|86570772|gb|ABD05329.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris HaA2]
          Length = 460

 Score = 43.7 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           Q ++  L  +GD +       +    + +A+K FQ  HG   +G+++      +      
Sbjct: 62  QAIQSDLAWTGDYNGVINGEPS--ERMVTAIKAFQKNHGGKQTGVLNPQERAQL----TE 115

Query: 172 RIRQLQVN 179
             R+LQ N
Sbjct: 116 AARKLQGN 123


>gi|291537294|emb|CBL10406.1| Putative peptidoglycan-binding domain-containing protein [Roseburia
           intestinalis M50/1]
          Length = 419

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLI-ISGDLD--PSKGLSVAFDAYVESAVKLFQMRHG 150
           WP +    L +G++   V++++E L  IS      P+      +      AV++FQ   G
Sbjct: 334 WPRVD---LTIGSTGEKVRQIQEELARISRSYPAIPTVTPDGIYGPATREAVEVFQRVFG 390

Query: 151 LDPSGMVDSSTLE 163
           L  +G++D  T  
Sbjct: 391 LPVTGVIDYRTWY 403


>gi|226940770|ref|YP_002795844.1| ErfK/YbiS/YcfS/YnhG family protein [Laribacter hongkongensis HLHK9]
 gi|226715697|gb|ACO74835.1| ErfK/YbiS/YcfS/YnhG family protein [Laribacter hongkongensis HLHK9]
          Length = 235

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 55/192 (28%), Gaps = 71/192 (36%)

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +PRSI Q+                    +   GK V                   
Sbjct: 9   NPAWHVPRSIQQE--------------------MARAGKTVQTVV--------------- 33

Query: 301 DPGKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLL 357
            PG  N +    I F        MH T  P    +V  F + GCVR+   + +DL     
Sbjct: 34  PPGPQNPLGKVFIRFGEPGLGLGMHGTNAPG---SVPGFRSHGCVRLRNEDALDLAS--- 87

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLD 413
                                  ++   VPV  +Y S    +D+     +    D YG  
Sbjct: 88  -----------------------RVRYGVPVSVIYQSVLLNQDARGDVWMTAFADRYGKT 124

Query: 414 NVHVGIIPLPED 425
             +   I    +
Sbjct: 125 TANAAQIRTAAE 136


>gi|210631829|ref|ZP_03297071.1| hypothetical protein COLSTE_00961 [Collinsella stercoris DSM 13279]
 gi|210159949|gb|EEA90920.1| hypothetical protein COLSTE_00961 [Collinsella stercoris DSM 13279]
          Length = 302

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 27/84 (32%), Gaps = 12/84 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W  L      LG+              VQ L+  L   G           F  + E+A++
Sbjct: 65  WSALVDASYKLGDRTLYLRLPNFHGADVQALQRALNTLGFACGVDDG--FFGPHTEAALQ 122

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ   GL   GM    T   +N 
Sbjct: 123 QFQENVGLFADGMAFQDTFAYINR 146



 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           +  +  G    +V+ ++ RL   G  +D ++  +  F     +AV+ F+   GL+P   V
Sbjct: 1   MESIAQGMQGPAVEDVQTRLTSLGYTIDEAETSAKEFGTTSAAAVRAFRASQGLEPGDEV 60

Query: 158 DSSTLEAM 165
           D +   A+
Sbjct: 61  DGAAWSAL 68


>gi|253701653|ref|YP_003022842.1| peptidoglycan-binding protein [Geobacter sp. M21]
 gi|251776503|gb|ACT19084.1| Peptidoglycan-binding domain 1 protein [Geobacter sp. M21]
          Length = 536

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G     V+ L+  L   G  D +  ++  F    ++AV  FQ R  L   G +   TL
Sbjct: 454 KAGEKEAGVRLLQGLLKQVGCYDGA--VNGEFTDKTQAAVAEFQRREQLTADGKLGGQTL 511

Query: 163 EAM 165
             +
Sbjct: 512 MML 514


>gi|41057064|ref|NP_957546.1| hypothetical protein pCD6_p4 [Clostridium difficile]
 gi|38196035|gb|AAR13708.1| unknown [Clostridium difficile]
          Length = 186

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             GNS   V  ++  L   G    +  +   F     S VK FQ  +GL   G+V S+T 
Sbjct: 120 KYGNSGNPVHLVQLLLKKVGY---ALEVDSQFGNTTLSKVKSFQGSYGLTVDGIVGSATW 176

Query: 163 E 163
           +
Sbjct: 177 K 177


>gi|256378112|ref|YP_003101772.1| peptidoglycan-binding domain 1 protein [Actinosynnema mirum DSM
           43827]
 gi|255922415|gb|ACU37926.1| Peptidoglycan-binding domain 1 protein [Actinosynnema mirum DSM
           43827]
          Length = 358

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 3/70 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G     V  + + L   G    + P       F   V  A+K +Q + GL  +G V+ 
Sbjct: 124 EPGVKGSDVAVVMDNLAALGYTVGIRPDDDSKAEFTPRVVEALKKWQRKVGLPDTGKVEP 183

Query: 160 STLEAMNVPV 169
             +  +  PV
Sbjct: 184 GQVLVLAGPV 193


>gi|307153693|ref|YP_003889077.1| peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7822]
 gi|306983921|gb|ADN15802.1| Peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7822]
          Length = 479

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDP-----SKGLSVAFDAYVESAVKLFQMRHGLDP-SG 155
           L  G++  +V+++++ LI      P     +      + A     VK FQ    L    G
Sbjct: 109 LRNGSTGEAVKKIQQALIDLKYPMPISTQKTGEPDGIYGAETSKTVKQFQTDQALKDKDG 168

Query: 156 MVDSSTLEAM 165
           +V   T+E +
Sbjct: 169 IVGKDTIEKL 178


>gi|114704710|ref|ZP_01437618.1| TPR repeat [Fulvimarina pelagi HTCC2506]
 gi|114539495|gb|EAU42615.1| TPR repeat [Fulvimarina pelagi HTCC2506]
          Length = 516

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 10/56 (17%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYV----ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L+ RL  +GD +        FD  +      A++ FQ RHG++PSG++    L  +
Sbjct: 49  LQIRLAWTGDYEGE------FDGIIGPRSLRAIRDFQARHGMEPSGIISDDMLAQL 98


>gi|90423688|ref|YP_532058.1| negative regulator of AmpC, AmpD [Rhodopseudomonas palustris
           BisB18]
 gi|90105702|gb|ABD87739.1| negative regulator of AmpC, AmpD [Rhodopseudomonas palustris
           BisB18]
          Length = 289

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 8/88 (9%)

Query: 90  SRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + G W    P +    L LG     V  L+  L   G        +  +D      V  F
Sbjct: 193 AVGHWVPPAPIVRSEVLKLGADGDEVMALQRALADYGY---GLTPNGCYDPATADVVTAF 249

Query: 146 QMRHGLD-PSGMVDSSTLEAMNVPVDLR 172
           Q         G+ D+STL  +++ ++ R
Sbjct: 250 QRHFRPQRVDGIADASTLTTLHMLLESR 277


>gi|313887561|ref|ZP_07821244.1| ErfK/YbiS/YcfS/YnhG [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846439|gb|EFR33817.1| ErfK/YbiS/YcfS/YnhG [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 270

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 10/103 (9%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           +K +Q R  L  +G +++ T +A+             N      +        +++VN  
Sbjct: 44  LKKWQARMNLPVTGGMNAKTKQALYTE----------NYEVYDMVTNPPTSGNWIVVNKS 93

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
             +L   + G+   +  V +G     TP   +RI+ +  NP W
Sbjct: 94  RRTLTLYKGGQALGKFPVTLGTGSTPTPSAKARIHNMHKNPAW 136


>gi|262173037|ref|ZP_06040714.1| VgrG protein [Vibrio mimicus MB-451]
 gi|261890395|gb|EEY36382.1| VgrG protein [Vibrio mimicus MB-451]
          Length = 991

 Score = 43.7 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 13/79 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH--------- 149
                 GN+S  V+ L++ LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNNSEEVRLLQKALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 150 ---GLDPSGMVDSSTLEAM 165
              G    G+V   TL A+
Sbjct: 782 YSIG-PVDGIVGKGTLLAL 799


>gi|149181804|ref|ZP_01860294.1| carboxyl-terminal processing protease [Bacillus sp. SG-1]
 gi|148850443|gb|EDL64603.1| carboxyl-terminal processing protease [Bacillus sp. SG-1]
          Length = 480

 Score = 43.7 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +PL    ++  V+  ++ L   G       +   F+   E+AV+ FQ +H L  +G +D+
Sbjct: 389 KPLAREMNNEQVKNAQQMLEGLGY--NPGRIDGYFNQATEAAVRSFQQKHELAATGKIDT 446

Query: 160 STLEAM 165
            T   +
Sbjct: 447 DTASKL 452


>gi|119511038|ref|ZP_01630158.1| hypothetical protein N9414_09846 [Nodularia spumigena CCY9414]
 gi|119464289|gb|EAW45206.1| hypothetical protein N9414_09846 [Nodularia spumigena CCY9414]
          Length = 253

 Score = 43.7 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 5/66 (7%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           R  L   G  D     +   D     A++ FQ  + L   G+    T +         ++
Sbjct: 33  RAVLRGLGY-DVKVTNTTLTDEETRKAIREFQRGYKLTVDGVAGPQTQDF----AATIVQ 87

Query: 175 QLQVNL 180
            LQ NL
Sbjct: 88  ILQANL 93


>gi|75909734|ref|YP_324030.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75703459|gb|ABA23135.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 389

 Score = 43.7 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 3/79 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           L  G+    VQ L+ +L   G           +    + AV  FQ         G+ D +
Sbjct: 52  LKPGSQGPDVQTLQMQLKQLGYYSG--ITDGKYGDSTKQAVAKFQQAKVFSRVDGVADLA 109

Query: 161 TLEAMNVPVDLRIRQLQVN 179
           T   +   +     +L V 
Sbjct: 110 TKRVLQTALIDNQNKLAVA 128


>gi|309811332|ref|ZP_07705119.1| peptidoglycan binding domain protein [Dermacoccus sp. Ellin185]
 gi|308434639|gb|EFP58484.1| peptidoglycan binding domain protein [Dermacoccus sp. Ellin185]
          Length = 54

 Score = 43.7 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 14/36 (38%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               F     +AV  FQ  H L   G+   +T  A+
Sbjct: 12  ADGVFGPQTRAAVVRFQRAHHLGVDGVAGRATFRAL 47


>gi|154684734|ref|YP_001419895.1| YbfG [Bacillus amyloliquefaciens FZB42]
 gi|154350585|gb|ABS72664.1| YbfG [Bacillus amyloliquefaciens FZB42]
          Length = 724

 Score = 43.7 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEA-MNVPV-------DLRIRQLQVN 179
           G S  F    ESAVK FQ   GL    G+V +  ++A +++         D RIRQ+Q N
Sbjct: 96  GFSGVFYENTESAVKEFQKAAGLTKQDGIVTALIMKALLDMSAFRLVAGGDKRIRQIQQN 155

Query: 180 LMR 182
           L R
Sbjct: 156 LNR 158



 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 101 PLHLGNSSVSVQRLRE-RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            L  G+S      + +  L  +G+          +   V SAVK FQ    L  +G  D 
Sbjct: 210 TLTPGDSRTGFVLIVQYALYCNGEAFDPGEFDGKYGVGVVSAVKAFQKFMCLPQTGYADM 269

Query: 160 STLEAM 165
            T++A+
Sbjct: 270 PTIKAL 275


>gi|30249163|ref|NP_841233.1| peptidoglycan binding domain-containing protein [Nitrosomonas
           europaea ATCC 19718]
 gi|30180482|emb|CAD85087.1| Putative peptidoglycan binding domain 1 [Nitrosomonas europaea ATCC
           19718]
          Length = 262

 Score = 43.7 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH G+    V  L+E LI  G    S  +  +F A  E AV  FQ  + L+ +G+V+ +T
Sbjct: 200 LHRGSFGAGVAELQELLINKGF---SLSIDSSFGAATELAVMTFQKANSLEANGIVERNT 256

Query: 162 LEAM 165
              +
Sbjct: 257 WTRL 260


>gi|315640706|ref|ZP_07895808.1| S41A carboxy-terminal processing protease [Enterococcus italicus
           DSM 15952]
 gi|315483461|gb|EFU73955.1| S41A carboxy-terminal processing protease [Enterococcus italicus
           DSM 15952]
          Length = 475

 Score = 43.7 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG  S +V+ L   L   G     K     +    ++AVK  Q +  L  +G+VD  T E
Sbjct: 393 LGLESSNVKSLNTYLAGLGY----KTSGDKYTEETQAAVKDIQKKKQLTVTGIVDKKTAE 448

Query: 164 AMNVPVDLRIRQLQVN 179
           A+         QL+ N
Sbjct: 449 AI---SQAAADQLKTN 461


>gi|300715947|ref|YP_003740750.1| conserved uncharacterized protein YbiS [Erwinia billingiae Eb661]
 gi|299061783|emb|CAX58899.1| Putative conserved uncharacterized protein YbiS [Erwinia billingiae
           Eb661]
          Length = 433

 Score = 43.7 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 55/181 (30%), Gaps = 42/181 (23%)

Query: 189 QKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                  +++N     L     G K  +   V VG + + TPI             W   
Sbjct: 94  PDAPREGIVINSAEMRLYYYPKGTKTVVVLPVGVGELGKDTPI------------NWT-- 139

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            ++ +K      +  P +     +H           + V   SP P  F      G  N 
Sbjct: 140 TTVQRK------KDGPTWTPTKKMHE----------DSVAAGSPLPTIFP----AGPDNP 179

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           M    +          H T     F   +R  + GCVR+    D+  WL  + P  +R  
Sbjct: 180 MGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRL-RADDI-KWLFDNVPVGTRVQ 232

Query: 368 I 368
            
Sbjct: 233 F 233


>gi|225575215|ref|ZP_03783825.1| hypothetical protein RUMHYD_03304 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037508|gb|EEG47754.1| hypothetical protein RUMHYD_03304 [Blautia hydrogenotrophica DSM
           10507]
          Length = 619

 Score = 43.7 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+  ++ LI  G      G    F    + A + FQ  +GL   G    +T
Sbjct: 390 LCEGDQGEAVRVYQKNLISIGYDCGKNGADGDFGPATKEATQEFQGDYGLVQDGNAGPAT 449

Query: 162 LEAM 165
              +
Sbjct: 450 QAKL 453


>gi|225018050|ref|ZP_03707242.1| hypothetical protein CLOSTMETH_01986 [Clostridium methylpentosum
           DSM 5476]
 gi|224949196|gb|EEG30405.1| hypothetical protein CLOSTMETH_01986 [Clostridium methylpentosum
           DSM 5476]
          Length = 456

 Score = 43.7 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS---KGLSVAFDAYVESAVKLFQMRHGL 151
            +P  P L  G S V V+ ++  L +     P      +   F      AV+ FQ    +
Sbjct: 275 TVPYPPTLQEGMSGVEVRTIQYYLSVLSYFYPEIPFVQIDGIFGPATREAVQAFQRMVNI 334

Query: 152 DPSGMVDSSTLEAM 165
              G+V + T   +
Sbjct: 335 PSDGIVGAQTWNNL 348



 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G S   V  L+  L + G      P   ++  F      AV+ FQ   GL  +G V 
Sbjct: 376 LTEGASGEDVTNLQTYLALIGRTYTNLPEIPVTGNFGPQTAEAVRAFQRDFGLPVTGSVG 435

Query: 159 SSTLE 163
             T +
Sbjct: 436 PVTWQ 440



 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD----LDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P   L +G +   V+ ++ +L    +    +         F      +V+ FQ    L  
Sbjct: 180 PGVALRVGMAGNDVKTIQTQLNRIANNYPSIPKIPSTDGIFGESTARSVREFQRIFNLTQ 239

Query: 154 SGMVDSSTLE 163
            G+V  ST  
Sbjct: 240 DGIVGKSTWY 249


>gi|119714782|ref|YP_921747.1| peptidoglycan binding domain-containing protein [Nocardioides sp.
           JS614]
 gi|119535443|gb|ABL80060.1| Peptidoglycan-binding domain 1 protein [Nocardioides sp. JS614]
          Length = 309

 Score = 43.7 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 95  PELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P L   P  L  G+    V+ L+ RL        +  ++  +     +AV+ FQ +  + 
Sbjct: 95  PTLVPGPRLLGPGDQGDEVRDLQARLKQI--YWFNTDVTGVYGDVTATAVRGFQAKREIP 152

Query: 153 PSGMVDSSTLEAM 165
            +G VD  TL+ +
Sbjct: 153 VTGEVDQRTLDRL 165


>gi|332974764|gb|EGK11680.1| spore cortex-lytic enzyme [Desmospora sp. 8437]
          Length = 234

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           H G+ +  V  L+ RL   G           +    E  V  FQ  H L   G+  + T 
Sbjct: 36  HYGSKNGDVWDLQARLNKLGY---KTKRDGVYGLQTERQVIQFQKDHKLRIDGISGAQTW 92

Query: 163 EAM 165
             +
Sbjct: 93  GEL 95


>gi|89099115|ref|ZP_01171994.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. NRRL B-14911]
 gi|89086245|gb|EAR65367.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. NRRL B-14911]
          Length = 285

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL   G  +    +   F      A++ FQ   GL   G
Sbjct: 32  AFSAQVIQHGAVGDDVIELQSRLQYLGFYNG--KIDGVFGWGTYWALRNFQYEFGLPIDG 89

Query: 156 MVDSSTLEAM 165
           +    T   +
Sbjct: 90  LAGQETKAKL 99


>gi|196041668|ref|ZP_03108959.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus NVH0597-99]
 gi|196027437|gb|EDX66053.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus NVH0597-99]
          Length = 253

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|206971930|ref|ZP_03232879.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH1134]
 gi|206733315|gb|EDZ50488.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH1134]
          Length = 259

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|163790212|ref|ZP_02184645.1| phiSLT ORF484-like protein, lysin [Carnobacterium sp. AT7]
 gi|159874487|gb|EDP68558.1| phiSLT ORF484-like protein, lysin [Carnobacterium sp. AT7]
          Length = 337

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 14/40 (35%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              G+   +      AV+ FQ  +GL   G     T   +
Sbjct: 292 EKNGVDGWYGPLTVDAVERFQSVYGLTVDGTFGPKTRAKL 331


>gi|228953081|ref|ZP_04115141.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|112380305|gb|ABI16957.1| SleB [Bacillus thuringiensis serovar kurstaki]
 gi|228806587|gb|EEM53146.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 259

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|15966561|ref|NP_386914.1| putative membrane-bound lytic murein transglycosylase protein
           [Sinorhizobium meliloti 1021]
 gi|307300402|ref|ZP_07580182.1| lytic murein transglycosylase [Sinorhizobium meliloti BL225C]
 gi|307318267|ref|ZP_07597702.1| lytic murein transglycosylase [Sinorhizobium meliloti AK83]
 gi|15075832|emb|CAC47387.1| Membrane-bound lytic murein transglycosylase precursor
           [Sinorhizobium meliloti 1021]
 gi|306895949|gb|EFN26700.1| lytic murein transglycosylase [Sinorhizobium meliloti AK83]
 gi|306904568|gb|EFN35152.1| lytic murein transglycosylase [Sinorhizobium meliloti BL225C]
          Length = 405

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 9/88 (10%)

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
               IA Y  +  R  WP  P   L +         L+ RL   G  D     +  F + 
Sbjct: 325 LADQIAGYAGMQQR--WPR-PDGSLDISEKF----ELQNRLKELGYYDGEVDGN--FGSG 375

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            ++A++ FQ ++GL P G      L A+
Sbjct: 376 SKAAIQAFQNQNGLAPDGEPTQHLLRAL 403


>gi|94986332|ref|YP_605696.1| peptidoglycan binding domain-containing protein [Deinococcus
           geothermalis DSM 11300]
 gi|94556613|gb|ABF46527.1| Peptidoglycan-binding domain 1 [Deinococcus geothermalis DSM 11300]
          Length = 251

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
               +   V+ ++ RLI              +     + V+ FQ  + L  +G VD +T 
Sbjct: 175 TPRMNGADVRAVQNRLIALTRPSSGGQGDGWYGPVTAATVRAFQAANALPVTGRVDRATW 234

Query: 163 EAM 165
            A+
Sbjct: 235 NAL 237


>gi|159028343|emb|CAO87241.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 166

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 48/156 (30%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              +L+N+    +   +  K+     V +GR   +TP    R+ +++  P W  P +   
Sbjct: 38  ETRLLLNLKKRRVFVYQGQKIIASYPVAIGRPGWETPTGQFRVIQMVREPVWEHPFT--- 94

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
             ++   + +P   +                    W   +  NF                
Sbjct: 95  GQLVPSGKNNPLGARWIGF----------------WT--DGANF---------------- 120

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                      H TP+  L     R  + GCVR+R+
Sbjct: 121 --------IGFHGTPQENLIG---RAVSHGCVRMRD 145


>gi|149924298|ref|ZP_01912669.1| hypothetical protein PPSIR1_17095 [Plesiocystis pacifica SIR-1]
 gi|149814834|gb|EDM74401.1| hypothetical protein PPSIR1_17095 [Plesiocystis pacifica SIR-1]
          Length = 209

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 101 PLHLG--NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L LG  +   +   ++ RL   G    +  L         +A++ FQ + GL+ +G  D
Sbjct: 139 KLKLGHLDPHDTPSGVQHRLRALGYYFGA--LDADHGDRTAAALRRFQTKQGLEVTGEAD 196

Query: 159 SSTLEAM 165
            +T+ A+
Sbjct: 197 DATMSAL 203


>gi|311741708|ref|ZP_07715530.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303229|gb|EFQ79310.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 382

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 12/68 (17%)

Query: 110 SVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQMRHGLDPSGMV 157
            V   R  L   G L   KG               +FDA +   +K FQ   G+ P+G +
Sbjct: 2   RVAEARATLARLGLLSDFKGELSAWKKQKYSESDKSFDANLSEVLKAFQQSRGIVPTGEI 61

Query: 158 DSSTLEAM 165
           D  TL  +
Sbjct: 62  DDLTLREL 69



 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
            G     + +   F     +A+K +Q   GL   G+   +T+ A+ +           N+
Sbjct: 104 LGFY--QQRVDGHFGTNTHAALKEYQHNCGLQEDGVCGPATIRALGLLGRRITGGSAHNI 161

Query: 181 ---MRIKKLLEQKMGLRYVL 197
               R++    +  G R V+
Sbjct: 162 QERERVRNAGPKLAGKRVVI 181


>gi|182419910|ref|ZP_02951147.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237668684|ref|ZP_04528668.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182376279|gb|EDT73863.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237657032|gb|EEP54588.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 465

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           +  +G  YV VNI    L   +NGK+  +  ++ G   + TP
Sbjct: 332 DDDIGDTYVEVNITRQHLWFYKNGKLLTQGDIVTGCQSKNTP 373


>gi|118478116|ref|YP_895267.1| spore cortex-lytic enzyme [Bacillus thuringiensis str. Al Hakam]
 gi|196043628|ref|ZP_03110866.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus 03BB108]
 gi|225864724|ref|YP_002750102.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus 03BB102]
 gi|228934029|ref|ZP_04096872.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229184969|ref|ZP_04312159.1| Spore cortex-lytic enzyme [Bacillus cereus BGSC 6E1]
 gi|118417341|gb|ABK85760.1| spore cortex-lytic enzyme [Bacillus thuringiensis str. Al Hakam]
 gi|196025937|gb|EDX64606.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus 03BB108]
 gi|225788886|gb|ACO29103.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus 03BB102]
 gi|228598444|gb|EEK56074.1| Spore cortex-lytic enzyme [Bacillus cereus BGSC 6E1]
 gi|228825725|gb|EEM71515.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 253

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|186686453|ref|YP_001869649.1| hypothetical protein Npun_F6437 [Nostoc punctiforme PCC 73102]
 gi|186468905|gb|ACC84706.1| hypothetical protein Npun_F6437 [Nostoc punctiforme PCC 73102]
          Length = 521

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 31/97 (31%), Gaps = 16/97 (16%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM----RHGLDPSGM--VDS 159
           N S  V+ ++ RL   G        S   D  +  A+KLFQ     R  ++  G   V  
Sbjct: 292 NKSADVKAIKGRLYELGYKWVGDPDSADRDRGLFDAIKLFQSIIAGRSTVNGDGRVDVGG 351

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            T   +             N  R + + +       V
Sbjct: 352 ITHRWLQ----------AANAPRWELMPKSDPNNGLV 378


>gi|225427043|ref|XP_002267238.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 370

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    +  L++     G L  P+   +  FD+  E+AV ++Q + GL  SG +DS T+ 
Sbjct: 53  GSQVSGMSELKKYFQRFGYLPVPNTNFTDVFDSRFETAVIMYQTKLGLPVSGKLDSKTIT 112

Query: 164 AMNVP 168
           A+  P
Sbjct: 113 AIVSP 117


>gi|261420536|ref|YP_003254218.1| carboxyl-terminal protease [Geobacillus sp. Y412MC61]
 gi|297531348|ref|YP_003672623.1| carboxyl-terminal protease [Geobacillus sp. C56-T3]
 gi|319768205|ref|YP_004133706.1| carboxyl-terminal protease [Geobacillus sp. Y412MC52]
 gi|261376993|gb|ACX79736.1| carboxyl-terminal protease [Geobacillus sp. Y412MC61]
 gi|297254600|gb|ADI28046.1| carboxyl-terminal protease [Geobacillus sp. C56-T3]
 gi|317113071|gb|ADU95563.1| carboxyl-terminal protease [Geobacillus sp. Y412MC52]
          Length = 482

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +PL    +   +   ++ L   G  +P +     F    E AV+ FQ  + L  +G +D 
Sbjct: 392 KPLRYDMNDEQIANAQKMLKGLGF-NPGRTDG-YFSKETEQAVQAFQKANQLPVTGRIDE 449

Query: 160 STLEAM 165
           +T + +
Sbjct: 450 TTADVL 455


>gi|194100645|ref|YP_002003394.1| gp36 [Mycobacterium phage Predator]
 gi|192758361|gb|ACF05133.1| gp36 [Mycobacterium phage Predator]
          Length = 318

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 88  ILSRGGWPE-----LPIRPLHLGNSSVSVQRLRERLI-ISGDLDPSKGLSV-AFDAYVES 140
           I + GG P       P   L +G++   V  L++++  + G+           F     +
Sbjct: 158 IWAPGGAPTDPPANTPDGYLQIGSTGDQVLYLQQKMNKVFGNYKAMPLDEDGIFGPMTAN 217

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAM 165
           AV  FQ R  +   G+V   T + +
Sbjct: 218 AVSEFQSRSLISVDGIVGPETKKRL 242


>gi|160944034|ref|ZP_02091264.1| hypothetical protein FAEPRAM212_01535 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444710|gb|EDP21714.1| hypothetical protein FAEPRAM212_01535 [Faecalibacterium prausnitzii
           M21/2]
          Length = 227

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  L+  L        +      F     +AVK+FQ   GLD  G V   T
Sbjct: 171 ISTLQAHLQSLAY--DTGTADGIFGPKTTAAVKMFQKYMGLDADGKVGPKT 219


>gi|319778023|ref|YP_004134453.1| beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317171742|gb|ADV15279.1| beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 720

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 4/72 (5%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V  L+  L        +  +   F +   SAVK FQ  +G+   G V   T  A+ +
Sbjct: 73  DRRVALLQSVLTDKSVY--ASAIDGVFGSQTASAVKSFQSTYGMPVDGTVGMQTGSALGL 130

Query: 168 PVDL--RIRQLQ 177
           P     + R L 
Sbjct: 131 PFWQANKARSLA 142


>gi|262371387|ref|ZP_06064705.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter johnsonii SH046]
 gi|262313724|gb|EEY94773.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter johnsonii SH046]
          Length = 345

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 41/151 (27%), Gaps = 46/151 (30%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
              K+       +G  D  +P     I  I+FNP+                     +++ 
Sbjct: 228 RQNKIIASFPATIGSEDNPSPTGTHAIGSIVFNPH---------YSYNPK-----NFIQG 273

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNTYMHDTP 327
            N+                              PG  N + +  I           H TP
Sbjct: 274 KNLK------------------------PLSLPPGPNNPVGNIWIGLSRPSFGI--HGTP 307

Query: 328 EPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            P L +      + GC+R+ N    +L   L
Sbjct: 308 NPALISKTA---SHGCIRLTNWDANNLAKVL 335


>gi|205373812|ref|ZP_03226614.1| spore cortex-lytic enzyme [Bacillus coahuilensis m4-4]
          Length = 319

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V  L+ RL   G  +    +   F      AV+ FQ   G++  G V   T   
Sbjct: 41  GAVGEDVVELQARLQYIGFYNG--KIDGVFGWGTYWAVRNFQYEFGMEVDGFVGEETKNK 98

Query: 165 M 165
           +
Sbjct: 99  L 99


>gi|196032602|ref|ZP_03100016.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus W]
 gi|218903872|ref|YP_002451706.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH820]
 gi|228927802|ref|ZP_04090850.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228946365|ref|ZP_04108687.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229122301|ref|ZP_04251515.1| Spore cortex-lytic enzyme [Bacillus cereus 95/8201]
 gi|195995353|gb|EDX59307.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus W]
 gi|218539399|gb|ACK91797.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH820]
 gi|228661150|gb|EEL16776.1| Spore cortex-lytic enzyme [Bacillus cereus 95/8201]
 gi|228813291|gb|EEM59590.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228831865|gb|EEM77454.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 253

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|218531762|ref|YP_002422578.1| peptidoglycan-binding protein [Methylobacterium chloromethanicum
           CM4]
 gi|218524065|gb|ACK84650.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           chloromethanicum CM4]
          Length = 233

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V  ++  L+  G    S G+         +A+  FQ   GL   G+    T   +
Sbjct: 4   VAEIQRALLARGYDLGSSGVDGDAGPRTIAALTAFQRLAGLVADGIAGPRTQAVL 58


>gi|324326719|gb|ADY21979.1| spore cortex-lytic enzyme [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 253

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|229091754|ref|ZP_04222954.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-42]
 gi|228691582|gb|EEL45335.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-42]
          Length = 253

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|194016960|ref|ZP_03055573.1| spore cortex-lytic enzyme [Bacillus pumilus ATCC 7061]
 gi|194011566|gb|EDW21135.1| spore cortex-lytic enzyme [Bacillus pumilus ATCC 7061]
          Length = 303

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPS 154
               + +  G +   V  L+ RL  +G  +    +   +      AV+ FQ ++G+    
Sbjct: 31  AFTSQVIQRGATGEDVVELQARLQYNGFYNG--KIDGVYGWGTYWAVRNFQSQYGVKKVD 88

Query: 155 GMVDSSTLEAM 165
           G+V   T   +
Sbjct: 89  GLVGKQTKSLL 99


>gi|329928740|ref|ZP_08282589.1| peptidase, S41 family [Paenibacillus sp. HGF5]
 gi|328937521|gb|EGG33939.1| peptidase, S41 family [Paenibacillus sp. HGF5]
          Length = 490

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            L   G    +      FD   E AVK FQ +H L   G++
Sbjct: 409 MLEAVGY--AAGRTDGYFDRNTEKAVKSFQSKHKLKADGII 447


>gi|282931884|ref|ZP_06337363.1| NlpC/P60 family protein [Lactobacillus jensenii 208-1]
 gi|281303995|gb|EFA96118.1| NlpC/P60 family protein [Lactobacillus jensenii 208-1]
          Length = 736

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 16/84 (19%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQ--RLRERLIISGDLDPSKGLSVAFDAYVESA 141
            Y  I      P +     +LG +   V+   +  RL   G           ++    +A
Sbjct: 501 QYNQIQ-----PSIYAPGYNLGYNYEGVKTWLVMRRL---GTYAGYAN----YNWATVNA 548

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           VK FQ  HGL+P+G+VD +T   +
Sbjct: 549 VKNFQASHGLNPTGIVDLAT--WL 570


>gi|261409610|ref|YP_003245851.1| carboxyl-terminal protease [Paenibacillus sp. Y412MC10]
 gi|261286073|gb|ACX68044.1| carboxyl-terminal protease [Paenibacillus sp. Y412MC10]
          Length = 490

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            L   G    +      FD   E AVK FQ +H L   G++
Sbjct: 409 MLEAVGY--AAGRTDGYFDRNTEKAVKSFQSKHKLKADGII 447


>gi|229030433|ref|ZP_04186473.1| Spore cortex-lytic enzyme [Bacillus cereus AH1271]
 gi|228730872|gb|EEL81812.1| Spore cortex-lytic enzyme [Bacillus cereus AH1271]
          Length = 259

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|229097273|ref|ZP_04228235.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-29]
 gi|228686084|gb|EEL40000.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-29]
          Length = 259

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|297205125|ref|ZP_06922521.1| periplasmic protease [Lactobacillus jensenii JV-V16]
 gi|297149703|gb|EFH30000.1| periplasmic protease [Lactobacillus jensenii JV-V16]
          Length = 638

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 16/84 (19%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQ--RLRERLIISGDLDPSKGLSVAFDAYVESA 141
            Y  I      P +     +LG +   V+   +  RL   G           ++    +A
Sbjct: 403 QYNQIQ-----PSIYAPGYNLGYNYEGVKTWLVMRRL---GTYAGYAN----YNWATVNA 450

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           VK FQ  HGL+P+G+VD +T   +
Sbjct: 451 VKNFQASHGLNPTGIVDLAT--WL 472


>gi|42781838|ref|NP_979085.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus ATCC 10987]
 gi|206973778|ref|ZP_03234696.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus H3081.97]
 gi|217960192|ref|YP_002338752.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH187]
 gi|222096255|ref|YP_002530312.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus Q1]
 gi|229139388|ref|ZP_04267959.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST26]
 gi|42737762|gb|AAS41693.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus ATCC 10987]
 gi|206747934|gb|EDZ59323.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus H3081.97]
 gi|217063319|gb|ACJ77569.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH187]
 gi|221240313|gb|ACM13023.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus Q1]
 gi|228643935|gb|EEL00196.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST26]
          Length = 259

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|229045449|ref|ZP_04192106.1| Spore cortex-lytic enzyme [Bacillus cereus AH676]
 gi|296503296|ref|YP_003664996.1| cell wall hydrolase CwlJ [Bacillus thuringiensis BMB171]
 gi|228724891|gb|EEL76191.1| Spore cortex-lytic enzyme [Bacillus cereus AH676]
 gi|296324348|gb|ADH07276.1| cell wall hydrolase cwlJ [Bacillus thuringiensis BMB171]
          Length = 259

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|229110200|ref|ZP_04239774.1| Spore cortex-lytic enzyme [Bacillus cereus Rock1-15]
 gi|228673186|gb|EEL28456.1| Spore cortex-lytic enzyme [Bacillus cereus Rock1-15]
          Length = 259

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|30262721|ref|NP_845098.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. Ames]
 gi|47528039|ref|YP_019388.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49185569|ref|YP_028821.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Sterne]
 gi|49479156|ref|YP_036844.1| spore cortex-lytic enzyme [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|65320051|ref|ZP_00393010.1| COG3773: Cell wall hydrolyses involved in spore germination
           [Bacillus anthracis str. A2012]
 gi|165868424|ref|ZP_02213084.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0488]
 gi|167631745|ref|ZP_02390072.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0442]
 gi|167637623|ref|ZP_02395902.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0193]
 gi|170685440|ref|ZP_02876664.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0465]
 gi|170704742|ref|ZP_02895208.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0389]
 gi|177649478|ref|ZP_02932480.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0174]
 gi|190565234|ref|ZP_03018154.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis
           Tsiankovskii-I]
 gi|227814439|ref|YP_002814448.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. CDC
           684]
 gi|228915357|ref|ZP_04078950.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229601515|ref|YP_002867030.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0248]
 gi|254685313|ref|ZP_05149173.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           CNEVA-9066]
 gi|254722722|ref|ZP_05184510.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A1055]
 gi|254737769|ref|ZP_05195472.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Western North America USA6153]
 gi|254743057|ref|ZP_05200742.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Kruger B]
 gi|254752083|ref|ZP_05204120.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Vollum]
 gi|254760604|ref|ZP_05212628.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Australia 94]
 gi|301054274|ref|YP_003792485.1| spore cortex-lytic enzyme [Bacillus anthracis CI]
 gi|30257353|gb|AAP26584.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. Ames]
 gi|47503187|gb|AAT31863.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49179496|gb|AAT54872.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Sterne]
 gi|49330712|gb|AAT61358.1| spore cortex-lytic enzyme [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|164715150|gb|EDR20667.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0488]
 gi|167514172|gb|EDR89539.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0193]
 gi|167532043|gb|EDR94679.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0442]
 gi|170130543|gb|EDS99404.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0389]
 gi|170670800|gb|EDT21539.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0465]
 gi|172084552|gb|EDT69610.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0174]
 gi|190563261|gb|EDV17226.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis
           Tsiankovskii-I]
 gi|227002927|gb|ACP12670.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. CDC
           684]
 gi|228844300|gb|EEM89358.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229265923|gb|ACQ47560.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0248]
 gi|300376443|gb|ADK05347.1| spore cortex-lytic enzyme [Bacillus cereus biovar anthracis str.
           CI]
          Length = 253

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|269796068|ref|YP_003315523.1| hypothetical protein Sked_27870 [Sanguibacter keddieii DSM 10542]
 gi|269098253|gb|ACZ22689.1| hypothetical protein Sked_27870 [Sanguibacter keddieii DSM 10542]
          Length = 515

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           I   G  P    R L +G S   V +L++ L   G ++P    S  +DA   +AV
Sbjct: 122 IALPGELPA--YRTLRVGVSGPDVLQLKQALAALG-INPGNVESDVYDAATVAAV 173


>gi|30020874|ref|NP_832505.1| cell wall hydrolase cwlJ [Bacillus cereus ATCC 14579]
 gi|218234005|ref|YP_002367468.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus B4264]
 gi|228921423|ref|ZP_04084746.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228939871|ref|ZP_04102448.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228972761|ref|ZP_04133360.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228979345|ref|ZP_04139681.1| Spore cortex-lytic enzyme [Bacillus thuringiensis Bt407]
 gi|228985846|ref|ZP_04145995.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229070227|ref|ZP_04203479.1| Spore cortex-lytic enzyme [Bacillus cereus F65185]
 gi|229079940|ref|ZP_04212471.1| Spore cortex-lytic enzyme [Bacillus cereus Rock4-2]
 gi|229103362|ref|ZP_04234044.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-28]
 gi|229116269|ref|ZP_04245659.1| Spore cortex-lytic enzyme [Bacillus cereus Rock1-3]
 gi|229128092|ref|ZP_04257074.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-Cer4]
 gi|229145328|ref|ZP_04273717.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST24]
 gi|229156330|ref|ZP_04284426.1| Spore cortex-lytic enzyme [Bacillus cereus ATCC 4342]
 gi|229179035|ref|ZP_04306392.1| Spore cortex-lytic enzyme [Bacillus cereus 172560W]
 gi|229190847|ref|ZP_04317839.1| Spore cortex-lytic enzyme [Bacillus cereus ATCC 10876]
 gi|61242533|sp|P0A3V0|SLEB_BACCR RecName: Full=Spore cortex-lytic enzyme; Short=SCLE; AltName:
           Full=Germination-specific amidase; Flags: Precursor
 gi|61242541|sp|P0A3V1|SLEB_BACCE RecName: Full=Spore cortex-lytic enzyme; Short=SCLE; AltName:
           Full=Germination-specific amidase; Flags: Precursor
 gi|1644192|dbj|BAA09800.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus]
 gi|29896427|gb|AAP09706.1| Cell wall hydrolase cwlJ [Bacillus cereus ATCC 14579]
 gi|218161962|gb|ACK61954.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus B4264]
 gi|228592637|gb|EEK50464.1| Spore cortex-lytic enzyme [Bacillus cereus ATCC 10876]
 gi|228604403|gb|EEK61867.1| Spore cortex-lytic enzyme [Bacillus cereus 172560W]
 gi|228627205|gb|EEK83936.1| Spore cortex-lytic enzyme [Bacillus cereus ATCC 4342]
 gi|228638167|gb|EEK94608.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST24]
 gi|228655367|gb|EEL11223.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-Cer4]
 gi|228667101|gb|EEL22553.1| Spore cortex-lytic enzyme [Bacillus cereus Rock1-3]
 gi|228679858|gb|EEL34053.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-28]
 gi|228703319|gb|EEL55774.1| Spore cortex-lytic enzyme [Bacillus cereus Rock4-2]
 gi|228712890|gb|EEL64813.1| Spore cortex-lytic enzyme [Bacillus cereus F65185]
 gi|228773881|gb|EEM22298.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228780349|gb|EEM28580.1| Spore cortex-lytic enzyme [Bacillus thuringiensis Bt407]
 gi|228786976|gb|EEM34956.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228819802|gb|EEM65850.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228838196|gb|EEM83514.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|312828406|emb|CBY16475.1| SceA protein [Bacillus thuringiensis serovar kurstaki str.
           YBT-1520]
 gi|326940519|gb|AEA16415.1| cell wall hydrolase cwlJ [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 259

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|228901287|ref|ZP_04065483.1| Spore cortex-lytic enzyme [Bacillus thuringiensis IBL 4222]
 gi|228858352|gb|EEN02816.1| Spore cortex-lytic enzyme [Bacillus thuringiensis IBL 4222]
          Length = 253

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|119512604|ref|ZP_01631680.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
 gi|119462737|gb|EAW43698.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
          Length = 394

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSS 160
           L  G+    V+RL+ +L   G  +    +   +    ++AV  FQ    L    G+ D +
Sbjct: 50  LIPGSRGADVKRLQTKLKDLGYYNSE--IDGLYGPDTQNAVVQFQKFRNLGRTDGVADLT 107

Query: 161 TLEAM 165
           T  ++
Sbjct: 108 TRNSL 112


>gi|47569014|ref|ZP_00239704.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus G9241]
 gi|47554283|gb|EAL12644.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus G9241]
          Length = 259

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|83313131|ref|YP_423395.1| hypothetical protein amb4032 [Magnetospirillum magneticum AMB-1]
 gi|82947972|dbj|BAE52836.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
          Length = 185

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 15/92 (16%)

Query: 103 HLGNSSVS----VQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            +G+S  +    V  ++  +   G  DP    GL+   D  +   +K FQ  H L+  G+
Sbjct: 8   TIGSSYPADPGDVLNVKTSMNNLGYYDPPAAYGLTPWPDTPMFDGIKNFQKDHDLEVDGI 67

Query: 157 VDSS--TLEAMNV-------PVDLRIRQLQVN 179
           +     T+  MN               QL  N
Sbjct: 68  MHPDGPTVTTMNKGLAQGEDSPSDGNEQLAYN 99


>gi|229150962|ref|ZP_04279173.1| Spore cortex-lytic enzyme [Bacillus cereus m1550]
 gi|228632522|gb|EEK89140.1| Spore cortex-lytic enzyme [Bacillus cereus m1550]
          Length = 259

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|218897774|ref|YP_002446185.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus G9842]
 gi|228908491|ref|ZP_04072332.1| Spore cortex-lytic enzyme [Bacillus thuringiensis IBL 200]
 gi|218545433|gb|ACK97827.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus G9842]
 gi|228851138|gb|EEM95951.1| Spore cortex-lytic enzyme [Bacillus thuringiensis IBL 200]
          Length = 253

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|228958984|ref|ZP_04120685.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229196921|ref|ZP_04323662.1| Spore cortex-lytic enzyme [Bacillus cereus m1293]
 gi|228586644|gb|EEK44721.1| Spore cortex-lytic enzyme [Bacillus cereus m1293]
 gi|228800645|gb|EEM47561.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 239

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 18  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 75

Query: 162 LEAM 165
            + +
Sbjct: 76  KQML 79


>gi|157278505|ref|NP_001098354.1| membrane-type matrix metalloproteinase [Oryzias latipes]
 gi|46359591|dbj|BAD15298.1| membrane-type matrix metalloproteinase [Oryzias latipes]
          Length = 607

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L + G L P+        +   ++SA+   Q R+GL+ +G +DS+T+E M  P
Sbjct: 45  LQMYGYLPPADPRMAVLRSAKVMQSAIAAMQRRYGLNVTGTLDSNTIEWMRQP 97


>gi|52142756|ref|YP_084072.1| spore cortex-lytic enzyme [Bacillus cereus E33L]
 gi|51976225|gb|AAU17775.1| spore cortex-lytic enzyme [Bacillus cereus E33L]
          Length = 253

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQEKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|225028427|ref|ZP_03717619.1| hypothetical protein EUBHAL_02701 [Eubacterium hallii DSM 3353]
 gi|224954271|gb|EEG35480.1| hypothetical protein EUBHAL_02701 [Eubacterium hallii DSM 3353]
          Length = 198

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G S   V++++E+L +I+GD    P   +   +     ++VK+FQ    L  +
Sbjct: 114 PGYELTIGASGQKVRQMQEQLNVIAGDYPLIPKIRVDGIYGPATANSVKIFQKIFHLPET 173

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           G+VD +T          +I Q+ V + RI +L
Sbjct: 174 GVVDFATWY--------KISQIYVAVSRIAEL 197


>gi|330468307|ref|YP_004406050.1| peptidoglycan-binding domain 1 protein [Verrucosispora maris
           AB-18-032]
 gi|328811278|gb|AEB45450.1| peptidoglycan-binding domain 1 protein [Verrucosispora maris
           AB-18-032]
          Length = 336

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+L  R L  G++   V+ L+    ++G L     +   F    E+ V+ FQ    L   
Sbjct: 184 PKLGDRVLRRGSTGSDVRELQT---LAGRLGGDLAVDGDFGPRTETWVRDFQKAQRLTVD 240

Query: 155 GMVDSS 160
           G+V + 
Sbjct: 241 GVVGAQ 246



 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             + +FDA  ES V+ +Q   G+   G+V   T   M V
Sbjct: 294 PATGSFDAKTESGVRWYQGMRGITVDGVVGPLTWRQMGV 332


>gi|229085545|ref|ZP_04217781.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-44]
 gi|228697766|gb|EEL50515.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-44]
          Length = 252

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  S T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQQKFGLPVDGLAGSKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|254469425|ref|ZP_05082830.1| secretion activator protein [Pseudovibrio sp. JE062]
 gi|211961260|gb|EEA96455.1| secretion activator protein [Pseudovibrio sp. JE062]
          Length = 260

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 21/125 (16%)

Query: 119 IISGDLDPSKGLSVAFDAYV----ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV----- 169
            + GD  P       FD  V      AVK  QM  G+   G++   TL A+         
Sbjct: 75  AVQGDRLPLGLDYALFDFAVNSGPARAVKTLQMILGVGVDGVIGLKTLAAIKQRPVIYLV 134

Query: 170 -DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            +L  ++L   + R++     K G    + ++   SL+ +EN           GR  +  
Sbjct: 135 NELSAQRLAF-MKRLRNWPYNKNGWSRRVRDVQEKSLKLMENS----------GRQKQPL 183

Query: 229 PILHS 233
           P+L  
Sbjct: 184 PVLDG 188


>gi|328880761|emb|CCA54000.1| hypothetical protein SVEN_0713 [Streptomyces venezuelae ATCC 10712]
          Length = 137

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 6/77 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHG 150
           W ++P   L  G+S V V+ L++ L+ +G +        +  +F     +AV  FQ R G
Sbjct: 55  W-DIPTVVLAKGSSGVCVRGLQDALLEAGAVRAEDQPGFVDGSFGPKTYNAVVAFQRRAG 113

Query: 151 LD--PSGMVDSSTLEAM 165
           +     G+V   T   +
Sbjct: 114 VTGGADGVVGRYTWHHL 130


>gi|314938218|ref|ZP_07845518.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0133a04]
 gi|314943113|ref|ZP_07849912.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0133C]
 gi|314949310|ref|ZP_07852653.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0082]
 gi|314952244|ref|ZP_07855259.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0133A]
 gi|314992102|ref|ZP_07857552.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0133B]
 gi|314996284|ref|ZP_07861340.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0133a01]
 gi|313589528|gb|EFR68373.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0133a01]
 gi|313593316|gb|EFR72161.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0133B]
 gi|313595639|gb|EFR74484.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0133A]
 gi|313598172|gb|EFR77017.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0133C]
 gi|313642414|gb|EFS06994.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0133a04]
 gi|313644316|gb|EFS08896.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium TX0082]
          Length = 426

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 301 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTP 338


>gi|293553689|ref|ZP_06674313.1| hypothetical protein EfmE1039_1055 [Enterococcus faecium E1039]
 gi|291602264|gb|EFF32492.1| hypothetical protein EfmE1039_1055 [Enterococcus faecium E1039]
          Length = 466

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 341 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTP 378


>gi|293570112|ref|ZP_06681192.1| beta-lactam-insensitive peptidoglycan transpeptidase [Enterococcus
           faecium E1071]
 gi|291587484|gb|EFF19368.1| beta-lactam-insensitive peptidoglycan transpeptidase [Enterococcus
           faecium E1071]
          Length = 466

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 341 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTP 378


>gi|261206675|ref|ZP_05921373.1| erfK/ybiS/ycfS/ynhG family protein [Enterococcus faecium TC 6]
 gi|289565036|ref|ZP_06445490.1| ErfK family protein [Enterococcus faecium D344SRF]
 gi|294614903|ref|ZP_06694794.1| ErfK/YbiS/YcfS/YnhG family [Enterococcus faecium E1636]
 gi|260079168|gb|EEW66861.1| erfK/ybiS/ycfS/ynhG family protein [Enterococcus faecium TC 6]
 gi|289163243|gb|EFD11089.1| ErfK family protein [Enterococcus faecium D344SRF]
 gi|291592189|gb|EFF23807.1| ErfK/YbiS/YcfS/YnhG family [Enterococcus faecium E1636]
          Length = 466

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 341 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTP 378


>gi|257886025|ref|ZP_05665678.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,231,501]
 gi|257821881|gb|EEV49011.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,231,501]
          Length = 466

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 341 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTP 378


>gi|218847877|ref|YP_002454610.1| N-acetylmuramoyl-L-alanine amidase CwlA [Bacillus cereus G9842]
 gi|218546379|gb|ACK98771.1| N-acetylmuramoyl-L-alanine amidase CwlA [Bacillus cereus G9842]
          Length = 364

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGL 151
            LP   L  G+S  SV+ +++ L           P+ G    +     +AV  FQ  +  
Sbjct: 285 TLPDGVLKKGSSGESVRAVQKALTSVYFYPDKSAPNYGCDGFYGDKTVNAVYRFQSVYCS 344

Query: 152 DPSGMVDSSTLEAM 165
           +  G+    T   +
Sbjct: 345 NADGIYGPETKRKL 358


>gi|16080577|ref|NP_391404.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|221311474|ref|ZP_03593321.1| hypothetical protein Bsubs1_19066 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315801|ref|ZP_03597606.1| hypothetical protein BsubsN3_18982 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320716|ref|ZP_03602010.1| hypothetical protein BsubsJ_18945 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325001|ref|ZP_03606295.1| hypothetical protein BsubsS_19101 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321313070|ref|YP_004205357.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis BSn5]
 gi|81669165|sp|O35002|CTPB_BACSU RecName: Full=Carboxy-terminal processing protease CtpB;
           Short=C-terminal processing protease; Flags: Precursor
 gi|2618834|gb|AAC67263.1| putative protease [Bacillus subtilis]
 gi|2636050|emb|CAB15541.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|148356709|dbj|BAF63027.1| serine protease [Bacillus subtilis subsp. natto]
 gi|320019344|gb|ADV94330.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis BSn5]
          Length = 480

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 23/112 (20%)

Query: 82  IAFYQDILSRGGW-------PELPIR--------------PLHLGNSSVSVQRLRERLII 120
           +  Y+ +   G W       P + I+              PL +  ++  V+   + L+ 
Sbjct: 351 LTLYKWLTPNGNWIHKKGIEPTIAIKQPDYFSAGPLQLKEPLKVDMNNEDVKH-AQVLLK 409

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
               DP +     F   ++ AV  FQ ++ L+ +G++D+ T E +N  ++ +
Sbjct: 410 GLSFDPGREDG-YFSKDMKKAVMAFQDQNKLNKTGVIDTRTAETLNQQIEKK 460


>gi|237809403|ref|YP_002893843.1| Peptidoglycan-binding domain 1 protein [Tolumonas auensis DSM 9187]
 gi|237501664|gb|ACQ94257.1| Peptidoglycan-binding domain 1 protein [Tolumonas auensis DSM 9187]
          Length = 542

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           P +     FDA +   V+ FQ + GL   G+    TL  +
Sbjct: 469 PVRNKVSRFDAQLTDKVRQFQKQEGLVEDGVAGEQTLLRL 508


>gi|69245440|ref|ZP_00603435.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium DO]
 gi|257879851|ref|ZP_05659504.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,230,933]
 gi|257882577|ref|ZP_05662230.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,231,502]
 gi|257891692|ref|ZP_05671345.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,231,410]
 gi|257894167|ref|ZP_05673820.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,231,408]
 gi|260559524|ref|ZP_05831705.1| erfK/ybiS/ycfS/ynhG family protein [Enterococcus faecium C68]
 gi|293563190|ref|ZP_06677646.1| beta-lactam-insensitive peptidoglycan transpeptidase [Enterococcus
           faecium E1162]
 gi|294618625|ref|ZP_06698164.1| putative peptidoglycan binding protein [Enterococcus faecium E1679]
 gi|294623701|ref|ZP_06702534.1| Peptidoglycan binding protein [Enterococcus faecium U0317]
 gi|68195822|gb|EAN10258.1| ErfK/YbiS/YcfS/YnhG [Enterococcus faecium DO]
 gi|257814079|gb|EEV42837.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,230,933]
 gi|257818235|gb|EEV45563.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,231,502]
 gi|257828052|gb|EEV54678.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,231,410]
 gi|257830546|gb|EEV57153.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus faecium 1,231,408]
 gi|260074623|gb|EEW62944.1| erfK/ybiS/ycfS/ynhG family protein [Enterococcus faecium C68]
 gi|291595144|gb|EFF26482.1| putative peptidoglycan binding protein [Enterococcus faecium E1679]
 gi|291596916|gb|EFF28134.1| Peptidoglycan binding protein [Enterococcus faecium U0317]
 gi|291604840|gb|EFF34318.1| beta-lactam-insensitive peptidoglycan transpeptidase [Enterococcus
           faecium E1162]
          Length = 466

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 341 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTP 378


>gi|224370554|ref|YP_002604718.1| hypothetical protein HRM2_34790 [Desulfobacterium autotrophicum
           HRM2]
 gi|223693271|gb|ACN16554.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 328

 Score = 43.3 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           R R  +   L PS+  +  +D      V+  Q    L P G+V   T +A+N
Sbjct: 39  RARAALLAKL-PSERQTRTYDTTTFKLVRAIQEERQLRPDGVVGKQTADAVN 89


>gi|229105784|ref|ZP_04236413.1| Carboxyl-terminal protease [Bacillus cereus Rock3-28]
 gi|228677673|gb|EEL31921.1| Carboxyl-terminal protease [Bacillus cereus Rock3-28]
          Length = 494

 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR------QLQVNL 180
            T EA+   +  +IR      QLQ  L
Sbjct: 463 KTAEAIQTKIIEKIRSGENDLQLQAAL 489


>gi|229099607|ref|ZP_04230535.1| Carboxyl-terminal protease [Bacillus cereus Rock3-29]
 gi|229118673|ref|ZP_04248025.1| Carboxyl-terminal protease [Bacillus cereus Rock1-3]
 gi|228664865|gb|EEL20355.1| Carboxyl-terminal protease [Bacillus cereus Rock1-3]
 gi|228683903|gb|EEL37853.1| Carboxyl-terminal protease [Bacillus cereus Rock3-29]
          Length = 494

 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR------QLQVNL 180
            T EA+   +  +IR      QLQ  L
Sbjct: 463 KTAEAIQTKIIEKIRSGENDLQLQAAL 489


>gi|118590912|ref|ZP_01548312.1| negative regulator of AmpC, AmpD [Stappia aggregata IAM 12614]
 gi|118436434|gb|EAV43075.1| negative regulator of AmpC, AmpD [Stappia aggregata IAM 12614]
          Length = 254

 Score = 43.3 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSS 160
           +  G+S   V+ L+  L + G       ++  FD      V  FQ         G+ D S
Sbjct: 181 MQEGDSGQPVEALQTMLALYGY---ELDITGTFDLKTRQVVAAFQRHFRPEKVDGVADQS 237

Query: 161 TLEAMN 166
           T+E +N
Sbjct: 238 TIETLN 243


>gi|320101740|ref|YP_004177331.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Isosphaera
           pallida ATCC 43644]
 gi|319749022|gb|ADV60782.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Isosphaera
           pallida ATCC 43644]
          Length = 702

 Score = 43.3 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 48/166 (28%), Gaps = 24/166 (14%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
              ++  P     +  +   +         DN   R           +++E     ++A 
Sbjct: 261 AAGILYTPSGPIAVCVLTARNQDQRWTP--DNAAERFSAR-------LAREVYDHFQQA- 310

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
               D+   G        PL  G +   V+RL+  L    +  P   +   F    + AV
Sbjct: 311 ---ADLKEAGR----DDSPLAFGATGPRVERLQRLLNRRLEPSPGLVVDGDFGPATQEAV 363

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMN-------VPVDLRIRQLQVNLM 181
             FQ    L  +G+V      A+                  Q+N  
Sbjct: 364 IRFQKERHLGDNGVVTPEVWRALGELPPDPAGDPQAEADPAQLNAE 409


>gi|229161629|ref|ZP_04289609.1| Spore cortex-lytic enzyme [Bacillus cereus R309803]
 gi|228621874|gb|EEK78720.1| Spore cortex-lytic enzyme [Bacillus cereus R309803]
          Length = 259

 Score = 43.3 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQQKFGLPVDGLAGTKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|147773502|emb|CAN66781.1| hypothetical protein VITISV_013507 [Vitis vinifera]
          Length = 373

 Score = 43.3 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    +  L++     G L  P+   +  FD+  E+AV ++Q + GL  SG +DS T+ 
Sbjct: 53  GSQVSGMSELKKYFQRFGYLPVPNTNFTDVFDSRFETAVIMYQTKLGLPVSGKLDSKTIT 112

Query: 164 AMNVP 168
           A+  P
Sbjct: 113 AIVSP 117


>gi|254974151|ref|ZP_05270623.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-66c26]
 gi|255091552|ref|ZP_05321030.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile CIP
           107932]
 gi|255313279|ref|ZP_05354862.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-76w55]
 gi|255515969|ref|ZP_05383645.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-97b34]
 gi|255649060|ref|ZP_05395962.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-37x79]
 gi|260682251|ref|YP_003213536.1| putative spore peptidoglycan hydrolase [Clostridium difficile
           CD196]
 gi|260685850|ref|YP_003216983.1| putative spore peptidoglycan hydrolase [Clostridium difficile
           R20291]
 gi|306519173|ref|ZP_07405520.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-32g58]
 gi|260208414|emb|CBA60957.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile CD196]
 gi|260211866|emb|CBE02295.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile R20291]
          Length = 423

 Score = 43.3 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLD 152
             P   L +G+S   V+ ++ +L    +  P+         + A  E+AVK+FQ   GL 
Sbjct: 334 SFPGTTLQVGSSGQYVRTIQNQLNAISNSYPAVPKVIEDGIYGADTENAVKIFQGIFGLP 393

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            SG+VD  T   ++       R   +N
Sbjct: 394 QSGVVDFKTWYEISRVYVATTRIASLN 420


>gi|291007888|ref|ZP_06565861.1| hypothetical protein SeryN2_25476 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 378

 Score = 43.3 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 94  WPELPIRPLHLGN-SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W  L   P+  G+    +V+ L+  L   G   P+      +     +AV  FQ  +GL 
Sbjct: 309 WTALA--PVLSGDGQGDAVRALQTLLTSRGHYVPADA---HYAGRTATAVSDFQAANGLQ 363

Query: 153 PSGMVDSSTLEAM 165
           P+G+ D    + +
Sbjct: 364 PTGVADHEVWKRL 376


>gi|134100266|ref|YP_001105927.1| hypothetical protein SACE_3731 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912889|emb|CAM03002.1| hypothetical protein SACE_3731 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 368

 Score = 43.3 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 94  WPELPIRPLHLGN-SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W  L   P+  G+    +V+ L+  L   G   P+      +     +AV  FQ  +GL 
Sbjct: 299 WTALA--PVLSGDGQGDAVRALQTLLTSRGHYVPADA---HYAGRTATAVSDFQAANGLQ 353

Query: 153 PSGMVDSSTLEAM 165
           P+G+ D    + +
Sbjct: 354 PTGVADHEVWKRL 366


>gi|183179643|ref|ZP_02957854.1| vgrG protein [Vibrio cholerae MZO-3]
 gi|183013054|gb|EDT88354.1| vgrG protein [Vibrio cholerae MZO-3]
          Length = 1017

 Score = 43.3 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 671 IDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F    ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGGKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V + TL A+
Sbjct: 774 PSHQTHPSYSIG-PVDGIVGNGTLLAL 799


>gi|39936601|ref|NP_948877.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris CGA009]
 gi|39650457|emb|CAE28980.1| Putative peptidoglycan binding domain 1:N-acetylmuramoyl-L-alanine
           amidase, family 2 [Rhodopseudomonas palustris CGA009]
          Length = 261

 Score = 43.3 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 15/100 (15%)

Query: 86  QDILSRG--GWPE----LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           + + + G   W E    +P   L  G     V+ L++ L   G   P  G   ++D    
Sbjct: 160 RSLAASGVGLWVEPARIVPGPALKQGTEGDEVRLLQQALADYGYRVPVNG---SYDHATT 216

Query: 140 SAVKLFQMRHGL-DPSGMVDSSTLEAM-----NVPVDLRI 173
             V  FQ         G+ D+STL  +      +PV+ R 
Sbjct: 217 DVVTAFQRHFRPEKVDGIADASTLATLHALLARLPVEARA 256


>gi|315604691|ref|ZP_07879754.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313703|gb|EFU61757.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 353

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 100 RPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R    G S    V++L   L   G        +  FD    +A+K +Q   GL   G + 
Sbjct: 103 RDFSEGMSDGADVKQLETALSELGYF--QATPNEHFDWNTIAAIKRWQKALGLTQDGTLP 160

Query: 159 SSTLEAMNVPVDLRIRQLQ 177
             T+  +  P D+R+  L+
Sbjct: 161 LGTV--LFAPEDVRVGALK 177


>gi|108801144|ref|YP_641341.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Mycobacterium sp. MCS]
 gi|119870276|ref|YP_940228.1| peptidoglycan binding domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126436973|ref|YP_001072664.1| peptidoglycan binding domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108771563|gb|ABG10285.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Mycobacterium sp. MCS]
 gi|119696365|gb|ABL93438.1| Peptidoglycan-binding domain 1 protein [Mycobacterium sp. KMS]
 gi|126236773|gb|ABO00174.1| Peptidoglycan-binding domain 1 protein [Mycobacterium sp. JLS]
          Length = 232

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 103 HLGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDS 159
            +G +   V   + RL            +   +    E+AV+ FQ R  GL   G+V  
Sbjct: 163 RIGFADAHVAEAQRRLKYAYRRYAGHLEIDGVYGPETEAAVREFQRRTPGLLADGIVGP 221


>gi|229175852|ref|ZP_04303350.1| Carboxyl-terminal protease [Bacillus cereus MM3]
 gi|228607585|gb|EEK64909.1| Carboxyl-terminal protease [Bacillus cereus MM3]
          Length = 494

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|120555335|ref|YP_959686.1| peptidoglycan binding domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325184|gb|ABM19499.1| Peptidoglycan-binding domain 1 protein [Marinobacter aquaeolei VT8]
          Length = 136

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            + +  L     +  V  L+  L  +G       +S + D    + +  FQ  +GL+ +G
Sbjct: 17  TVALLGLAPVAQANEVVALKHALYGAGY--DITNVSPSMDDKTRAELTRFQKDNGLEATG 74

Query: 156 MVDSSTLEAM 165
           +++  T  A+
Sbjct: 75  ILNEETERAL 84


>gi|221195274|ref|ZP_03568330.1| cell wall hydrolase/autolysin [Atopobium rimae ATCC 49626]
 gi|221185177|gb|EEE17568.1| cell wall hydrolase/autolysin [Atopobium rimae ATCC 49626]
          Length = 309

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 20/108 (18%)

Query: 76  AQTEKAIAFYQ--------DILSRGGWPELPIRPLHLGNS----------SVSVQRLRER 117
             T KA+A ++        + +    W  L      LG+              V++L+ER
Sbjct: 39  PSTAKAVARFRLDHDLSLGEDVDTATWMLLVDESYQLGDRTLYLRLPNFHGNDVRQLQER 98

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L I G           +  + E+AVKLFQ   G    GM    TL+A+
Sbjct: 99  LNILGF--SCGKPDGQYGVHTEAAVKLFQESVGELADGMAFQDTLDAI 144



 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P+  G++  +V+ ++ERL+     +D S+     +      AV  F++ H L 
Sbjct: 3   PITPGSTGAAVEDIQERLVRLDYVIDDSEREKNTYGPSTAKAVARFRLDHDLS 55


>gi|262164753|ref|ZP_06032491.1| VgrG protein [Vibrio mimicus VM223]
 gi|262027133|gb|EEY45800.1| VgrG protein [Vibrio mimicus VM223]
          Length = 991

 Score = 43.3 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 671 IDVASLPTMMPSSANNTANDEPVAEEKIPERILKSDLLKPSDELEKLAKRQASAYRQ--- 727

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F +  ++A++ FQ  + 
Sbjct: 728 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQ 773

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V   TL A+
Sbjct: 774 PSHQTHPSYSIG-AVDGIVGKGTLLAL 799


>gi|145593093|ref|YP_001157390.1| peptidoglycan binding domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145302430|gb|ABP53012.1| Peptidoglycan-binding domain 1 protein [Salinispora tropica
           CNB-440]
          Length = 334

 Score = 43.3 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 8/57 (14%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM--------NVPVDLRIRQ 175
                  F     SAV  +Q   GL P G+V   T   +        N    LR+R+
Sbjct: 214 GATRDGVFGPKTRSAVIKYQRARGLTPDGIVGPKTWATLLGSLPSHPNGSRVLRLRR 270



 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 18/105 (17%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDP 126
            +T  A+  YQ         I+    W  L +  L    +   V RLR    + G D++ 
Sbjct: 223 PKTRSAVIKYQRARGLTPDGIVGPKTWATL-LGSLPSHPNGSRVLRLRRPTHMRGTDVEA 281

Query: 127 SK--------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            +             F     S V+ +Q   GL P G+V   T  
Sbjct: 282 VQRFIGARCGAADGIFGTKTASGVRWYQRMRGLTPDGIVGPKTWA 326


>gi|229821443|ref|YP_002882969.1| hypothetical protein Bcav_2962 [Beutenbergia cavernae DSM 12333]
 gi|229567356|gb|ACQ81207.1| hypothetical protein Bcav_2962 [Beutenbergia cavernae DSM 12333]
          Length = 547

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           R L +G S   V +L+  L+  G +DP    S  FD    SAV     R G  
Sbjct: 167 RSLRVGTSGPDVLQLKAALVALG-IDPGNADSDVFDGATASAVDALYARAGYP 218


>gi|229014342|ref|ZP_04171461.1| Carboxyl-terminal protease [Bacillus mycoides DSM 2048]
 gi|229063831|ref|ZP_04200135.1| Carboxyl-terminal protease [Bacillus cereus AH603]
 gi|229135987|ref|ZP_04264747.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST196]
 gi|229169888|ref|ZP_04297584.1| Carboxyl-terminal protease [Bacillus cereus AH621]
 gi|228613602|gb|EEK70731.1| Carboxyl-terminal protease [Bacillus cereus AH621]
 gi|228647445|gb|EEL03520.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST196]
 gi|228716468|gb|EEL68172.1| Carboxyl-terminal protease [Bacillus cereus AH603]
 gi|228746942|gb|EEL96826.1| Carboxyl-terminal protease [Bacillus mycoides DSM 2048]
          Length = 494

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR------QLQVNL 180
            T EA+   +  +IR      QLQ  L
Sbjct: 463 KTAEAIQTKIIEKIRSGENDLQLQTAL 489


>gi|38638452|ref|NP_943827.1| gp49 [Mycobacterium phage PG1]
 gi|109391895|ref|YP_655145.1| gp49 [Mycobacterium phage Orion]
 gi|33334067|gb|AAQ12126.1| gp49 [Mycobacterium phage PG1]
 gi|88910437|gb|ABD58365.1| gp49 [Mycobacterium phage Orion]
 gi|282721531|gb|ADA83978.1| gp49 [Mycobacterium phage Scoot17C]
          Length = 429

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 104 LGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             N +  V+R++ RL            +   F    E AV+ FQ R  L   G+V  +T 
Sbjct: 365 PRNDADRVRRVQRRLKAAYRSYAGHLEIDGDFGPLTELAVREFQRRSLLIADGIVGPNTA 424

Query: 163 EAM 165
            A+
Sbjct: 425 AAL 427


>gi|163942867|ref|YP_001647751.1| carboxyl-terminal protease [Bacillus weihenstephanensis KBAB4]
 gi|163865064|gb|ABY46123.1| carboxyl-terminal protease [Bacillus weihenstephanensis KBAB4]
          Length = 478

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIR------QLQVNL 180
            T EA+   +  +IR      QLQ  L
Sbjct: 447 KTAEAIQTKIIEKIRSGENDLQLQTAL 473


>gi|255927572|gb|ACU41194.1| gp48 [Mycobacterium phage Colbert]
          Length = 433

 Score = 43.3 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 104 LGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             N +  V+R++ RL            +   F    E AV+ FQ R  L   G+V  +T 
Sbjct: 369 PRNDADRVRRVQRRLKAAYRSYAGHLEIDGDFGPLTELAVREFQRRSLLIADGIVGPNTA 428

Query: 163 EAM 165
            A+
Sbjct: 429 AAL 431


>gi|229173406|ref|ZP_04300950.1| Spore cortex-lytic enzyme [Bacillus cereus MM3]
 gi|228610100|gb|EEK67378.1| Spore cortex-lytic enzyme [Bacillus cereus MM3]
          Length = 259

 Score = 43.3 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G S   V  L+ RL  +G       +   F      A++ FQ + GL   G+  + T
Sbjct: 38  IQRGASGEDVIELQSRLKYNGFYTG--KVDGVFGWGTYWALRNFQGKFGLPVDGLAGAKT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KQML 99


>gi|298527700|ref|ZP_07015104.1| Peptidoglycan-binding domain 1 protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511352|gb|EFI35254.1| Peptidoglycan-binding domain 1 protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 507

 Score = 43.3 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 12/102 (11%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGD 123
            S  P   KE   Q+ K I  ++        PE+ ++  +    S  +Q+++ERL   G 
Sbjct: 412 FSAFPW--KEYTGQSPKWIVLWR--------PEVIVQEFYPDLRSQEIQKIQERLSDLGY 461

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                       +    A+  FQ  + L+ SG     T+  +
Sbjct: 462 Y--RNITDGYLGSATWHALMDFQAAYDLETSGTPTPETIFWL 501


>gi|37520189|ref|NP_923566.1| hypothetical protein gll0620 [Gloeobacter violaceus PCC 7421]
 gi|35211182|dbj|BAC88561.1| gll0620 [Gloeobacter violaceus PCC 7421]
          Length = 424

 Score = 43.3 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 86  QDILSRGGWPELPIRPLHLGN---SSVSVQRLRERLIISGD-----LDPSKGLSVAFDAY 137
           +   ++ GW EL       G    +  +V+ L+ +L+  G            +   F   
Sbjct: 21  RAERAQTGWDELRDAEETQGTFVRNREAVRSLQRQLVFLGYTTGAGPSSGATIDGRFGPG 80

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
            E AV  FQ  HGL   G  D  T +++   V  R  QL
Sbjct: 81  TERAVHTFQREHGLAV-GNFDRKTAQSLVQAVAERATQL 118


>gi|256395924|ref|YP_003117488.1| peptidoglycan-binding protein [Catenulispora acidiphila DSM 44928]
 gi|256362150|gb|ACU75647.1| Peptidoglycan-binding domain 1 protein [Catenulispora acidiphila
           DSM 44928]
          Length = 349

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 5/77 (6%)

Query: 95  PELP--IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P++      L  G++  +V  L+  L   G       ++  +D     AV   Q    + 
Sbjct: 270 PQISPSAGTLQAGDTGPNVSILQTLLDRLGT-PTWVPVTGVYDTRTTDAVAYVQNMLNIT 328

Query: 153 PS--GMVDSSTLEAMNV 167
               G+    T  A+N 
Sbjct: 329 ADPRGVCGPDTASAINT 345


>gi|93278555|pdb|1ZAT|A Chain A, Crystal Structure Of An Enterococcus Faecium Peptidoglycan
           Binding Protein At 2.4 A Resolution
          Length = 250

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 125 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTP 162


>gi|251799692|ref|YP_003014423.1| carboxyl-terminal protease [Paenibacillus sp. JDR-2]
 gi|247547318|gb|ACT04337.1| carboxyl-terminal protease [Paenibacillus sp. JDR-2]
          Length = 486

 Score = 43.3 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 113 RLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++R     L   G    ++     ++A  E AVK FQ   GL  +G +D+ T  ++
Sbjct: 406 QIRNAQVMLSGLGY--ATQREDGYYNASTEQAVKDFQNASGLPVTGEIDTKTAASL 459


>gi|27379486|ref|NP_771015.1| hypothetical protein blr4375 [Bradyrhizobium japonicum USDA 110]
 gi|27352638|dbj|BAC49640.1| blr4375 [Bradyrhizobium japonicum USDA 110]
          Length = 353

 Score = 43.3 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 45/144 (31%)

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG  D+ +P    ++  +  NP               L R +P Y    +   +  +   
Sbjct: 244 VGSEDKPSPSGTLKVTEVSKNP---------------LYRYNPAY----HFKGVRSRK-- 282

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFE 339
                            F   PG  N + +  I   +       H TP P   + + + E
Sbjct: 283 ----------------PFTIKPGPNNPVGTVWINLSAEGYGI--HGTPSP---DKISKAE 321

Query: 340 TSGCVRVRN--IIDLDVWLLKDTP 361
           + GCVR+ N     +   + K TP
Sbjct: 322 SHGCVRLTNWDAERVAGSVAKGTP 345


>gi|317489796|ref|ZP_07948295.1| spore cortex-lytic enzyme [Eggerthella sp. 1_3_56FAA]
 gi|325830265|ref|ZP_08163722.1| peptidoglycan binding domain protein [Eggerthella sp. HGA1]
 gi|316911142|gb|EFV32752.1| spore cortex-lytic enzyme [Eggerthella sp. 1_3_56FAA]
 gi|325487732|gb|EGC90170.1| peptidoglycan binding domain protein [Eggerthella sp. HGA1]
          Length = 301

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 12/82 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W  L      LG+              V  L+  L   G           F A+ E A++
Sbjct: 66  WAALVDASFTLGDRTLYLRMPHFHGHDVLELQHALGALGF--ACGATDGIFGAFTELALR 123

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            FQ+  GL   G+  + T  A+
Sbjct: 124 KFQLNLGLPSDGIAGAYTYAAI 145



 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++  +V+ +++RL+  G LDP+  +  AF      AV+ F    GL  +  V      A+
Sbjct: 11  DTGPAVEDVQQRLVTIGLLDPAD-VDGAFGDTTAEAVQAFCGGAGLPLTDEVTEKVWAAL 69


>gi|257790349|ref|YP_003180955.1| Peptidoglycan-binding domain 1 protein [Eggerthella lenta DSM 2243]
 gi|257474246|gb|ACV54566.1| Peptidoglycan-binding domain 1 protein [Eggerthella lenta DSM 2243]
          Length = 330

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 12/82 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W  L      LG+              V  L+  L   G           F A+ E A++
Sbjct: 95  WAALVDASFTLGDRTLYLRMPHFHGHDVLELQHALGALGF--ACGATDGIFGAFTELALR 152

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            FQ+  GL   G+  + T  A+
Sbjct: 153 KFQLNLGLPSDGIAGAYTYAAI 174



 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++  +V+ +++RL+  G LDP+  +  AF      AV+ F    GL  +  V      A+
Sbjct: 40  DTGPAVEDVQQRLVTIGLLDPAD-VDGAFGDTTAEAVQAFCGGAGLPLTDEVTEKVWAAL 98


>gi|258622292|ref|ZP_05717318.1| VgrG protein [Vibrio mimicus VM573]
 gi|258585616|gb|EEW10339.1| VgrG protein [Vibrio mimicus VM573]
          Length = 1025

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 13/79 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH--------- 149
                 GN+S  V+ L++ LI  G      G    F    ++A++ FQ  +         
Sbjct: 722 ASAYRQGNNSEEVRLLQQALIKLGFDLGKAGADGDFAGKTKTAIEQFQKSYQPSHQTHPS 781

Query: 150 ---GLDPSGMVDSSTLEAM 165
              G    G+V   TL A+
Sbjct: 782 YSIG-PVDGIVGKGTLLAL 799


>gi|238926502|ref|ZP_04658262.1| 3D domain protein [Selenomonas flueggei ATCC 43531]
 gi|238885696|gb|EEQ49334.1| 3D domain protein [Selenomonas flueggei ATCC 43531]
          Length = 269

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +V+ ++E LI SG L  +             A++  Q  H L   G+   +T 
Sbjct: 92  KEGMRGGAVRHVQELLIQSGYLAGAADGIAG--PLTREAIERCQADHQLVVDGICGEATY 149

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQ--KMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
             ++   D     L +   R      Q  + G R V V+  A S  A + G     S   
Sbjct: 150 HVLSGGADYDPAALGIVDERA----PQVSRGGGRSVYVSATAYS--AYDPGN---SSRTA 200

Query: 221 VGRVDR 226
            G + R
Sbjct: 201 TGTLVR 206


>gi|261366638|ref|ZP_05979521.1| penicillin-resistant DD-carboxypeptidase [Subdoligranulum variabile
           DSM 15176]
 gi|282571457|gb|EFB76992.1| penicillin-resistant DD-carboxypeptidase [Subdoligranulum variabile
           DSM 15176]
          Length = 229

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 7/66 (10%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G+P +       G+ +  V  L++ L   G   PS  L   F +  ESA+K  Q    L 
Sbjct: 148 GYPTV-----RRGSRNTYVLILQDALNALGY--PSGSLDGVFGSATESALKAIQKDFSLT 200

Query: 153 PSGMVD 158
             G+  
Sbjct: 201 ADGVCG 206


>gi|158314338|ref|YP_001506846.1| peptidoglycan binding domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158109743|gb|ABW11940.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EAN1pec]
          Length = 256

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 5/62 (8%)

Query: 102 LHLGNSSVS--VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + LG   V   V  +++RL   G      G    F       V  FQ ++GL P G+V  
Sbjct: 192 MRLGVEGVRWDVALVQKRLADIGYPITVDG---RFGPQTNHMVVDFQKKNGLVPDGVVGP 248

Query: 160 ST 161
            T
Sbjct: 249 LT 250


>gi|206600340|ref|YP_002241360.1| gp50 [Mycobacterium phage Chah]
 gi|206287428|gb|ACI12770.1| gp50 [Mycobacterium phage Chah]
 gi|282721427|gb|ADA83875.1| gp49 [Mycobacterium phage Fang]
          Length = 438

 Score = 43.3 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 104 LGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             N +  V+R++ RL            +   F    E AV+ FQ R  L   G+V  +T 
Sbjct: 374 PRNDADRVRRVQRRLKAAYRSYAGHLEIDGDFGPLTELAVREFQRRSLLIADGIVGPNTA 433

Query: 163 EAM 165
            A+
Sbjct: 434 AAL 436


>gi|153212843|ref|ZP_01948460.1| VgrG protein [Vibrio cholerae 1587]
 gi|124116221|gb|EAY35041.1| VgrG protein [Vibrio cholerae 1587]
          Length = 1039

 Score = 43.3 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 30/147 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           I  + L  ++  S ++  ND         +  + SD+   S E     ++  + Y+    
Sbjct: 673 IDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQ--- 729

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH- 149
                         GN S  V+ L+E LI  G      G    F    ++A++ FQ  + 
Sbjct: 730 --------------GNHSDEVKLLQEALIKLGFDLGKAGADGDFGGKTKTAIEQFQKSYQ 775

Query: 150 -----------GLDPSGMVDSSTLEAM 165
                      G    G+V + TL A+
Sbjct: 776 PSHQTHPSYSIG-PVDGIVGNGTLLAL 801


>gi|77164193|ref|YP_342718.1| peptidoglycan binding domain-containing protein [Nitrosococcus
           oceani ATCC 19707]
 gi|76882507|gb|ABA57188.1| Peptidoglycan-binding domain 1 [Nitrosococcus oceani ATCC 19707]
          Length = 465

 Score = 43.3 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +V  ++ RL   G    +      F     SA++ FQ  + +   G+   S L  +N 
Sbjct: 229 DATVLAIQRRLNELGY--NAGTPDGLFGNKTRSAIQAFQRDNAVATDGVASRSLLSQLNA 286

Query: 168 P 168
            
Sbjct: 287 S 287


>gi|255928510|gb|ACU42125.1| gp48 [Mycobacterium phage UncleHowie]
          Length = 438

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 104 LGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             N +  V+R++ RL            +   F    E AV+ FQ R  L   G+V  +T 
Sbjct: 374 PRNDADRVRRVQRRLKAAYRSYAGHLEIDGDFGPLTELAVREFQRRSLLIADGIVGPNTA 433

Query: 163 EAM 165
            A+
Sbjct: 434 AAL 436


>gi|164687688|ref|ZP_02211716.1| hypothetical protein CLOBAR_01330 [Clostridium bartlettii DSM
           16795]
 gi|164603462|gb|EDQ96927.1| hypothetical protein CLOBAR_01330 [Clostridium bartlettii DSM
           16795]
          Length = 424

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 101 PLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            L +G+    V+ ++ +L  IS      P       +      AV+ FQ   GL  +G+V
Sbjct: 340 TLEIGSEGTPVRTIQNQLNAISNSYPAIPKVAEDGIYGPSTAEAVRTFQKIFGLPQTGVV 399

Query: 158 DSSTLEAM 165
           D  T   +
Sbjct: 400 DFKTWYEI 407


>gi|149241998|pdb|2HKL|A Chain A, Crystal Structure Of Enterococcus Faecium L,D-
           Transpeptidase C442s Mutant
 gi|149241999|pdb|2HKL|B Chain B, Crystal Structure Of Enterococcus Faecium L,D-
           Transpeptidase C442s Mutant
 gi|149242000|pdb|2HKL|C Chain C, Crystal Structure Of Enterococcus Faecium L,D-
           Transpeptidase C442s Mutant
          Length = 250

 Score = 42.9 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
              Y+ V++    +   ++GKV L + ++ G+    TP
Sbjct: 125 EDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTP 162


>gi|114567247|ref|YP_754401.1| C-terminal processing peptidase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114338182|gb|ABI69030.1| C-terminal processing peptidase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 497

 Score = 42.9 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 13/94 (13%)

Query: 92  GGWPELPIRPLH------LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
            GW    + PL       L +SS+ V    + L  SG         +  D    +A+K F
Sbjct: 395 NGWEISNLMPLEKSGKPALNSSSLEVYNAEKILSASGY--ELDKPDMTLDIKTFNAIKKF 452

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           Q    L PSG++D +T EA+N     R RQ  +N
Sbjct: 453 QQEQRLYPSGILDFTTQEALN-----RKRQELIN 481


>gi|320107055|ref|YP_004182645.1| peptidoglycan-binding domain 1 protein [Terriglobus saanensis
           SP1PR4]
 gi|319925576|gb|ADV82651.1| Peptidoglycan-binding domain 1 protein [Terriglobus saanensis
           SP1PR4]
          Length = 262

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 9/76 (11%)

Query: 97  LPIRPLHLGNSSV-SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR----HG- 150
            P   +  G+++  +V  +++RL+I G       +   + A    AV+ FQ R    +G 
Sbjct: 6   FPGTTIMAGSTNKEAVTAIQKRLVIVG--CGPVDVDGKYGAETAGAVEHFQARSVDSNGT 63

Query: 151 -LDPSGMVDSSTLEAM 165
            L   G V  +T   +
Sbjct: 64  PLLIDGKVGPTTWAVL 79


>gi|257871347|ref|ZP_05651000.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus gallinarum EG2]
 gi|257805511|gb|EEV34333.1| ErfK/YbiS/YcfS/YnhG family protein [Enterococcus gallinarum EG2]
          Length = 465

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            G  Y+ V++    +   ++G V L + +I G+    TP
Sbjct: 344 FGNTYIEVDLKNQHMWYYKDGAVALETDIISGKPKSPTP 382


>gi|225016924|ref|ZP_03706116.1| hypothetical protein CLOSTMETH_00837 [Clostridium methylpentosum
           DSM 5476]
 gi|224950318|gb|EEG31527.1| hypothetical protein CLOSTMETH_00837 [Clostridium methylpentosum
           DSM 5476]
          Length = 146

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G     VQ+LR  + I     P +      D   + A+  FQ+ + L P G++D  T  
Sbjct: 59  IGAEVRPVQQLRAVINIPDGQIPVRIQDRIVDQNRKDALTTFQLWYALVPDGVLDRETWN 118

Query: 164 AMNVPVD 170
            +N P  
Sbjct: 119 KINEPPS 125


>gi|218133257|ref|ZP_03462061.1| hypothetical protein BACPEC_01122 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992130|gb|EEC58134.1| hypothetical protein BACPEC_01122 [Bacteroides pectinophilus ATCC
           43243]
          Length = 417

 Score = 42.9 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L + G+   S  +      +      AV+ FQ    L  +
Sbjct: 333 PGSNLDIGSSGSKVRQIQEQLNLIGEFYSSIPVLIPDGIYGERTADAVRAFQKIFRLPQT 392

Query: 155 GMVDSSTLE 163
           G+VD  T  
Sbjct: 393 GIVDYPTWY 401


>gi|148242142|ref|YP_001227299.1| hypothetical protein SynRCC307_1043 [Synechococcus sp. RCC307]
 gi|147850452|emb|CAK27946.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
          Length = 165

 Score = 42.9 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            L  ++NG+      V VGR    TP+   R++R+  +P W  P  
Sbjct: 32  QLRVIQNGRQIASYPVAVGRATNPTPLGTHRVHRLEKDPIWSSPWR 77


>gi|114797087|ref|YP_759395.1| putative localization factor protein PodJ [Hyphomonas neptunium ATCC
            15444]
 gi|114737261|gb|ABI75386.1| putative localization factor protein PodJ [Hyphomonas neptunium ATCC
            15444]
          Length = 1238

 Score = 42.9 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
             VQ ++  L   G L           A   +A++ +Q   GL  SG V    ++ +N   
Sbjct: 1176 QVQAVQTALSRLGYLSGEADG--VLGAQTANAIRDYQRNEGLSVSGTVTPELIDRLNTGA 1233

Query: 170  DLR 172
              R
Sbjct: 1234 SNR 1236


>gi|253578488|ref|ZP_04855760.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850806|gb|EES78764.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 521

 Score = 42.9 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 41/171 (23%), Gaps = 58/171 (33%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR---VDRQTPILHSRINRIMFNPYWV 245
             +G  Y+ V++    +   +NG+    S ++ G     DRQTP     I          
Sbjct: 388 NDIGNTYIEVDLSEQHMYFYQNGEDIFESDIVSGDMRYSDRQTPAGIYTIYY-------- 439

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
                         ++ P  L+                            + + Q     
Sbjct: 440 --------------KKSPDVLRGK--------------------QLANGKYEYEQP---- 461

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFN--NVVRFETSGCVRV--RNIIDL 352
                             HD      F     +   + GC+ +      +L
Sbjct: 462 -----VTYWMPFNGGIGFHDANWQPYFGGDRFMEGGSHGCINMPPEKAAEL 507


>gi|114776543|ref|ZP_01451588.1| hypothetical protein SPV1_02447 [Mariprofundus ferrooxydans PV-1]
 gi|114553373|gb|EAU55771.1| hypothetical protein SPV1_02447 [Mariprofundus ferrooxydans PV-1]
          Length = 118

 Score = 42.9 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                +  L+E L   G   P +     F  +   A+K  Q +HGL PSG VD
Sbjct: 1   MRGKRIALLQEILYRKGY--PMQDQKGVFGVHTRDAIKDIQKQHGLKPSGQVD 51


>gi|116621255|ref|YP_823411.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224417|gb|ABJ83126.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 317

 Score = 42.9 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 8/64 (12%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLL 357
            PG  N +    I+    +  Y +H TPEP     +   E+ GC+R+ N   ++L   + 
Sbjct: 254 PPGPNNPVGLVWIDLSKEH--YGIHGTPEPG---KIGHTESHGCIRLTNWDALELAAMVR 308

Query: 358 KDTP 361
             TP
Sbjct: 309 PGTP 312



 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L  G     V R  + L+        + +  +F   ++ AV  FQ    +  SG VD+
Sbjct: 32  GDLAQGAKGAGVVR-AQILLARAHFSCGE-IDGSFGTNLQKAVMAFQNDRKIPASGTVDA 89

Query: 160 STLEAMNVPVD 170
           +T  A+N    
Sbjct: 90  ATWGALNSDAA 100


>gi|56478199|ref|YP_159788.1| putative peptidoglycan-binding protein [Aromatoleum aromaticum
           EbN1]
 gi|56314242|emb|CAI08887.1| putative peptidoglycan-binding protein [Aromatoleum aromaticum
           EbN1]
          Length = 401

 Score = 42.9 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 34/114 (29%), Gaps = 22/114 (19%)

Query: 69  IISKETIAQTEKAIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRER-----L 118
           + S         AIA   D L  G      WP               + R+  R     L
Sbjct: 300 LYSYNAAESYALAIAHLSDRLRGGEPFRASWPT----------DDPGLSRVERREVQTLL 349

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
              G    +     A  A   +AV+ FQ   GL+P G      LE +      R
Sbjct: 350 SQLGY--DAGEADGALGARSRAAVQQFQRGQGLEPDGRAGRQVLELLRKAYAER 401


>gi|149179709|ref|ZP_01858214.1| hypothetical protein BSG1_01800 [Bacillus sp. SG-1]
 gi|148851901|gb|EDL66046.1| hypothetical protein BSG1_01800 [Bacillus sp. SG-1]
          Length = 490

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P + L   + S  V+   E L   G           +D     AV+ FQ   GL+ +G +
Sbjct: 398 PDKELKESDLSDQVKAAEEMLKAGGYNPGKADG--FYDEQTTEAVRAFQEEEGLEVTGNL 455

Query: 158 DSSTLEAM 165
           +S ++  +
Sbjct: 456 NSESILKL 463


>gi|255552736|ref|XP_002517411.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
 gi|223543422|gb|EEF44953.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
          Length = 311

 Score = 42.9 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           H G++   +  L++ L   G L     S      FD  +E A+K +Q  + L+ +G +DS
Sbjct: 48  HKGDNLKGIHDLKKYLENFGYLSYKNQSHSNDDDFDDLLEYALKTYQFNYHLNVTGFLDS 107

Query: 160 STLEAMNVP 168
            T+  M +P
Sbjct: 108 ETVTKMMMP 116


>gi|309776324|ref|ZP_07671312.1| N-acetylmuramoyl-L-alanine amidase [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308915920|gb|EFP61672.1| N-acetylmuramoyl-L-alanine amidase [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 226

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 7/80 (8%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             Y       G+P      L  G+  V V  L++ L   G    ++ L   F     SA+
Sbjct: 135 KRYGTPACSAGFPV-----LRNGSRGVYVLILQDALNALGY--STRTLDGVFGNNTRSAL 187

Query: 143 KLFQMRHGLDPSGMVDSSTL 162
             +Q  +GL   G+    T 
Sbjct: 188 VAYQRENGLSADGVAGCGTW 207


>gi|326942971|gb|AEA18867.1| carboxyl-terminal protease [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 478

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 447 KTAEAIQTKIIEKIR 461


>gi|330799115|ref|XP_003287593.1| hypothetical protein DICPUDRAFT_47448 [Dictyostelium purpureum]
 gi|325082379|gb|EGC35862.1| hypothetical protein DICPUDRAFT_47448 [Dictyostelium purpureum]
          Length = 772

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 99  IRPLHLG----NSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDP 153
           +  L  G    ++  +V  L   L   G LD     +   + +  E AVK FQ  + L  
Sbjct: 318 VESLKEGLKGTSTGEAVSLLNYSLYSIGCLDEYNHSTREIYTSTTEYAVKKFQEENNLPS 377

Query: 154 SGMVDSSTLE 163
           +G+ D +T+ 
Sbjct: 378 TGVADFNTIR 387


>gi|300856168|ref|YP_003781152.1| putative cell wall hydrolase [Clostridium ljungdahlii DSM 13528]
 gi|300436283|gb|ADK16050.1| putative cell wall hydrolase [Clostridium ljungdahlii DSM 13528]
          Length = 306

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE- 163
           G+ S  V  ++++L   G L  +    + +D     AV   Q        G++   T   
Sbjct: 243 GHKSHVVLWIQQKLEQYGYLKKNSYTPMVYDEATFQAVTNLQKNWRKATDGILGPDTWSI 302

Query: 164 AMN 166
            +N
Sbjct: 303 FLN 305


>gi|228903654|ref|ZP_04067774.1| Carboxyl-terminal protease [Bacillus thuringiensis IBL 4222]
 gi|228911008|ref|ZP_04074816.1| Carboxyl-terminal protease [Bacillus thuringiensis IBL 200]
 gi|228848663|gb|EEM93509.1| Carboxyl-terminal protease [Bacillus thuringiensis IBL 200]
 gi|228855922|gb|EEN00462.1| Carboxyl-terminal protease [Bacillus thuringiensis IBL 4222]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|228961408|ref|ZP_04123022.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228798293|gb|EEM45292.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|228942316|ref|ZP_04104855.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975245|ref|ZP_04135803.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981883|ref|ZP_04142178.1| Carboxyl-terminal protease [Bacillus thuringiensis Bt407]
 gi|228777995|gb|EEM26267.1| Carboxyl-terminal protease [Bacillus thuringiensis Bt407]
 gi|228784524|gb|EEM32545.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817360|gb|EEM63446.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|229032797|ref|ZP_04188754.1| Carboxyl-terminal protease [Bacillus cereus AH1271]
 gi|228728526|gb|EEL79545.1| Carboxyl-terminal protease [Bacillus cereus AH1271]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|229112588|ref|ZP_04242125.1| Carboxyl-terminal protease [Bacillus cereus Rock1-15]
 gi|229130426|ref|ZP_04259383.1| Carboxyl-terminal protease [Bacillus cereus BDRD-Cer4]
 gi|228653021|gb|EEL08902.1| Carboxyl-terminal protease [Bacillus cereus BDRD-Cer4]
 gi|228670968|gb|EEL26275.1| Carboxyl-terminal protease [Bacillus cereus Rock1-15]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|229164119|ref|ZP_04292055.1| Carboxyl-terminal protease [Bacillus cereus R309803]
 gi|228619355|gb|EEK76245.1| Carboxyl-terminal protease [Bacillus cereus R309803]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|228923905|ref|ZP_04087182.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228955418|ref|ZP_04117423.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229050841|ref|ZP_04194393.1| Carboxyl-terminal protease [Bacillus cereus AH676]
 gi|229072627|ref|ZP_04205829.1| Carboxyl-terminal protease [Bacillus cereus F65185]
 gi|229082386|ref|ZP_04214849.1| Carboxyl-terminal protease [Bacillus cereus Rock4-2]
 gi|229147705|ref|ZP_04276048.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST24]
 gi|229153335|ref|ZP_04281513.1| Carboxyl-terminal protease [Bacillus cereus m1550]
 gi|229181435|ref|ZP_04308763.1| Carboxyl-terminal protease [Bacillus cereus 172560W]
 gi|228602010|gb|EEK59503.1| Carboxyl-terminal protease [Bacillus cereus 172560W]
 gi|228629939|gb|EEK86590.1| Carboxyl-terminal protease [Bacillus cereus m1550]
 gi|228635718|gb|EEK92205.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST24]
 gi|228700818|gb|EEL53341.1| Carboxyl-terminal protease [Bacillus cereus Rock4-2]
 gi|228710603|gb|EEL62576.1| Carboxyl-terminal protease [Bacillus cereus F65185]
 gi|228722497|gb|EEL73890.1| Carboxyl-terminal protease [Bacillus cereus AH676]
 gi|228804210|gb|EEM50824.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228835704|gb|EEM81068.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|229193421|ref|ZP_04320369.1| Carboxyl-terminal protease [Bacillus cereus ATCC 10876]
 gi|228590076|gb|EEK47947.1| Carboxyl-terminal protease [Bacillus cereus ATCC 10876]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|218900302|ref|YP_002448713.1| carboxyl-terminal protease [Bacillus cereus G9842]
 gi|218545542|gb|ACK97936.1| carboxyl-terminal protease [Bacillus cereus G9842]
          Length = 478

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 447 KTAEAIQTKIIEKIR 461


>gi|206970036|ref|ZP_03230989.1| carboxyl-terminal protease [Bacillus cereus AH1134]
 gi|218233322|ref|YP_002369956.1| carboxyl-terminal protease [Bacillus cereus B4264]
 gi|296505596|ref|YP_003667296.1| carboxyl-terminal protease [Bacillus thuringiensis BMB171]
 gi|206734613|gb|EDZ51782.1| carboxyl-terminal protease [Bacillus cereus AH1134]
 gi|218161279|gb|ACK61271.1| carboxyl-terminal protease [Bacillus cereus B4264]
 gi|296326648|gb|ADH09576.1| carboxyl-terminal protease [Bacillus thuringiensis BMB171]
          Length = 478

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 447 KTAEAIQTKIIEKIR 461


>gi|30023217|ref|NP_834848.1| carboxyl-terminal protease [Bacillus cereus ATCC 14579]
 gi|29898777|gb|AAP12049.1| Tail-specific protease [Bacillus cereus ATCC 14579]
          Length = 478

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 447 KTAEAIQTKIIEKIR 461


>gi|75759022|ref|ZP_00739130.1| Tail-specific protease [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74493488|gb|EAO56596.1| Tail-specific protease [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 127

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 38  KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 95

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 96  KTAEAIQTKIIEKIR 110


>gi|47564877|ref|ZP_00235921.1| putative peptidoglycan binding domain protein [Bacillus cereus
           G9241]
 gi|47558250|gb|EAL16574.1| putative peptidoglycan binding domain protein [Bacillus cereus
           G9241]
          Length = 741

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+S   V   +  L  +G    S   S  ++  VESAVK FQ    L   G+ + ST
Sbjct: 221 LKVGSSGRFVTLFQYALYFNG--HDSGSFSTTYNTNVESAVKKFQGFTLLPQDGVANKST 278

Query: 162 -LEAM 165
            L A+
Sbjct: 279 WLSAL 283


>gi|269127230|ref|YP_003300600.1| ErfK/YbiS/YcfS/YnhG family protein [Thermomonospora curvata DSM
           43183]
 gi|268312188|gb|ACY98562.1| ErfK/YbiS/YcfS/YnhG family protein [Thermomonospora curvata DSM
           43183]
          Length = 243

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 39/122 (31%), Gaps = 15/122 (12%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+ RL   G       +   +    + AV  FQ  + +  S  V      A
Sbjct: 58  GARGEHVKALQRRLKELGYAPG--PIDGRYGNLTQMAVWAFQKVNRIKVSDTVGERMWAA 115

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +  P   R              + ++     V V++    L   + G+  L S +  G  
Sbjct: 116 LENPKAPRP-------------VSKRREPERVDVDLRRQYLVVYKAGRPVLISHISSGSG 162

Query: 225 DR 226
           + 
Sbjct: 163 EH 164


>gi|255928268|gb|ACU41885.1| gp48 [Mycobacterium phage Puhltonio]
          Length = 438

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 104 LGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             N +  V+R++ RL            +   F    E AV+ FQ R  L   G+V  +T 
Sbjct: 374 PRNDADRVRRVQRRLKAAYRSYAGHLEIDGDFGPLTELAVREFQRRSLLIADGIVGPNTA 433

Query: 163 EAM 165
            A+
Sbjct: 434 AAL 436


>gi|161507774|ref|YP_001577738.1| hypothetical protein lhv_1466 [Lactobacillus helveticus DPC 4571]
 gi|160348763|gb|ABX27437.1| hypothetical protein lhv_1466 [Lactobacillus helveticus DPC 4571]
          Length = 265

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             ++    +AVK FQ RHGL  +G V+  T + M      
Sbjct: 79  NYYNQATYNAVKNFQRRHGLKATGNVNLKTWQKMGFSKKS 118


>gi|149640756|ref|XP_001508107.1| PREDICTED: similar to membrane-type matrix metalloproteinase 2
           [Ornithorhynchus anatinus]
          Length = 920

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 15/125 (12%)

Query: 95  PELPIRPLHLGNSSVSVQRLRER--------LIISGDLD-PSKGLSVAFDAY-VESAVKL 144
           P  P R      S+ +V    +R        L + G L  PS+ +S    A  + SA+  
Sbjct: 399 PVGPSRSQSPRASTPTVLATSKRPDTPELSWLRLYGYLPQPSRQMSTMRSAQILASAISE 458

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVP----VDLRIRQLQVNLMRIKK-LLEQKMGLRYVLVN 199
            Q  +G+  +G++D  T + M  P     D    +++ N+ R +  L  +K   R +  +
Sbjct: 459 MQRFYGITVTGVLDEETKDWMKRPRCGVPDQFGVRVKANMRRKRYALTGRKWNHRQLTFS 518

Query: 200 IPAAS 204
           I   +
Sbjct: 519 IQNYT 523


>gi|268610247|ref|ZP_06143974.1| hypothetical protein RflaF_12199 [Ruminococcus flavefaciens FD-1]
          Length = 367

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL  G+    V  L+E L  +        +   F A  E AV  FQ +HGL  +G  D+ 
Sbjct: 46  PLARGSKGEDVCWLQESLNQA--CGADLVVDDTFGAKTEEAVLNFQKQHGLPETGQADTH 103

Query: 161 TLEAM 165
           T+E +
Sbjct: 104 TIETL 108


>gi|238917193|ref|YP_002930710.1| hypothetical protein EUBELI_01266 [Eubacterium eligens ATCC 27750]
 gi|238872553|gb|ACR72263.1| Hypothetical protein EUBELI_01266 [Eubacterium eligens ATCC 27750]
          Length = 419

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++L+E+L + G+     P       +     +AVK FQ    L  S
Sbjct: 336 PGTNLDIGSSGQKVRQLQEQLNLIGEYYNSIPVLSTDGIYGEQTAAAVKEFQRIFNLPQS 395

Query: 155 GMVDSSTL 162
           G+ D  T 
Sbjct: 396 GITDFPTW 403


>gi|316933177|ref|YP_004108159.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris DX-1]
 gi|315600891|gb|ADU43426.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris DX-1]
          Length = 288

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 15/100 (15%)

Query: 86  QDILSRG--GWPE----LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           + + + G   W E    +P   L  G     V+ +++ L   G   P   +S ++D    
Sbjct: 187 RSLAASGVGLWVEPARIVPGPALKQGTEGEEVRLMQQALADYGYRVP---VSGSYDHATA 243

Query: 140 SAVKLFQMRHGL-DPSGMVDSSTLEAM-----NVPVDLRI 173
             V  FQ         G+ D+STL  +      +PV+ R 
Sbjct: 244 DVVTAFQRHFRPEKVDGIADASTLATLHALLARLPVEARA 283


>gi|256004227|ref|ZP_05429210.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           2360]
 gi|255991817|gb|EEU01916.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           2360]
 gi|316939606|gb|ADU73640.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           1313]
          Length = 289

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
                   ++V+I A +L    +G++     V  G+    TP     I     NP
Sbjct: 176 PVAPSSVRIIVSIAAKTLSLYRDGRLVKSYPVATGKPTTPTPRGTFTIINKQVNP 230


>gi|226952587|ref|ZP_03823051.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
 gi|294649883|ref|ZP_06727283.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|226836667|gb|EEH69050.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
 gi|292824257|gb|EFF83060.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 412

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 87/248 (35%), Gaps = 54/248 (21%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            A+  FQ  +GL P+G +   T +A+ V    +   ++  +       E  +   Y   +
Sbjct: 164 KAIASFQQMNGLTPTGQLTKETWDAL-VAKQTKPAYVEYTI------TEADLKGPYAE-S 215

Query: 200 IP-AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV---IPRSIIQKDM 255
           IP   +L+A   G    R T ++G        +  R  R   NP      +   I+  ++
Sbjct: 216 IPTDYALQAKMKGLYYTRVTEMLGEKFH----MDERFLR-QLNPRANFNKVGEKIVVANV 270

Query: 256 MALLRQDPQYLKDN----NIHMIDEKGKEV--FVEEV--------------------DWN 289
              L +D   +  +     +++ + + + +  F   +                     W 
Sbjct: 271 RNDLPEDIHLIVAHKGAKQLYLFNSRNQMIASFPATIGSTSTPSPTGTYKVTGVAKNPWY 330

Query: 290 SPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
           S  P NF            PG    + +  I   S+ +  +H TP P + +      + G
Sbjct: 331 SYSPSNFVQGKNLKPLSLPPGPNGPVGNIWIGL-SKKSFGIHGTPNPSMISKNA---SHG 386

Query: 343 CVRVRNII 350
           C+R+ N  
Sbjct: 387 CIRLTNWD 394


>gi|297545248|ref|YP_003677550.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296843023|gb|ADH61539.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 420

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               R L+ G     V+ L+  L  +G    +  +   F     + V  FQ    L P G
Sbjct: 36  TFGSRLLYSGTYGTDVKELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDG 93

Query: 156 MVDSSTLEAM 165
           +V   T   +
Sbjct: 94  IVGPKTYAVL 103


>gi|226530405|ref|NP_001147545.1| peptidoglycan binding domain containing protein [Zea mays]
 gi|195612094|gb|ACG27877.1| peptidoglycan binding domain containing protein [Zea mays]
          Length = 342

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R L  G     V+ ++E L   G     + +   +F +  E AVK +Q   G   +G++ 
Sbjct: 137 RTLRTGAEGEDVRAMQEALQKLGFYSGEEDMEYSSFSSGTERAVKTWQATVGASENGVMT 196

Query: 159 SSTLEAM 165
           S  LE +
Sbjct: 197 SELLEWL 203


>gi|229514626|ref|ZP_04404087.1| VgrG protein [Vibrio cholerae TMA 21]
 gi|229348606|gb|EEO13564.1| VgrG protein [Vibrio cholerae TMA 21]
          Length = 1025

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 13/79 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH--------- 149
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 150 ---GLDPSGMVDSSTLEAM 165
              G    G+V   TL A+
Sbjct: 782 YSIG-AVDGIVGKGTLLAL 799


>gi|281419482|ref|ZP_06250496.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
 gi|281406888|gb|EFB37152.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
          Length = 289

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
                   ++V+I A +L    +G++     V  G+    TP     I     NP
Sbjct: 176 PVAPSSVRIIVSIAAKTLSLYRDGRLVKSYPVATGKPTTPTPRGTFTIINKQVNP 230


>gi|301056644|ref|YP_003794855.1| carboxyl-terminal protease [Bacillus anthracis CI]
 gi|300378813|gb|ADK07717.1| carboxyl-terminal protease [Bacillus cereus biovar anthracis str.
           CI]
          Length = 478

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 447 KTAEAIQTKIIEKIR 461


>gi|254724391|ref|ZP_05186175.1| carboxyl-terminal protease [Bacillus anthracis str. A1055]
          Length = 465

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 376 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 433

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 434 KTAEAIQTKIIEKIR 448


>gi|228936468|ref|ZP_04099266.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823300|gb|EEM69134.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|228948900|ref|ZP_04111173.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228810656|gb|EEM57004.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|229158746|ref|ZP_04286804.1| Carboxyl-terminal protease [Bacillus cereus ATCC 4342]
 gi|228624730|gb|EEK81499.1| Carboxyl-terminal protease [Bacillus cereus ATCC 4342]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|229187391|ref|ZP_04314534.1| Carboxyl-terminal protease [Bacillus cereus BGSC 6E1]
 gi|228596095|gb|EEK53772.1| Carboxyl-terminal protease [Bacillus cereus BGSC 6E1]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|229141909|ref|ZP_04270435.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST26]
 gi|229199298|ref|ZP_04325965.1| Carboxyl-terminal protease [Bacillus cereus m1293]
 gi|228584158|gb|EEK42309.1| Carboxyl-terminal protease [Bacillus cereus m1293]
 gi|228641524|gb|EEK97829.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST26]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|222098636|ref|YP_002532694.1| carboxyl-terminal protease [Bacillus cereus Q1]
 gi|221242695|gb|ACM15405.1| carboxyl-terminal protease [Bacillus cereus Q1]
          Length = 469

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 380 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 437

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 438 KTAEAIQTKIIEKIR 452


>gi|206976835|ref|ZP_03237738.1| carboxyl- protease [Bacillus cereus H3081.97]
 gi|217962662|ref|YP_002341236.1| carboxyl-terminal protease [Bacillus cereus AH187]
 gi|206744970|gb|EDZ56374.1| carboxyl- protease [Bacillus cereus H3081.97]
 gi|217066361|gb|ACJ80611.1| carboxyl-terminal protease [Bacillus cereus AH187]
 gi|324329123|gb|ADY24383.1| carboxyl-terminal protease [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 478

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 447 KTAEAIQTKIIEKIR 461


>gi|147768133|emb|CAN60606.1| hypothetical protein VITISV_020065 [Vitis vinifera]
          Length = 260

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+    +Q++++ L   G +  +      S  F+  +ES++K FQ  + L+ +G +D+
Sbjct: 52  KKGDKREGIQKVKQYLQRYGYISSTHYSQMGSDDFNDALESSLKAFQTFYHLNSTGTLDA 111

Query: 160 STLEAMNVP 168
           +T   M+ P
Sbjct: 112 ATATLMSRP 120


>gi|118480221|ref|YP_897372.1| carboxyl-terminal protease [Bacillus thuringiensis str. Al Hakam]
 gi|118419446|gb|ABK87865.1| carboxyl-terminal protease [Bacillus thuringiensis str. Al Hakam]
          Length = 495

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 406 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 463

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 464 KTAEAIQTKIIEKIR 478


>gi|49188018|ref|YP_031271.1| carboxyl-terminal protease [Bacillus anthracis str. Sterne]
 gi|49480386|ref|YP_039171.1| carboxyl-terminal protease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|165869894|ref|ZP_02214551.1| carboxyl-terminal protease [Bacillus anthracis str. A0488]
 gi|167635276|ref|ZP_02393591.1| carboxyl-terminal protease [Bacillus anthracis str. A0442]
 gi|167640531|ref|ZP_02398794.1| carboxyl-terminal protease [Bacillus anthracis str. A0193]
 gi|170687936|ref|ZP_02879149.1| carboxyl-terminal protease [Bacillus anthracis str. A0465]
 gi|170707750|ref|ZP_02898201.1| carboxyl-terminal protease [Bacillus anthracis str. A0389]
 gi|177653015|ref|ZP_02935342.1| carboxyl-terminal protease [Bacillus anthracis str. A0174]
 gi|190567669|ref|ZP_03020581.1| carboxyl-terminal protease [Bacillus anthracis Tsiankovskii-I]
 gi|196032931|ref|ZP_03100344.1| carboxyl-terminal protease [Bacillus cereus W]
 gi|196039446|ref|ZP_03106751.1| carboxyl-terminal protease [Bacillus cereus NVH0597-99]
 gi|196045752|ref|ZP_03112982.1| carboxyl-terminal protease [Bacillus cereus 03BB108]
 gi|218906357|ref|YP_002454191.1| carboxyl-terminal protease [Bacillus cereus AH820]
 gi|225867145|ref|YP_002752523.1| carboxyl-terminal protease [Bacillus cereus 03BB102]
 gi|227817942|ref|YP_002817951.1| carboxyl-terminal protease [Bacillus anthracis str. CDC 684]
 gi|229602027|ref|YP_002869401.1| carboxyl-terminal protease [Bacillus anthracis str. A0248]
 gi|254686392|ref|ZP_05150251.1| carboxyl-terminal protease [Bacillus anthracis str. CNEVA-9066]
 gi|254735597|ref|ZP_05193304.1| carboxyl-terminal protease [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744315|ref|ZP_05201995.1| carboxyl-terminal protease [Bacillus anthracis str. Kruger B]
 gi|254755613|ref|ZP_05207646.1| carboxyl-terminal protease [Bacillus anthracis str. Vollum]
 gi|254757068|ref|ZP_05209096.1| carboxyl-terminal protease [Bacillus anthracis str. Australia 94]
 gi|49181945|gb|AAT57321.1| carboxyl-terminal protease [Bacillus anthracis str. Sterne]
 gi|49331942|gb|AAT62588.1| carboxyl-terminal protease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|164714217|gb|EDR19737.1| carboxyl-terminal protease [Bacillus anthracis str. A0488]
 gi|167511574|gb|EDR86957.1| carboxyl-terminal protease [Bacillus anthracis str. A0193]
 gi|167529319|gb|EDR92071.1| carboxyl-terminal protease [Bacillus anthracis str. A0442]
 gi|170127307|gb|EDS96183.1| carboxyl-terminal protease [Bacillus anthracis str. A0389]
 gi|170668045|gb|EDT18795.1| carboxyl-terminal protease [Bacillus anthracis str. A0465]
 gi|172081790|gb|EDT66860.1| carboxyl-terminal protease [Bacillus anthracis str. A0174]
 gi|190561085|gb|EDV15058.1| carboxyl-terminal protease [Bacillus anthracis Tsiankovskii-I]
 gi|195994360|gb|EDX58315.1| carboxyl-terminal protease [Bacillus cereus W]
 gi|196023583|gb|EDX62260.1| carboxyl-terminal protease [Bacillus cereus 03BB108]
 gi|196029606|gb|EDX68208.1| carboxyl-terminal protease [Bacillus cereus NVH0597-99]
 gi|218535514|gb|ACK87912.1| carboxyl-terminal protease [Bacillus cereus AH820]
 gi|225788534|gb|ACO28751.1| carboxyl-terminal protease [Bacillus cereus 03BB102]
 gi|227003396|gb|ACP13139.1| carboxyl-terminal protease [Bacillus anthracis str. CDC 684]
 gi|229266435|gb|ACQ48072.1| carboxyl-terminal protease [Bacillus anthracis str. A0248]
          Length = 478

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 447 KTAEAIQTKIIEKIR 461


>gi|52140383|ref|YP_086447.1| carboxyl-terminal protease [Bacillus cereus E33L]
 gi|51973852|gb|AAU15402.1| carboxyl-terminal protease [Bacillus cereus E33L]
          Length = 469

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 380 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 437

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 438 KTAEAIQTKIIEKIR 452


>gi|42784334|ref|NP_981581.1| carboxyl-terminal protease [Bacillus cereus ATCC 10987]
 gi|42740265|gb|AAS44189.1| carboxyl-terminal protease [Bacillus cereus ATCC 10987]
          Length = 469

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 380 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 437

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 438 KTAEAIQTKIIEKIR 452


>gi|30265208|ref|NP_847585.1| carboxyl-terminal protease [Bacillus anthracis str. Ames]
 gi|47530727|ref|YP_022076.1| carboxyl-terminal protease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|30259885|gb|AAP29071.1| carboxyl-terminal protease [Bacillus anthracis str. Ames]
 gi|47505875|gb|AAT34551.1| carboxyl-terminal protease [Bacillus anthracis str. 'Ames
           Ancestor']
          Length = 469

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 380 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 437

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 438 KTAEAIQTKIIEKIR 452


>gi|65317154|ref|ZP_00390113.1| COG0793: Periplasmic protease [Bacillus anthracis str. A2012]
 gi|228917786|ref|ZP_04081326.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228930182|ref|ZP_04093191.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229094276|ref|ZP_04225352.1| Carboxyl-terminal protease [Bacillus cereus Rock3-42]
 gi|229124688|ref|ZP_04253869.1| Carboxyl-terminal protease [Bacillus cereus 95/8201]
 gi|228658783|gb|EEL14442.1| Carboxyl-terminal protease [Bacillus cereus 95/8201]
 gi|228689129|gb|EEL42952.1| Carboxyl-terminal protease [Bacillus cereus Rock3-42]
 gi|228829467|gb|EEM75095.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841891|gb|EEM86998.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 494

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|39933165|ref|NP_945441.1| peptidoglycan-binding domain 1 [Rhodopseudomonas palustris CGA009]
 gi|39652790|emb|CAE25529.1| unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 447

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L  G+     Q ++  L  +GD +      V+    + +A+K FQ   G  P+G++
Sbjct: 42  TAKTLAQGDR----QAIQSDLAWTGDYNGLINGEVS--DRMIAAIKQFQTNQGHKPTGVL 95

Query: 158 DSSTLEAM 165
           +      +
Sbjct: 96  NPQERGQL 103


>gi|331090845|ref|ZP_08339691.1| hypothetical protein HMPREF9477_00334 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330399704|gb|EGG79366.1| hypothetical protein HMPREF9477_00334 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 540

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 49/179 (27%), Gaps = 57/179 (31%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVI 246
              G  Y  V++    +   +NGK+ + S ++ G+      TP     +           
Sbjct: 408 NDFGNTYAEVDLTTQHMWFFQNGKLMMESPIVTGKPSTGHATPQGTYTVTY-------TQ 460

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             ++++  ++                     GK  +   VD+  P      F        
Sbjct: 461 KGAVLRGKILP-------------------NGKREYETPVDFWMPFNGGIGF-------- 493

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILF--NNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                            HD      F  N  +   + GCV +       L  +L   TP
Sbjct: 494 -----------------HDATWQSSFGGNRYLTHGSHGCVNMPYDKAQQLFGYLKAGTP 535


>gi|314936435|ref|ZP_07843782.1| carboxyl- protease [Staphylococcus hominis subsp. hominis C80]
 gi|313655054|gb|EFS18799.1| carboxyl- protease [Staphylococcus hominis subsp. hominis C80]
          Length = 489

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   +G+++ +V+ ++  L   G  +  +  S  FD  + + +KLFQ  + L  +G  D+
Sbjct: 403 KTYSVGDNNKNVKSIKIGLDALGYYNGDE--SNQFDNQLANTIKLFQSNNQLSETGKFDT 460

Query: 160 ST 161
            T
Sbjct: 461 KT 462


>gi|228476033|ref|ZP_04060741.1| carboxy- processing proteinase [Staphylococcus hominis SK119]
 gi|228269856|gb|EEK11336.1| carboxy- processing proteinase [Staphylococcus hominis SK119]
          Length = 489

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   +G+++ +V+ ++  L   G  +  +  S  FD  + + +KLFQ  + L  +G  D+
Sbjct: 403 KTYSVGDNNKNVKSIKIGLDALGYYNGDE--SNQFDNQLANTIKLFQSNNQLSETGKFDT 460

Query: 160 ST 161
            T
Sbjct: 461 KT 462


>gi|119511704|ref|ZP_01630808.1| ErfK/YbiS/YcfS/YnhG-like protein [Nodularia spumigena CCY9414]
 gi|119463613|gb|EAW44546.1| ErfK/YbiS/YcfS/YnhG-like protein [Nodularia spumigena CCY9414]
          Length = 237

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 45/155 (29%), Gaps = 52/155 (33%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           V+VN+        + G+V     + +G+   +TP    RI      P W  P +      
Sbjct: 113 VVVNLSDRRTYVYKGGEVIASYPIAIGKEGWETPTGSFRITDKQKYPIWQHPIT------ 166

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                   +VF                    G  + +    I F
Sbjct: 167 -----------------------GKVFPS------------------GADSPLGERWIGF 185

Query: 316 --YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               RN    H TP+  L        + GC+R+RN
Sbjct: 186 WSDGRNEIGFHGTPDTHLLGA---AISHGCLRMRN 217


>gi|125975485|ref|YP_001039395.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
 gi|125715710|gb|ABN54202.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
          Length = 289

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
                   ++V+I A +L    +G++     V  G+    TP     I     NP
Sbjct: 176 PVAPSSVRIIVSIAAKTLSLYRDGRLVKSYPVATGKPTTPTPRGTFTIINKQVNP 230


>gi|329890128|ref|ZP_08268471.1| putative peptidoglycan binding domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328845429|gb|EGF94993.1| putative peptidoglycan binding domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 346

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 59/189 (31%)

Query: 195 YVLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +++V+    S+   +   K+       +G   R  P     ++ +   P           
Sbjct: 215 HIVVDKAERSVRVYDAADKLLAFYPATIGSSARPAP--SGELSVVGVAPE---------- 262

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                    P Y  D +    D   ++V V                  PG  N + S  I
Sbjct: 263 ---------PNYTYDPDRVSYDRGDRKVIV-----------------PPGPNNPVGSVWI 296

Query: 314 EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
           +     +TY +H TP+P     V +  +SGCVR+ N              W    +   V
Sbjct: 297 DL--SRDTYGIHGTPDPS---KVGKTFSSGCVRLTN--------------WDAEQLASKV 337

Query: 373 KTRKTTPVK 381
           K       +
Sbjct: 338 KPGVRVTFR 346


>gi|304394045|ref|ZP_07375968.1| peptidoglycan-binding domain 1 protein [Ahrensia sp. R2A130]
 gi|303293485|gb|EFL87862.1| peptidoglycan-binding domain 1 protein [Ahrensia sp. R2A130]
          Length = 1176

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 136  AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                 AV+ FQ   G+  +G +D  TL A+N+
Sbjct: 1145 PNTRKAVRDFQRSAGIPVTGEIDRETLRALNI 1176


>gi|329928325|ref|ZP_08282196.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
 gi|328937882|gb|EGG34287.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
          Length = 223

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    VQ ++ RL  +G  +        F+     ++K +Q  H L P+G+V S
Sbjct: 156 RDLAEGDVGGDVQLIQSRLKSAGYYNGECDGKFRFNTT--ESLKKYQRDHHLIPNGVVSS 213

Query: 160 STLEAM 165
              E +
Sbjct: 214 KEYEEL 219


>gi|317047415|ref|YP_004115063.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
 gi|316949032|gb|ADU68507.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
          Length = 354

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 71/228 (31%), Gaps = 49/228 (21%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRV 224
           N  VD+ + +   NL+  ++L+        +++N     L     G K  +   + +G +
Sbjct: 71  NPGVDVYLPKAGTNLVIPQQLILPDAPREGIVINSAEMRLYYYPKGTKTVVVLPIGIGEL 130

Query: 225 DRQTPI-LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            + TPI   + + R    P W  P   +  +  A     P+                   
Sbjct: 131 GKDTPINWTTSVQRKKAGPTWT-PTKAMHAEYAARGESIPEVF----------------- 172

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
                              G  N M    +          H T     F   +R  + GC
Sbjct: 173 -----------------PAGPDNPMGLYALYIGRLYAV--HGTNAN--FGIGLR-VSHGC 210

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHI-----EEVVKTRKTTPVKLATEV 386
           VR+    D+  WL  + P  +R        +  V+   +  V++   +
Sbjct: 211 VRL-RADDI-KWLFDNVPVGTRVQFIDQPVKATVEPDGSRYVEVHNPL 256


>gi|311031912|ref|ZP_07710002.1| carboxyl-terminal protease [Bacillus sp. m3-13]
          Length = 492

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 25/107 (23%)

Query: 82  IAFYQDILSRGGW-------PELPIR----------------PLHLGNSSVSVQRLRERL 118
           +  Y+ +   G W       P +P++                 L L  +S  V+ ++  L
Sbjct: 362 LTLYKWLTPDGNWIHNDGVEPTIPVKQPDYFYANPINMEEEEELALDANSEKVKNVQVML 421

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              G  DP +     F    E AVK FQ  + L  SG VDS T E +
Sbjct: 422 KGLGF-DPGREDG-YFSKETEDAVKSFQAENDLSTSGKVDSQTAEQL 466


>gi|303233761|ref|ZP_07320415.1| ErfK/YbiS/YcfS/YnhG [Finegoldia magna BVS033A4]
 gi|302495195|gb|EFL54947.1| ErfK/YbiS/YcfS/YnhG [Finegoldia magna BVS033A4]
          Length = 469

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTP 229
           +      +G  Y+ +++ A  L    +GK+ L + V+ G       TP
Sbjct: 334 RSRNNGILGKSYIEISLGAQHLWYYRDGKLVLDTPVVTGDPSINHDTP 381


>gi|302380561|ref|ZP_07269026.1| ErfK/YbiS/YcfS/YnhG [Finegoldia magna ACS-171-V-Col3]
 gi|302311504|gb|EFK93520.1| ErfK/YbiS/YcfS/YnhG [Finegoldia magna ACS-171-V-Col3]
          Length = 469

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTP 229
           +      +G  Y+ +++ A  L    +GK+ L + V+ G       TP
Sbjct: 334 RSRNNGILGKSYIEISLGAQHLWYYRDGKLVLDTPVVTGDPSINHDTP 381


>gi|299143670|ref|ZP_07036750.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus sp. oral taxon
           386 str. F0131]
 gi|298518155|gb|EFI41894.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus sp. oral taxon
           386 str. F0131]
          Length = 260

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 10/106 (9%)

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
            + +K FQ    L  +G ++  T + +             N++    +        +++V
Sbjct: 41  VAEIKKFQALSNLTVTGKINDITKKVLYNS----------NMVVKDDIQNAPTSGEWIVV 90

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           N    +L          +  + +G  +  TP    +I     NP W
Sbjct: 91  NKTKKTLTFYSGTAPMYKFPIALGTNETPTPSAKGKIQSKHVNPAW 136


>gi|169824495|ref|YP_001692106.1| hypothetical protein FMG_0798 [Finegoldia magna ATCC 29328]
 gi|167831300|dbj|BAG08216.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
          Length = 469

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTP 229
           +      +G  Y+ +++ A  L    +GK+ L + V+ G       TP
Sbjct: 334 RSRNNGILGKSYIEISLGAQHLWYYRDGKLVLDTPVVTGDPSINHDTP 381


>gi|126698130|ref|YP_001087027.1| putative spore peptidoglycan hydrolase [Clostridium difficile 630]
 gi|255099657|ref|ZP_05328634.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-63q42]
 gi|255305541|ref|ZP_05349713.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile ATCC
           43255]
 gi|115249567|emb|CAJ67384.1| Spore cortex-lytic enzyme pre-pro-form [Clostridium difficile]
          Length = 423

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLD 152
             P   L +G+S   V+ ++ +L    +  P+         +    E+AVK+FQ   GL 
Sbjct: 334 SFPGTTLQVGSSGQYVRTIQNQLNAISNSYPAVPKVIEDGIYGTDTENAVKIFQGIFGLP 393

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            SG+VD  T   ++       R   +N
Sbjct: 394 QSGVVDFKTWYEISRVYVATTRIASLN 420


>gi|255647293|gb|ACU24113.1| unknown [Glycine max]
          Length = 357

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFD-AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S+  V  +++ L   G ++ S  LS + D   + SA+K +Q    L P+G +++ TL+ M
Sbjct: 74  SAPPVSLIKDYLSNYGYIESSGPLSNSMDQETIISAIKTYQQYFSLQPTGKLNNETLQQM 133


>gi|115380489|ref|ZP_01467464.1| ErfK/YbiS/YcfS/YnhG family [Stigmatella aurantiaca DW4/3-1]
 gi|115362504|gb|EAU61764.1| ErfK/YbiS/YcfS/YnhG family [Stigmatella aurantiaca DW4/3-1]
          Length = 278

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 85/271 (31%), Gaps = 78/271 (28%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-----GLDPS 154
             +  G     V+ L+E L+  G   P  G   AF      AV+ FQ+        +  +
Sbjct: 35  GTIGPGARGTGVRALQEALLAMGFSLPG-GADGAFGKQSAKAVRNFQVHAQSAFPNVKAT 93

Query: 155 GMVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           G VD++TL+A++   P   +  Q             Q +        +P        +G 
Sbjct: 94  GGVDAATLQALDALAPAPKQTGQ------------SQNLP-------VPRY------DGT 128

Query: 213 VGLRSTVIVGRVDRQTPIL--HSRINRIMFNPYWVI-----PRSIIQKDMMALLRQDPQY 265
                 V+V + + +T +     ++  I  N    +     P     K +   L +   Y
Sbjct: 129 PV---RVVVVKNEHRTFLFDAQGQLQGIFGN---AVGANSSPTDKGLKQVSGKLGRAEAY 182

Query: 266 LKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                +      G  V+    +D +  +          G+                  +H
Sbjct: 183 ALGQKL-----WGGPVYGPRLIDLSWADGS------RSGEE-----------------LH 214

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            T  P      V   + GC+R  N   + ++
Sbjct: 215 GTNAPDKLGEDV---SHGCIRHGNTDIIALY 242


>gi|75675836|ref|YP_318257.1| lytic murein transglycosylase [Nitrobacter winogradskyi Nb-255]
 gi|74420706|gb|ABA04905.1| Lytic murein transglycosylase [Nitrobacter winogradskyi Nb-255]
          Length = 407

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             VQ ++ RL  +G    + G           AVK FQ R GL P G      L  +
Sbjct: 349 AEVQEVQTRLTQAGF--DTGGTDGRVGNDTMKAVKDFQARVGLPPDGYAGLKVLAKL 403


>gi|197301806|ref|ZP_03166876.1| hypothetical protein RUMLAC_00532 [Ruminococcus lactaris ATCC
           29176]
 gi|197299246|gb|EDY33776.1| hypothetical protein RUMLAC_00532 [Ruminococcus lactaris ATCC
           29176]
          Length = 530

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTP 229
            Q  G  Y  V++    +  + NG V L + V+ G+   DR TP
Sbjct: 394 AQDWGSTYAEVDVTTQHMWYIVNGAVVLETDVVTGKPTPDRVTP 437


>gi|311694519|gb|ADP97392.1| peptidoglycan-binding domain 1 protein-like protein [marine
           bacterium HP15]
          Length = 373

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 24/34 (70%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           D  + +A++ +Q ++GL  +G +D++TL+A+ V 
Sbjct: 60  DEQLRAAIRAYQAQNGLQTNGNLDTATLKALGVT 93


>gi|291546019|emb|CBL19127.1| Putative peptidoglycan binding domain./L,D-transpeptidase catalytic
           domain [Ruminococcus sp. SR1/5]
          Length = 203

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR---VDRQTP--ILH 232
           V  MR        +G  Y+ V++ A  L   ++G + L S ++ G     +RQTP  I  
Sbjct: 124 VYAMRANARGMNDIGSTYIEVDLSAQHLYYYQDGSIILESDIVSGDMQYAERQTPPGIFS 183

Query: 233 SRIN 236
           + + 
Sbjct: 184 TVLQ 187


>gi|209966451|ref|YP_002299366.1| hypothetical protein RC1_3190 [Rhodospirillum centenum SW]
 gi|209959917|gb|ACJ00554.1| hypothetical protein RC1_3190 [Rhodospirillum centenum SW]
          Length = 385

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 10/68 (14%)

Query: 105 GNSSVS------VQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           G+S         V  ++ RL   G  +  + GL+       E+A++ FQ    L   G  
Sbjct: 313 GDSGPRPLDRAGVAEVQRRLKALGYPMGRADGLTG---PRTEAAIRAFQKDRRLTVDGRA 369

Query: 158 DSSTLEAM 165
            ++ LE +
Sbjct: 370 TAALLEQI 377


>gi|311070029|ref|YP_003974952.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus atrophaeus 1942]
 gi|310870546|gb|ADP34021.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus atrophaeus 1942]
          Length = 483

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 23/106 (21%)

Query: 82  IAFYQDILSRGGW-------PELPIR--------------PLHLGNSSVSVQRLRERLII 120
           +  Y+ +   G W       P + I+              PL L  ++  V+   + L+ 
Sbjct: 354 LTLYKWLTPNGNWIHKKGIKPTIAIKQPDYFEAGPLQLKQPLKLDMNNEDVKH-AQVLLK 412

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
               DP +     F   ++ AV  FQ ++ L+ SG++D  T E MN
Sbjct: 413 GLSFDPGRDDG-YFSEGMKKAVLAFQDQNKLNKSGVIDQRTAEKMN 457


>gi|222529956|ref|YP_002573838.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456803|gb|ACM61065.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor bescii DSM
           6725]
          Length = 223

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++ V V  ++ RL   G       +   +   +E A+ LFQ ++ L  +  +  
Sbjct: 154 RTIYPGDTGVDVMAVQRRLKELGIY--YGDIDGKYGPTLEYAINLFQKKNKLPVTNKITP 211

Query: 160 STLEAM 165
             L  M
Sbjct: 212 YLLRKM 217


>gi|167766804|ref|ZP_02438857.1| hypothetical protein CLOSS21_01312 [Clostridium sp. SS2/1]
 gi|317498794|ref|ZP_07957082.1| peptidoglycan binding domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|167711558|gb|EDS22137.1| hypothetical protein CLOSS21_01312 [Clostridium sp. SS2/1]
 gi|316893929|gb|EFV16123.1| peptidoglycan binding domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 419

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++++L  I+ D    P+  +   +     +AV+ FQ   GL  +
Sbjct: 335 PGYDLTIGSSGDKVRQIQQQLNRIAKDYPSLPTIAVDGVYGESTANAVRKFQNVFGLPQT 394

Query: 155 GMVDSSTLE 163
           G+VD  T  
Sbjct: 395 GIVDYPTWY 403


>gi|312897678|ref|ZP_07757095.1| ErfK/YbiS/YcfS/YnhG [Megasphaera micronuciformis F0359]
 gi|310621311|gb|EFQ04854.1| ErfK/YbiS/YcfS/YnhG [Megasphaera micronuciformis F0359]
          Length = 355

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 5/70 (7%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            +LVN  +  L      +      V VG+    TP  + R+     NP W+ P     +D
Sbjct: 74  RILVNTASRILTLYRGKEKAAMYPVGVGKASTPTPSGYYRVETKEVNPEWIDP-----ED 128

Query: 255 MMALLRQDPQ 264
               +   P 
Sbjct: 129 TENRIASGPG 138


>gi|78044166|ref|YP_359174.1| putative peptidoglycan-binding protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996281|gb|ABB15180.1| putative peptidoglycan-binding protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 214

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            E+P R L +G+    V  L+E L + G       +   F   +E AV  F+  +GL   
Sbjct: 142 QEIPWRTLVVGSKGSDVLILQELLKLKGYYSG--PIDGIFGRKMEKAVVKFRADYGLPSD 199

Query: 155 GMV 157
             +
Sbjct: 200 NRI 202


>gi|329938065|ref|ZP_08287516.1| lipoprotein [Streptomyces griseoaurantiacus M045]
 gi|329302554|gb|EGG46444.1| lipoprotein [Streptomyces griseoaurantiacus M045]
          Length = 293

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 55/160 (34%), Gaps = 32/160 (20%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P R L   G+    V+ L+ RL     L    G + ++D     AV  FQ + GL  +G 
Sbjct: 83  PARVLWSEGDHGRDVRELQARLKQVAWL--FDGPTGSYDDLTAKAVGGFQGKRGLPRTGR 140

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL------------RYVLVNIPAAS 204
            D+ T +          R L +     K  L    G             R + ++  + +
Sbjct: 141 ADTVTWQ----------RLLAMTHEPTKWELYAFGGQPAAPPDPRCTTGRVLCISKTSRT 190

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L  + +G+      V  G     T          +F+ YW
Sbjct: 191 LRWMIDGRTVSVMPVRFGTELTPT-------REGVFHVYW 223


>gi|56963635|ref|YP_175366.1| spore cortex-lytic enzyme [Bacillus clausii KSM-K16]
 gi|56909878|dbj|BAD64405.1| spore cortex-lytic enzyme [Bacillus clausii KSM-K16]
          Length = 296

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G +   V  L+ RL   G  +    +   F      AV+ +Q  +GL+  G+V    
Sbjct: 36  IQKGATGDDVVELQSRLQYVGYYNG--KIDGVFGWGTYWAVRHYQYEYGLEIDGLVGDDM 93

Query: 162 LEAMNVPVD 170
              +    D
Sbjct: 94  KAKLASTTD 102


>gi|108763212|ref|YP_631448.1| hypothetical protein MXAN_3249 [Myxococcus xanthus DK 1622]
 gi|108467092|gb|ABF92277.1| hypothetical protein MXAN_3249 [Myxococcus xanthus DK 1622]
          Length = 197

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            G  S +++  +ERL   G     +  S    A  +SAV+ FQ RHGL  +G +
Sbjct: 133 PGFESDALRAAQERLHNLGYAIEGERGSPG--ASTKSAVRAFQRRHGLPETGQL 184


>gi|66808293|ref|XP_637869.1| hypothetical protein DDB_G0286137 [Dictyostelium discoideum AX4]
 gi|60466300|gb|EAL64361.1| hypothetical protein DDB_G0286137 [Dictyostelium discoideum AX4]
          Length = 1009

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L    +  +V  L   L   G LD     +   + +  ESA++ FQ  + +  +G+ D S
Sbjct: 430 LKSSTTGDAVSLLNYSLYSIGYLDEYNHSTREIYTSITESAIRKFQEDNNIPMTGVADFS 489

Query: 161 TLE 163
           T+ 
Sbjct: 490 TIR 492


>gi|319651370|ref|ZP_08005499.1| sporulation specific N-acetylmuramoyl-L-alanine amidase [Bacillus
           sp. 2_A_57_CT2]
 gi|317396901|gb|EFV77610.1| sporulation specific N-acetylmuramoyl-L-alanine amidase [Bacillus
           sp. 2_A_57_CT2]
          Length = 279

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V  L+ RL   G  +    +   F      A++ FQ   GL   G+    T   
Sbjct: 41  GAVGNDVIELQSRLQYLGFYNG--KIDGVFGWGTYWALRNFQYEFGLPIDGLAGQETKNK 98

Query: 165 M 165
           +
Sbjct: 99  L 99


>gi|297199334|ref|ZP_06916731.1| peptidoglycan-binding membrane protein [Streptomyces sviceus ATCC
           29083]
 gi|197715335|gb|EDY59369.1| peptidoglycan-binding membrane protein [Streptomyces sviceus ATCC
           29083]
          Length = 72

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVDS 159
           L  G+    V  L  RL   G           +D  VE AV  +Q + G+  +  G+ D 
Sbjct: 2   LRRGSEGAEVVELELRLTQVGLYSRKAAG--HYDEGVEDAVAAYQWQRGVQVAEHGVYDL 59

Query: 160 STLEAM 165
            T E +
Sbjct: 60  VTRERL 65


>gi|92116826|ref|YP_576555.1| negative regulator of AmpC, AmpD [Nitrobacter hamburgensis X14]
 gi|91799720|gb|ABE62095.1| negative regulator of AmpC, AmpD [Nitrobacter hamburgensis X14]
          Length = 289

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 8/79 (10%)

Query: 92  GGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W    P +    L  G+    V+ L++ L   G        S  FD      V  FQ 
Sbjct: 191 GHWVRPSPIVRGDVLKTGSEGDDVRALQQSLARYGY---GIKASGTFDTPTMEVVTAFQR 247

Query: 148 RHGLD-PSGMVDSSTLEAM 165
               +   G+ D STL  +
Sbjct: 248 HFRPERVDGVADQSTLNTL 266


>gi|119945970|ref|YP_943650.1| peptidoglycan binding domain-containing protein [Psychromonas
           ingrahamii 37]
 gi|119864574|gb|ABM04051.1| Peptidoglycan-binding domain 1 protein [Psychromonas ingrahamii 37]
          Length = 221

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+R++E L + G       +  A+      +V  FQ   GL  +G VD +T  A
Sbjct: 28  GMRGKEVKRVQEWLNLQG---VGVVIDSAYGPATTRSVVRFQDESGLSETGEVDDATFNA 84

Query: 165 MNVPVDLRIRQLQVNL 180
           +  P+   ++Q ++N 
Sbjct: 85  LVKPMRDVLKQ-RLNA 99


>gi|312114454|ref|YP_004012050.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311219583|gb|ADP70951.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 263

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 10/80 (12%)

Query: 92  GGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W    P +    L  G+   +V+ L+++L   G       ++ A+D      V+ FQ 
Sbjct: 173 GHWVEPAPIVEGDALDTGSCGAAVRELQKKLAAYGY---GIDVTGAYDDATRIVVRAFQ- 228

Query: 148 RHGLDP--SGMVDSSTLEAM 165
           RH       G  D STL+ +
Sbjct: 229 RHFRPALVDGRADPSTLKTL 248


>gi|220908597|ref|YP_002483908.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425]
 gi|219865208|gb|ACL45547.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425]
          Length = 204

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 39/148 (26%), Gaps = 53/148 (35%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +   ++ +V     V VG+   +TP    R+   + NP                     
Sbjct: 86  RVYLYQDDQVAASYPVAVGKPGWETPTGKFRVMHKVVNP--------------------- 124

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY---SRNN 320
                    + +     V                    PG  N +    I F    ++  
Sbjct: 125 ---------VFENPFNGVVT-----------------PPGPGNPLGDRLIVFAKVGNKGY 158

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN 348
              H T    L        + GCVR++N
Sbjct: 159 AGFHGTTNEALIGQ---AVSHGCVRMKN 183


>gi|254501042|ref|ZP_05113193.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222437113|gb|EEE43792.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 249

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 28/170 (16%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
           L+L + +SL +  ++   LD  IN          F+    RV+ G  S+  +        
Sbjct: 90  LVLDLQISLRKADLYEGPLDG-INGPATERAIRAFERKAGRVETGEASESLLALIWLHGT 148

Query: 78  TEKAIAFYQDILSRGGWPELP-IRPLHLG--------------NSSVSVQRLRERLIISG 122
              A+            P +P  +P+  G              +S   +++++  L   G
Sbjct: 149 DPAALTA----------PPVPRAKPVTSGTPRQNTQEEAATGVDSDPRLKKIQYALSELG 198

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
                  +         +A+K F++  GL  +G  +  TLE + +    R
Sbjct: 199 Y--GPLTVDGLMGTNTAAALKRFELDRGLPITGEANPQTLERLEMVSGQR 246


>gi|222056276|ref|YP_002538638.1| Peptidoglycan-binding domain 1 protein [Geobacter sp. FRC-32]
 gi|221565565|gb|ACM21537.1| Peptidoglycan-binding domain 1 protein [Geobacter sp. FRC-32]
          Length = 264

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 10/78 (12%)

Query: 98  PIRPLHLGNSSVS-VQRLRERLIISGDLDPS---KGLSVAFDAYVESAVKLFQMRH---- 149
           P R + +G      V+ L+ RL      DP+         +   ++  VKLFQ R+    
Sbjct: 4   PGRIIKVGEQDAVIVKALKLRLNKVLGSDPALRLDPDDPNYGPKMKQMVKLFQARNVDAA 63

Query: 150 G--LDPSGMVDSSTLEAM 165
           G  L   G V S T  ++
Sbjct: 64  GRPLKQDGEVGSLTWASL 81


>gi|288556068|ref|YP_003428003.1| spore cortex-lytic enzyme [Bacillus pseudofirmus OF4]
 gi|288547228|gb|ADC51111.1| spore cortex-lytic enzyme [Bacillus pseudofirmus OF4]
          Length = 348

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 2/69 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G +   V  L+ RL   G  +    +   +      AV+ +Q   GLD  G+V    
Sbjct: 37  IQQGATGDDVVELQSRLQYIGFYNG--KIDGVYGWGTYWAVRNYQYEFGLDIDGLVGPEM 94

Query: 162 LEAMNVPVD 170
            E +    +
Sbjct: 95  KEMLAKSTE 103


>gi|158313774|ref|YP_001506282.1| peptidoglycan binding domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158109179|gb|ABW11376.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EAN1pec]
          Length = 187

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 113 RLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+ RL+  G  L    G    + A    AV   Q   GL+  G+V  +T  ++
Sbjct: 3   ALQRRLVELGYWLGEPNG---IYGALTVQAVLAAQKVAGLERDGLVGPATWASL 53


>gi|149914813|ref|ZP_01903343.1| lytic murein transglycosylase [Roseobacter sp. AzwK-3b]
 gi|149811606|gb|EDM71441.1| lytic murein transglycosylase [Roseobacter sp. AzwK-3b]
          Length = 432

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 12/97 (12%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           +A  + AI   + +    GW  L +       S    + ++  L   G  D      V  
Sbjct: 348 LAGIQDAI---EAVAGACGWSTLDL-------SRDDYRAIQTMLNAGGF-DAGTPDGVWG 396

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           +     A++ FQ ++GL  +G  D  TLEA+ V    
Sbjct: 397 NGS-RKAMRAFQEQNGLPATGAPDRVTLEALGVSPSD 432


>gi|255525438|ref|ZP_05392376.1| Peptidoglycan-binding domain 1 protein [Clostridium carboxidivorans
           P7]
 gi|296187864|ref|ZP_06856258.1| hypothetical protein CLCAR_3370 [Clostridium carboxidivorans P7]
 gi|255510905|gb|EET87207.1| Peptidoglycan-binding domain 1 protein [Clostridium carboxidivorans
           P7]
 gi|296047821|gb|EFG87261.1| hypothetical protein CLCAR_3370 [Clostridium carboxidivorans P7]
          Length = 302

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 18/94 (19%)

Query: 76  AQTEKAIAFYQD---ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
            +T KA+  Y +   I  + G+  + +              ++++LI  G    + G   
Sbjct: 105 PKTAKALLKYVNNTSIDDKNGFTPVSVN-------------IQKQLIDLGYKINANGNLS 151

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           ++D  +  A++ FQ  + L  +G VD + L  +N
Sbjct: 152 SYDTML--AIRQFQKTNNLSVTGKVDINLLNKLN 183



 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 7/77 (9%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            + L N S  V+ ++  L +             +  + E AVK  Q + G++  G+    
Sbjct: 49  TIKLNNKSDIVKHIQVTLNL--YFGSGLAEDGVYGNFTEDAVKSVQKKLGINVDGIFGPK 106

Query: 161 TLEAM-----NVPVDLR 172
           T +A+     N  +D +
Sbjct: 107 TAKALLKYVNNTSIDDK 123


>gi|119909119|ref|XP_590696.3| PREDICTED: matrix metalloproteinase 17 [Bos taurus]
 gi|297484686|ref|XP_002694502.1| PREDICTED: MMP17 protein-like [Bos taurus]
 gi|296478663|gb|DAA20778.1| MMP17 protein-like [Bos taurus]
          Length = 591

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 51  LSRFGYLPPADPETGQLQTPEELSKAIVAMQQFGGLEATGVLDEATLALMKTPRCSLPDL 110

Query: 176 LQVNLMRIKKLLE 188
             V L R ++   
Sbjct: 111 PAVALARRRRQAP 123


>gi|110634368|ref|YP_674576.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Mesorhizobium sp. BNC1]
 gi|110285352|gb|ABG63411.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Chelativorans sp. BNC1]
          Length = 251

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVDSS 160
           L  G+   +V  L+ RL   G        +  FDA  E+ V  FQ        +G+ DSS
Sbjct: 181 LAPGDRGSAVAGLQRRLAEYGY---GIEKTGVFDAETETVVAAFQRHFRPSAVNGIADSS 237

Query: 161 T 161
           T
Sbjct: 238 T 238


>gi|294500843|ref|YP_003564543.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM B1551]
 gi|294350780|gb|ADE71109.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM B1551]
          Length = 344

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 5/72 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD--P 153
            LP   L  G+S  +V++L+  L           +   +    + AV+ FQ+ + L    
Sbjct: 268 PLPNGILKQGDSGEAVKQLQRALNAVNF--KVGSVDGIYGVQTKDAVRRFQLVY-LPYDV 324

Query: 154 SGMVDSSTLEAM 165
            G+    T   +
Sbjct: 325 DGIYGPQTKNKL 336


>gi|310826913|ref|YP_003959270.1| Peptidoglycan-binding lysin domain protein [Eubacterium limosum
           KIST612]
 gi|308738647|gb|ADO36307.1| Peptidoglycan-binding lysin domain protein [Eubacterium limosum
           KIST612]
          Length = 331

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             + +++E L   G      G +        +A+K FQ ++GL+  G+    T  A+ +
Sbjct: 276 TEIAQIQETLKRQGYDIAIDGGAG---PISIAALKDFQTKNGLEADGICGDLTRAALGI 331


>gi|323706377|ref|ZP_08117941.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534271|gb|EGB24058.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 418

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +   R L+ G     V  L+  L   G    +  +   F     + V  FQ    L   G
Sbjct: 33  QFGSRLLYTGTYGTDVSELQSILNSIGF--STGAIDGVFGNNTLNGVLAFQKAENLVADG 90

Query: 156 MVDSSTLEAM 165
           +V  +T  A+
Sbjct: 91  IVGPNTYNAI 100


>gi|269956385|ref|YP_003326174.1| peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269305066|gb|ACZ30616.1| Peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 359

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 96  ELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           E+P  R L  G     V +++  L  +G L         FD    +AV+ +Q   G++  
Sbjct: 113 EVPAFRDLFQGAKGADVAQVQRFLAGAGFLTGEADGD--FDPATATAVRAWQKSLGVERD 170

Query: 155 GMV 157
           G+V
Sbjct: 171 GVV 173


>gi|47567393|ref|ZP_00238106.1| carboxyl-terminal protease [Bacillus cereus G9241]
 gi|47568463|ref|ZP_00239163.1| carboxyl-terminal protease [Bacillus cereus G9241]
 gi|47554854|gb|EAL13205.1| carboxyl-terminal protease [Bacillus cereus G9241]
 gi|47556014|gb|EAL14352.1| carboxyl-terminal protease [Bacillus cereus G9241]
          Length = 469

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 380 KTLSYNSNDVQVKHAQEMLKSLGYVTGREDG--YFSKETESALKAFQNANKMEATGQLDK 437

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 438 KTAEAIQTKIIEKIR 452


>gi|47569287|ref|ZP_00239972.1| carboxyl-terminal protease [Bacillus cereus G9241]
 gi|47554058|gb|EAL12424.1| carboxyl-terminal protease [Bacillus cereus G9241]
          Length = 494

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVTGREDG--YFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR 174
            T EA+   +  +IR
Sbjct: 463 KTAEAIQTKIIEKIR 477


>gi|291299239|ref|YP_003510517.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568459|gb|ADD41424.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 198

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 106 NSSVSVQRL-RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           +    +  L +  L   G L  S+ +   F      A K +Q  H LD  G V S T  A
Sbjct: 68  SRGTDLVLLWQSILAADGYLPGSE-IDGYFGDRTAEATKEWQSDHDLDSDGRVGSKTWAA 126

Query: 165 ----MNVPVD 170
               MNV  D
Sbjct: 127 ADDNMNVDSD 136


>gi|295706189|ref|YP_003599264.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
 gi|294803848|gb|ADF40914.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
          Length = 346

 Score = 42.1 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD--P 153
            LP   L  G+S  +V++L++ L           +   +    + AV+ FQ+ + L    
Sbjct: 270 PLPNGILKQGDSGEAVKQLQKALNAVNF--KVGPVDGIYGVQTKDAVRRFQLVY-LPYDV 326

Query: 154 SGMVDSSTLEAM 165
            G+    T   +
Sbjct: 327 DGIYGPQTKNKL 338


>gi|328544535|ref|YP_004304644.1| Lysozyme [polymorphum gilvum SL003B-26A1]
 gi|326414277|gb|ADZ71340.1| Lysozyme [Polymorphum gilvum SL003B-26A1]
          Length = 291

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 4/52 (7%)

Query: 116 ERLIISGDLDPSKGLSVAFD-AYVESAVKLFQMRHG-LDPSGMVDSSTLEAM 165
           +RL+ S  L    G    FD     +AV  FQ  H  L   G +  +T  A+
Sbjct: 178 QRLLAS--LGYRPGPVDGFDGPRTRAAVMRFQQDHPPLSVDGRIGPATRAAL 227


>gi|298241485|ref|ZP_06965292.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Ktedonobacter racemifer DSM 44963]
 gi|297554539|gb|EFH88403.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Ktedonobacter racemifer DSM 44963]
          Length = 381

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 43/125 (34%), Gaps = 22/125 (17%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           S  P + +E  A+  +            G PE     L  G    +V+ L+  L   G  
Sbjct: 222 SKFPQLRREVAAKLGQ------------GMPERTWVDLRWGVRGDTVRALQYVLRAQG-- 267

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-------NVPVDLRIRQLQ 177
                +S  +D      V  FQ   G+ P G   + T EA+       N      +  +Q
Sbjct: 268 -SDIMISGTYDDPTYKLVTAFQSAKGIAPDGYTRNDTWEALVGAIRLDNQSQGDYVNAVQ 326

Query: 178 VNLMR 182
           V L R
Sbjct: 327 VILKR 331


>gi|225427816|ref|XP_002275758.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 391

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+    +Q++++ L   G +  +      S  F+  +ES++K FQ  + L+ +G +D+
Sbjct: 183 KKGDKREGIQKVKQYLQRYGYISSTHYSQMGSDDFNDALESSLKAFQTFYHLNSTGTLDA 242

Query: 160 STLEAMNVP 168
           +T   M+ P
Sbjct: 243 ATATLMSRP 251


>gi|325262717|ref|ZP_08129453.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Clostridium sp. D5]
 gi|324031811|gb|EGB93090.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Clostridium sp. D5]
          Length = 465

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-DRQTP 229
            R      Q  G  ++ V++ A  +  + +G V   + V+ G+  +  TP
Sbjct: 324 QRGATHEAQDWGKTFIEVDLSAQYMWYIVDGNVAFETAVVTGKPYEHSTP 373


>gi|152990232|ref|YP_001355954.1| hypothetical protein NIS_0483 [Nitratiruptor sp. SB155-2]
 gi|151422093|dbj|BAF69597.1| hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 185

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 115 RERLIISGDLDPSKGLSVAF----DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           R +L    D+   K     F    +  +E+A+K  Q   G+   G+V   TL+A+N
Sbjct: 89  RAKLY---DVQSQKIAEEIFVFGVNTGIENAIKKAQELVGVKVDGIVGPKTLKALN 141


>gi|329890511|ref|ZP_08268854.1| N-acetylmuramoyl-L-alanine amidase amiD [Brevundimonas diminuta
           ATCC 11568]
 gi|328845812|gb|EGF95376.1| N-acetylmuramoyl-L-alanine amidase amiD [Brevundimonas diminuta
           ATCC 11568]
          Length = 253

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 4/66 (6%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDS 159
           PL  G+  + V  LR  L   G          A+D      V+ FQ     D   G+ D 
Sbjct: 174 PLSPGDEGLGVIVLRSGLHRLGY---GVQPGGAYDEETRLTVEAFQRHWRPDRVDGIADG 230

Query: 160 STLEAM 165
            T   +
Sbjct: 231 ETRARL 236


>gi|296086490|emb|CBI32079.3| unnamed protein product [Vitis vinifera]
          Length = 334

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           H G+ +  + +L+E     G +  S      FD   E A+K +Q+   L+ +G +D +TL
Sbjct: 62  HAGDKADGLAKLKEYFHYFGYIHNSNYTDD-FDDAFEQALKTYQLNFNLNTTGQLDEATL 120

Query: 163 EAMNVP 168
             +  P
Sbjct: 121 NQIVSP 126


>gi|225424789|ref|XP_002267298.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 364

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           H G+ +  + +L+E     G +  S      FD   E A+K +Q+   L+ +G +D +TL
Sbjct: 53  HAGDKADGLAKLKEYFHYFGYIHNSNYTDD-FDDAFEQALKTYQLNFNLNTTGQLDEATL 111

Query: 163 EAMNVP 168
             +  P
Sbjct: 112 NQIVSP 117


>gi|256852003|ref|ZP_05557390.1| periplasmic protease [Lactobacillus jensenii 27-2-CHN]
 gi|260661428|ref|ZP_05862341.1| periplasmic protease [Lactobacillus jensenii 115-3-CHN]
 gi|256615415|gb|EEU20605.1| periplasmic protease [Lactobacillus jensenii 27-2-CHN]
 gi|260547883|gb|EEX23860.1| periplasmic protease [Lactobacillus jensenii 115-3-CHN]
          Length = 341

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 14/84 (16%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQ--RLRERLIISGDLDPSKGLSVAFDAYVESA 141
            Y  I      P +     +LG +   V+   +  RL   G           ++    +A
Sbjct: 106 QYNQIQ-----PSIYAPGYNLGYNYEGVKTWLVMRRL---GTYAGYAN----YNWATVNA 153

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           VK FQ  HGL+P+G+VD +T   +
Sbjct: 154 VKNFQASHGLNPTGIVDLATWLKL 177


>gi|224138608|ref|XP_002326645.1| predicted protein [Populus trichocarpa]
 gi|222833967|gb|EEE72444.1| predicted protein [Populus trichocarpa]
          Length = 365

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+    +  L+E     G L        +  FD   ESAV  +Q   GL  +G +DS T+
Sbjct: 61  GSQVSGMSELKEYFNRFGYLPIPDENNFTDIFDKQFESAVIAYQTNLGLPVTGKLDSDTI 120

Query: 163 EAMNVP 168
             M  P
Sbjct: 121 SMMVSP 126


>gi|163758707|ref|ZP_02165794.1| hypothetical protein HPDFL43_14827 [Hoeflea phototrophica DFL-43]
 gi|162283997|gb|EDQ34281.1| hypothetical protein HPDFL43_14827 [Hoeflea phototrophica DFL-43]
          Length = 319

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEAM 165
           LI  G L  +    +     V SAV+ FQ  H  L   G++  +TL+ +
Sbjct: 196 LIKLGYLADAARGDM---KRVRSAVRRFQEAHPQLSNDGVMGRATLDQL 241


>gi|317472853|ref|ZP_07932161.1| autolytic lysozyme [Anaerostipes sp. 3_2_56FAA]
 gi|316899653|gb|EFV21659.1| autolytic lysozyme [Anaerostipes sp. 3_2_56FAA]
          Length = 315

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 21/106 (19%)

Query: 70  ISKETIAQTEKAIAF--YQDILSRGGWPELPIRP--------LHLGNSSVSVQRLRERLI 119
             K ++ + +KAI    Y  + + G    L  +         +  G+    V  ++E++ 
Sbjct: 219 AKKASVLKLQKAINKDKYAKLTANG---VLDSKTKNAMKKIFIKRGSRGAVVSFVQEKVK 275

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +S D                +A++ +Q +HGL   G+    TL  M
Sbjct: 276 VSQDGICGAKT--------VAAIRKYQRKHGLSVDGIAGYDTLRRM 313


>gi|209524668|ref|ZP_03273215.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209494812|gb|EDZ95120.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 401

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 5/95 (5%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-- 165
              +  L++RL   G    +  +   +      A+  FQ+  GL+ +G+V+  T +++  
Sbjct: 71  DYDIIELQKRLQEKGYYLGA--IDGIYGEKTREAISNFQLSIGLESTGIVNQETWDSLLG 128

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           N     +  Q  +N M          G   V +N 
Sbjct: 129 NSAAVSQANQ-SLNSMSPDLQKIMDRGELIVAINQ 162


>gi|162454953|ref|YP_001617320.1| N-acetylmuramoyl-L-alanine amidase [Sorangium cellulosum 'So ce
           56']
 gi|161165535|emb|CAN96840.1| N-acetylmuramoyl-L-alanine amidase [Sorangium cellulosum 'So ce
           56']
          Length = 217

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 14/84 (16%)

Query: 94  WPELPIR----------PLHLGNSSV-SVQR-LRERLIISGDLDPSKGLSVAFDAYVESA 141
           WP+ P             L LG+     V   ++ RL   G               + +A
Sbjct: 129 WPDTPGNETARAGGVTWALKLGHLDPIEVPSGVQGRLKNLGYFSREVDGKDG--PELANA 186

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           V  +Q   GL P+G++D +T   +
Sbjct: 187 VAWYQSASGLTPTGVLDDATRAKL 210


>gi|294501799|ref|YP_003565499.1| C-terminal processing peptidase [Bacillus megaterium QM B1551]
 gi|295707148|ref|YP_003600223.1| C-terminal processing peptidase [Bacillus megaterium DSM 319]
 gi|294351736|gb|ADE72065.1| C-terminal processing peptidase [Bacillus megaterium QM B1551]
 gi|294804807|gb|ADF41873.1| C-terminal processing peptidase [Bacillus megaterium DSM 319]
          Length = 479

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 8/91 (8%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           ++  +PL    +   V+  +  L   G           F    E+AV  FQ  +    +G
Sbjct: 386 QVDKKPLTRDMTGDQVKNAQVMLKGLGFEPG--RTDGYFSKETETAVTAFQKANKQKATG 443

Query: 156 MVDSSTLEAMNVPVDLRI------RQLQVNL 180
            +D  T   +   +  +I      RQLQ  L
Sbjct: 444 EIDEDTAALLQTKLLEKIKSKDEDRQLQTAL 474


>gi|271961885|ref|YP_003336081.1| hypothetical protein Sros_0306 [Streptosporangium roseum DSM 43021]
 gi|270505060|gb|ACZ83338.1| hypothetical protein Sros_0306 [Streptosporangium roseum DSM 43021]
          Length = 401

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           R L  G     V++L   L   G       +   +      AV  +Q   GLD +G V
Sbjct: 159 RTLAQGVEGPDVRQLERNLKALGY--GGFTVDEEYTYATAEAVMRWQEDRGLDETGTV 214


>gi|284034110|ref|YP_003384041.1| peptidoglycan-binding domain 1 protein [Kribbella flavida DSM
           17836]
 gi|283813403|gb|ADB35242.1| Peptidoglycan-binding domain 1 protein [Kribbella flavida DSM
           17836]
          Length = 342

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           R L  G+    V +L + L   G           +  Y   AV+ +Q   GL  +G V
Sbjct: 104 RRLTSGSEGPDVLQLEQNLQALGY--DGFTADDEYTLYTAEAVEQWQEDRGLAETGSV 159


>gi|172051608|emb|CAQ35003.1| hypothetical protein [Photobacterium damselae subsp. piscicida]
          Length = 464

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 16/178 (8%)

Query: 5   LKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNF-LARVDMGI 63
           L + +I +C    + +     +++        ++I+N+      + R+     +R +  +
Sbjct: 152 LSVPEIRWCIREGIRIEAMRDIIDNNTGIDEFNQIVNDYNSRCGSYRYREGSQSRAERDV 211

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL------HLGNSSVSVQRLRER 117
           ++    I  E I +  +    YQ       +P +                     +  + 
Sbjct: 212 EAYRSQIVSEAIREARQLGHSYQ-----PSYPSVSPGVSTSTALKKPNAQYTREAQ--QL 264

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G  DP       +      AVK FQ   GL   G V  S LE + +    + R+
Sbjct: 265 LTDLGY-DPGPVDGD-YGRRTADAVKAFQKAQGLTVDGWVSKSLLETLRLATSKKTRK 320


>gi|254559628|ref|YP_003066723.1| N-acetylmuramoyl-L-alanine amidase [Methylobacterium extorquens
           DM4]
 gi|254266906|emb|CAX22705.1| N-acetylmuramoyl-L-alanine amidase (AGR_C_3833p) [Methylobacterium
           extorquens DM4]
          Length = 250

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 21/129 (16%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE---------LPIRPLH- 103
             +AR+   I     I     +A ++ A A  +D      W           +P  P+  
Sbjct: 117 AAVARLARDIVVRRAIPGPRVLAHSDVAPARKEDPGEDFPWERLAREGVGHWVPPAPVRD 176

Query: 104 -----LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP--SGM 156
                +G++   V+ L+  L + G   P  G    FDA + + V  FQ RH       G+
Sbjct: 177 GRFFAMGDTGQPVEALQAMLALYGYEQPVTG---HFDAAMRAVVTAFQ-RHFRPARIDGV 232

Query: 157 VDSSTLEAM 165
            DSST+  +
Sbjct: 233 ADSSTITTL 241


>gi|213691418|ref|YP_002322004.1| Peptidoglycan-binding domain 1 protein [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|213522879|gb|ACJ51626.1| Peptidoglycan-binding domain 1 protein [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|320457489|dbj|BAJ68110.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 350

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 16/172 (9%)

Query: 2   VGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDM 61
           +G L    ++    +    P GLS    P   +   +  ++           +F    + 
Sbjct: 14  LGMLSAGVLVTALVIPTPTPDGLSAATSPDTVTASRQQFDDERTVEA-----SFETSAEQ 68

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHL-------GNSSVSVQRL 114
            + S       ET+    +A+   + +LS  G P + +            G++   V  L
Sbjct: 69  SLTSRAAGTVSETLCMPGQAVESGKRLLSVDGKPVIALHTDTPLYREIGTGDTGPDVLAL 128

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSSTLEAM 165
           ++ L   G    +   +  +    +  V     + G  +P G +  + +  +
Sbjct: 129 QQELARLGY---NAEGNGTYGWRTKDGVNQLLSQAGDRNPDGRIGPTDVAWL 177


>gi|239943286|ref|ZP_04695223.1| hypothetical protein SrosN15_19988 [Streptomyces roseosporus NRRL
           15998]
 gi|239989744|ref|ZP_04710408.1| hypothetical protein SrosN1_20750 [Streptomyces roseosporus NRRL
           11379]
          Length = 358

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 6/135 (4%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ-- 86
            P  A+V+   +  +    V+ R D    R           ++        +  A Y+  
Sbjct: 42  PPATATVVRTDLVLART--VDGRIDFAQRRAVKAAVEGTVTVAAAEGRTVRRGEALYELN 99

Query: 87  DILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           D      +  +P  R +  G+    V +L   L   G       +   +    E+AVK +
Sbjct: 100 DKPVTLLYGPVPAFREMKTGHRGSDVLQLERNLRDLGY-GAGLHVDTEYGEDTEAAVKRW 158

Query: 146 QMRHGLDPSGMVDSS 160
           Q     + +G V   
Sbjct: 159 QKHLNRETTGRVGRG 173


>gi|291560617|emb|CBL39417.1| Putative peptidoglycan-binding domain-containing protein
           [butyrate-producing bacterium SSC/2]
          Length = 128

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++++L  I+ D    P+  +   +     +AV+ FQ   GL  +
Sbjct: 44  PGYDLTIGSSGDKVRQIQQQLNRIAKDYPSLPTIAVDGVYGESTANAVRKFQNVFGLPQT 103

Query: 155 GMVDSSTLE 163
           G+VD  T  
Sbjct: 104 GIVDYPTWY 112


>gi|218437745|ref|YP_002376074.1| peptidoglycan-binding protein [Cyanothece sp. PCC 7424]
 gi|218170473|gb|ACK69206.1| Peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7424]
          Length = 531

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 8/83 (9%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    R L  G+    V+ ++  L        +      F+   ++AVK FQ + GL   
Sbjct: 283 PMTLTRILRWGDKGDDVKAVQCALNRFN--CNAGAEDGEFEDQTQAAVKAFQFKAGLLVD 340

Query: 155 GMVDSSTLEAMN------VPVDL 171
           G V   T E +       VP D 
Sbjct: 341 GEVGPLTAEKLGFKVTVIVPPDQ 363


>gi|304393365|ref|ZP_07375293.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303294372|gb|EFL88744.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 308

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++L+++L  +G +  S G    F    +  ++ FQ  +G   SGMV  + 
Sbjct: 207 LKFGDRGPRVKQLQDQLKNAGYMVVSDG---IFGLDTDKELRNFQRDNGFAISGMVGHAE 263

Query: 162 LEAMNVPVD 170
              +     
Sbjct: 264 WAKLGGSTA 272


>gi|147676430|ref|YP_001210645.1| hypothetical protein PTH_0095 [Pelotomaculum thermopropionicum SI]
 gi|146272527|dbj|BAF58276.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 185

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 20/48 (41%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++L+N+    L   E  ++     V VG+    TP     I   + NP
Sbjct: 12  HILINLATRQLSYFEGSRLMNTYPVGVGKPSTPTPTGKYSIIEKIMNP 59


>gi|295101499|emb|CBK99044.1| Putative peptidoglycan-binding domain-containing protein
           [Faecalibacterium prausnitzii L2-6]
          Length = 230

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 1/58 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L  G+    V  L++ L   G       +   F +  E A+K FQ R  L   G+  
Sbjct: 152 TLRRGSRGCYVMILQDALSTLGY-QTGNRIDGIFGSRTEEALKGFQRRTSLRADGVCG 208


>gi|326777537|ref|ZP_08236802.1| Peptidoglycan-binding domain 1 protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657870|gb|EGE42716.1| Peptidoglycan-binding domain 1 protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 358

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 6/135 (4%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ-- 86
            P  A+V+   +       V+ R D    RV          ++       ++  A Y+  
Sbjct: 42  PPATAAVVRTDLV--LSKTVDGRIDFAQRRVVKAAVEGTVTVAAVEGGTVKRGEALYELN 99

Query: 87  DILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           D      +  +P  R + +G+    V +L   L   G       +   +    ESAVK +
Sbjct: 100 DKPVTLLYGPVPAFREMKVGDRGSDVLQLERNLRDLGY-GTGLYVDTEYGKDTESAVKQW 158

Query: 146 QMRHGLDPSGMVDSS 160
           Q     + +G V   
Sbjct: 159 QKHLNRETTGRVGRG 173


>gi|182436925|ref|YP_001824644.1| hypothetical protein SGR_3132 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178465441|dbj|BAG19961.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 358

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 6/135 (4%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ-- 86
            P  A+V+   +       V+ R D    RV          ++       ++  A Y+  
Sbjct: 42  PPATAAVVRTDLV--LSKTVDGRIDFAQRRVVKAAVEGTVTVAAVEGGTVKRGEALYELN 99

Query: 87  DILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           D      +  +P  R + +G+    V +L   L   G       +   +    ESAVK +
Sbjct: 100 DKPVTLLYGPVPAFREMKVGDRGSDVLQLERNLRDLGY-GTGLYVDTEYGKDTESAVKQW 158

Query: 146 QMRHGLDPSGMVDSS 160
           Q     + +G V   
Sbjct: 159 QKHLNRETTGRVGRG 173


>gi|119490227|ref|ZP_01622740.1| probable phage-related lysozyme [Lyngbya sp. PCC 8106]
 gi|119454113|gb|EAW35266.1| probable phage-related lysozyme [Lyngbya sp. PCC 8106]
          Length = 284

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            FD   ++A+K FQ +  LDP G+V   T+  +
Sbjct: 250 VFDLETDAAMKKFQAQKRLDPDGLVGPITITEL 282


>gi|331090953|ref|ZP_08339795.1| hypothetical protein HMPREF9477_00438 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405175|gb|EGG84711.1| hypothetical protein HMPREF9477_00438 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 421

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++L+E+L +I+G     P       +     +AVK FQ   GL  +
Sbjct: 337 PGYDLENGSSGDKVRQLQEQLNVIAGAYPAIPKITADGIYGPATAAAVKKFQSIFGLPDT 396

Query: 155 GMVDSSTLE 163
           G+ D  T  
Sbjct: 397 GITDYPTWY 405


>gi|147677766|ref|YP_001211981.1| hypothetical protein PTH_1431 [Pelotomaculum thermopropionicum SI]
 gi|146273863|dbj|BAF59612.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 218

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P  P   L  G+    V  ++  L   G L         +    E AVK F+  +GL 
Sbjct: 146 GAPGTPPSVLKYGDKGPDVLEVQRSLKRLGYL--QWTPDGFWGNGTERAVKKFREDNGLK 203

Query: 153 PSGMVDSSTLEAM 165
            S +VD    + +
Sbjct: 204 GSVIVDEQVYKLL 216


>gi|126272561|ref|XP_001367626.1| PREDICTED: similar to putative matrix metalloproteinase
           [Monodelphis domestica]
          Length = 574

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 21/125 (16%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLG 105
           +    + +      D     +  +   + +     A    Q  LS+ GW E         
Sbjct: 18  APWPSQPEKLFHSRDHSDLKESVLRQAKPVTDLHSA----QLFLSKYGWTEGSSGG---T 70

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLE 163
            SS  +            L PS       D    +  A+  FQ  + L  +G +D +TL 
Sbjct: 71  ASSPDI------------LGPSTDDKPPMDGNPGLREAIAKFQSFNRLPVTGQLDKATLA 118

Query: 164 AMNVP 168
           AMN P
Sbjct: 119 AMNQP 123


>gi|317419770|emb|CBN81806.1| Matrix metalloproteinase-16 [Dicentrarchus labrax]
          Length = 591

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L  +        +   ++SA+   Q R+GL+ +G +DS+T+E M  P
Sbjct: 29  LQRYGYLPSADPRMSVLRSARVMQSAIAAMQRRYGLNVTGTLDSNTIEWMKRP 81


>gi|295696513|ref|YP_003589751.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
 gi|295412115|gb|ADG06607.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
          Length = 216

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P   +R L  G+    V  +++RL   G        +  F    ++A+K F+    L 
Sbjct: 142 GDPLKYMRRLKDGDIGTDVWLVQDRLRRLGFYRG--PCNGRFSLSTQAALKAFERSQHLP 199

Query: 153 PSGMVDSSTLEAM 165
             G+V      A+
Sbjct: 200 VDGVVSVRDYHAL 212


>gi|257462709|ref|ZP_05627117.1| hypothetical protein FuD12_02594 [Fusobacterium sp. D12]
 gi|317060351|ref|ZP_07924836.1| predicted protein [Fusobacterium sp. D12]
 gi|313686027|gb|EFS22862.1| predicted protein [Fusobacterium sp. D12]
          Length = 128

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 13/54 (24%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           + +  RL   G                 +AV+ FQ  +GL P G V  +T+  +
Sbjct: 83  KEIDRRLSSLGYTGK-------------NAVREFQTDYGLVPDGKVGRNTIRVL 123


>gi|307324793|ref|ZP_07603999.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces violaceusniger Tu 4113]
 gi|306889675|gb|EFN20655.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces violaceusniger Tu 4113]
          Length = 391

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 3/70 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ---MRHGLDPSGMVD 158
             +G SS  +  + +RLI  G           ++     +   +Q     HG D  G+  
Sbjct: 232 FRVGRSSPVISAVAKRLIAEGCDSYDTPPGQVWNDAHRRSYAAYQIKRGHHGADADGIPG 291

Query: 159 SSTLEAMNVP 168
             T   + VP
Sbjct: 292 PETWADLRVP 301


>gi|237756813|ref|ZP_04585300.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691029|gb|EEP60150.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 468

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 49/204 (24%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRV 224
           P D+R  Q+ V  ++ + L  +      + +NI    L     + +    +   + +G  
Sbjct: 257 PFDIRKNQIIVVPLK-RILPVKDFKYGTIYINIYEKRLYYPIKINDESYVITYPIGIGTD 315

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           D Q+PI   +I++   +P W  P SI +K+                              
Sbjct: 316 DAQSPIGEFKISQKRKDPAWYPPESI-RKE------------------------------ 344

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                    P+      PG  N + +  +   +  +  MH T +       V   + GC+
Sbjct: 345 --------QPDLPPVFPPGPDNPLGTRAMRLGNT-SFLMHGTNKEYGIGMKV---SHGCI 392

Query: 345 RV--RNIIDLDVWLLKDTPTWSRY 366
           R+   ++  L   +   TP  SR 
Sbjct: 393 RMYNEDVEKLFEVVDIGTPIVSRE 416


>gi|229087658|ref|ZP_04219785.1| Carboxyl-terminal protease [Bacillus cereus Rock3-44]
 gi|228695652|gb|EEL48510.1| Carboxyl-terminal protease [Bacillus cereus Rock3-44]
          Length = 494

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 8/87 (9%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEVTGQLDK 462

Query: 160 STLEAMNVPVDLRIR------QLQVNL 180
            T EA+   +  +IR      QLQ  L
Sbjct: 463 KTAEALQNKIIEKIRSGENDMQLQAAL 489


>gi|322703990|gb|EFY95590.1| carbohydrate-binding protein [Metarhizium anisopliae ARSEF 23]
          Length = 619

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 16/48 (33%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L   G L+     +        +A+K +Q  H L   G     T   M
Sbjct: 46  LSAYGYLESQDADTGKVGENTIAALKDYQKFHKLKVDGKFGEKTRHLM 93


>gi|304405010|ref|ZP_07386670.1| carboxyl-terminal protease [Paenibacillus curdlanolyticus YK9]
 gi|304345889|gb|EFM11723.1| carboxyl-terminal protease [Paenibacillus curdlanolyticus YK9]
          Length = 478

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 9/82 (10%)

Query: 82  IAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           +  Y ++ +      LP    L  G+   +V+ L++ L   G           FD   ++
Sbjct: 371 LPAYTELAA------LPTDSVLKKGDYGDAVKTLQQMLQALGY-SIKGATEGVFDGVTDA 423

Query: 141 AVKLFQMRHGLDP-SGMVDSST 161
           AV+  Q    + P  G V  ST
Sbjct: 424 AVRQLQQVESIQPADGQVREST 445


>gi|15894595|ref|NP_347944.1| peptodoglycan-binding domain-containing protein [Clostridium
           acetobutylicum ATCC 824]
 gi|15024244|gb|AAK79284.1|AE007643_7 Peptodoglycan-binding domain containing protein [Clostridium
           acetobutylicum ATCC 824]
 gi|325508730|gb|ADZ20366.1| Peptodoglycan-binding domain containing protein [Clostridium
           acetobutylicum EA 2018]
          Length = 148

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 32/127 (25%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKA---IAFY---QDILSRGGWPELPIRPLHLGNSSV 109
           + +V   + +++     +  A T         Y   Q ++  GG        +  G++  
Sbjct: 36  IPKVSAPVATNLNATKSKMFASTRTYGTSFGRYMTAQQVIDNGG-------IIQEGDTGE 88

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM-------RHG----LDPSGMVD 158
            V  ++ RL I  D          F +   SAV  FQ        R+G    L   G+V 
Sbjct: 89  PVADIQRRLGIYDD--------GIFGSATYSAVVDFQRRIDREFHRNGYSDPLALDGIVG 140

Query: 159 SSTLEAM 165
           + T   +
Sbjct: 141 AQTWYYL 147


>gi|126664625|ref|ZP_01735609.1| Membrane-bound lytic murein transglycosylase B [Marinobacter sp.
           ELB17]
 gi|126630951|gb|EBA01565.1| Membrane-bound lytic murein transglycosylase B [Marinobacter sp.
           ELB17]
          Length = 418

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 9/87 (10%)

Query: 87  DILSRGGW---PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
            I   GG    P +    L    S  ++ +L+++L   G    +            +A++
Sbjct: 337 RIAGAGGLQNPPPVDAPAL----SRDNIMQLQQQLEQRGY--SAGSPDGIMGPATRAAIR 390

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVD 170
            +Q+ +GL   G      L  + V   
Sbjct: 391 QYQIANGLVADGYPGPQVLHVLQVTPA 417


>gi|291568576|dbj|BAI90848.1| putative transporter [Arthrospira platensis NIES-39]
          Length = 401

 Score = 41.7 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    +  L+ RL   G    +  +   +      A+  FQ+  GL+ +G+V+  T E 
Sbjct: 70  GDYD--IIELQNRLQQKGYYLGA--IDGIYGEQTREAISNFQLDIGLESTGIVNQETWEY 125

Query: 165 MNVPVDLRIRQ 175
           +     +  ++
Sbjct: 126 LLGNAAVIAQK 136


>gi|311693485|gb|ADP96358.1| peptidoglycan-binding domain 1 protein-like protein [marine
           bacterium HP15]
          Length = 139

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +  L+  L  +G       +S   D    SA+  FQ  +GL  +G +D  T EA+ +
Sbjct: 30  DEIVALKNALYGAGY--DITNVSPQMDDSTRSALTRFQQDNGLQATGNLDDPTKEALGM 86


>gi|237737468|ref|ZP_04567949.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
 gi|229421330|gb|EEO36377.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
          Length = 124

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           E+A+K FQ  + L P G+    T++ +
Sbjct: 91  ENAIKNFQKANNLTPDGIAGPKTIKLL 117


>gi|294676544|ref|YP_003577159.1| lysozyme [Rhodobacter capsulatus SB 1003]
 gi|294475364|gb|ADE84752.1| lysozyme [Rhodobacter capsulatus SB 1003]
          Length = 309

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVN 179
           ++ FQ  HGL   G +  +TL  +        + + + + 
Sbjct: 199 IRRFQADHGLTIDGKIGRATLSTLQRRLDAAEKAKPVALA 238


>gi|312116025|ref|YP_004013621.1| hypothetical protein Rvan_3337 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311221154|gb|ADP72522.1| protein of unknown function DUF847 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 345

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 93  GWPELPI---RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           G PE+ +     LH G     V  L+ RL   G   P+  +   F      AV LFQ  +
Sbjct: 150 GQPEVQLPFDETLHAGMRGREVSSLQARLRALGY--PAGAVDGIFGEQTHRAVMLFQHDN 207

Query: 150 GLDPSGMVD 158
            L   G   
Sbjct: 208 AL--DGEAG 214


>gi|266621402|ref|ZP_06114337.1| spore cortex-lytic enzyme SleC [Clostridium hathewayi DSM 13479]
 gi|288866936|gb|EFC99234.1| spore cortex-lytic enzyme SleC [Clostridium hathewayi DSM 13479]
          Length = 424

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   VQ+++E+L     +    P       +     +AV+ FQ   GL  +
Sbjct: 339 PGYDLTIGSSGQKVQQVQEQLDAIATVYSAIPHITPDGIYGPATAAAVREFQSIFGLPVT 398

Query: 155 GMVDSSTLE 163
           G++D  T  
Sbjct: 399 GVIDFRTWY 407


>gi|310818105|ref|YP_003950463.1| ErfK/YbiS/YcfS/YnhG family protein [Stigmatella aurantiaca DW4/3-1]
 gi|309391177|gb|ADO68636.1| ErfK/YbiS/YcfS/YnhG family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 289

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 97/320 (30%), Gaps = 91/320 (28%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-----PIRPLHLGNSSVS 110
           ++ +   + S+ P+      +                G P L         +  G     
Sbjct: 5   VSSLRRPMSSNSPVPPPTAASALRNKRFS--------GQPSLVDVLSGKGTIGPGARGTG 56

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-----GLDPSGMVDSSTLEAM 165
           V+ L+E L+  G   P  G   AF      AV+ FQ+        +  +G VD++TL+A+
Sbjct: 57  VRALQEALLAMGFSLPG-GADGAFGKQSAKAVRNFQVHAQSAFPNVKATGGVDAATLQAL 115

Query: 166 NV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           +   P   +  Q             Q +        +P        +G       V+V +
Sbjct: 116 DALAPAPKQTGQ------------SQNLP-------VPRY------DGTPV---RVVVVK 147

Query: 224 VDRQTPIL--HSRINRIMFNPYWVI-----PRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
            + +T +     ++  I  N    +     P     K +   L +   Y     +     
Sbjct: 148 NEHRTFLFDAQGQLQGIFGN---AVGANSSPTDKGLKQVSGKLGRAEAYALGQKL----- 199

Query: 277 KGKEVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
            G  V+    +D +  +          G+                  +H T  P      
Sbjct: 200 WGGPVYGPRLIDLSWADGS------RSGEE-----------------LHGTNAPDKLGED 236

Query: 336 VRFETSGCVRVRNIIDLDVW 355
           V   + GC+R  N   + ++
Sbjct: 237 V---SHGCIRHGNTDIIALY 253


>gi|321455269|gb|EFX66406.1| matrix metalloproteinase 1 [Daphnia pulex]
          Length = 538

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           A+  FQ   GL+P+G+++  TLE MN P
Sbjct: 62  AIAEFQSLAGLEPTGILNEKTLEWMNKP 89


>gi|167517209|ref|XP_001742945.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778044|gb|EDQ91659.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1518

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAVKLFQMR 148
           ++  +P    R L LG++   V  L + LI + +     +  S  FD   ++AV   Q  
Sbjct: 24  AQTSFPPPFDRVLALGDAGQDVFIL-QNLIRNNNQSIVLRNASAVFDNATQAAVVALQQA 82

Query: 149 HGLDPSGMVDSSTLE 163
            GL  +G+ D++TL 
Sbjct: 83  WGLSATGVADATTLA 97


>gi|311067778|ref|YP_003972701.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           atrophaeus 1942]
 gi|310868295|gb|ADP31770.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           atrophaeus 1942]
          Length = 297

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 4/61 (6%)

Query: 107 SSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           S   V +++  L            + G+   +     +AV  FQ  +GL   G+   +T 
Sbjct: 230 SGEKVYQVQNALAALYFYPDKGAVNNGIDGIYGPKTANAVSRFQSVNGLTVDGIYGPATK 289

Query: 163 E 163
            
Sbjct: 290 A 290


>gi|229020392|ref|ZP_04177148.1| Carboxyl-terminal protease [Bacillus cereus AH1273]
 gi|228740927|gb|EEL91169.1| Carboxyl-terminal protease [Bacillus cereus AH1273]
          Length = 263

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 174 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEIEATGQLDK 231

Query: 160 STLEAMNVPVDLRIR------QLQVNL 180
            T EA+   +  +IR      QLQ  L
Sbjct: 232 KTAEAIQNKIIEKIRSGENDLQLQTAL 258


>gi|229026622|ref|ZP_04182964.1| Carboxyl-terminal protease [Bacillus cereus AH1272]
 gi|228734655|gb|EEL85307.1| Carboxyl-terminal protease [Bacillus cereus AH1272]
          Length = 494

 Score = 41.7 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEIEATGQLDK 462

Query: 160 STLEAMNVPVDLRIR------QLQVNL 180
            T EA+   +  +IR      QLQ  L
Sbjct: 463 KTAEAIQNKIIEKIRSGENDLQLQTAL 489


>gi|319935309|ref|ZP_08009747.1| hypothetical protein HMPREF9488_00578 [Coprobacillus sp. 29_1]
 gi|319809717|gb|EFW06118.1| hypothetical protein HMPREF9488_00578 [Coprobacillus sp. 29_1]
          Length = 489

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            P        ++Q ++E L   G       +   +    E A+K F+ R+GL  +G+ D 
Sbjct: 401 GPYQYDQVDDNIQYMQEMLKELGY--KVDRVDGYYSKATEEALKAFEKRYGLAVNGIYDK 458

Query: 160 S 160
           +
Sbjct: 459 N 459


>gi|260881076|ref|ZP_05403544.2| ErfK/YbiS/YcfS/YnhG family protein [Mitsuokella multacida DSM
           20544]
 gi|260849442|gb|EEX69449.1| ErfK/YbiS/YcfS/YnhG family protein [Mitsuokella multacida DSM
           20544]
          Length = 412

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 65/230 (28%), Gaps = 79/230 (34%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +++N+ A S+ A+ + +      V  G+V   TP  + ++     NP W           
Sbjct: 76  LVINLAARSIAAIRDNQKVALYPVGPGKVSTPTPTGYYKVIDKEVNPTWT---------- 125

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                 DP                       D ++  P         G  N +    I  
Sbjct: 126 ------DPG----------------------DASASIPS--------GPSNPLGYRWIGI 149

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
                   H T  P    ++  + ++GC+R+                     I ++V+  
Sbjct: 150 GGNYGI--HGTNRP---ESIGHYVSNGCIRMHE--------------EDVEKIYDMVEVG 190

Query: 376 KTTPVKLATEVPVHFVYISAWSPK--DSIIQF--RDDIYGLDNVHVGIIP 421
                      PV   Y      K  D  I +    D YG  NV    + 
Sbjct: 191 T----------PVEITYNRIVVEKTPDDQIAYYIYPDGYGWQNVTTADVN 230


>gi|225387902|ref|ZP_03757666.1| hypothetical protein CLOSTASPAR_01672 [Clostridium asparagiforme
           DSM 15981]
 gi|225046029|gb|EEG56275.1| hypothetical protein CLOSTASPAR_01672 [Clostridium asparagiforme
           DSM 15981]
          Length = 416

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   VQ+++E+L  I +     P       +      AV+ FQ   GL  +
Sbjct: 332 PGYDLTVGSSGPKVQQMQEQLDTIATVYSAIPRVNPDGIYGERTAEAVREFQSIFGLPQT 391

Query: 155 GMVDSSTLE 163
           G+V+ +T  
Sbjct: 392 GVVNFATWY 400


>gi|283796334|ref|ZP_06345487.1| spore cortex-lytic enzyme SleC [Clostridium sp. M62/1]
 gi|291075734|gb|EFE13098.1| spore cortex-lytic enzyme SleC [Clostridium sp. M62/1]
 gi|295091586|emb|CBK77693.1| Putative peptidoglycan-binding domain-containing protein
           [Clostridium cf. saccharolyticum K10]
 gi|295116196|emb|CBL37043.1| Putative peptidoglycan-binding domain-containing protein
           [butyrate-producing bacterium SM4/1]
          Length = 423

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLD 152
             P   L +G+    V++++E+L     +    P       +      AV+ FQ   GL 
Sbjct: 337 SFPGTDLTIGSRGSKVRQMQEQLDAIATIYTAIPRIQPDGIYGPATAEAVRTFQSIFGLP 396

Query: 153 PSGMVDSSTLE 163
            +G+VD +T  
Sbjct: 397 QTGVVDFATWY 407


>gi|302534605|ref|ZP_07286947.1| predicted protein [Streptomyces sp. C]
 gi|302443500|gb|EFL15316.1| predicted protein [Streptomyces sp. C]
          Length = 283

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 6/75 (8%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-----GLDPSGMV 157
             G +   V  L++ LI +G       ++  +    + AV  F  R+     GL     +
Sbjct: 210 KPGATHAQVAELQQLLIKAGYGPIKGAVTRFYGPETQRAVARFHDRNPAYRSGLH-DPRI 268

Query: 158 DSSTLEAMNVPVDLR 172
                 A+      R
Sbjct: 269 GPKGFVALQKQAGRR 283


>gi|196230054|ref|ZP_03128917.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
 gi|196225651|gb|EDY20158.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
          Length = 363

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 52/155 (33%), Gaps = 43/155 (27%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            LE + + KV     V VG     +PI H           W + +++ +   M   R DP
Sbjct: 226 MLEVLVDDKVAAAFPVTVGSQQTASPIGH-----------WTV-KAVAK---MPTFRYDP 270

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
             LK                           N +    PG  N +    I   ++    +
Sbjct: 271 LMLKKG-------------------ERSSHANLL---PPGPNNPVGVLWIAL-NKKGIGI 307

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
           H T +P   +++ R  + GC+R+ N     L   +
Sbjct: 308 HGTNDP---DSIGRNASHGCIRLANWDVVKLAGMV 339


>gi|157693918|ref|YP_001488380.1| peptidase [Bacillus pumilus SAFR-032]
 gi|157682676|gb|ABV63820.1| S41A subfamily peptidase [Bacillus pumilus SAFR-032]
          Length = 482

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 23/111 (20%)

Query: 82  IAFYQDILSRGGW-------PELPI--------------RPLHLGNSSVSVQRLRERLII 120
           +  Y+ +  +G W       P + I               PL L  ++  V++ +  L  
Sbjct: 352 LTLYKWLTPKGNWIHKKGVVPTIAIHQPDYFTVGPLQLKEPLQLDMNNEEVRQAQTLLKG 411

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
               DP + +   FD   + AV  FQ  + LD SG++D  T + MN  VD 
Sbjct: 412 LSF-DPGR-VDGYFDEETKKAVLAFQSTYNLDKSGVIDLKTAKMMNKMVDE 460


>gi|147773983|emb|CAN76268.1| hypothetical protein VITISV_004096 [Vitis vinifera]
          Length = 364

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           H G+ +  + +L+E     G +  S      FD   E A+K +Q+   L+ +G +D +TL
Sbjct: 53  HAGDKADGLAKLKEYFHYFGYIHNSNYTDD-FDDAFEQALKTYQLNFNLNTTGQLDXATL 111

Query: 163 EAMNVP 168
             +  P
Sbjct: 112 NQIVSP 117


>gi|300785513|ref|YP_003765804.1| lysozyme [Amycolatopsis mediterranei U32]
 gi|299795027|gb|ADJ45402.1| lysozyme [Amycolatopsis mediterranei U32]
          Length = 428

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L  G +  +V   +  L ++         G   +F    ++ V++FQ    L   G + 
Sbjct: 27  TLKQGATGAAVAEAQCELNLATKASRYTPIGADGSFGPATDARVRVFQKCAALSVDGQIG 86

Query: 159 SSTLEAMNVPVDLRIRQLQV 178
            +T  A+N     R R+   
Sbjct: 87  PNTWAALN-SWSARPRKCAT 105



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 21/66 (31%), Gaps = 4/66 (6%)

Query: 101 PLHLGNSSVSVQRLRERL---IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            L  G+S   V+ L+ RL   +  G   P        D      V  FQ        G+ 
Sbjct: 125 TLQSGSSGTDVKELQCRLNLAMEPGHYPPLTIDGQFGDGTRTR-VIQFQHCANASADGVA 183

Query: 158 DSSTLE 163
             +T  
Sbjct: 184 GPTTWA 189


>gi|255654572|ref|ZP_05399981.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-23m63]
 gi|296449345|ref|ZP_06891127.1| spore cortex-lytic enzyme SleC [Clostridium difficile NAP08]
 gi|296880721|ref|ZP_06904673.1| spore cortex-lytic enzyme SleC [Clostridium difficile NAP07]
 gi|296261815|gb|EFH08628.1| spore cortex-lytic enzyme SleC [Clostridium difficile NAP08]
 gi|296428294|gb|EFH14189.1| spore cortex-lytic enzyme SleC [Clostridium difficile NAP07]
          Length = 423

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLD 152
             P   L +G+S   V+ ++ +L    +  P+         +    E+AV++FQ   GL 
Sbjct: 334 SFPGTTLQVGSSGQYVRTIQNQLNAISNSYPAVPKVIEDGIYGTDTENAVRIFQGIFGLP 393

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            SG+VD  T   ++       R   +N
Sbjct: 394 QSGVVDFKTWYEISRVYVATTRIASLN 420


>gi|153853426|ref|ZP_01994835.1| hypothetical protein DORLON_00824 [Dorea longicatena DSM 13814]
 gi|149754212|gb|EDM64143.1| hypothetical protein DORLON_00824 [Dorea longicatena DSM 13814]
          Length = 102

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V +++E+L +I+G     P       +      +V+ FQ   GL  +
Sbjct: 17  PGYTLEIGSSGNKVLQMQEQLNVIAGAYPAIPKITADGIYGPATAESVRTFQKVFGLPQT 76

Query: 155 GMVDSSTLE 163
           G VD +T  
Sbjct: 77  GTVDYTTWY 85


>gi|218528934|ref|YP_002419750.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium chloromethanicum CM4]
 gi|218521237|gb|ACK81822.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium chloromethanicum CM4]
          Length = 250

 Score = 41.7 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 14/82 (17%)

Query: 92  GGWPELPIRPLH------LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           G W  +P  P+       +G++   V+ L+  L + G   P  G    FDA + + V  F
Sbjct: 166 GHW--VPTAPVRDGRFFAMGDTGQPVEALQAMLALYGYEQPVTG---HFDAAMRAVVTAF 220

Query: 146 QMRHGLDP--SGMVDSSTLEAM 165
           Q RH       G+ DSST+  +
Sbjct: 221 Q-RHFRPARIDGVADSSTITTL 241


>gi|222149174|ref|YP_002550131.1| hypothetical protein Avi_2943 [Agrobacterium vitis S4]
 gi|221736159|gb|ACM37122.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 423

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 53/168 (31%), Gaps = 48/168 (28%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L   E+G++       +G  D  +P    ++ R+ F                     DP 
Sbjct: 301 LAYGEDGQLITAYPASIGSNDTPSPSGTVQVQRVAF---------------------DPG 339

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNTYM 323
           Y    N  +  ++G    V  +               PG    + +  I           
Sbjct: 340 Y--TYNPKVNFQQGANDKVLNI--------------PPGPNGPVGTVWIALSKPTYGI-- 381

Query: 324 HDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIE 369
           H TPEP     + R ++ GC+R+ N    +L   +    P  +   I+
Sbjct: 382 HGTPEPS---KIGRTQSHGCIRLTNWDATELAKMV---QPGVTVEFID 423


>gi|150018201|ref|YP_001310455.1| peptidoglycan binding domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149904666|gb|ABR35499.1| Peptidoglycan-binding domain 1 protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 309

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 7/59 (11%)

Query: 109 VSVQRLRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +Q ++++L   G +    G++    ++      V  FQ  +GL   GMV SSTL A+
Sbjct: 66  TDIQLIQQQLNSKGYVLTVDGIAGINTYNT-----VVKFQRENGLVADGMVGSSTLAAL 119


>gi|258624358|ref|ZP_05719307.1| VgrG protein [Vibrio mimicus VM603]
 gi|258583509|gb|EEW08309.1| VgrG protein [Vibrio mimicus VM603]
          Length = 1040

 Score = 41.7 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 13/79 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH--------- 149
                 GN+S  V+ L++ LI  G      G    F    ++A++ FQ  +         
Sbjct: 722 ASAYRQGNNSEEVRLLQQALIKLGFDLGKAGADGDFGGKTKTAIEQFQKSYQPSHQTHPS 781

Query: 150 ---GLDPSGMVDSSTLEAM 165
              G    G+V + TL A+
Sbjct: 782 YSIG-PVDGIVGNGTLLAL 799


>gi|326332362|ref|ZP_08198641.1| LigA [Nocardioidaceae bacterium Broad-1]
 gi|325949851|gb|EGD41912.1| LigA [Nocardioidaceae bacterium Broad-1]
          Length = 388

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 5/86 (5%)

Query: 96  ELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +P  R L  G     V++L + L   G       +   +      AV  +Q   G++ +
Sbjct: 136 TVPAWRDLAPGVEGKDVKQLEKNLWALGY--RGFDVDEDYTYATADAVAEWQEDLGVEET 193

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNL 180
           G +   T + +  P  +RI  L  +L
Sbjct: 194 GKI--RTGDVVVQPAAVRIGSLSASL 217


>gi|303239377|ref|ZP_07325905.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
 gi|302593163|gb|EFL62883.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
          Length = 235

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 88  ILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           I+  G +       R L  G+    V  ++++L   G     +  +  ++  ++ A+  F
Sbjct: 152 IIKNGSFGPFGTGFRELLPGDRGADVLAVQQKLKTLGYFHSKE--TGIYEDDLKYALHKF 209

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q    L+    +  +   AM
Sbjct: 210 QKDKKLEVKNAITRADYHAM 229


>gi|302551078|ref|ZP_07303420.1| peptidoglycan-binding membrane protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468696|gb|EFL31789.1| peptidoglycan-binding membrane protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 319

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVD 158
            L LG+    V  L+ RL            +  +D  +E AV+ +Q   G+     G+  
Sbjct: 248 TLRLGDRGPEVTELQLRLRQLSLYVEDDDGT--YDEGLEDAVRTYQWSRGIQDDDLGVYG 305

Query: 159 SSTLEAM 165
             T   +
Sbjct: 306 RGTRTRL 312


>gi|301629918|ref|XP_002944079.1| PREDICTED: matrix metalloproteinase-21-like, partial [Xenopus
           (Silurana) tropicalis]
          Length = 568

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDLRI 173
           D      L +  +     A++ FQ  + L+ +G +D++T+ AMNVP     D R+
Sbjct: 47  DSVSPTDLELTLNPRFNGALRRFQEANKLEVTGRLDAATIMAMNVPRCGVPDHRV 101


>gi|301606175|ref|XP_002932698.1| PREDICTED: matrix metalloproteinase-21-like [Xenopus (Silurana)
           tropicalis]
          Length = 604

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                A+K FQ  + L  +G++D +T+ AMN P
Sbjct: 101 PQFIDALKKFQKLNNLPATGILDDATINAMNKP 133


>gi|16901508|gb|AAL27029.1| matrix metalloproteinase MMP2 [Glycine max]
          Length = 357

 Score = 41.7 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFD-AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S+  V  +++ L   G ++ S  LS + D   + SA+K +Q  + L P+G +++ TL+ M
Sbjct: 74  SAPPVSLIKDYLSNYGYIESSGPLSNSMDQETIISAIKTYQQYYCLQPTGKLNNETLQQM 133


>gi|301627877|ref|XP_002943093.1| PREDICTED: matrix metalloproteinase-17, partial [Xenopus (Silurana)
           tropicalis]
          Length = 518

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    S        +  AVK  Q   GL  +G +D +T+  MN P
Sbjct: 3   LTRYGYLPPPDPFSARQQTLEGLREAVKAMQRVAGLPETGELDDATVRMMNKP 55


>gi|332970006|gb|EGK09005.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. 1501(2011)]
          Length = 455

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 46/162 (28%), Gaps = 51/162 (31%)

Query: 194 RYVLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
             V+ +  + +L A +   K+       VG     +P    ++   + +P          
Sbjct: 329 TRVVADKNSQTLYAYDKQDKLVASYPTTVGSTATPSPTGTHKVQTKVSDP---------- 378

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
                            N    D  GK+  +                  PG  N +    
Sbjct: 379 -----------------NYTHTDGDGKQTII-----------------PPGPNNPVGRVW 404

Query: 313 IEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           I           H +P+P     + R  ++GC+R+ N   L 
Sbjct: 405 IGLSKPSYGI--HGSPDP---ERISRQASAGCIRLTNWDALA 441


>gi|317489962|ref|ZP_07948454.1| ykud domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|316910960|gb|EFV32577.1| ykud domain-containing protein [Eggerthella sp. 1_3_56FAA]
          Length = 552

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 54/159 (33%), Gaps = 31/159 (19%)

Query: 101 PLHLGNSSVSVQRLRE-------RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD- 152
            L LG++   V ++         RL     +   +GL  A+   + SA   +Q R     
Sbjct: 304 SLKLGDT--PVAQVNADAIAGWVRLHDDVTVGVDEGLVAAWVQDLASACNTYQARRTFTR 361

Query: 153 PSG------------MVDSSTLEA--MNVPVDLRIRQLQVNLMRIKK----LLEQKMGLR 194
             G            ++D   L+   MN     +   + +   +       L  +  G R
Sbjct: 362 ADGKEVTVSGGVYGWIIDKDKLQEALMNGVDSAQTGDMAIPCEQEAGAYDGLHGRDWGKR 421

Query: 195 YVLVNIPAASLEAVEN-GKVGLRSTVIVGRVD--RQTPI 230
           YV V++        ++ G +   S V+ G  D    TP 
Sbjct: 422 YVDVDLTEQHARFYDDEGSLAWESDVVTGTPDGEHDTPE 460


>gi|225575004|ref|ZP_03783614.1| hypothetical protein RUMHYD_03083 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037779|gb|EEG48025.1| hypothetical protein RUMHYD_03083 [Blautia hydrogenotrophica DSM
           10507]
          Length = 416

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA---FDAYVESAVKLFQMRHG 150
           WP      L +G +   V++++E+L       P+         +D   ++AV+ FQ   G
Sbjct: 331 WPRYD---LDIGANGAKVRQIQEQLNAIAKSYPALPTVTVNGDYDEQTKNAVRQFQGVFG 387

Query: 151 LDPSGMVDSSTLE 163
           L  +G+VD ST  
Sbjct: 388 LPETGIVDYSTWY 400


>gi|194015385|ref|ZP_03054001.1| S41A subfamily peptidase [Bacillus pumilus ATCC 7061]
 gi|194012789|gb|EDW22355.1| S41A subfamily peptidase [Bacillus pumilus ATCC 7061]
          Length = 482

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 23/111 (20%)

Query: 82  IAFYQDILSRGGW-------PELPI--------------RPLHLGNSSVSVQRLRERLII 120
           +  Y+ +  +G W       P + I               PL L  ++  V++ +  L  
Sbjct: 352 LTLYKWLTPKGNWIHKKGVVPTIAIHQPDYFTVGPLQLKEPLQLDMNNEEVRQAQTLLKG 411

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
               DP + +   FD   + AV  FQ  + LD SG++D +T + MN  VD 
Sbjct: 412 LSF-DPGR-VDGYFDEETKKAVLAFQSTYNLDKSGVIDLNTAKMMNKMVDE 460


>gi|192292423|ref|YP_001993028.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris TIE-1]
 gi|192286172|gb|ACF02553.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris TIE-1]
          Length = 288

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 15/100 (15%)

Query: 86  QDILSRG--GWPE----LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           + + + G   W E    +P   L  G     V+ +++ L   G   P  G   ++D    
Sbjct: 187 RSLAASGVGLWVEPARIVPGPALKQGTEGDEVRLMQQALADYGYRVPVNG---SYDHATT 243

Query: 140 SAVKLFQMRHGL-DPSGMVDSSTLEAM-----NVPVDLRI 173
             V  FQ         G+ D+STL  +      +PV+ R 
Sbjct: 244 DVVTAFQRHFRPEKVDGIADASTLATLHALLARLPVEARA 283


>gi|226311843|ref|YP_002771737.1| spore cortex-lytic enzyme precursor [Brevibacillus brevis NBRC
           100599]
 gi|226094791|dbj|BAH43233.1| probable spore cortex-lytic enzyme precursor [Brevibacillus brevis
           NBRC 100599]
          Length = 261

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G     V+ ++ RL   G       +   F      A++ FQ   GL   G++ + T
Sbjct: 38  KVGEEGSDVREMQYRLKHLGFYTG--KVDGVFGWRSYWALRNFQYEFGLPIDGVLGAQT 94


>gi|158426173|ref|YP_001527465.1| N-acetylmuramoyl-L-alanine amidase [Azorhizobium caulinodans ORS
           571]
 gi|158333062|dbj|BAF90547.1| N-acetylmuramoyl-L-alanine amidase [Azorhizobium caulinodans ORS
           571]
          Length = 274

 Score = 41.7 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 4/72 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR-HGLDP 153
           P+   R L +G+S   +  L+  L + G       ++  +D      V  FQ        
Sbjct: 177 PKGGGRFLMMGDSGQPIAALQAMLALYGY---GIEVTGLYDEATRDVVMAFQRHFRRSQV 233

Query: 154 SGMVDSSTLEAM 165
            G+ D ST+  +
Sbjct: 234 DGVADGSTILTL 245


>gi|331269415|ref|YP_004395907.1| N-acetylmuramoyl-L-alanine amidase-like protein [Clostridium
           botulinum BKT015925]
 gi|329125965|gb|AEB75910.1| N-acetylmuramoyl-L-alanine amidase-like protein [Clostridium
           botulinum BKT015925]
          Length = 272

 Score = 41.4 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 3/63 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI       + G    F     +++K FQ    L   G+V  +T 
Sbjct: 210 KQGARGNITKIIQKILINKNYKIQADG---IFGEATVNSIKHFQGNKNLVQDGVVGKNTW 266

Query: 163 EAM 165
           +A+
Sbjct: 267 KAL 269


>gi|319407603|emb|CBI81253.1| putative membrane-bound lytic murein transglycosylase [Bartonella
           sp. 1-1C]
          Length = 418

 Score = 41.4 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+ RL   GD D      +      + A+K FQ+RHGL+ +G  +  TL  +
Sbjct: 365 ELQSRLAKLGDYDGEIDGKIG--TATKKAIKAFQLRHGLEENGYPNYETLSHI 415


>gi|163850374|ref|YP_001638417.1| N-acetylmuramoyl-L-alanine amidase [Methylobacterium extorquens
           PA1]
 gi|163661979|gb|ABY29346.1| N-acetylmuramoyl-L-alanine amidase family 2 [Methylobacterium
           extorquens PA1]
          Length = 250

 Score = 41.4 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 10/80 (12%)

Query: 92  GGW-PELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W P  P+R      +G++   V+ L+  L + G   P  G    FDA + + V  FQ 
Sbjct: 166 GHWVPPAPVRDGRFFAMGDTGQPVEALQAMLALYGYEQPVTG---HFDAAMRAVVTAFQ- 221

Query: 148 RHGLDP--SGMVDSSTLEAM 165
           RH       G+ DSST+  +
Sbjct: 222 RHFRPARIDGVADSSTITTL 241


>gi|89056490|ref|YP_511941.1| peptidoglycan binding domain-containing protein [Jannaschia sp.
           CCS1]
 gi|88866039|gb|ABD56916.1| Peptidoglycan-binding domain 1 [Jannaschia sp. CCS1]
          Length = 568

 Score = 41.4 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 14/89 (15%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
            T + IA  +   ++   P +  R L           + +RL + G LDP + +   FD 
Sbjct: 478 FTPQQIAQLEAREAQLNLPPV-TRSL-----------VEQRLTVLG-LDPGR-VDGRFDD 523

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               AV+ +Q   G+D +G +D  T+  +
Sbjct: 524 STRRAVRRYQQARGMDVTGYLDQQTVVRL 552


>gi|114320621|ref|YP_742304.1| lytic murein transglycosylase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227015|gb|ABI56814.1| lytic murein transglycosylase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 400

 Score = 41.4 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 26/78 (33%), Gaps = 3/78 (3%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            I   G     P  P        +V+RL+E L   G    +  +          AV+ FQ
Sbjct: 319 RIAGTGDLKTRPAEPPEA-MRIEAVKRLQETLNALGY--EAGPVDGQPGRQTRKAVRAFQ 375

Query: 147 MRHGLDPSGMVDSSTLEA 164
              GL   G      L+A
Sbjct: 376 QDAGLPADGHPSPRVLQA 393


>gi|288916296|ref|ZP_06410675.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
 gi|288352275|gb|EFC86473.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
          Length = 263

 Score = 41.4 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           F A    AVK FQ+  GL P G+    T   +
Sbjct: 231 FGAKTTEAVKTFQVSRGLKPDGVFGPVTHSYL 262


>gi|190575450|ref|YP_001973295.1| putative peptidoglycan-binding ErfK/YbiS/YcfS/YnhG protein
           [Stenotrophomonas maltophilia K279a]
 gi|190013372|emb|CAQ47006.1| putative peptidoglycan binding ErfK/YbiS/YcfS/YnhG protein
           [Stenotrophomonas maltophilia K279a]
          Length = 320

 Score = 41.4 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 6/53 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            PG  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N   L
Sbjct: 257 PPGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRMTNWDAL 304



 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVES----AVKLFQMRHGLDPSGMVDSSTLEAM 165
           R  L     LD +       D  V S    AV  FQ  HGL  +G +D +T +A+
Sbjct: 44  RSALHAQVLLDRANFSPGQIDGEVGSNQRRAVSGFQAAHGLTVTGELDDATWQAL 98


>gi|15614194|ref|NP_242497.1| spore cortex-lytic enzyme [Bacillus halodurans C-125]
 gi|25453281|sp|Q9KCE0|SLEB_BACHD RecName: Full=Spore cortex-lytic enzyme; Short=SCLE; Flags:
           Precursor
 gi|10174248|dbj|BAB05350.1| spore cortex-lytic enzyme [Bacillus halodurans C-125]
          Length = 330

 Score = 41.4 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +   V  L+ RL   G  +  K +   F      AV+ +Q   G++  G+V       
Sbjct: 38  GATGDDVVELQARLQYIGFYN--KKIDGVFGWSTYWAVRNYQYEFGMEVDGLVGPEMKAK 95

Query: 165 M 165
           +
Sbjct: 96  L 96


>gi|302336335|ref|YP_003801542.1| Peptidoglycan-binding domain 1 protein [Olsenella uli DSM 7084]
 gi|301320175|gb|ADK68662.1| Peptidoglycan-binding domain 1 protein [Olsenella uli DSM 7084]
          Length = 303

 Score = 41.4 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 12/87 (13%)

Query: 89  LSRGGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           +    W  L      +G+              V +++ERL I G           F  Y 
Sbjct: 60  VDAPTWSALVDAGYTMGDRTLYLRLPNFHGNDVLQMQERLNILGF--SCGKPDGCFGVYT 117

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           E+AVK FQ   G+   GM    T +++
Sbjct: 118 EAAVKEFQESQGMLADGMAFQDTFDSI 144



 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           P+  G S  +V+ ++ERL   G  +D ++    +      +AV  F++  G+     VD+
Sbjct: 3   PIREGASGAAVEDIQERLGRLGYEIDEAELAEKSMGPSSVAAVAKFRLDQGMGLGTEVDA 62

Query: 160 STLEAM 165
            T  A+
Sbjct: 63  PTWSAL 68


>gi|146343733|ref|YP_001208781.1| hypothetical protein BRADO6980 [Bradyrhizobium sp. ORS278]
 gi|146196539|emb|CAL80566.1| conserved hypothetical protein; putative signal peptide; Putative
           peptidoglycan-binding domain-containing protein
           [Bradyrhizobium sp. ORS278]
          Length = 324

 Score = 41.4 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 48/150 (32%), Gaps = 45/150 (30%)

Query: 204 SLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
           S++A + +G         VG  D+ TP+   +++ I  NP                 R +
Sbjct: 200 SVQAFDKDGNRVAMLPATVGSDDKPTPVGSFKVDSIDANP---------------NYRYN 244

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNN 320
           P Y                      +   +     F   PG  N + S  I     +   
Sbjct: 245 PDY---------------------KFKGVKARK-PFDIKPGPNNPVGSYWIGLSIGNGYG 282

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              H T EP     V + E+ GCVR+ N  
Sbjct: 283 I--HGTAEP---AKVGKTESHGCVRLTNWD 307


>gi|254503418|ref|ZP_05115569.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222439489|gb|EEE46168.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 257

 Score = 41.4 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           L+ RL + G                 +A+K FQ+   + P+G+ D++T++A+ +  D R 
Sbjct: 29  LQMRLNVHG---AQITEDGVIGNETTAALKAFQIARHIKPTGIADAATVKALRISSDQRR 85

Query: 174 R 174
           R
Sbjct: 86  R 86


>gi|301620574|ref|XP_002939653.1| PREDICTED: matrix metalloproteinase-21-like [Xenopus (Silurana)
           tropicalis]
          Length = 902

 Score = 41.4 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 22/121 (18%)

Query: 74  TIAQTEKAIAFYQDIL----SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           T    ++ +  Y  +         + + P+  L   + S         LI  G+ +    
Sbjct: 426 TPEAAQQYLVKYGWVAPVNWEEQAFTDFPVHDLAPQDVSQ--------LISEGESEEHPR 477

Query: 130 LSVAFDAYVE------SAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDLRIRQLQVN 179
           +S + +   E       ++K FQ  +GL  +G++DS+T  AMN P     D ++   + N
Sbjct: 478 VSNSSENETEINPSFIDSLKKFQDANGLTATGVLDSATKIAMNKPRCGVPDFKVASRRKN 537

Query: 180 L 180
            
Sbjct: 538 A 538


>gi|239627635|ref|ZP_04670666.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517781|gb|EEQ57647.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 420

 Score = 41.4 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L LG++   V++++E+L  I +     P       +      AV+ FQ   GL  +
Sbjct: 336 PGNDLTLGSTGDKVRQMQEQLDMIATVYTAIPRVTPDGIYGPRTADAVREFQSIFGLPQT 395

Query: 155 GMVDSSTLE 163
           G+VD +T  
Sbjct: 396 GVVDFATWY 404


>gi|157691940|ref|YP_001486402.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus SAFR-032]
 gi|157680698|gb|ABV61842.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus SAFR-032]
          Length = 299

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 5/95 (5%)

Query: 70  ISKETIAQTEKAIAFYQDILSR-GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD--- 125
           IS     Q  + +  Y++        P+  I+          V+ +++ L          
Sbjct: 193 ISDPNKIQIGQVLKIYRNDAKSLYNLPDGVIKVTSPLTKGEHVRLVQQALAAVYFYPDKA 252

Query: 126 -PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             +KG+   +     +AV  FQ+ +GL   G+   
Sbjct: 253 AANKGIDGVYGEKTANAVARFQLVNGLPSDGVYGP 287


>gi|254470560|ref|ZP_05083964.1| N-acetylmuramoyl-L-alanine amidase [Pseudovibrio sp. JE062]
 gi|211960871|gb|EEA96067.1| N-acetylmuramoyl-L-alanine amidase [Pseudovibrio sp. JE062]
          Length = 252

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSS 160
              G+    ++ L+  L + G       +S  FD     AV+ FQ         G+ D+ 
Sbjct: 181 FQEGDEGQPIEALQSLLGLYGY---DVMVSGVFDEKTRFAVEAFQRHFRPAKVDGIADAQ 237

Query: 161 TLEAM 165
           T+  +
Sbjct: 238 TIATL 242


>gi|298249255|ref|ZP_06973059.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
 gi|297547259|gb|EFH81126.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
          Length = 202

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   F    + AV  FQ  +GLDP G+V   T  A+
Sbjct: 163 AVDGQFGVLTQQAVFDFQDYYGLDPDGIVGPRTWHAL 199


>gi|149912610|ref|ZP_01901144.1| hypothetical protein RAZWK3B_01440 [Roseobacter sp. AzwK-3b]
 gi|149813016|gb|EDM72842.1| hypothetical protein RAZWK3B_01440 [Roseobacter sp. AzwK-3b]
          Length = 204

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 14/115 (12%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQR 113
           N  A+V+    S +  ++   ++  E+A+   +   +      + +RP         +Q 
Sbjct: 99  NRDAQVEAVTASALATLAPLAVSAPEEAVELRRAEAA------VRMRP-------SVLQG 145

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           ++ERL I+ +L P +     +      A+  FQ   GL+P+G+ D+ T+  + V 
Sbjct: 146 VQERL-ITRELLPEESADGVYGEQTAKALARFQEDTGLEPTGLPDAWTVFVLQVS 199


>gi|242073696|ref|XP_002446784.1| hypothetical protein SORBIDRAFT_06g022520 [Sorghum bicolor]
 gi|241937967|gb|EES11112.1| hypothetical protein SORBIDRAFT_06g022520 [Sorghum bicolor]
          Length = 367

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R L  G     V+ ++E L+  G     + +   +F +  E AVK +Q   G   +G++ 
Sbjct: 162 RTLRAGAEGEDVRAMQEALLKLGFYSGEEDMEYSSFSSGTERAVKTWQSTVGTSENGVMT 221

Query: 159 SSTLEAM 165
           S  LE +
Sbjct: 222 SELLEWL 228


>gi|58425396|gb|AAW74433.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 365

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
            PG  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N  
Sbjct: 302 PPGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWD 347


>gi|323141957|ref|ZP_08076813.1| NlpC/P60 family protein [Phascolarctobacterium sp. YIT 12067]
 gi|322413571|gb|EFY04434.1| NlpC/P60 family protein [Phascolarctobacterium sp. YIT 12067]
          Length = 306

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++L + G  D     S        SA+K FQ +H L   G ++ +T + +
Sbjct: 118 QKLQVLGFSDERP--SGRMTEATSSALKSFQKQHKLKADGELNDATYQKL 165


>gi|325956760|ref|YP_004292172.1| hypothetical protein LAC30SC_05425 [Lactobacillus acidophilus 30SC]
 gi|325333325|gb|ADZ07233.1| hypothetical protein LAC30SC_05425 [Lactobacillus acidophilus 30SC]
          Length = 366

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             ++    +AVK FQ RH L  +G +D  T + ++     
Sbjct: 169 NLYNPATYNAVKNFQRRHNLPATGDIDLKTWQKLDFSKAS 208


>gi|291446759|ref|ZP_06586149.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291349706|gb|EFE76610.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 417

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 6/135 (4%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ-- 86
            P  A+V+   +  +    V+ R D    R           ++        +  A Y+  
Sbjct: 101 PPATATVVRTDLVLART--VDGRIDFAQRRAVKAAVEGTVTVAAAEGRTVRRGEALYELN 158

Query: 87  DILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           D      +  +P  R +  G+    V +L   L   G       +   +    E+AVK +
Sbjct: 159 DKPVTLLYGPVPAFREMKTGHRGSDVLQLERNLRDLGY-GAGLHVDTEYGEDTEAAVKRW 217

Query: 146 QMRHGLDPSGMVDSS 160
           Q     + +G V   
Sbjct: 218 QKHLNRETTGRVGRG 232


>gi|317494173|ref|ZP_07952589.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917946|gb|EFV39289.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 306

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N     L     G K  +   + +G + R TP+             WV   S+ +K 
Sbjct: 101 IIINSAEMRLYYYPKGSKTVVVLPIGIGELGRDTPM------------NWV--TSVQRK- 145

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                +  P +     +H       E+  +                  G  N M    + 
Sbjct: 146 -----KAGPTWTPTKKMHEEYAANGEILPQVF--------------PAGPDNPMGLYALY 186

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI-----E 369
                    H T     F   +R  + GCVR+R+  D   +L  + P  +R        +
Sbjct: 187 IGRLYAV--HGTNAN--FGIGLR-VSHGCVRLRD--DDIKYLFDNVPVGTRLQFINEPVK 239

Query: 370 EVVKTRKTTPVKLATEV 386
             V+   +  +++   +
Sbjct: 240 ATVEPDGSRYIEVHNPL 256


>gi|254522184|ref|ZP_05134239.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas sp. SKA14]
 gi|219719775|gb|EED38300.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas sp. SKA14]
          Length = 319

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 6/53 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            PG  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N   L
Sbjct: 256 PPGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRMTNWDAL 303



 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 5/62 (8%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVES----AVKLFQMRHGLDPSGMVDSSTLE 163
              +   R  L     LD +       D  V S    AV  FQ  HGL  +G +D +T +
Sbjct: 37  GPDIAA-RSPLHAQVLLDRANFSPGQIDGEVGSNQRRAVSGFQAAHGLTVTGELDEATWK 95

Query: 164 AM 165
           A+
Sbjct: 96  AL 97


>gi|240137450|ref|YP_002961921.1| N-acetylmuramoyl-L-alanine amidase (AGR_C_3833p) [Methylobacterium
           extorquens AM1]
 gi|240007418|gb|ACS38644.1| N-acetylmuramoyl-L-alanine amidase (AGR_C_3833p) [Methylobacterium
           extorquens AM1]
          Length = 250

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 10/80 (12%)

Query: 92  GGW-PELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W P  P+R      +G++   V+ L+  L + G   P  G    FDA + + V  FQ 
Sbjct: 166 GHWVPPAPVRDGRFFAMGDTGQPVEALQAMLALYGYEQPVTG---HFDAAMRAVVTAFQ- 221

Query: 148 RHGLDP--SGMVDSSTLEAM 165
           RH       G+ DSST+  +
Sbjct: 222 RHFRPARIDGVADSSTITTL 241


>gi|282865059|ref|ZP_06274112.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
 gi|282559982|gb|EFB65531.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
          Length = 426

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 27/89 (30%), Gaps = 9/89 (10%)

Query: 86  QDILSRGG----WPELPIR-PLHLGNSSVSVQRLRERLIISGD----LDPSKGLSVAFDA 136
           + I + GG     P  P R     G S+  VQRL  +L+  G                D 
Sbjct: 336 RTIPAAGGGADEAPAFPGRGSFRPGQSNSDVQRLGTQLVKKGYGRYYAKGPDRRWTEADR 395

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               A +  Q   G    G     T   +
Sbjct: 396 RNVEAFQKAQGWRGSAADGYPGPETWRRL 424


>gi|224053424|ref|XP_002297812.1| predicted protein [Populus trichocarpa]
 gi|222845070|gb|EEE82617.1| predicted protein [Populus trichocarpa]
          Length = 395

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           + L  G+    V+ +++ L   G     + +   +F +  E AV+ +Q   G    G++ 
Sbjct: 177 KTLRKGSEGEQVKEMQDALQKLGFYSGEEDMEYSSFSSGTERAVRTWQASLGASEDGIMT 236

Query: 159 SSTLEAM 165
           +  L+ +
Sbjct: 237 TELLKRL 243


>gi|15616161|ref|NP_244466.1| carboxy-terminal processing protease [Bacillus halodurans C-125]
 gi|10176223|dbj|BAB07318.1| carboxy-terminal processing protease [Bacillus halodurans C-125]
          Length = 479

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL L   +  ++  +  L   G           F+   E AV+ FQ    L+ +G++D  
Sbjct: 388 PLELDMLNDQIEHAQMMLKGLGFEPG--RTDGYFEEQTEKAVRAFQDSQELETTGVLDEE 445

Query: 161 TLEAMNVPVDLRIR------QLQVNL 180
           T  A+   +   +R      QL+V L
Sbjct: 446 TAIALQQSIVDLVRDQENDQQLRVAL 471


>gi|186684874|ref|YP_001868070.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186467326|gb|ACC83127.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 276

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 111 VQRLRERLIISGDLDPS--KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           V+ L+ RL   G   P+        +     +AVK FQ   GL  +G+      + +  P
Sbjct: 109 VKGLQNRLKFHGFATPAEIPQDKPFYGPATYTAVKKFQKSQGLTENGIATFEQRQILQQP 168


>gi|168187475|ref|ZP_02622110.1| lysin [Clostridium botulinum C str. Eklund]
 gi|169294640|gb|EDS76773.1| lysin [Clostridium botulinum C str. Eklund]
          Length = 257

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           P+  G+    V+ +++ L   G+     G    +      AV  FQ  +GL   G+V ++
Sbjct: 196 PMQYGD---DVKLIQKYLNKYGNYCNIDG---WYGFNTRKAVMNFQNTNGLSVDGIVGNN 249

Query: 161 TLEAM 165
           T + +
Sbjct: 250 TWDVL 254


>gi|163760769|ref|ZP_02167849.1| LysM-repeat protein and domain [Hoeflea phototrophica DFL-43]
 gi|162282091|gb|EDQ32382.1| LysM-repeat protein and domain [Hoeflea phototrophica DFL-43]
          Length = 98

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA---FDAYVESAVKLFQMRHGLDPSGMV 157
            L  G++   V  L+  L+     D           F    E+AVK +Q +  L   G+V
Sbjct: 6   TLSKGSAGEDVSALQHGLLQVAGADTPTDPGPIDGKFGQKTEAAVKAYQTQLKLKADGIV 65

Query: 158 DSSTL 162
              T 
Sbjct: 66  GDLTW 70


>gi|297517138|ref|ZP_06935524.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           OP50]
          Length = 171

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDM 255
                I Q+ +
Sbjct: 148 TPTAGIRQRSL 158


>gi|255541150|ref|XP_002511639.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
 gi|223548819|gb|EEF50308.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
          Length = 363

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+    + +L+      G L       ++  FD  +ESAV  +Q + GL  +G +D +
Sbjct: 59  RRGSHVSGMSQLKRYFHHFGYLPLRDFDNITDTFDVPLESAVFRYQAKLGLPITGELDFN 118

Query: 161 TLEAM 165
           T+  +
Sbjct: 119 TVSQL 123


>gi|168178137|ref|ZP_02612801.1| putative phage related N-acetylmuramoyl-L-alanine amidase
           [Clostridium botulinum NCTC 2916]
 gi|182670829|gb|EDT82803.1| putative phage related N-acetylmuramoyl-L-alanine amidase
           [Clostridium botulinum NCTC 2916]
          Length = 238

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             +  +   +V+ ++ +L   G      G+   F      +VK FQ    L   G+V   
Sbjct: 169 KYNPNSFDANVKVIQSKLQNIGYSVGKSGVDGYFGDGTLLSVKCFQRDCNLYVDGIVGKD 228

Query: 161 TLEAM 165
           T + +
Sbjct: 229 TWKVL 233


>gi|85717364|ref|ZP_01048316.1| Lytic murein transglycosylase [Nitrobacter sp. Nb-311A]
 gi|85695839|gb|EAQ33745.1| Lytic murein transglycosylase [Nitrobacter sp. Nb-311A]
          Length = 407

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             VQ ++ RL  +G    + G           AVK FQ R GL P G      L  +
Sbjct: 349 AEVQEVQTRLTKAGF--DTGGTDGRVGNDTMKAVKDFQTRAGLPPDGYAGLKVLSKL 403


>gi|297824541|ref|XP_002880153.1| matrix metalloproteinase [Arabidopsis lyrata subsp. lyrata]
 gi|297325992|gb|EFH56412.1| matrix metalloproteinase [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 3/58 (5%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            VS+  ++  L   G L          D   E A+  +Q   GL  +G  DS TL  +
Sbjct: 40  DVSIPEIKRHLQQYGYLPQKNEPD---DVSFEQALARYQKNLGLPITGKPDSDTLSQI 94


>gi|291451685|ref|ZP_06591075.1| lipoprotein [Streptomyces albus J1074]
 gi|291354634|gb|EFE81536.1| lipoprotein [Streptomyces albus J1074]
          Length = 280

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   +  G +S  V+ L+ RL   G    S   +  +      AV  +Q +  L  +G  
Sbjct: 72  PAVLMRPGQTSEQVRELQARLASLGLFGRSP--TGFYGDVTSEAVSAYQRKGALPVTGTT 129

Query: 158 DSSTLEAM 165
           D+ T + +
Sbjct: 130 DAVTWDRL 137


>gi|225433438|ref|XP_002285669.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 372

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           + L +G+    V+ ++E L   G     + +   +F +  E AVK +Q   G   +G++ 
Sbjct: 154 KTLRVGSEGEEVRAMQEALQNLGFYSGEEDVEFSSFSSGTERAVKTWQASLGAPENGIMT 213

Query: 159 SSTLEAM 165
           +  LE +
Sbjct: 214 AELLERL 220


>gi|196233249|ref|ZP_03132095.1| Peptidoglycan-binding domain 1 protein [Chthoniobacter flavus
           Ellin428]
 gi|196222720|gb|EDY17244.1| Peptidoglycan-binding domain 1 protein [Chthoniobacter flavus
           Ellin428]
          Length = 296

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 6/55 (10%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            LR R I  GD+D            +E A+K +Q R GL  SGM D  TL ++ V
Sbjct: 29  ELRRRNIYFGDIDGRAS------PELEQALKHYQKRKGLAVSGMNDHDTLRSLGV 77


>gi|297741928|emb|CBI33363.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           + L +G+    V+ ++E L   G     + +   +F +  E AVK +Q   G   +G++ 
Sbjct: 20  KTLRVGSEGEEVRAMQEALQNLGFYSGEEDVEFSSFSSGTERAVKTWQASLGAPENGIMT 79

Query: 159 SSTLEAM 165
           +  LE +
Sbjct: 80  AELLERL 86


>gi|91201948|emb|CAJ75008.1| hypothetical protein kuste4246 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 314

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 11/84 (13%)

Query: 165 MNVPVDLRIRQLQVNL-MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           +N   D R     +N+  ++K L     G   +L++    +L  + N +   +  +  G+
Sbjct: 167 INKKPDSR-----LNIGEKLKIL----KGKTKILISKSEFTLTVLLNDRYVKQYRIGTGK 217

Query: 224 VDRQTPILHSRINRIMFNPYWVIP 247
            D +TP     +   M NP W  P
Sbjct: 218 ND-KTPEGTFEVKNKMKNPTWYSP 240


>gi|198284291|ref|YP_002220612.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198248812|gb|ACH84405.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 361

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 41/160 (25%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++V+IPA  +     N +V     V V     +  +  +RI      P W +P++I    
Sbjct: 97  IIVDIPARRIYYFPVNDRVVYTYPVGVFLPGWKEALTDTRIIAKFKMPAWNVPKNIH--- 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                   ++ F  ++ W             PG  N M    +E
Sbjct: 154 ---------------------AWFEKKFHMDIPWYW----------PPGPENPMGELAME 182

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
                  ++H T  P      +R  + GC ++   N+  L
Sbjct: 183 TGLS-GIFIHGTYHPW--GVGMRA-SQGCFQMFPENVAQL 218


>gi|153954544|ref|YP_001395309.1| Phage-related amidase [Clostridium kluyveri DSM 555]
 gi|146347402|gb|EDK33938.1| Predicted Phage-related amidase [Clostridium kluyveri DSM 555]
          Length = 279

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE- 163
           G+ S  V  L+++L + G L       + +D     AV   Q R      G++   T   
Sbjct: 216 GHKSHIVLWLQQKLEMWGYLKKGSYTDMIYDEPTFQAVTELQKRWERPTDGVLRLETWSV 275

Query: 164 AMN 166
            +N
Sbjct: 276 FLN 278


>gi|307138337|ref|ZP_07497693.1| hypothetical protein EcolH7_09430 [Escherichia coli H736]
 gi|331642276|ref|ZP_08343411.1| putative LysM domain protein [Escherichia coli H736]
 gi|331039074|gb|EGI11294.1| putative LysM domain protein [Escherichia coli H736]
          Length = 177

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDM 255
                I Q+ +
Sbjct: 148 TPTAGIRQRSL 158


>gi|239979825|ref|ZP_04702349.1| hypothetical protein SalbJ_10322 [Streptomyces albus J1074]
          Length = 288

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   +  G +S  V+ L+ RL   G    S   +  +      AV  +Q +  L  +G  
Sbjct: 80  PAVLMRPGQTSEQVRELQARLASLGLFGRSP--TGFYGDVTSEAVSAYQRKGALPVTGTT 137

Query: 158 DSSTLEAM 165
           D+ T + +
Sbjct: 138 DAVTWDRL 145


>gi|90418212|ref|ZP_01226124.1| lytic murein transglycosylase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337884|gb|EAS51535.1| lytic murein transglycosylase [Aurantimonas manganoxydans SI85-9A1]
          Length = 395

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P + +     G    + +RL++RL   G    + G+         +AV+  QMR GL 
Sbjct: 325 GAPPVDMGNPQPGLDLEATKRLQQRLTDLGY--DTGGVDGIIGENTRAAVRKEQMRLGLP 382

Query: 153 PSGMVDSSTLEAM 165
             G   +  L A+
Sbjct: 383 ADGWPTADLLRAL 395


>gi|120536902|ref|YP_956960.1| peptidoglycan binding domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120326736|gb|ABM21045.1| Peptidoglycan-binding domain 1 protein [Marinobacter aquaeolei VT8]
          Length = 528

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
               S   V++L+E L           +   F      A+K  Q  HGLD +G ++  TL
Sbjct: 375 KPPKSPKEVKQLQETLKALNY--RPGPVDGIFGKQTRWAIKRLQQEHGLDITGWLNPETL 432

Query: 163 EAMNVP 168
            A+  P
Sbjct: 433 AALENP 438


>gi|257057487|ref|YP_003135319.1| negative regulator of beta-lactamase expression [Saccharomonospora
           viridis DSM 43017]
 gi|256587359|gb|ACU98492.1| negative regulator of beta-lactamase expression [Saccharomonospora
           viridis DSM 43017]
          Length = 311

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 3/52 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           L  G+ S  V   + RL   G   P+ G    FD     AV  F   +GL  
Sbjct: 237 LRPGDRSEDVLLAQRRLRAHGYDVPAHG---VFDQATREAVAAFAASNGLAQ 285


>gi|3128477|gb|AAC31167.1| metalloproteinase [Arabidopsis thaliana]
          Length = 341

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q I+      +    P    +  VS+  ++  L   G L  +K      D   E A+  +
Sbjct: 29  QQIIEARNPSQFTTNP----SPDVSIPEIKRHLQQYGYLPQNKESD---DVSFEQALVRY 81

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q   GL  +G  DS TL  +
Sbjct: 82  QKNLGLPITGKPDSDTLSQI 101


>gi|15895771|ref|NP_349120.1| SpoIID-like domain-containing protein [Clostridium acetobutylicum
           ATCC 824]
 gi|15025528|gb|AAK80460.1|AE007749_7 SpoIID-like domain containing protein; peptidoglycan-binding domain
           [Clostridium acetobutylicum ATCC 824]
 gi|325509921|gb|ADZ21557.1| SpoIID-like domain protein containing protein [Clostridium
           acetobutylicum EA 2018]
          Length = 1042

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 2/80 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL+ G +S  V  L+  LI  G    S   +  +    +S V   Q ++ L  +G VD++
Sbjct: 884 PLNYGMTSGDVTNLQNALIYLGYSISSA--TGYYGTQTKSVVSSIQSQNSLPVTGNVDTA 941

Query: 161 TLEAMNVPVDLRIRQLQVNL 180
           TL  +N  +  +     +N 
Sbjct: 942 TLYVINSMLATKAGVKLLNF 961


>gi|218666907|ref|YP_002426952.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|218519120|gb|ACK79706.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 348

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 41/160 (25%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++V+IPA  +     N +V     V V     +  +  +RI      P W +P++I    
Sbjct: 84  IIVDIPARRIYYFPVNDRVVYTYPVGVFLPGWKEALTDTRIIAKFKMPAWNVPKNIH--- 140

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                   ++ F  ++ W             PG  N M    +E
Sbjct: 141 ---------------------AWFEKKFHMDIPWYW----------PPGPENPMGELAME 169

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
                  ++H T  P      +R  + GC ++   N+  L
Sbjct: 170 TGLS-GIFIHGTYHPW--GVGMRA-SQGCFQMFPENVAQL 205


>gi|15225398|ref|NP_182030.1| matrix metalloproteinase [Arabidopsis thaliana]
 gi|26452204|dbj|BAC43190.1| putative metalloproteinase [Arabidopsis thaliana]
 gi|31711730|gb|AAP68221.1| At2g45040 [Arabidopsis thaliana]
 gi|330255405|gb|AEC10499.1| matrix metalloprotease domain-containing protein [Arabidopsis
           thaliana]
          Length = 342

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q I+      +    P    +  VS+  ++  L   G L  +K      D   E A+  +
Sbjct: 29  QQIIEARNPSQFTTNP----SPDVSIPEIKRHLQQYGYLPQNKESD---DVSFEQALVRY 81

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q   GL  +G  DS TL  +
Sbjct: 82  QKNLGLPITGKPDSDTLSQI 101


>gi|303286976|ref|XP_003062777.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455413|gb|EEH52716.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 370

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 26/60 (43%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +S  V  L+  L   G      G +  F     +AVK +Q  +G+ PSG     + EA
Sbjct: 96  GETSERVAELQRYLAGEGHYKYRDGATGYFGPITVNAVKNWQRFYGVKPSGGWGVESREA 155


>gi|225166759|ref|YP_002650744.1| hypothetical protein pC2C203U28_p026 [Clostridium botulinum]
 gi|253771353|ref|YP_003034239.1| peptidoglycan-binding domain 1 protein [Clostridium botulinum D
           str. 1873]
 gi|225007423|dbj|BAH29519.1| conserved hypothetical protein [Clostridium botulinum]
 gi|253721330|gb|ACT33623.1| peptidoglycan-binding domain 1 protein [Clostridium botulinum D
           str. 1873]
          Length = 207

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  + S+  ++  L I+        +   F       VK  Q R GLD  G+V   T
Sbjct: 3   LKKGMQNNSITYIQYGLRIT--CINPGNVDGIFGENTYIGVKKLQQRFGLDVDGIVGPGT 60

Query: 162 LEAM 165
            E +
Sbjct: 61  WEKL 64


>gi|90418402|ref|ZP_01226314.1| putative efflux transporter, RND family, membrane fusion protein
           subunit [Aurantimonas manganoxydans SI85-9A1]
 gi|90338074|gb|EAS51725.1| putative efflux transporter, RND family, membrane fusion protein
           subunit [Aurantimonas manganoxydans SI85-9A1]
          Length = 517

 Score = 41.0 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V+ L++RL   G    +  +     A   +A++ +Q  +GL+ +G V  +   A+
Sbjct: 455 VRALQQRLETLGYSPGT--VDGVLGASTRAAIRAYQRDNGLEVTGEVTPALAGAL 507


>gi|310825599|ref|YP_003957957.1| peptidoglycan binding-like protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398671|gb|ADO76130.1| Peptidoglycan binding-like protein [Stigmatella aurantiaca DW4/3-1]
          Length = 538

 Score = 41.0 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 17/74 (22%)

Query: 104 LGNSSVSVQ----RLRERLIISGDLDPSKGLSVAFDAYVESAV------------KLFQM 147
           +G    +V     ++++RL   G L      +   D     AV            + FQ 
Sbjct: 145 VGARGANVPADVRQVQDRLHELGFLSDEAYTAEQADPAQTEAVAEAAMPQTIEAIREFQR 204

Query: 148 R-HGLDPSGMVDSS 160
              G+ P G V  +
Sbjct: 205 EVAGITPDGNVGPN 218


>gi|256395922|ref|YP_003117486.1| peptidoglycan-binding protein [Catenulispora acidiphila DSM 44928]
 gi|256362148|gb|ACU75645.1| Peptidoglycan-binding domain 1 protein [Catenulispora acidiphila
           DSM 44928]
          Length = 389

 Score = 41.0 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRH--GLDPS- 154
            L LG+S  +V +L++ L           +  +S  +D+  + AV+ FQ  +     P  
Sbjct: 313 SLKLGSSGAAVTQLQQNLRRWQRSSFGWSTIQVSGNYDSATQDAVQSFQDNNPGTSPPDP 372

Query: 155 -GMVDSSTLEAM 165
            G+   +T +A+
Sbjct: 373 AGVYGPATDQAL 384


>gi|321314927|ref|YP_004207214.1| putative phage N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis BSn5]
 gi|320021201|gb|ADV96187.1| putative phage N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis BSn5]
          Length = 80

 Score = 41.0 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAM 165
            AV+ FQ+ +GL+P+G+    T   +
Sbjct: 50  DAVRRFQLMNGLNPNGIYGPKTKAKL 75


>gi|297194196|ref|ZP_06911594.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722549|gb|EDY66457.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 434

 Score = 41.0 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 24/80 (30%), Gaps = 5/80 (6%)

Query: 91  RGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSV----AFDAYVESAVKLF 145
           + G P  P R     G SS  V +L +RL+  G                D     A +  
Sbjct: 353 QAGTPAFPGRAHFRPGRSSTYVTQLGKRLVERGYGKHYTSGPDPRWREADRRNVQAFQRA 412

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q   G    G     T   +
Sbjct: 413 QGWRGAAADGYPGPETWRRL 432


>gi|84622730|ref|YP_450102.1| hypothetical protein XOO_1073 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84366670|dbj|BAE67828.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 330

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
            PG  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N  
Sbjct: 267 PPGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWD 312


>gi|153810528|ref|ZP_01963196.1| hypothetical protein RUMOBE_00909 [Ruminococcus obeum ATCC 29174]
 gi|149833707|gb|EDM88788.1| hypothetical protein RUMOBE_00909 [Ruminococcus obeum ATCC 29174]
          Length = 442

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQM-RHG-LDPS 154
           + + LG++  SV  L+E LI  G       +  LS   D     A+K +Q  R G L+  
Sbjct: 369 KLVKLGSTGTSVLLLQEILIARGFKGKNGKTLTLSRKADENTIYALKTYQKSRKGVLEAD 428

Query: 155 GMVDSSTLEAM 165
           G+    T + +
Sbjct: 429 GIAGEKTWKDL 439


>gi|120554507|ref|YP_958858.1| peptidoglycan binding domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120324356|gb|ABM18671.1| Peptidoglycan-binding domain 1 protein [Marinobacter aquaeolei VT8]
          Length = 562

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 5/69 (7%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              +  L ERL   G            D      V+ +Q + GL   G+  + T+  MN 
Sbjct: 490 GARMMELAERLSSGGQEAARVKRMEMTDQ-----VRWYQEKRGLTVDGIAGAMTIIQMNN 544

Query: 168 PVDLRIRQL 176
            +   I +L
Sbjct: 545 DLAENIPRL 553


>gi|323484631|ref|ZP_08089993.1| hypothetical protein HMPREF9474_01744 [Clostridium symbiosum
           WAL-14163]
 gi|323694833|ref|ZP_08108988.1| spore cortex-lytic enzyme SleC [Clostridium symbiosum WAL-14673]
 gi|323402014|gb|EGA94350.1| hypothetical protein HMPREF9474_01744 [Clostridium symbiosum
           WAL-14163]
 gi|323501149|gb|EGB17056.1| spore cortex-lytic enzyme SleC [Clostridium symbiosum WAL-14673]
          Length = 427

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLD 152
             P   L +G+S   V++++E+L  I +     P   +   +      +VK+FQ   GL 
Sbjct: 341 SFPGTNLTIGSSGDKVRQMQEQLDTIATVYSSIPRVAIDGIYGPATAESVKVFQSVFGLP 400

Query: 153 PSGMVDSSTLE 163
            +G+VD +T  
Sbjct: 401 QTGVVDFATWY 411


>gi|292669250|ref|ZP_06602676.1| LysM domain protein [Selenomonas noxia ATCC 43541]
 gi|292649091|gb|EFF67063.1| LysM domain protein [Selenomonas noxia ATCC 43541]
          Length = 233

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +V+ ++E LI +G LD              +A++  Q  H L   G+   +T 
Sbjct: 56  KEGMRGGAVRHVQELLIQAGYLDGGADGIAG--PLTRAAIERCQADHMLVVDGICGEATY 113

Query: 163 EAMNVPVD 170
             ++   +
Sbjct: 114 RVLSGGAE 121


>gi|160898818|ref|YP_001564400.1| peptidoglycan-binding domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160364402|gb|ABX36015.1| Peptidoglycan-binding domain 1 protein [Delftia acidovorans SPH-1]
          Length = 586

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
              G + +  + +R+ LI  G L P      A +     A+  FQ   G+  SG+VD +T
Sbjct: 322 YEEGEAGIHQELVRQSLISKGYLPPDAPAFTAGNPQWREAIGRFQADSGMVVSGVVDFNT 381

Query: 162 LE 163
            E
Sbjct: 382 YE 383


>gi|307266055|ref|ZP_07547601.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918924|gb|EFN49152.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 350

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               R L+ G     V+ L+  L  +G    +  +   F     + V  FQ      P G
Sbjct: 33  TFGSRLLYSGTYGTDVEELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRYKNFVPDG 90

Query: 156 MVDSSTLEAM 165
           +V   T  A+
Sbjct: 91  IVGPKTYAAL 100


>gi|291547836|emb|CBL20944.1| Putative peptidoglycan-binding domain-containing protein
           [Ruminococcus sp. SR1/5]
          Length = 424

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G +   VQ+++E+L  I+      PS  +   +     ++VK FQ   GL  S
Sbjct: 340 PGYDLTIGVTGEKVQQIQEQLNAIAKAYPAIPSVTVDGIYGPATAASVKKFQNIFGLPAS 399

Query: 155 GMVDSSTLE 163
           G+VD  T  
Sbjct: 400 GVVDYPTWY 408


>gi|332707297|ref|ZP_08427350.1| peptidoglycan binding domain protein [Lyngbya majuscula 3L]
 gi|332354031|gb|EGJ33518.1| peptidoglycan binding domain protein [Lyngbya majuscula 3L]
          Length = 422

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  ++ +L      D  +     +    E AV LFQ   GL   G+VDS T
Sbjct: 61  LLKGSRGKEVALVQAKLKHLDFYDGLEDG--VYGEDTEKAVALFQESVGLRKLGVVDSVT 118

Query: 162 LEAM 165
            + +
Sbjct: 119 RKEL 122


>gi|311070871|ref|YP_003975794.1| YbfG protein [Bacillus atrophaeus 1942]
 gi|310871388|gb|ADP34863.1| YbfG [Bacillus atrophaeus 1942]
          Length = 725

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEA-MNVPV-------DLRIRQLQVN 179
           G +  F    E+AVK FQ   GL    G+V +  ++A +++         + R+RQ+Q N
Sbjct: 96  GFTGVFFEQTENAVKKFQKAAGLTTQDGVVTALIMKALLDMSAFRLVPGGNSRVRQIQQN 155

Query: 180 LMR 182
           L R
Sbjct: 156 LNR 158


>gi|238059219|ref|ZP_04603928.1| N-acetylmuramoyl-L-alanine amidase family 2 [Micromonospora sp.
           ATCC 39149]
 gi|237881030|gb|EEP69858.1| N-acetylmuramoyl-L-alanine amidase family 2 [Micromonospora sp.
           ATCC 39149]
          Length = 420

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S   V  ++  L   G  D    ++  FD     AV+  Q  H L P G VD+ST  A+
Sbjct: 352 SGAPVSAVQFILEWKGYAD--VAVTGEFDHATRRAVQDVQRLHSLPPDGRVDTSTWCAI 408



 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           SS SV+ ++  L   G + P   ++  FDA   +AV+ +Q R+G+   
Sbjct: 286 SSPSVRVVQYLLTHRGYMVP---VNSTFDAATVAAVQDWQARNGIPVD 330


>gi|229551060|ref|ZP_04439785.1| peptidoglycan binding domain protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|258538230|ref|YP_003172729.1| YkuG protein [Lactobacillus rhamnosus Lc 705]
 gi|229315655|gb|EEN81628.1| peptidoglycan binding domain protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|257149906|emb|CAR88878.1| YkuG protein [Lactobacillus rhamnosus Lc 705]
          Length = 775

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 46/126 (36%), Gaps = 19/126 (15%)

Query: 74  TIAQTEKAIAFYQDILSRG-GWPELP-------IRPLHLGNSSVSVQRLRERLIISGDLD 125
           TI    +A+     I S G G+           +  L  G      Q ++      G ++
Sbjct: 36  TIYALREALQHELGISSIGEGFGTATRTALSGVVDQLKPGYKGNIAQLIQGAFWCKG-IN 94

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPV-------DLRIRQLQ 177
           P   L+  F A  E A K  Q   GL   G V  + + A+ ++         D  +RQLQ
Sbjct: 95  PGTELNQNFSAETEQAFKSLQQDAGLTADGTVTVNLMAALFDMSAFVLVSGGDANVRQLQ 154

Query: 178 --VNLM 181
             +N  
Sbjct: 155 QWLNAE 160


>gi|209518462|ref|ZP_03267284.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. H160]
 gi|209501095|gb|EEA01129.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. H160]
          Length = 362

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            RP+    S+++V +++ +L   G   P              A+K FQ   GL  +G  D
Sbjct: 296 TRPVPPEASAMTVAQMQAKLNALGF--PVGTPDGHMGNRTRRALKYFQKSQGLPQTGEPD 353

Query: 159 SSTLEAM 165
           S+T+ A+
Sbjct: 354 SATVAAL 360


>gi|115375119|ref|ZP_01462387.1| putative peptidoglycan binding domain protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115367865|gb|EAU66832.1| putative peptidoglycan binding domain protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 491

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 17/74 (22%)

Query: 104 LGNSSVSVQ----RLRERLIISGDLDPSKGLSVAFDAYVESAV------------KLFQM 147
           +G    +V     ++++RL   G L      +   D     AV            + FQ 
Sbjct: 98  VGARGANVPADVRQVQDRLHELGFLSDEAYTAEQADPAQTEAVAEAAMPQTIEAIREFQR 157

Query: 148 R-HGLDPSGMVDSS 160
              G+ P G V  +
Sbjct: 158 EVAGITPDGNVGPN 171


>gi|255319277|ref|ZP_05360494.1| secretion activator protein [Acinetobacter radioresistens SK82]
 gi|255303670|gb|EET82870.1| secretion activator protein [Acinetobacter radioresistens SK82]
          Length = 255

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           A+K  Q   G+   G++   T+ A+N  +DL    L +   R+K
Sbjct: 183 AIKELQQVAGVPADGIIGPKTIAAVNA-MDLNDVLLTLTAERLK 225


>gi|255083362|ref|XP_002504667.1| predicted protein [Micromonas sp. RCC299]
 gi|226519935|gb|ACO65925.1| predicted protein [Micromonas sp. RCC299]
          Length = 497

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG-GWPELPIRPLHLGN 106
            +    + +   D     D P+   E     +K    +  I + G  WP      L L +
Sbjct: 335 WSKNVVSLVDNPDNDPGDDAPVWGDEQNRPIDKVSEEFTQIATSGEKWPV-----LRLED 389

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             + V +L   L  +G     + +   +F    E+A+  FQ  +GL  +G+    T +A+
Sbjct: 390 GGMEVHKLHVLLDSAGYYSGEEDMEWWSFGGSTENALGTFQASNGLPDTGLTCLLTWKAL 449


>gi|122879074|ref|YP_199818.6| hypothetical protein XOO1179 [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 330

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
            PG  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N  
Sbjct: 267 PPGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWD 312


>gi|313113431|ref|ZP_07799020.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624158|gb|EFQ07524.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 230

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L  G+    V  L++ L   G    S+ +   F A  E A+K FQ R  L   G+  
Sbjct: 152 TLRRGSRGCYVMILQDALSTLGYQTGSR-IDGIFGARTEEALKGFQRRTSLRVDGVCG 208


>gi|295319659|gb|ADG00037.1| putative peptidoglycan-binding protein [Clostridium botulinum F
           str. 230613]
          Length = 46

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           G    FD      +K FQ    L   G+V   T +A+
Sbjct: 5   GADDVFDNGTVVGIKYFQRDCNLSVDGIVGRETWKAL 41


>gi|297562125|ref|YP_003681099.1| peptidoglycan-binding protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846573|gb|ADH68593.1| Peptidoglycan-binding domain 1 protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 193

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 2/58 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
              G++   V  ++  L      +        +    E AV+  Q   G+   G+   
Sbjct: 124 FRRGDTGPVVTMIQRELNAK--FNAHLATDGVYGPATERAVRAAQEHFGIGVDGVFGP 179



 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 7/70 (10%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WPE       LG+SS+ V    + L+ SG+++P + L++ FD  +   +  +Q   GL  
Sbjct: 50  WPE-----YTLGDSSIDVYA-AKMLLSSGEINPGE-LNLEFDQDLHDTLVTYQEAFGLHN 102

Query: 154 SGMVDSSTLE 163
            G ++  T E
Sbjct: 103 DGDLNPDTWE 112


>gi|228924445|ref|ZP_04087671.1| general secretion pathway protein A [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835210|gb|EEM80625.1| general secretion pathway protein A [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 54

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   +K FQ  H L   G+V  STL  +
Sbjct: 1   MVEKIKQFQKSHHLKTDGVVGFSTLVHL 28


>gi|47523768|ref|NP_999520.1| epoxide hydrolase 1 [Sus scrofa]
 gi|75069447|sp|P79381|HYEP_PIG RecName: Full=Epoxide hydrolase 1; AltName: Full=Epoxide hydratase;
           AltName: Full=Microsomal epoxide hydrolase
 gi|1840391|dbj|BAA19200.1| epoxide hydrolase [Sus scrofa]
          Length = 454

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 20/53 (37%)

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
           GC    + + L  ++L+   TW+     ++          L   + V  +Y +
Sbjct: 310 GCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIMLYWT 362


>gi|254426139|ref|ZP_05039856.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
 gi|196188562|gb|EDX83527.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
          Length = 1128

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 49/145 (33%), Gaps = 26/145 (17%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             SL  KP +    D    E + +I ++R      R     +      SK T  +++K +
Sbjct: 654 AASLRSKPSNPRQADA--KEGWTNIKDNRPKPSNPRQADAKEGWT-SRSKPTNPRSDKGL 710

Query: 83  AFYQDILSRGGWPELPIRPLHLGN---SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
             Y+                  G    S   V++ +  +   G       +   +    +
Sbjct: 711 LTYR-----------------PGAEMISGNRVKQWQRAMRRQGY---DIAVDGIYGPQSQ 750

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEA 164
           S  + FQ + GLD  G+V   T  A
Sbjct: 751 SVARQFQRKKGLDTDGIVGPKTWAA 775



 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 6/67 (8%)

Query: 101 PLHLGN---SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               G    S   V++ +  +   G       +   +    +S  + FQ + GLD  G+V
Sbjct: 592 TYRPGAEMISGNRVKQWQRAMRRQGY---DIAVDGIYGPQSQSVARQFQRKKGLDTDGIV 648

Query: 158 DSSTLEA 164
              T  A
Sbjct: 649 GPKTWAA 655


>gi|186682714|ref|YP_001865910.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102]
 gi|186465166|gb|ACC80967.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102]
          Length = 182

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 60/160 (37%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +   ++ +V     + +G+   +TP+ + ++  +  NP       I +           
Sbjct: 66  QVYVYQDKQVLKSFPIAIGKSGWETPLGNYQVIYMKKNP-------IFKN---------- 108

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY- 322
              K  NI M                            PG  N +    I F      Y 
Sbjct: 109 --FKTGNIIM----------------------------PGANNPLGKRVIVFK----IYK 134

Query: 323 -----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
                 H T +  L        + GC+R+ N   + ++ L
Sbjct: 135 KSHLAFHGTNQDKLIGK---AVSHGCIRMLNKDVIALYEL 171


>gi|284054140|ref|ZP_06384350.1| extracellular solute-binding protein [Arthrospira platensis str.
           Paraca]
          Length = 401

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 6/78 (7%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    +  L+ RL   G    +  +   +      A+  FQ+  GL+ +G+V+  T + 
Sbjct: 70  GDYD--IIELQNRLQQKGYYLGA--IDGIYGEQTREAISNFQLDIGLENTGIVNQETWDY 125

Query: 165 M--NVPVDLRIRQLQVNL 180
           +  N  V  +  Q   ++
Sbjct: 126 LLGNAAVIAQANQSLNSM 143


>gi|255554154|ref|XP_002518117.1| conserved hypothetical protein [Ricinus communis]
 gi|223542713|gb|EEF44250.1| conserved hypothetical protein [Ricinus communis]
          Length = 386

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            L  G+    V+ ++E L+  G     + +   +F +  E AVK +Q   G    G++ +
Sbjct: 169 TLRKGSEGDEVREMQEALLNLGFYSGEEDMEFSSFSSGTERAVKTWQASLGAPEDGIMTA 228

Query: 160 STLEAM 165
             LE +
Sbjct: 229 ELLERL 234


>gi|118595120|ref|ZP_01552467.1| ErfK/YbiS/YcfS/YnhG [Methylophilales bacterium HTCC2181]
 gi|118440898|gb|EAV47525.1| ErfK/YbiS/YcfS/YnhG [Methylophilales bacterium HTCC2181]
          Length = 160

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 33/161 (20%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTV-----IVG--RVDRQTPILHSRINRIMFNPYWVIPR 248
           + +++ +  L   + G++     V      VG  +   +TP+ +  I  ++         
Sbjct: 5   INISVSSQKLSLFQEGELVSSYKVSTALKGVGQEKNTNKTPLGNHIIRAMI--------- 55

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                      R  P Y         +E   KE+    +  +                N 
Sbjct: 56  ----------GRNLPIYAVIKARRYTNEIWTKELDDPSITVDWILSRVIWLSGKDLGRNR 105

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           + +       +   Y+H T E  L        + GC+R+ N
Sbjct: 106 LGNVDTM---QRYIYIHGTNEEHLLGTPS---SHGCIRMSN 140


>gi|296447409|ref|ZP_06889335.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylosinus trichosporium OB3b]
 gi|296255112|gb|EFH02213.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylosinus trichosporium OB3b]
          Length = 249

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-P 153
           P +    L  G     V  L++ L   G   P   +S  +D    + V  FQ        
Sbjct: 170 PIVGGAALEPGAEGGEVSALQQALADYGYKSP---VSGCYDEGAAAVVAAFQRHFRPRLV 226

Query: 154 SGMVDSSTLEAM 165
            G  D STL+ +
Sbjct: 227 DGRADRSTLDTL 238


>gi|225377726|ref|ZP_03754947.1| hypothetical protein ROSEINA2194_03377 [Roseburia inulinivorans DSM
           16841]
 gi|225210403|gb|EEG92757.1| hypothetical protein ROSEINA2194_03377 [Roseburia inulinivorans DSM
           16841]
          Length = 425

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLI-ISGDLD--PSKGLSVAFDAYVESAVKLFQMRHG 150
           WP      L +G +   V++++E+L  IS      P+      +     +AV+ FQ   G
Sbjct: 340 WPR---YNLEVGAAGDKVRQIQEQLARISQAYPAIPTITPDGIYGEATRAAVEKFQSIFG 396

Query: 151 LDPSGMVDSSTLE 163
           L  +G+VD  T  
Sbjct: 397 LPVTGVVDYRTWY 409


>gi|291303383|ref|YP_003514661.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572603|gb|ADD45568.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 381

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           R + +G+    V++L + L   G       +   F A   +AV+ +Q   GL  +G V
Sbjct: 142 RDMKVGDEGSDVKQLEKNLAKLGY--DGFTVDKEFTADTATAVREWQDDLGLKETGTV 197


>gi|188996949|ref|YP_001931200.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932016|gb|ACD66646.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 464

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 61/188 (32%), Gaps = 48/188 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           + L  +      + +NI    L     + +    +   + +G  + Q+PI   +I++   
Sbjct: 268 RILPVKDFKYGMIYINIYEKRLYYPIKINDESYVITYPIGIGADEAQSPIGEFKISQKRK 327

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           +P W  P SI +K+                                       P+     
Sbjct: 328 DPAWYPPESI-RKE--------------------------------------QPDLPPVF 348

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLK 358
            PG  N + +  +   +  +  MH T +       V   + GC+R+   ++  L   +  
Sbjct: 349 PPGPDNPLGTRAMRLGNT-SFLMHGTNKEYGIGMKV---SHGCIRMYNEDVEKLFEVVDI 404

Query: 359 DTPTWSRY 366
            TP  SR 
Sbjct: 405 GTPIVSRE 412


>gi|47228071|emb|CAF97700.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 549

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P    + +  +   + SA+   Q  +GL  +G +D ST++AM  P     D 
Sbjct: 5   LQQYGYLPPGDMRTHSLRSPHSITSAIAAMQRFYGLTVTGAIDDSTIQAMKRPRCGVPDK 64

Query: 172 RIRQLQVNLMRIK 184
              +L+ NL R +
Sbjct: 65  FGAELKSNLRRKR 77


>gi|150377011|ref|YP_001313607.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
 gi|150031558|gb|ABR63674.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 327

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 16/113 (14%)

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI  +         P     + +  +      V+  EV++   +          G  N
Sbjct: 218 PASIGSE-------ASPSPSGRHKVKGVARMPPYVYDPEVNFQQADNNK-PLTLPKGPNN 269

Query: 307 AMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            + +  I+          H TPEP L +     ++ GCVR+ N    +L   +
Sbjct: 270 PVGTVWIDLTKPTYGI--HGTPEPSLIDK---AQSHGCVRLTNWDAEELAEMV 317


>gi|321462023|gb|EFX73050.1| hypothetical protein DAPPUDRAFT_325672 [Daphnia pulex]
          Length = 533

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 118 LIISGDLDPSKGLSVAFD---AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L+P    S         V +A+  FQ   GLDP+G+V+  TL  M  P
Sbjct: 31  LASFGYLEPRLKNSSTASVSANTVRNAISDFQSYAGLDPTGIVNEETLTWMRKP 84


>gi|258653019|ref|YP_003202175.1| peptidoglycan-binding protein [Nakamurella multipartita DSM 44233]
 gi|258556244|gb|ACV79186.1| Peptidoglycan-binding domain 1 protein [Nakamurella multipartita
           DSM 44233]
          Length = 554

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 7/87 (8%)

Query: 86  QDILSRGGWPELPIRP-------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           + ++   G  ++P  P       L +G   V+V+ L+ERL  SG       +   F    
Sbjct: 140 ETVVDGPGATQVPSNPAAGTHAQLQVGAKGVAVKELQERLNNSGVAGAKLLVDGIFGPKT 199

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++ +K FQ    +  +G+ D +T   +
Sbjct: 200 DAGLKTFQGTIPVAATGIADPATWTKL 226


>gi|194014667|ref|ZP_03053284.1| N-acetylmuramoyl-L-alanine amidase XlyA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
 gi|194013693|gb|EDW23258.1| N-acetylmuramoyl-L-alanine amidase XlyA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
          Length = 299

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 9/97 (9%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGN---SSVSVQRLRERLIISGDLD- 125
           IS     Q  + +  Y++        ELP   L + +       V+ +++ L        
Sbjct: 193 ISDPNKIQIGQVLKIYRNDAKS--LYELPNGVLKVTSPLTKGEHVRLVQQALAAVYFYPD 250

Query: 126 ---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
               +KG+   +     +AV  FQ+ +GL   G+   
Sbjct: 251 KAAANKGIDGVYGEKTANAVARFQLVNGLTSDGVYGP 287


>gi|188578233|ref|YP_001915162.1| ErfK/YbiS/YcfS/YnhG [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188522685|gb|ACD60630.1| ErfK/YbiS/YcfS/YnhG [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 271

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
            PG  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N  
Sbjct: 208 PPGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWD 253


>gi|13488433|ref|NP_109440.1| hypothetical protein mll9583 [Mesorhizobium loti MAFF303099]
 gi|14028187|dbj|BAB54779.1| mll9583 [Mesorhizobium loti MAFF303099]
          Length = 376

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 47/158 (29%), Gaps = 44/158 (27%)

Query: 195 YVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            V V+     + A  E+G +       +G  +  +P     +  ++ NP +         
Sbjct: 244 RVEVDKAEGQVRAYAEDGSLLAAFPATIGSEENPSPSGMHTVRAVVSNPSYT-------- 295

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                L     + + NN  ++                           PG    + +  I
Sbjct: 296 -YNPKL----NFKQGNNDKVLTL------------------------PPGPNGPVGTVWI 326

Query: 314 EFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
           +          H TPEP     + +  + GCVR+ N  
Sbjct: 327 DLSEPSFGI--HGTPEP---ARIDKTGSHGCVRLTNWD 359



 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDA-YVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S S+ RL+  L  +G    S G+    D   +  A+  F+M  GL   G +    + A+
Sbjct: 102 SPSIVRLQVLLDRAG---ASPGVIDGLDGGNLRHAIAAFEMMRGLPVDGRIGPQVIAAI 157


>gi|15614028|ref|NP_242331.1| hypothetical protein BH1465 [Bacillus halodurans C-125]
 gi|10174082|dbj|BAB05184.1| BH1465 [Bacillus halodurans C-125]
          Length = 170

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
               +G  +++VNI    L  V+ GK+     +  G+   +TP+
Sbjct: 22  PNPTVGDPFLIVNIATNRLAYVDEGKIQKIVPIATGKPSDKTPV 65


>gi|257791952|ref|YP_003182558.1| ErfK/YbiS/YcfS/YnhG family protein [Eggerthella lenta DSM 2243]
 gi|257475849|gb|ACV56169.1| ErfK/YbiS/YcfS/YnhG family protein [Eggerthella lenta DSM 2243]
          Length = 552

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 3/45 (6%)

Query: 189 QKMGLRYVLVNIPAASLEAVEN-GKVGLRSTVIVGRVD--RQTPI 230
           +  G RYV V++        ++ G +   S V+ G  D    TP 
Sbjct: 416 RDWGKRYVDVDLTEQHARFYDDEGSLAWESDVVTGTPDGEHDTPE 460


>gi|146329639|ref|YP_001209845.1| hypothetical protein DNO_0956 [Dichelobacter nodosus VCS1703A]
 gi|146233109|gb|ABQ14087.1| hypothetical protein DNO_0956 [Dichelobacter nodosus VCS1703A]
          Length = 478

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 16/110 (14%)

Query: 79  EKAIAFYQDILSRGG------WPELPIRPLHLGNSSVSVQRLRERLIISG--DLDPSKGL 130
           E  +  Y D+ + GG      W  +  +    G  S ++     RLI +G   LD   G+
Sbjct: 57  EYGLTLY-DLAAMGGASELQQW-LVKQKVAKEGEYSSALI----RLIQTGLRFLDFDAGV 110

Query: 131 -SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
               ++   +S +K FQ       +G + +  L   N  +  +++Q ++N
Sbjct: 111 IDGVYNQDTQSGIKAFQKSQKQKTTGKITADWLRIFNRRLTAKVQQ-RLN 159


>gi|295445967|gb|ADG21911.1| amidase [Alcaligenes sp. WRB10]
          Length = 254

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 33/122 (27%)

Query: 1   MVGYL--------KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF 52
           M+GYL        K  + LY    Y +    LS             +IN+   ++   + 
Sbjct: 157 MMGYLHFIANIPVKGTRWLYSSKPYALATPPLS-------------VINQWQQALDKGQL 203

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
             F+A +             +     E  +A    +     WP+L  +  L  G  S  V
Sbjct: 204 PTFVAGLAPQH--------PQYAVMHESLLAL---LSDTKPWPQLTGKATLRPGQWSNDV 252

Query: 112 QR 113
             
Sbjct: 253 PA 254


>gi|109392314|ref|YP_655544.1| gp27 [Mycobacterium phage Halo]
 gi|189043114|ref|YP_001936055.1| hypothetical protein BPs1_27 [Mycobacterium phage BPs]
 gi|239590038|ref|YP_002941885.1| gp27 [Mycobacterium phage Angel]
 gi|91980564|gb|ABE67284.1| hypothetical protein Halo27 [Mycobacterium phage Halo]
 gi|171909229|gb|ACB58186.1| hypothetical protein BPs1_27 [Mycobacterium phage BPs]
 gi|238890570|gb|ACR77559.1| gp27 [Mycobacterium phage Angel]
 gi|255927871|gb|ACU41491.1| gp27 [Mycobacterium phage Hope]
          Length = 438

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSST 161
             G     V+ L+ RL           +   F  + E+ V+ +Q  H  L   G+V  +T
Sbjct: 374 RPGQDPRQVRVLQTRLKR---AYSKLDVDGIFGPHTEACVRDYQHLHPPLVADGIVGPAT 430

Query: 162 LEAM 165
             A+
Sbjct: 431 AAAL 434


>gi|209885148|ref|YP_002289005.1| lytic murein transglycosylase [Oligotropha carboxidovorans OM5]
 gi|209873344|gb|ACI93140.1| lytic murein transglycosylase [Oligotropha carboxidovorans OM5]
          Length = 409

 Score = 40.6 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +Q ++ RL  +G    + G           AVK FQ R GL P G      L  +
Sbjct: 351 AEIQEVQTRLTKAGF--DTGGTDGRVGNDTMKAVKDFQTRAGLTPDGYAGLKVLARL 405


>gi|260907624|ref|ZP_05915946.1| putative phage integrase [Brevibacterium linens BL2]
          Length = 401

 Score = 40.6 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 97  LPIRPLHLGN--SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +  R L      +S +V+RL++ L +S     S      +     +AV+  Q  +GL  +
Sbjct: 258 VSNRALKPAVELASGAVERLQDALSVSEY---SGDFFHVYGPDTVAAVERVQRENGLSVT 314

Query: 155 GMVDSSTLEAM 165
           G  D++T EA+
Sbjct: 315 GRADAATREAI 325


>gi|15613529|ref|NP_241832.1| N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall
           hydrolase) [Bacillus halodurans C-125]
 gi|10173581|dbj|BAB04685.1| N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall
           hydrolase) [Bacillus halodurans C-125]
          Length = 338

 Score = 40.6 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 9/131 (6%)

Query: 39  IINESYHS--IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
            I+    +  +  D+F   +AR      +D   + +    +T  A    +   + G   +
Sbjct: 143 FIDNPADAALLKEDQFITKIARGHAEGIADAFGLKR----RTGSASVAKKQKAAVGASKQ 198

Query: 97  LPIRPLHLGNSS-VSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +      L      +V  L+ +L+  G DL   +   VA    + +A+K FQ +  +   
Sbjct: 199 VTTSGYDLIQRYFSNVSVLQRQLMAVGEDLSRYRDDGVAGKETL-TAIKSFQRKERITVD 257

Query: 155 GMVDSSTLEAM 165
           G+    T   +
Sbjct: 258 GIPGPVTQSRL 268



 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 13/35 (37%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              F    E   + +Q +HGL   G V   T   M
Sbjct: 302 DSLFGPQTERGARHYQQKHGLTVDGKVGPQTWGHM 336


>gi|331005107|ref|ZP_08328510.1| General secretion pathway protein A [gamma proteobacterium
           IMCC1989]
 gi|330421076|gb|EGG95339.1| General secretion pathway protein A [gamma proteobacterium
           IMCC1989]
          Length = 613

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           ++  +E  ++LFQ ++GL   G     TL  +N
Sbjct: 557 YNRLLEKRIRLFQKKYGLKEDGKAGMETLLKLN 589


>gi|16077289|ref|NP_388102.1| pepdidoglycan binding protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221308033|ref|ZP_03589880.1| hypothetical protein Bsubs1_01223 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312356|ref|ZP_03594161.1| hypothetical protein BsubsN3_01226 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317289|ref|ZP_03598583.1| hypothetical protein BsubsJ_01228 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321553|ref|ZP_03602847.1| hypothetical protein BsubsS_01249 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81555893|sp|O31447|YBFG_BACSU RecName: Full=Uncharacterized protein ybfG
 gi|2632506|emb|CAB12014.1| putative pepdidoglycan binding protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|3599642|dbj|BAA33117.1| ybfG [Bacillus subtilis]
          Length = 732

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEA-MNVPV-------DLRIRQLQVN 179
           G +  F    E+AVK FQ   GL    G+V +  ++A +++         D RIRQ+Q N
Sbjct: 97  GFTGVFYEKTENAVKEFQKAAGLTTQDGIVTTLIMKALLDMSAFKLVSGGDSRIRQIQQN 156

Query: 180 LMR 182
           L R
Sbjct: 157 LNR 159


>gi|328472890|gb|EGF43738.1| hypothetical protein VP10329_19450 [Vibrio parahaemolyticus 10329]
          Length = 244

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 23/169 (13%)

Query: 4   YLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGI 63
           Y +++++L+  +    L +G+ LV  P            +   +    F    ++    +
Sbjct: 79  YERLSRLLFNIYT---LELGVDLVNNPNLLLTPIYSAQATLIGMATGLFTG--SKYSDYL 133

Query: 64  DSDIP--IISKETIAQTEKA--IAFY-----QDILSRGGWPELPIRPLHLGNSSVSVQRL 114
           D +IP  + ++  I  T++A  IA Y     + +    G+  L    +  G   V V+ L
Sbjct: 134 DQEIPDYVNARRIINGTDRAETIAGYAHDFERALKLAFGF-SLDRTTVRNGARGVDVREL 192

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +  L ++ D          F    E++VK FQ ++GL   G+V  +T +
Sbjct: 193 QLNLGLNAD--------GIFGNGTEASVKAFQNKYGLSNDGIVGKNTWK 233


>gi|94265641|ref|ZP_01289383.1| Peptidoglycan-binding domain 1 [delta proteobacterium MLMS-1]
 gi|93453851|gb|EAT04214.1| Peptidoglycan-binding domain 1 [delta proteobacterium MLMS-1]
          Length = 358

 Score = 40.6 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 6/95 (6%)

Query: 84  FYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
            Y ++ S      P     P     S+  ++  ++ L   G       +   +    E A
Sbjct: 129 HYNNLQSNPALIKPTPDSDPSKP--SAKHIREAQQILTEIGY--DPGPIDGLYGRKTEGA 184

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           VK FQ    L   G++D  TL  + + V+ +  +L
Sbjct: 185 VKAFQGDAKLPQHGLIDQETLTFLRMVVEQKKIKL 219


>gi|206600022|ref|YP_002242096.1| gp39 [Mycobacterium phage Konstantine]
 gi|206287110|gb|ACI12455.1| gp39 [Mycobacterium phage Konstantine]
          Length = 321

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERL--IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           L +G++   V ++++ +  +              F   V++AV  FQ R  +   G V  
Sbjct: 181 LRIGSTGPEVLKMQKGMNAVFKNYKAMPLDEDGIFGPMVQAAVIEFQQRSLISVDGEVGP 240

Query: 160 STLEAM 165
            T   +
Sbjct: 241 QTKAKL 246


>gi|163792344|ref|ZP_02186321.1| hypothetical protein BAL199_15893 [alpha proteobacterium BAL199]
 gi|159182049|gb|EDP66558.1| hypothetical protein BAL199_15893 [alpha proteobacterium BAL199]
          Length = 552

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +P R       S  V R++  L+  G  DP     V       +AV+ +Q   G+   
Sbjct: 439 PPVPKR-------SPLVGRIQSALLERGF-DPGPVDGVQ-GPQTVAAVQAYQRYRGVTAD 489

Query: 155 GMVDSSTLEAMNVPVDLRIRQ 175
           G++D++ L ++      R R+
Sbjct: 490 GVIDAALLRSLKTAPSPRPRR 510


>gi|221235062|ref|YP_002517498.1| polar development protein podJ [Caulobacter crescentus NA1000]
 gi|29429226|sp|Q9ZG88|PODJ_CAUCR RecName: Full=Localization factor podJL; AltName: Full=Polar
           organelle development protein; Contains: RecName:
           Full=Localization factor podJS
 gi|251764811|sp|B8GXA0|PODJ_CAUCN RecName: Full=Localization factor podJL; AltName: Full=Polar
           organelle development protein; Contains: RecName:
           Full=Localization factor podJS
 gi|24110907|tpg|DAA00313.1| TPA_exp: polar organelle development protein [Caulobacter
           vibrioides]
 gi|220964234|gb|ACL95590.1| polar development protein podJ [Caulobacter crescentus NA1000]
          Length = 974

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           L   G     +    +    +  A+  +Q   GL P+G VD+ TL  ++V
Sbjct: 924 LSQLGYYQGPRDGVSS--PALRMAIAAYQRDQGLPPTGSVDAETLNRLSV 971


>gi|325829948|ref|ZP_08163406.1| ErfK/YbiS/YcfS/YnhG [Eggerthella sp. HGA1]
 gi|325488115|gb|EGC90552.1| ErfK/YbiS/YcfS/YnhG [Eggerthella sp. HGA1]
          Length = 552

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 3/45 (6%)

Query: 189 QKMGLRYVLVNIPAASLEAVEN-GKVGLRSTVIVGRVD--RQTPI 230
           +  G RYV V++        ++ G +   S V+ G  D    TP 
Sbjct: 416 RDWGKRYVDVDLTEQHARFYDDEGSLAWESDVVTGTPDGEHDTPE 460


>gi|307105888|gb|EFN54135.1| hypothetical protein CHLNCDRAFT_58231 [Chlorella variabilis]
          Length = 651

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 24/57 (42%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           R L  G+    V +L+  L   G      GLS  F      A++ +Q   GL  +G+
Sbjct: 59  RVLQQGSFGDDVMQLQAYLAEQGYFSSDDGLSGYFGDVTGQALQAWQRDQGLRVTGV 115


>gi|297158971|gb|ADI08683.1| hypothetical protein SBI_05563 [Streptomyces bingchenggensis BCW-1]
          Length = 395

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           R L  G     V++L + L   G       +   + A    AV+ +Q   GL  +G V
Sbjct: 153 RALKQGAEGADVRQLEKNLSALGY--TGFTVDDEYTAGTADAVREWQEDLGLAETGAV 208


>gi|167759667|ref|ZP_02431794.1| hypothetical protein CLOSCI_02026 [Clostridium scindens ATCC 35704]
 gi|167662698|gb|EDS06828.1| hypothetical protein CLOSCI_02026 [Clostridium scindens ATCC 35704]
          Length = 421

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L +I+G     P       +     ++V+ FQ   GL  +
Sbjct: 337 PGYTLEIGSSGSKVRQMQEQLNVIAGSYPALPKINADGIYGPATAASVEKFQSIFGLPQT 396

Query: 155 GMVDSSTLE 163
           G VD  T  
Sbjct: 397 GTVDYRTWY 405


>gi|27381722|ref|NP_773251.1| amidase [Bradyrhizobium japonicum USDA 110]
 gi|27354891|dbj|BAC51876.1| amidase [Bradyrhizobium japonicum USDA 110]
          Length = 286

 Score = 40.6 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 10/80 (12%)

Query: 92  GGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W    P +    L LG  S  V  L++ L   G       L+  +DA     V  FQ 
Sbjct: 195 GHWVTPTPVVRGESLMLGTISDEVLSLQQALARYGY---GVPLTGKYDAATMEVVTAFQ- 250

Query: 148 RHGLDP--SGMVDSSTLEAM 165
           RH       G+ D STL  +
Sbjct: 251 RHFRPARLDGVADHSTLSTL 270


>gi|291482585|dbj|BAI83660.1| hypothetical protein BSNT_00388 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 732

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEA-MNVPV-------DLRIRQLQVN 179
           G +  F    E+AVK FQ   GL    G+V +  ++A +++         D RIRQ+Q N
Sbjct: 97  GFTGVFYEKTENAVKEFQKAAGLTTQDGIVTTLIMKALLDMSAFKLVSGGDSRIRQIQQN 156

Query: 180 LMR 182
           L R
Sbjct: 157 LNR 159


>gi|307329028|ref|ZP_07608196.1| transcriptional regulator, XRE family [Streptomyces violaceusniger
           Tu 4113]
 gi|306885390|gb|EFN16408.1| transcriptional regulator, XRE family [Streptomyces violaceusniger
           Tu 4113]
          Length = 387

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +   V  L+  L  +G       +  AF    +  V +FQ+R GL  +G VD  T  A
Sbjct: 211 GQADACVHELQSLLARAG---GELDIDGAFGPATQMRVVVFQLRSGLTANGSVDERTKRA 267

Query: 165 M 165
           +
Sbjct: 268 L 268


>gi|194219304|ref|XP_001498812.2| PREDICTED: similar to matrix metalloproteinase 25 preproprotein
           [Equus caballus]
          Length = 599

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P         +   +  A+K+ Q   GL  +G++D  T+ AM  P       
Sbjct: 73  LTRYGYLPPPNPAQAQLQSPAKLRDAIKVMQRFAGLRETGVLDPETMAAMRKPRCSLPDV 132

Query: 176 LQVN-LMRIKK 185
           L V  L+R ++
Sbjct: 133 LGVAGLVRRRR 143


>gi|328770924|gb|EGF80965.1| hypothetical protein BATDEDRAFT_88038 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1001

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           R RL   G   P KG+ ++    +   VK FQ   GL+ + ++D  T   M+     R
Sbjct: 299 RSRLTALGY-PPPKGVHLSDPNSLRKQVKHFQRTVGLEVTMVLDKRTRTKMDSNTTGR 355


>gi|228984111|ref|ZP_04144297.1| peptidoglycan binding domain protein [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228775639|gb|EEM24019.1| peptidoglycan binding domain protein [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 739

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 12/110 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+S   V   +  L  +G    S   S  ++A VES VK FQ    L   G+ + ST
Sbjct: 221 LKVGSSGRFVTLFQYALYFNG--HDSGSFSTTYNANVESTVKKFQGFTLLPVDGVANKST 278

Query: 162 -LEAM--NVPVDLRIRQL----QVNLMRIKKLLEQKMGL--RYVLVNIPA 202
            L A+      D + +      +V L R K L         RY LVN+P 
Sbjct: 279 WLSALVSTGDPDRKGKACDCITEVTLERGKALKTAGYETVGRY-LVNVPG 327


>gi|153930828|ref|YP_001385112.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935450|ref|YP_001388581.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
 gi|152926872|gb|ABS32372.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|152931364|gb|ABS36863.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
          Length = 236

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 24/63 (38%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             + G    +V+ ++ +L   G      G+   F      AVK FQ    L   G++   
Sbjct: 169 KYNPGRFDANVKLIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDGIIGVD 228

Query: 161 TLE 163
           T +
Sbjct: 229 TWK 231


>gi|166366985|ref|YP_001659258.1| ErfK/YbiS/YcfS/YnhG family protein [Microcystis aeruginosa
           NIES-843]
 gi|166089358|dbj|BAG04066.1| ErfK/YbiS/YcfS/YnhG family protein [Microcystis aeruginosa
           NIES-843]
          Length = 166

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 48/153 (31%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +L+N+    +   +  K+     V +GR   +TP    R+  ++  P W  P +     +
Sbjct: 41  LLLNLKKRRVFVYQGQKIIASYPVAIGRRGWETPTGQFRVIHMVREPVWEHPFT---GQL 97

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
           +   + +P   +                    W   +  NF                   
Sbjct: 98  VPSGKNNPLGARWIGF----------------WT--DGANF------------------- 120

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                   H TP+  L     R  + GCVR+R+
Sbjct: 121 -----IGFHGTPQENLIG---RAVSHGCVRMRD 145


>gi|90419110|ref|ZP_01227021.1| peptidoglycan-binding protein [Aurantimonas manganoxydans SI85-9A1]
 gi|90337190|gb|EAS50895.1| peptidoglycan-binding protein [Aurantimonas manganoxydans SI85-9A1]
          Length = 249

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 22/110 (20%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS--------S 160
             V+ ++  L  +G  +             ++A++ FQ RHGL   G             
Sbjct: 80  PLVREVQTALAEAGIYEAPVDGRPG--PATDTAIRTFQSRHGLTTDGAATPLLLSQIRQV 137

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           T +A N     R   +     R++ + +          N+P  S +A ++
Sbjct: 138 TAQAPN--PSPRPNAIASIEERMRGIPQ----------NVPDNSTDAPDD 175


>gi|158423847|ref|YP_001525139.1| lytic murein transglycosylase [Azorhizobium caulinodans ORS 571]
 gi|158330736|dbj|BAF88221.1| lytic murein transglycosylase [Azorhizobium caulinodans ORS 571]
          Length = 421

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 3/58 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVDSSTLEAM 165
             +Q +++RL   G    + G           AVK FQ R GL P  G      L A+
Sbjct: 362 AELQEIQQRLTRLGF--DTGGTDGRVGNDTMRAVKAFQQRAGLTPADGYPGLQVLTAL 417


>gi|302381169|ref|YP_003816992.1| peptidoglycan-binding protein [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191797|gb|ADK99368.1| Peptidoglycan-binding domain 1 protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 269

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            V+ L +RL+++   DP            E+A+K +Q    L P  ++   T +A+
Sbjct: 2   DVRAL-QRLLLAQGFDPGPIDGQI-GKKTEAALKAWQAARRLLPDAVIGPRTRDAL 55


>gi|160915933|ref|ZP_02078141.1| hypothetical protein EUBDOL_01956 [Eubacterium dolichum DSM 3991]
 gi|158432409|gb|EDP10698.1| hypothetical protein EUBDOL_01956 [Eubacterium dolichum DSM 3991]
          Length = 232

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+  V V  L++ L   G    +  L  AF     +A+  FQ  + L   G+   +
Sbjct: 154 TLRIGSRGVYVLVLQDALNALGY--NTYTLDGAFGNNTRNALISFQRNNNLRADGIAGCN 211

Query: 161 TLEAM 165
           T   +
Sbjct: 212 TWTRL 216


>gi|149756826|ref|XP_001493989.1| PREDICTED: matrix metallopeptidase 17 (membrane-inserted) [Equus
           caballus]
          Length = 579

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 31  LSRFGYLPPADPTTGQLQTQEELSKAIAAMQRFGGLEATGILDEATLALMKTPRCSLPDL 90

Query: 176 LQVNLMRIKKLLEQK 190
             V L R ++     
Sbjct: 91  PAVILSRRRRQAPAP 105


>gi|186684696|ref|YP_001867892.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186467148|gb|ACC82949.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 234

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 24/131 (18%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP 95
           +D+ +N    ++  D+F    + +       I  ++   +                    
Sbjct: 125 IDDGLNLHNPNLWKDKFPIIQSELTGLTQPGIRAVNSPRLLFL----------------- 167

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
                PL  G+    ++ ++E+LI  G      G    F     +AV  FQ +  LDP  
Sbjct: 168 ---TTPLMKGD---DIKVVQEKLIGKGFDLGITGADGFFGQATANAVIKFQDQEDLDPVD 221

Query: 155 GMVDSSTLEAM 165
           G+V   T +A+
Sbjct: 222 GIVGDKTKKAL 232


>gi|330822714|ref|YP_004386017.1| peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans K601]
 gi|329308086|gb|AEB82501.1| Peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans K601]
          Length = 346

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ERL   G    +   S         A++ FQ + GL  +G +D++T  A+
Sbjct: 297 ERLNALGYNVGTPDGSAG--PKTARALREFQQQQGLPVTGRLDAATAGAL 344


>gi|319760794|ref|YP_004124731.1| peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans BC]
 gi|317115355|gb|ADU97843.1| Peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans BC]
          Length = 346

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ERL   G    +   S         A++ FQ + GL  +G +D++T  A+
Sbjct: 297 ERLNALGYNVGTPDGSAG--PKTARALREFQQQQGLPVTGRLDAATAGAL 344


>gi|228968274|ref|ZP_04129272.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791447|gb|EEM39051.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 481

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAM 165
            T EA+
Sbjct: 463 KTAEAI 468


>gi|325292881|ref|YP_004278745.1| Lysozyme [Agrobacterium sp. H13-3]
 gi|325060734|gb|ADY64425.1| Lysozyme [Agrobacterium sp. H13-3]
          Length = 307

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEAM 165
              V+  +E L  +G L+P         A  ++AV  +Q  H  L   G++  +T+  +
Sbjct: 182 DPVVKEAQELLTTAG-LNPGAIDGWM-GAKTKAAVIAYQKAHPHLIADGIIGPATIAQL 238


>gi|83645387|ref|YP_433822.1| membrane-bound lytic murein transglycosylase B [Hahella chejuensis
           KCTC 2396]
 gi|83633430|gb|ABC29397.1| Membrane-bound lytic murein transglycosylase B [Hahella chejuensis
           KCTC 2396]
          Length = 404

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           PELP  PL       +V  L+++L   G    +             A++ FQ + G+   
Sbjct: 334 PELPRLPL------TAVADLQQKLTDKGF--DAGKSDGIMGPATRDAIRAFQEKQGMIAD 385

Query: 155 GMVDSSTLEAMNVPVDL 171
           G  +   L+A+++ +  
Sbjct: 386 GYPNPEVLQALDIKIQS 402


>gi|21232639|ref|NP_638556.1| hypothetical protein XCC3210 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767252|ref|YP_242014.1| hypothetical protein XC_0920 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990367|ref|YP_001902377.1| conserved exported protein [Xanthomonas campestris pv. campestris
           str. B100]
 gi|21114444|gb|AAM42480.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572584|gb|AAY47994.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732127|emb|CAP50319.1| conserved exported protein [Xanthomonas campestris pv. campestris]
          Length = 324

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
            PG  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N  
Sbjct: 261 PPGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWD 306


>gi|323490202|ref|ZP_08095420.1| carboxy-terminal processing protease [Planococcus donghaensis
           MPA1U2]
 gi|323396131|gb|EGA88959.1| carboxy-terminal processing protease [Planococcus donghaensis
           MPA1U2]
          Length = 507

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS-S 160
           L  G  S  V+   + L   G       +   F+  +  AVK FQ    L+ +G++   S
Sbjct: 405 LKDGTISEQVKTAEQMLEALGY--DVGEVDGVFEEQMTEAVKAFQEEKELEATGVLTEDS 462

Query: 161 TLEAM 165
           T   M
Sbjct: 463 TFAVM 467


>gi|284054148|ref|ZP_06384358.1| hypothetical protein AplaP_22106 [Arthrospira platensis str.
           Paraca]
 gi|291567772|dbj|BAI90044.1| peptidoglycan-binding domain 1 protein [Arthrospira platensis
           NIES-39]
          Length = 253

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            LR  L   G   P    S   DA  +  ++ FQ    L   G+V   T   M
Sbjct: 11  ELRFVLYGLGYGVPVNNDSPT-DAIAQQGIRAFQHDRNLVVDGIVGDKTQAEM 62



 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 24/57 (42%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             V  L   L I    +P    +  +     +AVK FQ R+ L  +G+ D+   + +
Sbjct: 64  AIVSSLHNHLNIVVRPNPPLPGNQFYGPKTTAAVKDFQKRYDLPVTGVADTYVRDKL 120


>gi|212638914|ref|YP_002315434.1| germination-specific spore cortex-lytic enzyme [Anoxybacillus
           flavithermus WK1]
 gi|212560394|gb|ACJ33449.1| Germination-specific spore cortex-lytic enzyme [Anoxybacillus
           flavithermus WK1]
          Length = 305

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL   G       +   F      A++ FQ +  L   G
Sbjct: 46  AFSKQVIQRGAVGDDVIELQARLQYLGFYRG--KIDGVFSWRTYWALRNFQYKFKLPVDG 103

Query: 156 MVDSSTLEAM 165
           +   +T + +
Sbjct: 104 LAGEATKQKL 113


>gi|332711167|ref|ZP_08431100.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332349981|gb|EGJ29588.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 126

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 11/73 (15%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG---------LD 152
           L  G +  +V+ L++ L     +D    +   F +  E AV+ FQ  +          L 
Sbjct: 33  LKKGTAGEAVRFLQQLLNC--YMDYYLVIDGQFGSQTEQAVRDFQSDYNYQGKSNPDYLI 90

Query: 153 PSGMVDSSTLEAM 165
             G+V   T  A+
Sbjct: 91  VDGIVGKETYRAI 103


>gi|327277063|ref|XP_003223285.1| PREDICTED: matrix metalloproteinase-19-like [Anolis carolinensis]
          Length = 475

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 7/69 (10%)

Query: 107 SSVSVQRLRER-----LIISGDL-DPSKGLSVAF-DAYVESAVKLFQMRHGLDPSGMVDS 159
              +V RL E+     L+  G L  P +  S  F +  +E A++ FQ+  GL  +G VD 
Sbjct: 20  KGAAVTRLEEKEALDYLLQFGYLQKPLEQFSNNFTEEEIEEALRSFQLASGLPVTGRVDV 79

Query: 160 STLEAMNVP 168
           +TL  M  P
Sbjct: 80  ATLSQMRQP 88


>gi|260905995|ref|ZP_05914317.1| TrwC relaxase [Brevibacterium linens BL2]
          Length = 1152

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 57/171 (33%), Gaps = 38/171 (22%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAF--YQDILSRGGWPELPIRPL----------H 103
            A +   +   +    ++ +A+  + +A   Y  +  RG    +P   +           
Sbjct: 108 AAALHPEVSDALDAAQQDAVAEIRRWLAQHAYTRVGPRGQQEIIPAESVQTVAVVHRTSR 167

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV----ESAVKLF---------QM--- 147
            G+    V          G   P+ G   A D  V    + A++           Q+   
Sbjct: 168 AGDPHRHVH------FQIGTRVPAAGKWRALDTAVLFKQQGAIRALGAAVIAANPQLAAT 221

Query: 148 --RHGLDPSGMVDSST-LEAMNVPVDLRIRQLQVNLMRIK-KLLEQKMGLR 194
             RHGL    +    T LEA N  +  R  Q++ NL R++ +      G  
Sbjct: 222 LDRHGLTLDSVTGEVTELEAFNPVMSKRAHQVERNLKRLEAEWEAAHPGEE 272


>gi|23099261|ref|NP_692727.1| sporulation specific N-acetylmuramoyl-L-alanine amidase
           [Oceanobacillus iheyensis HTE831]
 gi|25453277|sp|P59105|SLEB_OCEIH RecName: Full=Spore cortex-lytic enzyme; Short=SCLE; Flags:
           Precursor
 gi|22777490|dbj|BAC13762.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Oceanobacillus iheyensis HTE831]
          Length = 276

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G     V  L+ RL   G  +    +   F      A++ FQ   G++  G+   +T
Sbjct: 38  IQQGAVGEDVIELQARLQYLGFYNG--KIDGVFGWGTYWALRNFQYEFGMEIDGLAGQTT 95

Query: 162 LEAM 165
            + +
Sbjct: 96  KDKL 99


>gi|310825690|ref|YP_003958047.1| YkuG [Eubacterium limosum KIST612]
 gi|308737424|gb|ADO35084.1| YkuG [Eubacterium limosum KIST612]
          Length = 712

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V  L+  L ++G    S   +  FD  VE+AV  FQ    L+  G V  ST  A+ V 
Sbjct: 218 ALVYLLQYMLYVNGFNPGS--FNGIFDTGVENAVINFQSLMALEADGWVGLSTWAALLVS 275


>gi|15895879|ref|NP_349228.1| cell wall hydrolase [Clostridium acetobutylicum ATCC 824]
 gi|15025646|gb|AAK80568.1|AE007759_6 Cell wall hydrolase (autolysin), family 25 of glycosyl hydrolases;
           peptodoglycan-binding domain [Clostridium acetobutylicum
           ATCC 824]
 gi|325510031|gb|ADZ21667.1| Cell wall hydrolase (autolysin), family 25 of glycosyl hydrolase
           [Clostridium acetobutylicum EA 2018]
          Length = 325

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L   +    E+ VK++Q  HGL+  G+V + T   +
Sbjct: 284 KLDGVYGPQTEANVKVWQSNHGLNADGIVGNDTWNKL 320



 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           S +V+ ++++L     L     +     A   +A+K FQ   GL   G+    T+ A
Sbjct: 199 SDTVKIIQQQLNTL--LKKGLIVDGISGASTTAAIKEFQGAMGLAQDGIWGPKTVAA 253


>gi|297481953|ref|XP_002692352.1| PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos
           taurus]
 gi|296481308|gb|DAA23423.1| matrix metallopeptidase 24 (membrane-inserted) [Bos taurus]
          Length = 596

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           RL   L   G L P    S A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 31  RLANWLKSYGYLLPYDSRSSALHSGKALQSAVATMQQFYGIPVTGVLDQTTIEWMKKP 88


>gi|209526749|ref|ZP_03275271.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209492793|gb|EDZ93126.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 253

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 1/53 (1%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            LR  L   G   P    S   DA  +  ++ FQ    L   G+V   T   M
Sbjct: 11  ELRFVLYGLGYGVPVNNDSPT-DAIAQQGIRAFQHDRNLVVDGIVGDKTQAEM 62



 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 24/57 (42%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             V  L   L I    +P    +  +     +AVK FQ R+ L  +G+ D+   + +
Sbjct: 64  AIVSSLHNHLNIVVRPNPPLPGNQFYGPKTTAAVKDFQKRYDLPVTGVADTYVRDKL 120


>gi|92117827|ref|YP_577556.1| lytic murein transglycosylase [Nitrobacter hamburgensis X14]
 gi|91800721|gb|ABE63096.1| Lytic murein transglycosylase [Nitrobacter hamburgensis X14]
          Length = 407

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             VQ ++ RL  +G    + G           AVK FQ R GL   G      L  +
Sbjct: 349 AEVQEVQTRLTSAGF--DTGGTDGRVGNDTMKAVKDFQTRVGLPADGYAGLEVLARL 403


>gi|49474987|ref|YP_033028.1| peptidoglycan-binding protein [Bartonella henselae str. Houston-1]
 gi|49237792|emb|CAF26986.1| Peptidoglycan-binding protein [Bartonella henselae str. Houston-1]
          Length = 418

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 9/92 (9%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            +A     IA +  ++    W   P  PL         + L+ RL   G       +   
Sbjct: 333 AVALLANRIAGHSGLVQ--DWQR-PFPPLTFYER----KELQSRLAALGYYKGE--MDGI 383

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                  A+K FQ+RHGL  +G      L  +
Sbjct: 384 IGTASRKALKAFQLRHGLTANGYPTPEVLSLL 415


>gi|325661782|ref|ZP_08150405.1| hypothetical protein HMPREF0490_01140 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472035|gb|EGC75250.1| hypothetical protein HMPREF0490_01140 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 101

 Score = 40.2 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++++E L +I+G     P   +   +     ++VK FQ   GL  +
Sbjct: 17  PGYVLENGSSGNKVRQMQEELNVIAGAYPAIPKITVDGIYGPATAASVKKFQSVFGLPAT 76

Query: 155 GMVDSSTLE 163
           G VD  T  
Sbjct: 77  GTVDYRTWY 85


>gi|311270531|ref|XP_001925199.2| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-17 [Sus
           scrofa]
          Length = 592

 Score = 40.2 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 21/114 (18%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP------- 168
           L   G L P    +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 51  LSRFGYLPPPDPATGQLQTQEELAKAIAAMQRFGGLEATGVLDEATLALMKTPRCSLPDL 110

Query: 169 ---VDLRIRQLQV--------NL-MRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
                 R R+  +        NL  R++         R  +  +   +L+   +
Sbjct: 111 PASASARRRRQALAPTKWNKRNLSWRVRTFPRDSPLGRDTVRALMHYALKVWSD 164


>gi|294812816|ref|ZP_06771459.1| Membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|294325415|gb|EFG07058.1| Membrane protein [Streptomyces clavuligerus ATCC 27064]
          Length = 542

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 21/69 (30%), Gaps = 6/69 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGD-----LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              G  S SV RL ERL   G        P      A D     A +  Q   G +  G 
Sbjct: 411 FRPGAVSPSVTRLGERLRQLGYGRHYTSGPGPDWGEA-DRRNVEAFQRAQGWSGTEADGY 469

Query: 157 VDSSTLEAM 165
               T   +
Sbjct: 470 PGPHTWRRL 478


>gi|288942661|ref|YP_003444901.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
 gi|288898033|gb|ADC63869.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
          Length = 321

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 46/161 (28%), Gaps = 43/161 (26%)

Query: 189 QKMGLRYVLVNIPAASLEAV--ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             +  + ++VN     L      +        + VG+    TP+ +  +     +P W  
Sbjct: 101 PNVPHQGIVVNRAEKRLYYYPPNSPNEVRIYAITVGKDAMATPLGNFDVIEKRKDPTWTP 160

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                       +R +              KG  +                    PG  N
Sbjct: 161 ---------GPQVRANHA-----------AKGHILPPTV---------------PPGPDN 185

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
            +    +   + +  Y +H T +P      V   + GC+R+
Sbjct: 186 PLGRFAMRLSNPD--YLIHGTNQPWGMGLEV---SGGCIRM 221


>gi|237735561|ref|ZP_04566042.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229381306|gb|EEO31397.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 44

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           F    + A+ +FQ   GL   G+V S+T + +
Sbjct: 7   FGKKTKEAIIVFQRNRGLVQDGVVGSNTWDWL 38


>gi|239941793|ref|ZP_04693730.1| peptidoglycan binding domain-containing protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239988253|ref|ZP_04708917.1| peptidoglycan binding domain-containing protein [Streptomyces
           roseosporus NRRL 11379]
          Length = 430

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 10/140 (7%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
           P   S++  P+   VL + +        + R D  ++   +G  S    +  +   +T +
Sbjct: 59  PPAPSVLTAPVQRKVLSDTVITRGKVAASQRLD--VSGEGVGEKSSGRSVVTKAPVRTGQ 116

Query: 81  AIAFYQDILSRGGWP------ELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            +   Q +L   G P      E+P  R L  G++   V +L++ L   G        +  
Sbjct: 117 PLRMGQLLLEISGRPVFVLRGEVPAYRDLGPGSTGQDVSQLQQALAGLGY-GSGNDRAGT 175

Query: 134 FDAYVESAVKLFQMRHGLDP 153
           F    E+AV  F   HG  P
Sbjct: 176 FGPGTEAAVTRFYRAHGHAP 195


>gi|238923688|ref|YP_002937204.1| hypothetical protein EUBREC_1310 [Eubacterium rectale ATCC 33656]
 gi|238875363|gb|ACR75070.1| Hypothetical protein EUBREC_1310 [Eubacterium rectale ATCC 33656]
          Length = 128

 Score = 40.2 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHG 150
           WP   I    +G+S  +V +++++L       P+         +    ++AV+ FQ   G
Sbjct: 43  WPGYNIG---IGSSGQNVYQIQKQLARIAKAYPAIPSIVPDGIYGPKTKAAVEKFQAVFG 99

Query: 151 LDPSGMVDSSTLEAM-NVPVD-LRIRQLQ 177
           L  SG+VD +T   + N+ V   RI +L 
Sbjct: 100 LPVSGVVDYNTWYEISNIYVAVTRIAELA 128


>gi|213612519|ref|ZP_03370345.1| hypothetical protein SentesTyp_08467 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 166

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++N+    L   + GK       + +G++  D  TP + + I+   
Sbjct: 92  LQTLLP-DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKR 150

Query: 240 FNPYWVIPRSI 250
            NP W    +I
Sbjct: 151 ANPTWTPTTNI 161


>gi|302385683|ref|YP_003821505.1| Peptidoglycan-binding domain 1 protein [Clostridium saccharolyticum
           WM1]
 gi|302196311|gb|ADL03882.1| Peptidoglycan-binding domain 1 protein [Clostridium saccharolyticum
           WM1]
          Length = 421

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHG 150
           WP      L +G S   V++++E+L  I +     P       F      AV+ FQ   G
Sbjct: 336 WPGF---NLTVGASGDKVRQVQEQLDTIATVYTAIPRIRADGIFGPATAEAVRQFQSIFG 392

Query: 151 LDPSGMVDSSTLE 163
           L  +G++D +T  
Sbjct: 393 LPVTGVIDFATWY 405


>gi|126335321|ref|XP_001371136.1| PREDICTED: similar to Purinergic receptor P2Y, G-protein coupled, 5
           [Monodelphis domestica]
          Length = 569

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDP 153
            +P R L    S+  V    + L   G L P         +   +  A+K+ Q   GL  
Sbjct: 22  PVPARALEP--SAQDVSLSVDWLTRYGYLPPPHPAQAQLQSPEQLRDAIKIMQRFAGLKE 79

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVN-LMRIKKL 186
           +G++D +TL  M  P       L V  L+R ++ 
Sbjct: 80  TGLMDEATLSTMKKPRCSLPDVLGVAGLVRRRRY 113


>gi|118580186|ref|YP_901436.1| peptidoglycan binding domain-containing protein [Pelobacter
           propionicus DSM 2379]
 gi|118502896|gb|ABK99378.1| Peptidoglycan-binding domain 1 protein [Pelobacter propionicus DSM
           2379]
          Length = 564

 Score = 40.2 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     +  L+  L  +G    +  +   +     SAV+ FQ   G+  +      T
Sbjct: 488 LVPGERRKELHTLQRMLKQAGCYRQA--IDGVYSKATISAVRRFQRSQGIPTNDSGGELT 545

Query: 162 LEAM 165
           L  +
Sbjct: 546 LALL 549


>gi|258511676|ref|YP_003185110.1| spore cortex-lytic enzyme [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478402|gb|ACV58721.1| spore cortex-lytic enzyme [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 267

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                R L  G++   V  L+ RL + G       +   F      AV+ FQ   GL  +
Sbjct: 31  QAFTARNLIYGSTGYDVDELQGRLHLLGYYWG--RIDGIFGWKTYWAVRTFQYNFGLPVT 88

Query: 155 GMVDSST 161
           G VD  T
Sbjct: 89  GEVDMRT 95


>gi|296444538|ref|ZP_06886502.1| lytic murein transglycosylase [Methylosinus trichosporium OB3b]
 gi|296257806|gb|EFH04869.1| lytic murein transglycosylase [Methylosinus trichosporium OB3b]
          Length = 392

 Score = 40.2 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 7/75 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +G WP         G S    + ++  L   G         +        A+  FQ R G
Sbjct: 322 QGAWPTDD-----PGLSRAERREVQALLSRHGYEVGEPDGVIG--TRTMQAIADFQGRAG 374

Query: 151 LDPSGMVDSSTLEAM 165
           +   G     TL A+
Sbjct: 375 MRADGRAGRKTLNAL 389


>gi|229823247|ref|ZP_04449316.1| hypothetical protein GCWU000282_00545 [Catonella morbi ATCC 51271]
 gi|229787413|gb|EEP23527.1| hypothetical protein GCWU000282_00545 [Catonella morbi ATCC 51271]
          Length = 459

 Score = 40.2 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +G  YV V+I   ++   ++ K  L + V+ G+   +T
Sbjct: 329 DDIGPTYVEVDIANQTMFLYKDHKKILEAPVVTGQPAAET 368


>gi|170756455|ref|YP_001780389.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
           Okra]
 gi|169121667|gb|ACA45503.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
           Okra]
          Length = 234

 Score = 40.2 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 25/63 (39%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             +  +   +V+ ++ +L   G      G++  F      A+K FQ    L   G++  +
Sbjct: 167 KYNPNSFDANVKAIQNKLQNIGYSVGKSGVNGYFGDGTLLAIKCFQRDCNLMIDGVIGVN 226

Query: 161 TLE 163
           T  
Sbjct: 227 TWN 229


>gi|153004608|ref|YP_001378933.1| peptidoglycan binding domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152028181|gb|ABS25949.1| Peptidoglycan-binding domain 1 protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 146

 Score = 40.2 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 9/80 (11%)

Query: 95  PELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P +P  P   L  G    +V+ L+  L   G L   +   +  D     A++ FQ    L
Sbjct: 62  PRIPASPEALLAPG----AVKDLQRALTDRGLLGTHRAGEL--DDATSRAIRRFQESEQL 115

Query: 152 DPSGMVDSSTLEAMNVPVDL 171
             +G  D  TL+ + +  D 
Sbjct: 116 AATGFPDRETLQRLGLDPDR 135


>gi|291525690|emb|CBK91277.1| Putative peptidoglycan-binding domain-containing protein
           [Eubacterium rectale DSM 17629]
          Length = 420

 Score = 40.2 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHG 150
           WP   I    +G+S  +V +++++L       P+         +    ++AV+ FQ   G
Sbjct: 335 WPGYNIG---IGSSGQNVYQIQKQLARIAKAYPAIPSIVPDGIYGPKTKAAVEKFQAVFG 391

Query: 151 LDPSGMVDSSTLEAM-NVPVD-LRIRQLQ 177
           L  SG+VD +T   + N+ V   RI +L 
Sbjct: 392 LPVSGVVDYNTWYEISNIYVAVTRIAELA 420


>gi|218290950|ref|ZP_03495007.1| spore cortex-lytic enzyme [Alicyclobacillus acidocaldarius LAA1]
 gi|218239115|gb|EED06318.1| spore cortex-lytic enzyme [Alicyclobacillus acidocaldarius LAA1]
          Length = 267

 Score = 40.2 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                R L  G++   V  L+ RL + G       +   F      AV+ FQ   GL  +
Sbjct: 31  QAFTARNLIYGSTGYDVDELQGRLHLLGYYWG--RIDGIFGWKTYWAVRTFQYNFGLPVT 88

Query: 155 GMVDSST 161
           G VD  T
Sbjct: 89  GEVDMRT 95


>gi|62858237|ref|NP_001015992.1| matrix metallopeptidase 16 [Xenopus (Silurana) tropicalis]
 gi|89271306|emb|CAJ82988.1| matrix metalloproteinase 16 (membrane-inserted) [Xenopus (Silurana)
           tropicalis]
          Length = 607

 Score = 40.2 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P+            ++SA+   Q  +G++ +G +D +T++ M  P
Sbjct: 45  LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINATGKIDKNTIDWMKKP 97


>gi|291445240|ref|ZP_06584630.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291348187|gb|EFE75091.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 486

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 10/140 (7%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
           P   S++  P+   VL + +        + R D  ++   +G  S    +  +   +T +
Sbjct: 115 PPAPSVLTAPVQRKVLSDTVITRGKVAASQRLD--VSGEGVGEKSSGRSVVTKAPVRTGQ 172

Query: 81  AIAFYQDILSRGGWP------ELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            +   Q +L   G P      E+P  R L  G++   V +L++ L   G        +  
Sbjct: 173 PLRMGQLLLEISGRPVFVLRGEVPAYRDLGPGSTGQDVSQLQQALAGLGY-GSGNDRAGT 231

Query: 134 FDAYVESAVKLFQMRHGLDP 153
           F    E+AV  F   HG  P
Sbjct: 232 FGPGTEAAVTRFYRAHGHAP 251


>gi|153941218|ref|YP_001390250.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
           Langeland]
 gi|152937114|gb|ABS42612.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
           Langeland]
 gi|295318345|gb|ADF98722.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
           230613]
          Length = 125

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++++N  A +L   ++  V     V VG+    TP    +I     NP
Sbjct: 17  HIIINTQAHTLTLFKDNNVYKTYKVAVGKPSTPTPKGTFKIINRAINP 64


>gi|255521659|ref|ZP_05388896.1| carboxy-terminal processing proteinase [Listeria monocytogenes FSL
           J1-175]
          Length = 323

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 235 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQAANKLDVTGIM 292

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 293 TGVTTDKL 300


>gi|254852755|ref|ZP_05242103.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|300763836|ref|ZP_07073833.1| carboxyl-terminal protease [Listeria monocytogenes FSL N1-017]
 gi|258606083|gb|EEW18691.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|300515572|gb|EFK42622.1| carboxyl-terminal protease [Listeria monocytogenes FSL N1-017]
          Length = 496

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQAANKLDVTGIM 465

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 466 TGVTTDKL 473


>gi|226224454|ref|YP_002758561.1| carboxy-terminal processing proteinase [Listeria monocytogenes
           Clip81459]
 gi|254826107|ref|ZP_05231108.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254931979|ref|ZP_05265338.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|254992637|ref|ZP_05274827.1| carboxy-terminal processing proteinase [Listeria monocytogenes FSL
           J2-064]
 gi|225876916|emb|CAS05625.1| Putative carboxy-terminal processing proteinase [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293583530|gb|EFF95562.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293595347|gb|EFG03108.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|328466201|gb|EGF37358.1| carboxy-terminal processing proteinase [Listeria monocytogenes
           1816]
 gi|328473572|gb|EGF44409.1| carboxy-terminal processing proteinase [Listeria monocytogenes 220]
 gi|332312292|gb|EGJ25387.1| Carboxy-terminal processing protease [Listeria monocytogenes str.
           Scott A]
          Length = 496

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQAANKLDVTGIM 465

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 466 TGVTTDKL 473


>gi|46908083|ref|YP_014472.1| carboxypeptidase family protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47093234|ref|ZP_00231006.1| carboxypeptidase family protein [Listeria monocytogenes str. 4b
           H7858]
 gi|46881353|gb|AAT04649.1| carboxypeptidase family protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47018366|gb|EAL09127.1| carboxypeptidase family protein [Listeria monocytogenes str. 4b
           H7858]
          Length = 468

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 380 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQAANKLDVTGIM 437

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 438 TGVTTDKL 445


>gi|290957976|ref|YP_003489158.1| peptidoglycan binding protein [Streptomyces scabiei 87.22]
 gi|260647502|emb|CBG70607.1| putative peptidoglycan binding protein [Streptomyces scabiei 87.22]
          Length = 311

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 29/149 (19%)

Query: 95  PELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P +    L   G+  + V+ L+ RL     L    G +  +D     AV  FQ + GL  
Sbjct: 98  PTVAPTVLWAQGDEGLDVRELQARLRQIAWL--FTGPTGTYDDLTVQAVSGFQGKRGLPR 155

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRI--KKLL------------EQKMGLRYVLVN 199
           +G  DS T   +            +++ R   K  L             + +  R + ++
Sbjct: 156 TGKTDSVTWARL------------LSMTREPGKWDLYAYGGQPAASPDPRCLTGRALCIS 203

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + +L  + +G+      V  G     T
Sbjct: 204 KTSRTLRWMVDGRTLTTVEVRFGSAYTPT 232


>gi|188586802|ref|YP_001918347.1| carboxyl-terminal protease [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351489|gb|ACB85759.1| carboxyl-terminal protease [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 476

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 21/98 (21%)

Query: 77  QTEKAIAFY-----QDILSRGGWPELPIRPLHL--------------GNSSVSVQRLRER 117
             +  +A Y     +DI   G  P++ I P  +              G+    V+ L+  
Sbjct: 343 ALQYTMAKYQTPDGRDIHEEGLNPDVEIDPPKILELTRQPISTDLSMGDEGEEVETLQSI 402

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           L        ++ ++  FD +   A++ FQ   G+  +G
Sbjct: 403 LKELDYF--TEEVTGEFDEHTRDALEKFQQARGISATG 438


>gi|325964353|ref|YP_004242259.1| peptidoglycan binding protein [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323470440|gb|ADX74125.1| putative peptidoglycan binding protein [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 734

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            G       +++  L   G L  +    +   D   E A++ FQ    L  +G+ D +T 
Sbjct: 20  PGERKPGFNKVQSYLERFGYLGATTAREIGVLDDPTEGALRSFQEFFHLPVTGVFDDATR 79

Query: 163 EAM 165
           EAM
Sbjct: 80  EAM 82


>gi|226324793|ref|ZP_03800311.1| hypothetical protein COPCOM_02579 [Coprococcus comes ATCC 27758]
 gi|225207241|gb|EEG89595.1| hypothetical protein COPCOM_02579 [Coprococcus comes ATCC 27758]
          Length = 128

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++++E+L +I+G     P   +   +     S+V+ FQ   GL  +
Sbjct: 44  PGYTLSQGSSGTKVRQMQEQLNVIAGAYPAIPKITVDGIYGPATASSVRKFQSVFGLPVT 103

Query: 155 GMVDSSTLE 163
           G VD  T  
Sbjct: 104 GTVDYRTWY 112


>gi|326441234|ref|ZP_08215968.1| hypothetical protein SclaA2_09211 [Streptomyces clavuligerus ATCC
           27064]
          Length = 525

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 21/69 (30%), Gaps = 6/69 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGD-----LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              G  S SV RL ERL   G        P      A D     A +  Q   G +  G 
Sbjct: 394 FRPGAVSPSVTRLGERLRQLGYGRHYTSGPGPDWGEA-DRRNVEAFQRAQGWSGTEADGY 452

Query: 157 VDSSTLEAM 165
               T   +
Sbjct: 453 PGPHTWRRL 461


>gi|257453413|ref|ZP_05618708.1| ErfK/YbiS/YcfS/YnhG [Enhydrobacter aerosaccus SK60]
 gi|257449165|gb|EEV24113.1| ErfK/YbiS/YcfS/YnhG [Enhydrobacter aerosaccus SK60]
          Length = 495

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 20/113 (17%)

Query: 65  SDIPIISKETIAQTEKA----------IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
           +  P     T+   + A          ++ Y  +++   W          G +  S   L
Sbjct: 175 TAAPTFDPTTVGNNKTATTPASFSTLNLSDYAQLVNSADW--------KPGQNVNSATTL 226

Query: 115 R-ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           + + L+      P       +    + A+K FQ  HGL   G + +   + +N
Sbjct: 227 KLQALLDWNHASPGPIDGG-WGMNAKKALKNFQAMHGLPQDGRMSAEVWKLLN 278


>gi|149374881|ref|ZP_01892654.1| hypothetical protein MDG893_07485 [Marinobacter algicola DG893]
 gi|149360770|gb|EDM49221.1| hypothetical protein MDG893_07485 [Marinobacter algicola DG893]
          Length = 300

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 135 DAYVESAVKLFQMRH-GLDPSGMVDSSTLEAMNVPVDL 171
           D  + SA++ +Q  H GL  +G +D  TL A+ +    
Sbjct: 54  DDTLRSAIRKYQSGHEGLQATGDLDPQTLSALGIAAKD 91


>gi|320592558|gb|EFX04988.1| negative regulator of beta-lactamase expression protein [Grosmannia
           clavigera kw1407]
          Length = 305

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 33/102 (32%), Gaps = 29/102 (28%)

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
            +AV  +Q  H L+  G++   T  A+                  +   +   G  Y++V
Sbjct: 47  AAAVARWQRDHALNIDGILGPKTAAALQG----------------RTW-KSPKGENYLIV 89

Query: 199 ---NIP-AASLEAVENGKVGLRSTVI--------VGRVDRQT 228
               +P +  +    + +      VI        VG+    T
Sbjct: 90  KGEKVPTSFPVVHWTHPEGFSFERVIEAIPDFNGVGKRANPT 131


>gi|167767428|ref|ZP_02439481.1| hypothetical protein CLOSS21_01947 [Clostridium sp. SS2/1]
 gi|167711403|gb|EDS21982.1| hypothetical protein CLOSS21_01947 [Clostridium sp. SS2/1]
          Length = 471

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINR 237
              +G  YV V++ A ++   + GK+   ++ + G+   DR+TP   + I  
Sbjct: 345 NGDIGDTYVEVDMGAQTVYYFKKGKLKFTTSCVTGKMTADRKTPECVAYILY 396


>gi|307946479|ref|ZP_07661814.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307770143|gb|EFO29369.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 305

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 3/61 (4%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEA 164
                V+  +E L   G  DP            ++AV  +Q  H  L   G++  +TL  
Sbjct: 174 QPDPVVEEAQEALKRFGF-DPGAIDGWM-GRRTKAAVLAYQKTHPHLTNDGIIGPATLAQ 231

Query: 165 M 165
           +
Sbjct: 232 L 232


>gi|291528185|emb|CBK93771.1| Putative peptidoglycan-binding domain-containing protein
           [Eubacterium rectale M104/1]
          Length = 420

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHG 150
           WP   I    +G+S  +V +++++L       P+         +    ++AV+ FQ   G
Sbjct: 335 WPGYNIG---IGSSGQNVYQIQKQLARIAKAYPAIPSIVPDGIYGPKTKAAVEKFQAVFG 391

Query: 151 LDPSGMVDSSTLEAM-NVPVD-LRIRQLQ 177
           L  SG+VD +T   + N+ V   RI +L 
Sbjct: 392 LPVSGVVDYNTWYEISNIYVAVTRIAELA 420


>gi|228943445|ref|ZP_04105889.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228976300|ref|ZP_04136771.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228783404|gb|EEM31512.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228816225|gb|EEM62406.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 595

 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIIS----GDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
              P   +  G+   SV+ +++ L        +L P   +S  FD+   +AVK+FQ    
Sbjct: 372 KSFPGYNIKEGDQKGSVRTIQKYLFQIRKKYSNL-PEIIISGTFDSNTVNAVKIFQRNFQ 430

Query: 151 LDPSGMVDSSTLEAMN 166
           +  +G+VD  T   +N
Sbjct: 431 IPDNGIVDELTWNKLN 446


>gi|182438498|ref|YP_001826217.1| hypothetical protein SGR_4705 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467014|dbj|BAG21534.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 430

 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 4/68 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGD----LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              G ++  V RL  +L+  G     L          D     A +  Q   G    G  
Sbjct: 361 FKPGQTNSHVDRLGRQLVKKGYGKHYLSGPDPRWTEADRRNVEAFQRAQGWRGGAADGYP 420

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 421 GPETWRRL 428


>gi|194366782|ref|YP_002029392.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194349586|gb|ACF52709.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 318

 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
            PG  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N  
Sbjct: 255 PPGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRMTNWD 300



 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 4/55 (7%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVES----AVKLFQMRHGLDPSGMVDSSTLEAM 165
           R  L     LD +       D  V S    AV  FQ  HGL  +G VD  T +A+
Sbjct: 42  RSALHAQVLLDRANFSPGQIDGEVGSNQRRAVSGFQAAHGLTVTGEVDDPTWKAL 96


>gi|300868169|ref|ZP_07112801.1| Sensor protein (modular protein) [Oscillatoria sp. PCC 6506]
 gi|300333793|emb|CBN57981.1| Sensor protein (modular protein) [Oscillatoria sp. PCC 6506]
          Length = 701

 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 13/95 (13%)

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLH------LGNSSVSVQRLRERLIISGDLDPSKGLS 131
           T +A+  Y    S G    +   P+        GN S+SV+ L+E+L           ++
Sbjct: 131 TRQAVISY----STGKPAMIFSTPIREFTNIYPGNRSLSVKELQEQLKTLDYYKG--LIT 184

Query: 132 VAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEAM 165
             +D     AV  FQ  + GL  +G V+ +T + +
Sbjct: 185 GNYDRPTAKAVSQFQKAYPGLPDNGTVNLTTKQLL 219


>gi|166153471|ref|YP_001653985.1| peptidoglycan binding protein [Bacillus thuringiensis]
 gi|165875310|gb|ABY68467.1| putative peptidoglycan binding protein [Bacillus thuringiensis]
          Length = 178

 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L  G++   V +L+  L   G       +   F   ++ +V  +Q  H L  +
Sbjct: 97  PTQNRPTLRKGSTGYWVVKLQGFLQKIGYYSG--RIDGQFGHILDGSVSNYQRDHRLIIN 154

Query: 155 GMVDSSTLEAM 165
           G+V   T   +
Sbjct: 155 GIVGPKTWCQL 165


>gi|321469983|gb|EFX80961.1| hypothetical protein DAPPUDRAFT_303785 [Daphnia pulex]
          Length = 559

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 15/82 (18%)

Query: 118 LIISGDLDPS----KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G LDP+       ++     V  A+  FQ   GL+ +G++D  T   M+ P     
Sbjct: 3   LARFGYLDPALQNPSSGALISGDSVRRAIIDFQSFAGLNQTGILDPETSTWMSKPRCGVR 62

Query: 169 ------VDLRIRQLQVNLMRIK 184
                    R ++  +   R +
Sbjct: 63  DRVGAGSSARRKRYALQGARWR 84


>gi|163761080|ref|ZP_02168157.1| putative amidase (ampd protein) [Hoeflea phototrophica DFL-43]
 gi|162281631|gb|EDQ31925.1| putative amidase (ampd protein) [Hoeflea phototrophica DFL-43]
          Length = 259

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 12/118 (10%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRP---LHLGNSSV 109
           N +A   +   SDI  + K+   +       Y++    G W   LP+        G+S  
Sbjct: 137 NGIAAERVLAHSDIAPMRKQDPGEMFPWNRLYRE--GIGHWVEPLPVGGGRFFQEGDSGQ 194

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP--SGMVDSSTLEAM 165
            V+ L+  L + G       +   + A   + V+ FQ RH       G+ D+ST+  +
Sbjct: 195 PVEALQTMLALYGY---GLEVDGVYSAQTAAVVRAFQ-RHFRPARVDGIADASTIGTL 248


>gi|326779144|ref|ZP_08238409.1| hypothetical protein SACT1_5003 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326659477|gb|EGE44323.1| hypothetical protein SACT1_5003 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 430

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 4/68 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGD----LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              G ++  V RL  +L+  G     L          D     A +  Q   G    G  
Sbjct: 361 FKPGQTNSHVDRLGRQLVKKGYGKHYLSGPDPRWTEADRRNVEAFQRAQGWRGGAADGYP 420

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 421 GPETWRRL 428


>gi|149637115|ref|XP_001506645.1| PREDICTED: similar to metalloproteinase [Ornithorhynchus anatinus]
          Length = 616

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 16/95 (16%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDP 153
            +P R L  G            L   G L P+            ++SA+   Q  +G++ 
Sbjct: 44  SVPSRVLSPGVW----------LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINM 93

Query: 154 SGMVDSSTLEAMNVP----VDLRIRQLQVNLMRIK 184
           +G VD +T++ M  P     D      + N+ R +
Sbjct: 94  TGKVDRNTIDWMKKPRCGVPDQTRGSSRFNIRRKR 128


>gi|118578915|ref|YP_900165.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
 gi|118501625|gb|ABK98107.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
          Length = 292

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             +   +Y+LV++    L A ENG++   +    G+   +TP
Sbjct: 122 PARRYDKYILVDLTEQWLGAYENGRLVFSTPAATGKAGNETP 163


>gi|296131513|ref|YP_003638763.1| Peptidoglycan-binding domain 1 protein [Cellulomonas flavigena DSM
           20109]
 gi|296023328|gb|ADG76564.1| Peptidoglycan-binding domain 1 protein [Cellulomonas flavigena DSM
           20109]
          Length = 165

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 10/68 (14%)

Query: 102 LHLGNSSVSVQRL--------RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           L  G+    V+ L        R  L  +G       +   F A   +AVK  Q   G+  
Sbjct: 78  LQYGSRGPGVKALQAAINECHRATLNAAGL--ALLSVDGDFGAKTRTAVKAVQRSLGITV 135

Query: 154 SGMVDSST 161
            G+   +T
Sbjct: 136 DGVYGPTT 143


>gi|153955451|ref|YP_001396216.1| glycosyl hydrolase [Clostridium kluyveri DSM 555]
 gi|219855864|ref|YP_002472986.1| hypothetical protein CKR_2521 [Clostridium kluyveri NBRC 12016]
 gi|146348309|gb|EDK34845.1| Predicted glycosyl hydrolase [Clostridium kluyveri DSM 555]
 gi|219569588|dbj|BAH07572.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 306

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ S  V  ++++L   G L  +    + +D     AV   Q   G    G++   T 
Sbjct: 243 GHRSHLVLWIQQKLEQYGYLKENSYTQMLYDETTFQAVTELQKNWGRSTDGVLKLQTW 300


>gi|86139891|ref|ZP_01058457.1| hypothetical protein MED193_12698 [Roseobacter sp. MED193]
 gi|85823520|gb|EAQ43729.1| hypothetical protein MED193_12698 [Roseobacter sp. MED193]
          Length = 431

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 12/97 (12%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           +A  + AI   + I    GW  L +       S    + ++  L   G  D      V  
Sbjct: 347 LAGIQDAI---EAIAGACGWSTLDL-------SRDDYRAIQTMLNAGGF-DAGTPDGVWG 395

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           +    +A++ FQ ++GL P+G  D +TLEA+ +    
Sbjct: 396 NGS-RNAMRTFQEQNGLAPTGAPDRATLEALGIQASD 431


>gi|255010410|ref|ZP_05282536.1| putative phage-related protein [Bacteroides fragilis 3_1_12]
 gi|313148212|ref|ZP_07810405.1| peptidoglycan-binding domain 1 protein [Bacteroides fragilis
           3_1_12]
 gi|313136979|gb|EFR54339.1| peptidoglycan-binding domain 1 protein [Bacteroides fragilis
           3_1_12]
          Length = 264

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           ++ + L         L + L  +G    S   S  F   ++ +V  FQ +  LD  G+V 
Sbjct: 1   MKTIKLDYEGEEALLLCQGLKRNGY---SVNESRIFTQEMKESVVDFQRKSQLDADGIVG 57

Query: 159 SSTLEAM---NVPVDLRI 173
             T E++     P   R+
Sbjct: 58  YRTWESLFFTGRPTTERL 75


>gi|160937909|ref|ZP_02085267.1| hypothetical protein CLOBOL_02803 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439135|gb|EDP16889.1| hypothetical protein CLOBOL_02803 [Clostridium bolteae ATCC
           BAA-613]
          Length = 416

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L  I +     P       + +   +AV+ FQ   GL  +
Sbjct: 332 PGSDLTIGSSGDKVRQMQEQLDEIATVYSAIPRVTPDGIYGSGTANAVREFQSIFGLPQT 391

Query: 155 GMVDSSTLE 163
           G+VD +T  
Sbjct: 392 GVVDFATWY 400


>gi|23098711|ref|NP_692177.1| hypothetical protein OB1256 [Oceanobacillus iheyensis HTE831]
 gi|22776938|dbj|BAC13212.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
          Length = 245

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L   +  + V+ ++ +L   G       +   F +  E  V  FQ +H L   G+V   
Sbjct: 59  TLKEDSVGLEVELVQVKLNHFGF---ETDVDGIFGSKTEKQVMNFQKKHDLIIDGIVGEE 115

Query: 161 TLEAM 165
           T  A+
Sbjct: 116 TWIAL 120


>gi|303238433|ref|ZP_07324968.1| carboxyl-terminal protease [Acetivibrio cellulolyticus CD2]
 gi|302594137|gb|EFL63850.1| carboxyl-terminal protease [Acetivibrio cellulolyticus CD2]
          Length = 497

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD----L 171
           + L   G         +  D     A+  FQ  +GL P G++D ST +A+N  ++     
Sbjct: 426 KILKFCGY--EVDSPDMFLDGETSDAIYKFQKDNGLYPYGVLDFSTQQALNNKLEKLQSE 483

Query: 172 RIRQLQVNLM 181
             +Q+   L 
Sbjct: 484 YDKQMAKALE 493


>gi|237756533|ref|ZP_04585060.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691307|gb|EEP60388.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 254

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           +KK L +      V V++    L     +E+G   +   V  G  +  TP     I    
Sbjct: 106 LKKKLPENFNYNTVYVSLKDKRLYYPIKLEDGDYVITFPVGTGDEEYPTPTGEFTITEKK 165

Query: 240 FNPYWVIPRS 249
            NP W++P S
Sbjct: 166 VNPDWIVPPS 175


>gi|291520973|emb|CBK79266.1| Cell wall-associated hydrolases (invasion-associated proteins)
           [Coprococcus catus GD/7]
          Length = 331

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
              + + +   V  FQ +HGLD +G VD +T  AM +  + 
Sbjct: 134 GALYTSEIADTVADFQAQHGLDATGTVDLTTWLAMGLSEED 174


>gi|258655247|ref|YP_003204403.1| transglycosylase [Nakamurella multipartita DSM 44233]
 gi|258558472|gb|ACV81414.1| Transglycosylase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 317

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P R    G++++ +Q  +++L   G        +  +    ++AV   Q  +G++PS
Sbjct: 246 PAWPGRQFVQGDTALELQCFQKQLASRGY---PLTGTGYYGPATKTAVVQLQNANGINPS 302

Query: 155 GMVDSSTLEA 164
           G++   T  A
Sbjct: 303 GILGPKTWAA 312


>gi|149458799|ref|XP_001516526.1| PREDICTED: similar to matrix metalloproteinase-21, partial
           [Ornithorhynchus anatinus]
          Length = 488

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 12/27 (44%), Positives = 18/27 (66%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           V+ FQ  +GL  +G +D +T+ AMN P
Sbjct: 31  VRGFQRVNGLPATGRLDEATVAAMNGP 57


>gi|47215834|emb|CAG00689.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 618

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 7/94 (7%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  +        +   + SAV   Q  +GL+ +G +D  T+ AM  P     D 
Sbjct: 4   LRMYGYLPQASRQMSTMRSAQILSSAVSDMQRFYGLEVTGKMDPETISAMKRPRCGVPDK 63

Query: 172 RIRQLQVNLMRIKK-LLEQKMGLRYVLVNIPAAS 204
              Q++ N+ R +  L   K     +  +I   +
Sbjct: 64  FGGQIKTNVRRKRYALTGHKWSKNRLTYSIQNYT 97


>gi|317500504|ref|ZP_07958727.1| hypothetical protein HMPREF1026_00670 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316898093|gb|EFV20141.1| hypothetical protein HMPREF1026_00670 [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 482

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 57/175 (32%), Gaps = 55/175 (31%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWV 245
            Q  G  Y+ V++ A  +  + NG + L + V+ G  D    TP   + +  I++     
Sbjct: 347 AQDWGTTYLEVDLSAQHMWYIVNGAIALETDVVTGLPDAKHATP---AGVYSILY----T 399

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P S +  +      +DP            E GK ++   V +  P    F + Q  G  
Sbjct: 400 EPDSKLIGE------KDP------------ETGKPIYETYVRYWMP----FTY-QGHG-- 434

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILF--NNVVRFETSGCVRVRNIIDLDVWLLK 358
                             HD      F  +    + + GC  V   +D    L  
Sbjct: 435 -----------------FHDADWQTAFGGSRYQSYGSHGC--VNMPVDQAGALFN 470


>gi|188580147|ref|YP_001923592.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium populi BJ001]
 gi|179343645|gb|ACB79057.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium populi BJ001]
          Length = 250

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 49/129 (37%), Gaps = 21/129 (16%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW------------PELPIRP 101
             + R+   I     I +   +A ++ A A  +D      W            P  P+R 
Sbjct: 117 AAVTRLARDIVVRRAIPAPRVLAHSDVAPARKEDPGENFPWERLAQEGVGHWVPPAPVRD 176

Query: 102 ---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP--SGM 156
              L +G +   V+ L+  L + G   P  G    FDA   + V  FQ RH       G+
Sbjct: 177 GRFLAMGETGQPVEALQAMLALYGYAQPVTG---QFDAATGAVVTAFQ-RHFRPARIDGV 232

Query: 157 VDSSTLEAM 165
            DSST+  +
Sbjct: 233 ADSSTITTL 241


>gi|153816184|ref|ZP_01968852.1| hypothetical protein RUMTOR_02432 [Ruminococcus torques ATCC 27756]
 gi|331089397|ref|ZP_08338296.1| hypothetical protein HMPREF1025_01879 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145846519|gb|EDK23437.1| hypothetical protein RUMTOR_02432 [Ruminococcus torques ATCC 27756]
 gi|330404765|gb|EGG84303.1| hypothetical protein HMPREF1025_01879 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 469

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 57/175 (32%), Gaps = 55/175 (31%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWV 245
            Q  G  Y+ V++ A  +  + NG + L + V+ G  D    TP   + +  I++     
Sbjct: 334 AQDWGTTYLEVDLSAQHMWYIVNGAIALETDVVTGLPDAKHATP---AGVYSILY----T 386

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P S +  +      +DP            E GK ++   V +  P    F + Q  G  
Sbjct: 387 EPDSKLIGE------KDP------------ETGKPIYETYVRYWMP----FTY-QGHG-- 421

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILF--NNVVRFETSGCVRVRNIIDLDVWLLK 358
                             HD      F  +    + + GC  V   +D    L  
Sbjct: 422 -----------------FHDADWQTAFGGSRYQSYGSHGC--VNMPVDQAGALFN 457


>gi|319408149|emb|CBI81802.1| peptidoglycan-binding protein [Bartonella schoenbuchensis R1]
          Length = 418

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L+ RL   GD        +      + A+K FQ+RHGL+ +G
Sbjct: 365 ELQSRLAALGDYKGEIDGKIG--TASKQAIKSFQLRHGLEANG 405


>gi|238059701|ref|ZP_04604410.1| peptidoglycan-binding protein [Micromonospora sp. ATCC 39149]
 gi|237881512|gb|EEP70340.1| peptidoglycan-binding protein [Micromonospora sp. ATCC 39149]
          Length = 444

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 51/165 (30%), Gaps = 15/165 (9%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
               + +  P  A+V  + + ++    V+        R              +T A   +
Sbjct: 122 DAAEAGIAPPASATVTRQTLADAKT--VDGELGYGPDRTAASRLPGTITALPDTGATVSR 179

Query: 81  AIAFYQDILSRGGWPEL-------PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
             A Y    +  G P +         R L  G       +    L   G       +   
Sbjct: 180 GRALY----AVDGDPVVLLYGKLPAYRMLQPGVEGPDAAQFERNLKALGY--SGFTVDDE 233

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
           + +    AV+ +Q   G+  +G V+   +   + PV +   QL +
Sbjct: 234 YTSATADAVRAWQDDLGVAETGRVEPGRIGYADGPVRVEGHQLDL 278


>gi|304385536|ref|ZP_07367880.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Pediococcus acidilactici
           DSM 20284]
 gi|304328040|gb|EFL95262.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Pediococcus acidilactici
           DSM 20284]
          Length = 457

 Score = 40.2 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTP 229
           ++G  YV V+     +   ++GK+ + + V+ G+      TP
Sbjct: 328 ELGTTYVEVDKTNQHMWYYKDGKLQISTDVVTGKPSGGNTTP 369


>gi|307330400|ref|ZP_07609544.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306883917|gb|EFN14959.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 382

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           R +  G+    V++L E L   G           F      AV+ +Q   GL  +G V
Sbjct: 143 RDMKSGDKGEDVRQLEENLQALGY--SGFTPDSEFTDLTAQAVERWQKTLGLSQTGKV 198


>gi|269128526|ref|YP_003301896.1| peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
 gi|268313484|gb|ACY99858.1| Peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
          Length = 440

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 14/83 (16%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V++L   L   G  DP + L   +D   E AV+ +  +HG +P+G    
Sbjct: 134 RTLGPGDKGEDVEQLERALARLGF-DPGR-LDGRYDGATERAVEKWYGKHGYEPAG---- 187

Query: 160 STLEAMNVPVDLRIRQLQVNLMR 182
                   P      +L+    R
Sbjct: 188 --------PTAEDRSRLEAARER 202


>gi|270290196|ref|ZP_06196422.1| hypothetical protein HMPREF9024_00382 [Pediococcus acidilactici
           7_4]
 gi|270281733|gb|EFA27565.1| hypothetical protein HMPREF9024_00382 [Pediococcus acidilactici
           7_4]
          Length = 457

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTP 229
           ++G  YV V+     +   ++GK+ + + V+ G+      TP
Sbjct: 328 ELGTTYVEVDKTNQHMWYYKDGKLQISTDVVTGKPSGGNTTP 369


>gi|298527994|ref|ZP_07015398.1| Peptidoglycan-binding domain 1 protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511646|gb|EFI35548.1| Peptidoglycan-binding domain 1 protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 412

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 16/84 (19%)

Query: 94  WPELPIRP------------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           WP    R             L   N+  +   +  RL   G L  +          +E A
Sbjct: 327 WPAFDGRTALQGPIARLGIMLEPENADDA-GMIASRLHELGFLKNADNKCE---EKLEEA 382

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           +K+FQ   GL+PSG   + T + +
Sbjct: 383 LKIFQHTRGLNPSGQWSAETQKKL 406


>gi|323454425|gb|EGB10295.1| hypothetical protein AURANDRAFT_62829 [Aureococcus anophagefferens]
          Length = 749

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 8/62 (12%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + +  G++      +   L + G     K     F A V   V+  Q   GL   G+V  
Sbjct: 511 KSVKEGDADDDAAEV---LKLLG-----KEPGAGFTAEVSDEVRKIQRAAGLVDDGVVGP 562

Query: 160 ST 161
            T
Sbjct: 563 KT 564


>gi|237793906|ref|YP_002861458.1| hypothetical protein CLJ_B0656 [Clostridium botulinum Ba4 str. 657]
 gi|229260455|gb|ACQ51488.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
          Length = 694

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 9/149 (6%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP---IISKETIAQTEKAIAFYQ 86
            +  S +DE +  S       +    L R        IP   + S++T     KA+   +
Sbjct: 125 KVLLSTMDEFVLASTGDPNVRKIQQNLNRDYYETIGLIPCNGVYSRDTNRALIKALQVEE 184

Query: 87  DILSRGGWPELPIR--PLHLGNSSVS--VQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I   G W        P   G++S    V  L+  L ++G +DP  G    F   + +A+
Sbjct: 185 GITPDGIWGPGTQDKCPTIPGSNSNQRYVLLLQYSLYVNG-IDP-NGFDGLFGNGLSNAI 242

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           K FQ    L   G        ++ V    
Sbjct: 243 KEFQSFCALPADGYAGKQVWASLLVSTGD 271


>gi|154685699|ref|YP_001420860.1| XlyA [Bacillus amyloliquefaciens FZB42]
 gi|154351550|gb|ABS73629.1| XlyA [Bacillus amyloliquefaciens FZB42]
          Length = 292

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 4/62 (6%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               S   V +++  L            + G+   +      AV  FQ  +GL   G+  
Sbjct: 222 EPYTSGEKVYQVQNALAALYFYPEKGAVNNGIDGIYGPKTADAVARFQSVNGLTSDGVYG 281

Query: 159 SS 160
            +
Sbjct: 282 PA 283


>gi|16264761|ref|NP_437553.1| hypothetical protein SM_b21573 [Sinorhizobium meliloti 1021]
 gi|15140899|emb|CAC49413.1| hypothetical exported protein [Sinorhizobium meliloti 1021]
          Length = 327

 Score = 39.8 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 8/57 (14%)

Query: 303 GKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           G  N + +  I+          H TPEP L +     ++ GCVR+ N    +L   +
Sbjct: 266 GPNNPVGTVWIDLTEPTYGI--HGTPEPSLIDK---AQSHGCVRLTNWDAEELAAMV 317


>gi|269217207|ref|ZP_06161061.1| penicillin-resistant DD-carboxypeptidase [Slackia exigua ATCC
           700122]
 gi|269129344|gb|EEZ60429.1| penicillin-resistant DD-carboxypeptidase [Slackia exigua ATCC
           700122]
          Length = 247

 Score = 39.8 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               V+ L+  L   G      G+   F AY E A++ FQ+  GL   G+    T + +
Sbjct: 29  QGEDVEDLQTALGALGF--SCGGVDGTFGAYTEGALRKFQVNMGLVSDGIAGVKTYDTL 85


>gi|171702397|dbj|BAG16271.1| matrix metalloproteinase 9 [Rhabdophis tigrinus tigrinus]
          Length = 677

 Score = 39.8 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 95  PELPIRPLHLGNSSVSVQ--RLRER-LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P+ P+     G++   +    L  R L   G L  S          +E+ +K  Q + GL
Sbjct: 28  PKGPVVVNFPGDALSLLTDRELAARYLQRYGYLTASNPGGQV---KLETPLKAMQKQLGL 84

Query: 152 DPSGMVDSSTLEAMNVP 168
             +G +D+STL AM  P
Sbjct: 85  PETGELDASTLAAMRAP 101


>gi|284044768|ref|YP_003395108.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
 gi|283948989|gb|ADB51733.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
          Length = 349

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
           V V+    ++     G++    +V VG  +  TP     +  +  +P W +P S
Sbjct: 222 VTVSKSGTTVRVFVRGELSKTYSVAVGSAEYPTPGGQFTVQTMQVDPPWNVPNS 275


>gi|255648146|gb|ACU24527.1| unknown [Glycine max]
          Length = 388

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 17/107 (15%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L   G ++ S+  + +FD    SA+K +Q    L  +G+ +   ++ M   + LR     
Sbjct: 97  LSEYGYIESSRPFNNSFDQETMSAIKTYQKFSNLPVTGVPNKQLIQQM---LSLRCGVPD 153

Query: 178 VNLMRI-------------KKLLEQKMGLRYVLVN-IPAASLEAVEN 210
           VN                 +    + +   ++  N IP    +   +
Sbjct: 154 VNFDYNFTDDNTSYPKAGHRWFPNRNLTYGFLPENQIPDNMTKVFRD 200


>gi|331084634|ref|ZP_08333722.1| hypothetical protein HMPREF0987_00025 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410728|gb|EGG90150.1| hypothetical protein HMPREF0987_00025 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 128

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++++E L +I+G     P   +   +     ++VK FQ   GL  +
Sbjct: 44  PGYVLENGSSGNKVRQMQEELNVIAGAYPAIPKITVDGIYGPATAASVKKFQSVFGLPAT 103

Query: 155 GMVDSSTLE 163
           G VD  T  
Sbjct: 104 GTVDYRTWY 112


>gi|301631743|ref|XP_002944955.1| PREDICTED: matrix metalloproteinase-21-like, partial [Xenopus
           (Silurana) tropicalis]
          Length = 409

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 22/115 (19%)

Query: 80  KAIAFYQDIL----SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           + +  Y  +         + + P+  L   + S         LI  G+ +    +S + +
Sbjct: 1   QYLVKYGWVAPVNWEEQAFTDFPVHDLAPQDVSQ--------LISEGESEEHPRVSNSSE 52

Query: 136 AYVE------SAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDLRIRQLQVNL 180
              E       ++K FQ  +GL  +G++DS+T  AMN P     D ++   + N 
Sbjct: 53  NETEINPSFIDSLKKFQDANGLTATGVLDSATKIAMNKPRCGVPDFKVASRRKNA 107


>gi|157737917|ref|YP_001490601.1| hypothetical protein Abu_1684 [Arcobacter butzleri RM4018]
 gi|157699771|gb|ABV67931.1| hypothetical protein Abu_1684 [Arcobacter butzleri RM4018]
          Length = 196

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMN 166
           A+K  Q   G+   G++ + TL+A+N
Sbjct: 117 AIKEAQKLIGVTADGIIGTQTLKALN 142


>gi|167039606|ref|YP_001662591.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           sp. X514]
 gi|300915144|ref|ZP_07132459.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307725068|ref|YP_003904819.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|166853846|gb|ABY92255.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X514]
 gi|300888868|gb|EFK84015.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307582129|gb|ADN55528.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
          Length = 422

 Score = 39.8 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               R L+ G     V+ L+  L  +G    +  +   F     + V  FQ    L P G
Sbjct: 38  TFGSRLLYSGTYGTDVEELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDG 95

Query: 156 MVDSSTLEAM 165
           +V      A+
Sbjct: 96  IVGPKIYAAL 105


>gi|255526573|ref|ZP_05393481.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296187551|ref|ZP_06855946.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7]
 gi|255509758|gb|EET86090.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296048073|gb|EFG87512.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7]
          Length = 125

 Score = 39.8 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 19/48 (39%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           Y+ +N  + +L    N  +     V VG+    TP    +I     NP
Sbjct: 17  YIKINTQSHTLTLFRNNSIYKTYRVAVGKPSTPTPKGTFKIINRAINP 64


>gi|307313300|ref|ZP_07592924.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|307320767|ref|ZP_07600178.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306893585|gb|EFN24360.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306899313|gb|EFN29948.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 327

 Score = 39.8 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 8/57 (14%)

Query: 303 GKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           G  N + +  I+          H TPEP L +     ++ GCVR+ N    +L   +
Sbjct: 266 GPNNPVGTVWIDLTEPTYGI--HGTPEPSLIDK---AQSHGCVRLTNWDAEELAAMV 317


>gi|302551661|ref|ZP_07304003.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
 gi|302469279|gb|EFL32372.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
          Length = 510

 Score = 39.8 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 4/68 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDP-SKGLSVAFDAYVESAVKLFQM---RHGLDPSGMV 157
              G ++  + R+R +L+  G     +      +      AV+ FQ      G    G  
Sbjct: 441 FRPGEANPHITRMRRQLVRKGFGRFYTAEPGPRWSEADRRAVEAFQRTQGWRGGAADGFP 500

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 501 GPETWRRL 508


>gi|153954450|ref|YP_001395215.1| hydrolase [Clostridium kluyveri DSM 555]
 gi|219855040|ref|YP_002472162.1| hypothetical protein CKR_1697 [Clostridium kluyveri NBRC 12016]
 gi|146347331|gb|EDK33867.1| Predicted hydrolase [Clostridium kluyveri DSM 555]
 gi|219568764|dbj|BAH06748.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 279

 Score = 39.8 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 1/63 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE- 163
           G+ S  V  L+++L + G L       + +D     AV   Q        G++   T   
Sbjct: 216 GHKSHIVLWLQQKLEMWGYLKKGSYTDMIYDEPTFQAVTELQKNWERPTDGVLKIETWNI 275

Query: 164 AMN 166
            +N
Sbjct: 276 FLN 278


>gi|328954812|ref|YP_004372145.1| Peptidoglycan-binding domain 1 protein [Coriobacterium glomerans
           PW2]
 gi|328455136|gb|AEB06330.1| Peptidoglycan-binding domain 1 protein [Coriobacterium glomerans
           PW2]
          Length = 301

 Score = 39.8 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           + P+  G    +V+ ++ RL++ G  +D ++     F +    AV+ F+    L P G
Sbjct: 1   MEPITAGMQGPAVEDVQTRLVLLGHAIDATELDDQRFGSSTARAVRSFRQSKAL-PDG 57



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 12/82 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W +L      LG+              V+ L+  L   G    S      F  + E+A++
Sbjct: 65  WSKLVDASYRLGDRTLYLRLPNFHGADVRELQTALNTLGFSCGSADS--HFGPHTEAALQ 122

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            FQ   GL   GM    T   +
Sbjct: 123 QFQENVGLFADGMAFQDTFSYI 144


>gi|254500718|ref|ZP_05112869.1| N-acetylmuramoyl-L-alanine amidase domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222436789|gb|EEE43468.1| N-acetylmuramoyl-L-alanine amidase domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 263

 Score = 39.8 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSS 160
           +  G     V+ L+  L + G       ++  FD      V  FQ         G+VD+S
Sbjct: 191 MQEGEEGQPVEALQSMLALYGY---EVDINGRFDRRTSEVVTAFQRHFRPEKVDGVVDAS 247

Query: 161 TLEAM 165
           T+E +
Sbjct: 248 TIETL 252


>gi|163844269|ref|YP_001621924.1| lytic murein transglycosylase [Brucella suis ATCC 23445]
 gi|163674992|gb|ABY39102.1| lytic murein transglycosylase [Brucella suis ATCC 23445]
          Length = 408

 Score = 39.8 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 6/53 (11%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D   G +        +A++ FQ R+GL+P G      L  +
Sbjct: 359 ELQTHLKALGYYDGKIGATSR------AAIEAFQQRNGLEPDGHPSKEVLSVL 405


>gi|149915748|ref|ZP_01904273.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. AzwK-3b]
 gi|149810330|gb|EDM70175.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. AzwK-3b]
          Length = 184

 Score = 39.8 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 8/60 (13%)

Query: 298 FRQDPGKINAMA-STKIEFYSRNNTYM--HDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
           + Q  G  N +       F +  +TY   H T  P    ++ R  ++GC+R+   ++ DL
Sbjct: 115 YVQPGGPENPLGARALYLFQNGRDTYFRIHGTNAPR---SIGRSVSNGCIRMLNEHVQDL 171


>gi|23499837|ref|NP_699277.1| transglycosylase [Brucella suis 1330]
 gi|161620160|ref|YP_001594046.1| lytic murein transglycosylase [Brucella canis ATCC 23365]
 gi|254702504|ref|ZP_05164332.1| lytic murein transglycosylase [Brucella suis bv. 3 str. 686]
 gi|260568590|ref|ZP_05839059.1| lytic murein transglycosylase [Brucella suis bv. 4 str. 40]
 gi|261753077|ref|ZP_05996786.1| lytic Murein transglycosylase [Brucella suis bv. 3 str. 686]
 gi|23463407|gb|AAN33282.1| transglycosylase, putative [Brucella suis 1330]
 gi|161336971|gb|ABX63275.1| lytic murein transglycosylase [Brucella canis ATCC 23365]
 gi|260155255|gb|EEW90336.1| lytic murein transglycosylase [Brucella suis bv. 4 str. 40]
 gi|261742830|gb|EEY30756.1| lytic Murein transglycosylase [Brucella suis bv. 3 str. 686]
          Length = 408

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 6/53 (11%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D   G +        +A++ FQ R+GL+P G      L  +
Sbjct: 359 ELQTHLKALGYYDGKIGATSR------AAIEAFQQRNGLEPDGHPSKEVLSVL 405


>gi|328882661|emb|CCA55900.1| hypothetical protein SVEN_2614 [Streptomyces venezuelae ATCC 10712]
          Length = 464

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 4/70 (5%)

Query: 100 RPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                G S+  V++L ++L+  G     L          D     A +  Q   G    G
Sbjct: 393 GSFRPGQSNAYVEKLGKQLVKRGFGKHYLSGPGPRWTEADRRNVEAFQRAQGWRGAAADG 452

Query: 156 MVDSSTLEAM 165
                T   +
Sbjct: 453 YPGPETWRRL 462


>gi|294944769|ref|XP_002784421.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239897455|gb|EER16217.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 1445

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 139  ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
              A+K FQ  H L   G +D  T + +   ++ R ++++    R
Sbjct: 1015 VDAIKGFQEYHSLPVDGNMDDRTWQLLVDSLETRRQKIE---ER 1055


>gi|188996891|ref|YP_001931142.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931958|gb|ACD66588.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 254

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           +KK L +      V V++    L     +E+G   +   V  G  +  TP     I    
Sbjct: 106 LKKKLPENFNYNTVYVSLKDKRLYYPIKLEDGDYVITFPVGTGDEEYPTPTGEFAITEKK 165

Query: 240 FNPYWVIPRS 249
            NP W++P S
Sbjct: 166 INPDWIVPPS 175


>gi|168181513|ref|ZP_02616177.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|182675396|gb|EDT87357.1| conserved hypothetical protein [Clostridium botulinum Bf]
          Length = 694

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 6/107 (5%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVS--VQRLRERLIISGDL 124
           + S++T     KA+   + I   G W        P   G++S    V  L+  L ++G +
Sbjct: 167 VYSRDTNRALIKALQVEEGITPDGIWGPGTQDKCPTIPGSNSNQRYVLLLQYSLYVNG-I 225

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           DP  G    F   + +A+K FQ    L   G        ++ V    
Sbjct: 226 DP-NGFDGLFGNGLSNAIKEFQSFCALPADGYAGKQVWASLLVSTGD 271


>gi|149733599|ref|XP_001499275.1| PREDICTED: similar to matrix metalloproteinase 24 preproprotein
           (predicted) [Equus caballus]
          Length = 666

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 13/145 (8%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           L++ P  A+ L  +I     +      D   +  +  +   +P        +    I  +
Sbjct: 25  LIQNPKCATSLGMVIVWLVVASWVWAKDIVQSAREFPLVHLLPTQELVAAKRQRCTIKVF 84

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA--YVESAVK 143
              L R  W  L            ++ RL   L   G L P    + A  +   ++SAV 
Sbjct: 85  VKKLRRALWAIL-----------KALFRLANWLKSYGYLLPYDSRASALHSGKALQSAVS 133

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVP 168
             Q  +G+  +G++D +T+E M  P
Sbjct: 134 TMQQFYGIPVTGVLDQTTIEWMKKP 158


>gi|313888150|ref|ZP_07821824.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845840|gb|EFR33227.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 479

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRI 235
             +G  Y+ V++    L   ++G + L + V+ G       TP    RI
Sbjct: 326 DDVGNTYIEVDLARQKLWYYKDGVLQLETNVVTGNPTKGNGTPTGTDRI 374


>gi|148379399|ref|YP_001253940.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931814|ref|YP_001383776.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|153936376|ref|YP_001387326.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
 gi|148288883|emb|CAL82968.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
           A str. ATCC 3502]
 gi|152927858|gb|ABS33358.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|152932290|gb|ABS37789.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
          Length = 275

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 28/76 (36%), Gaps = 8/76 (10%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           SR G+   P      G      + +++ LI  G    S G S         AVK FQ   
Sbjct: 203 SRQGFNTFPA--CRQGARGNITKIIQQMLINIGYTVGSFGNST------VMAVKSFQRDC 254

Query: 150 GLDPSGMVDSSTLEAM 165
            L    +V   T +A+
Sbjct: 255 NLSADVLVGKETWKAL 270


>gi|261855752|ref|YP_003263035.1| ErfK/YbiS/YcfS/YnhG family protein [Halothiobacillus neapolitanus
           c2]
 gi|261836221|gb|ACX95988.1| ErfK/YbiS/YcfS/YnhG family protein [Halothiobacillus neapolitanus
           c2]
          Length = 220

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 61/199 (30%), Gaps = 59/199 (29%)

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL-----RSTVIV 221
           V    ++  L +N               +++V+     L   E  ++ L      S V V
Sbjct: 44  VTAQKQVHSLLMN--------SGAGDAPFIIVDASDQKLYLFERNQLKLNFSVSTSAVGV 95

Query: 222 GRVD--RQTPI-LHSRINRIMFNPYWVIPRSIIQK-------DMMALLRQDPQYLKDNNI 271
           G  +   +TP+ LH                 I +K        M+   R+    L D   
Sbjct: 96  GSAEGSNRTPLGLH----------------RIAEKFGDGEPIGMIFKARRPTGQLADIQT 139

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN--TYMHDTPEP 329
             I   G +V    + W             PG               +    Y+H TPE 
Sbjct: 140 KPIKGDGDDVT-TRIMWLQGL--------QPGINEGKGV------DSHARYIYIHGTPEE 184

Query: 330 ILFNNVVRFETSGCVRVRN 348
            L     R E+ GC+R+ N
Sbjct: 185 GLIG---RPESHGCIRMNN 200


>gi|315649800|ref|ZP_07902883.1| carboxyl-terminal protease [Paenibacillus vortex V453]
 gi|315274774|gb|EFU38155.1| carboxyl-terminal protease [Paenibacillus vortex V453]
          Length = 489

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            L   G    +      FD   E AVK FQ ++ L   G++
Sbjct: 408 MLEAVGY--KTGRSDGYFDRNTEKAVKSFQSKNKLKADGII 446


>gi|297263898|ref|XP_002798895.1| PREDICTED: matrix metalloproteinase-17-like [Macaca mulatta]
          Length = 845

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 113 RLRERLIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
            L+E L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P  
Sbjct: 291 LLKEWLSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMRTPRC 350

Query: 171 LRIRQLQVNLMRIKKLLEQK 190
                  +   R ++     
Sbjct: 351 SLPDLPVLTQARRRRQAPAP 370


>gi|255318424|ref|ZP_05359657.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82]
 gi|262378654|ref|ZP_06071811.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|255304416|gb|EET83600.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82]
 gi|262299939|gb|EEY87851.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 418

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 25/100 (25%)

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I   S+ +  +H TP P L +      +
Sbjct: 335 WYSYSPSNFVQGNNKKPLSLPPGPNGPVGNIWIGL-SKKSFGIHGTPNPSLISKTA---S 390

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    + + V++  T   
Sbjct: 391 HGCIRLTN--------------WDANDLGKKVRSGVTVKF 416



 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAM 165
            A+  FQ  +GL P+G++   T +A+
Sbjct: 169 KAIASFQQMNGLKPTGVLTKETWDAL 194


>gi|229197343|ref|ZP_04324072.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus m1293]
 gi|228586151|gb|EEK44240.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus m1293]
          Length = 488

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ L + V+ G+
Sbjct: 361 GDTYAEVSIADQQIWIYKDGKLVLTTNVVTGK 392


>gi|222109277|ref|YP_002551541.1| peptidoglycan-binding domain 1 protein [Acidovorax ebreus TPSY]
 gi|221728721|gb|ACM31541.1| Peptidoglycan-binding domain 1 protein [Acidovorax ebreus TPSY]
          Length = 346

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ERL   G    +   S         A++ FQ   GL  +G +DS+T  A+
Sbjct: 297 ERLNAMGYNVGTPDGSAG--PKTARALREFQQAQGLPVTGRLDSATAGAL 344


>gi|160892800|ref|ZP_02073590.1| hypothetical protein CLOL250_00331 [Clostridium sp. L2-50]
 gi|156865841|gb|EDO59272.1| hypothetical protein CLOL250_00331 [Clostridium sp. L2-50]
          Length = 413

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G +   V++L+E+L  I+ +    P+      +      AV+ FQ    L  +
Sbjct: 329 PGYDLSIGATGDKVRQLQEQLNRIAQNYPSIPTVAADGIYGPATADAVRRFQQIFDLPVT 388

Query: 155 GMVDSSTLE 163
           G+ D ST  
Sbjct: 389 GITDYSTWY 397


>gi|150018544|ref|YP_001310798.1| hypothetical protein Cbei_3725 [Clostridium beijerinckii NCIMB
           8052]
 gi|149905009|gb|ABR35842.1| Domain of unknown function DUF1906 [Clostridium beijerinckii NCIMB
           8052]
          Length = 714

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 102 LHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L LG++    +  L+  L  +G      G    +   V++AV  FQ   GL+  G+  S 
Sbjct: 230 LSLGSTKTKFIYLLQFALYCNGKEFDPNGFDGGYGNGVKNAVTKFQSFCGLNADGIAGSQ 289

Query: 161 TLEAMNVPVDLRIRQ 175
           T  ++ V      R+
Sbjct: 290 TFASLLVSTGDNTRK 304


>gi|294625916|ref|ZP_06704529.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292599768|gb|EFF43892.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
          Length = 335

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             G  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N   + 
Sbjct: 272 PAGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWDVVA 320


>gi|256847539|ref|ZP_05552985.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256716203|gb|EEU31178.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 460

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR--QTP 229
              +G  Y  V+I        ++GK    + V+ G+      TP
Sbjct: 329 NHGLGNTYAEVSIADQHAWFYKDGKEVFSADVVTGKQSSGDATP 372


>gi|297744706|emb|CBI37968.3| unnamed protein product [Vitis vinifera]
          Length = 131

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLD 152
             G+    +Q++++ L   G L     S+  +  FD  +ESA+K+FQ  + L+
Sbjct: 20  KKGDKMEGIQKVKQYLQRYGYLSSTHYSQTNTDEFDDALESAIKVFQTFYHLN 72


>gi|147768132|emb|CAN60605.1| hypothetical protein VITISV_020064 [Vitis vinifera]
          Length = 149

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLD 152
             G+    +Q++++ L   G L     S+  +  FD  +ESA+K+FQ  + L+
Sbjct: 38  KKGDKMEGIQKVKQYLQRYGYLSSTHYSQTNTDEFDDALESAIKVFQTFYHLN 90


>gi|116873286|ref|YP_850067.1| carboxy-terminal processing protease [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116742164|emb|CAK21288.1| carboxy-terminal processing protease [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 496

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLRALDY--NVGKVDGLYDTDTEYAVQRFQSANKLDVTGIM 465

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 466 TGVTTDKL 473


>gi|927023|gb|AAA99948.1| senescence-specific protein [Cucumis sativus]
          Length = 126

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 6/57 (10%)

Query: 103 HLGNSSVSVQRLRERLIISGDL------DPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           HLG++   + ++++ L   G +        +      FD  +ESA+K +Q  H L  
Sbjct: 55  HLGDTKQGIHQIKKYLQRFGYITTNIQKHSNPIFDDTFDHILESALKTYQTNHNLAA 111


>gi|170746489|ref|YP_001752749.1| lytic murein transglycosylase [Methylobacterium radiotolerans JCM
           2831]
 gi|170653011|gb|ACB22066.1| lytic murein transglycosylase [Methylobacterium radiotolerans JCM
           2831]
          Length = 396

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              ++ L+  L  +G  D            +  AV+ +Q+  GL   G    + L+ +  
Sbjct: 333 GPGLRALQTGLAAAGFYDGPTDGRAG--PKLREAVRRYQISAGLPADGYATPALLDRVTG 390

Query: 168 PVDLR 172
               R
Sbjct: 391 KAAPR 395


>gi|317132365|ref|YP_004091679.1| ErfK/YbiS/YcfS/YnhG family protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315470344|gb|ADU26948.1| ErfK/YbiS/YcfS/YnhG family protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 235

 Score = 39.8 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA-YVESAVKLFQMRHGLDPSGMVD 158
           R +  G     V  +++RL   G  D     +  +D+     AV  F+   GL PS  + 
Sbjct: 165 RTIGPGMYGQDVLAVQKRLHDLGYFDG--ICNGRYDSWGFHQAVLRFEKDRGLPPSDRIA 222

Query: 159 SSTLEAM 165
           S+  +A+
Sbjct: 223 SAFYKAL 229


>gi|213625068|gb|AAI69744.1| MT3-MMP protein [Xenopus laevis]
          Length = 608

 Score = 39.8 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P+            ++SA+   Q  +G++ +G +D +T++ M  P
Sbjct: 46  LQKYGYLPPTDPRMSVLRSSETMQSAIAAMQQFYGINVTGKIDKNTIDWMKKP 98


>gi|160700680|ref|YP_001552360.1| gp31 [Mycobacterium phage Giles]
 gi|159136630|gb|ABW88426.1| gp31 [Mycobacterium phage Giles]
          Length = 402

 Score = 39.8 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH G S  +V +L+  L           +   F  + E+ V+  Q  +GLD  G+V   T
Sbjct: 338 LHRGMSGPNVVKLQTTLRRW---YSKLAVDGDFGPHTEACVRDRQRIYGLDVDGIVGPLT 394

Query: 162 LE 163
             
Sbjct: 395 AA 396


>gi|332711185|ref|ZP_08431118.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332349999|gb|EGJ29606.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 114

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 11/73 (15%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG---------LD 152
           L  G +  +V+ L++ LI    +D S  L   F +  E AV+ FQ  +          L 
Sbjct: 39  LKKGTAGEAVRFLQQFLIC--YIDYSVLLDGQFGSQTERAVRDFQSYYNSLQKSNPDYLI 96

Query: 153 PSGMVDSSTLEAM 165
             G+V   T  A+
Sbjct: 97  VDGIVGKETYRAI 109


>gi|294665945|ref|ZP_06731210.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|292604300|gb|EFF47686.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 335

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             G  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N   + 
Sbjct: 272 PAGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWDVVA 320


>gi|77748712|ref|NP_643674.2| hypothetical protein XAC3367 [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 328

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             G  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N   + 
Sbjct: 265 PAGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWDVVA 313


>gi|315646088|ref|ZP_07899208.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453]
 gi|315278287|gb|EFU41603.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453]
          Length = 112

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 47/168 (27%), Gaps = 68/168 (40%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           M    ++V++    L  ++   V     + VG++  QTP                     
Sbjct: 1   MPKYRIIVDVGNYQLHLLDGDAVVHTYPIAVGKMATQTP--------------------- 39

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
                       P      N  ++ ++          W     P++              
Sbjct: 40  ------------PG-----NYTIVTKEPNPGGPFGAYWLGLSKPHYG------------- 69

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
                       +H T +P    ++ R  + GC+R+   +++ L   +
Sbjct: 70  ------------IHGTNDPS---SIGRSVSHGCIRMYNEDVVQLASLV 102


>gi|311068995|ref|YP_003973918.1| hypothetical protein BATR1942_10280 [Bacillus atrophaeus 1942]
 gi|310869512|gb|ADP32987.1| hypothetical protein BATR1942_10280 [Bacillus atrophaeus 1942]
          Length = 176

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 60/209 (28%), Gaps = 68/209 (32%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
            G  YV++N  +  L  + + +V     V  G+ D  TP     I     NP        
Sbjct: 24  PGDPYVIINKASNQLAYIVDNQVEGIYQVATGKTDDLTPEGEFSITVKAANP-------- 75

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
                         Y +  NI      G         W   +          G       
Sbjct: 76  --------------YYRKKNIE----GGAPENPLGARWIGFDAE--------GTD---GR 106

Query: 311 TKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN----------IIDLDVWLLKD 359
                      Y +H T    L      F ++GC+R+ N           +   V + KD
Sbjct: 107 ----------IYGIHGTNRDELIGE---FVSNGCIRMHNQEVIHLFDSIPLGTKVLITKD 153

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
           + ++    IE    T+K        +VPV
Sbjct: 154 SRSFEDIAIEHKALTKK-------QDVPV 175


>gi|296136686|ref|YP_003643928.1| Peptidoglycan-binding domain 1 protein [Thiomonas intermedia K12]
 gi|295796808|gb|ADG31598.1| Peptidoglycan-binding domain 1 protein [Thiomonas intermedia K12]
          Length = 343

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           +GG      +P+    ++ +   L++   +L   G   P             + +K FQ 
Sbjct: 267 QGG-STPAAQPVAATQTAPATMTLKQAQEKLNAQGF--PVGTPDGVMGPRTRAELKRFQN 323

Query: 148 RHGLDPSGMVDSSTLEAMN 166
             GL  SG++D +T+ A N
Sbjct: 324 SRGLPESGVLDQATIAAFN 342


>gi|255018611|ref|ZP_05290737.1| hypothetical protein LmonF_14491 [Listeria monocytogenes FSL
           F2-515]
          Length = 237

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 149 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQTANKLDVTGIM 206

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 207 TGVTTDKL 214


>gi|224500081|ref|ZP_03668430.1| hypothetical protein LmonF1_10539 [Listeria monocytogenes Finland
           1988]
          Length = 496

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQTANKLDVTGIM 465

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 466 TGVTTDKL 473


>gi|16803891|ref|NP_465376.1| hypothetical protein lmo1851 [Listeria monocytogenes EGD-e]
 gi|224501349|ref|ZP_03669656.1| hypothetical protein LmonFR_02300 [Listeria monocytogenes FSL
           R2-561]
 gi|254829153|ref|ZP_05233840.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254831548|ref|ZP_05236203.1| hypothetical protein Lmon1_09343 [Listeria monocytogenes 10403S]
 gi|254899452|ref|ZP_05259376.1| hypothetical protein LmonJ_06549 [Listeria monocytogenes J0161]
 gi|254912409|ref|ZP_05262421.1| carboxyl-terminal protease [Listeria monocytogenes J2818]
 gi|254936736|ref|ZP_05268433.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|255025442|ref|ZP_05297428.1| hypothetical protein LmonocytFSL_02284 [Listeria monocytogenes FSL
           J2-003]
 gi|16411305|emb|CAC99929.1| lmo1851 [Listeria monocytogenes EGD-e]
 gi|258601563|gb|EEW14888.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258609333|gb|EEW21941.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293590391|gb|EFF98725.1| carboxyl-terminal protease [Listeria monocytogenes J2818]
          Length = 496

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQTANKLDVTGIM 465

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 466 TGVTTDKL 473


>gi|332019904|gb|EGI60365.1| Matrix metalloproteinase-14 [Acromyrmex echinatior]
          Length = 513

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 13/80 (16%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP------- 168
           L   G L P    + AF  +A + +A++ FQ   GL+ +G ++  T + M  P       
Sbjct: 46  LAQYGYLPPINPENGAFLSEAKLTAAIEEFQAFAGLNITGELNEETAKLMATPRCGVKDK 105

Query: 169 ----VDLRIRQLQVNLMRIK 184
                D R ++  +   R +
Sbjct: 106 VGPAADGRSKRYALQGSRWR 125


>gi|310825691|ref|YP_003958048.1| muramoyl-pentapeptide carboxypeptidase [Eubacterium limosum
           KIST612]
 gi|308737425|gb|ADO35085.1| muramoyl-pentapeptide carboxypeptidase [Eubacterium limosum
           KIST612]
          Length = 244

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 127 SKGLSVAFD-AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           + G    +D    ++AV+  Q  + ++  G+    T E +     +R  Q Q+N 
Sbjct: 18  APGTVDGYDGPETQAAVRRTQEGYDIEADGIAGPVTKEHL--SKQVRGIQAQLNA 70



 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 9/95 (9%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
             ET A   +    Y DI + G        P+   + S  V+ ++ +L   G   P  GL
Sbjct: 27  GPETQAAVRRTQEGY-DIEADG-----IAGPVTKEHLSKQVRGIQAQLNAKGCGCPVDGL 80

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                   ++AVK  Q   GL   G+V  +T  A+
Sbjct: 81  PG---PLTDAAVKTLQADFGLVADGIVGYNTEAAL 112


>gi|47214887|emb|CAG01018.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 256

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           GD D  +G S AF     SA++ FQ   GL  +G  D +T EAMN P
Sbjct: 3   GDGDDPEGASQAF----ISALEEFQRVSGLPVTGQFDEATKEAMNKP 45


>gi|313885622|ref|ZP_07819372.1| ErfK/YbiS/YcfS/YnhG [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619352|gb|EFR30791.1| ErfK/YbiS/YcfS/YnhG [Eremococcus coleocola ACS-139-V-Col8]
          Length = 458

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 33/83 (39%), Gaps = 14/83 (16%)

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLE-------------QKMGLRYVLVNIPAASL 205
             TL   ++  +    QL  +L   K +                 +G  YV +++   ++
Sbjct: 287 PGTLGW-SIDSESEAAQLAADLEAGKDVSREPAIVGTGYGSTGDDIGSTYVEIDMANQTM 345

Query: 206 EAVENGKVGLRSTVIVGRVDRQT 228
              ++G++ L + ++ GRV   T
Sbjct: 346 FIYKDGQIVLETPIVTGRVGTDT 368


>gi|326203788|ref|ZP_08193650.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Clostridium papyrosolvens DSM 2782]
 gi|325985886|gb|EGD46720.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Clostridium papyrosolvens DSM 2782]
          Length = 232

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 10/20 (50%)

Query: 142 VKLFQMRHGLDPSGMVDSST 161
           VK FQ   GL   G++   T
Sbjct: 151 VKEFQSMTGLTADGVIGPKT 170


>gi|227872274|ref|ZP_03990633.1| ErfK family protein [Oribacterium sinus F0268]
 gi|227841886|gb|EEJ52157.1| ErfK family protein [Oribacterium sinus F0268]
          Length = 438

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ--TP 229
              +G  YV V+I    +  VENG++ L S  + G V R   TP
Sbjct: 312 ASDLGNTYVEVDIAKQKMFYVENGEIKLSSDCVTGNVSRNNGTP 355


>gi|255524547|ref|ZP_05391501.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296185805|ref|ZP_06854212.1| hypothetical protein CLCAR_1244 [Clostridium carboxidivorans P7]
 gi|255511700|gb|EET87986.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296049633|gb|EFG89060.1| hypothetical protein CLCAR_1244 [Clostridium carboxidivorans P7]
          Length = 466

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
           E ++G  YV VNI    L   +NG++     ++ G  +R
Sbjct: 337 EDEIGKTYVEVNITRQHLWFYKNGRLISEGDIVTGDPNR 375


>gi|240849841|ref|YP_002971229.1| membrane-bound lytic murein transglycosylase [Bartonella grahamii
           as4aup]
 gi|240266964|gb|ACS50552.1| membrane-bound lytic murein transglycosylase [Bartonella grahamii
           as4aup]
          Length = 418

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           + L+ RL   G    +    +   +    A+K FQ+RHGL  +G
Sbjct: 364 KELQSRLSALGYYKGNVDGKIGTASR--KAIKAFQLRHGLKANG 405


>gi|255527321|ref|ZP_05394199.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296184916|ref|ZP_06853327.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7]
 gi|255508968|gb|EET85330.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296050698|gb|EFG90121.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7]
          Length = 233

 Score = 39.8 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           +R L  G +   V +L+  L   G  +     +  ++ Y +S V  FQ  + L 
Sbjct: 163 LRTLKPGMTGSDVYQLQFMLRTKGYYNSKP--NGIYNDYFKSVVHKFQKDNSLP 214


>gi|153810701|ref|ZP_01963369.1| hypothetical protein RUMOBE_01085 [Ruminococcus obeum ATCC 29174]
 gi|149833097|gb|EDM88179.1| hypothetical protein RUMOBE_01085 [Ruminococcus obeum ATCC 29174]
          Length = 501

 Score = 39.8 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY----VESAVKLFQMRHGLD 152
             +  +  G+    V+ L +RL+ S       G ++  D         A+K +Q + GL 
Sbjct: 427 FSVGNVQNGSKGNDVKLL-QRLLKSNGFKGKDGKNLTIDGECGTNTVYAIKTYQTKKGLS 485

Query: 153 PSGMVDSSTLEAM 165
             G    +T +++
Sbjct: 486 VDGCAGPATWKSI 498


>gi|21109718|gb|AAM38210.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 215

 Score = 39.8 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             G  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N   + 
Sbjct: 152 PAGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWDVVA 200


>gi|327393217|dbj|BAK10639.1| protein YbiS precursor [Pantoea ananatis AJ13355]
          Length = 380

 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 50/187 (26%), Gaps = 44/187 (23%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFN 241
           ++LL        +++N     L     G K  +   + +G + + TP+   + + R    
Sbjct: 89  QQLLLPDAPREGIVINSAEMRLYYYPKGTKTVVVLPIGIGELGKDTPLNWTTTVQRKKDG 148

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W                   +Y                             N      
Sbjct: 149 PTWT-----------PTKAMHAEYASR------------------------GENLPAVFP 173

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
            G  N M    +          H T     F   +R  + GCVR+    D+  WL    P
Sbjct: 174 AGPDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRL-RADDI-KWLFDHVP 226

Query: 362 TWSRYHI 368
             +R   
Sbjct: 227 VGTRVQF 233


>gi|291616791|ref|YP_003519533.1| YbiS [Pantoea ananatis LMG 20103]
 gi|291151821|gb|ADD76405.1| YbiS [Pantoea ananatis LMG 20103]
          Length = 380

 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 50/187 (26%), Gaps = 44/187 (23%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFN 241
           ++LL        +++N     L     G K  +   + +G + + TP+   + + R    
Sbjct: 89  QQLLLPDAPREGIVINSAEMRLYYYPKGTKTVVVLPIGIGELGKDTPLNWTTTVQRKKDG 148

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W                   +Y                             N      
Sbjct: 149 PTWT-----------PTKAMHAEYASR------------------------GENLPAVFP 173

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
            G  N M    +          H T     F   +R  + GCVR+    D+  WL    P
Sbjct: 174 AGPDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRL-RADDI-KWLFDHVP 226

Query: 362 TWSRYHI 368
             +R   
Sbjct: 227 VGTRVQF 233


>gi|303290915|ref|XP_003064744.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226453770|gb|EEH51078.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 130

 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 85  YQDILSRGG-WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF-DAYVESAV 142
           Y  I   G  WP      L L +  + V +L+  L   G     + +   +  +  E+A+
Sbjct: 4   YPQIAGEGKRWPV-----LRLDDGGLEVHKLQVLLDDLGYYSGEEDMQYWYFGSTTENAL 58

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
             FQ   GL  +G+   +T  A+
Sbjct: 59  GTFQASTGLPDTGLTCVNTWRAL 81


>gi|222151317|ref|YP_002560473.1| hypothetical protein MCCL_1070 [Macrococcus caseolyticus JCSC5402]
 gi|222120442|dbj|BAH17777.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 469

 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV-DSS 160
           L L   S  V+ +   L   G       +   FD     AV+ FQM + L   G++   +
Sbjct: 383 LTLNVKSTKVKSMEMGLKALGF--DPGKVDNTFDESTLYAVQSFQMENNLTVDGIMTGKT 440

Query: 161 TLEAM 165
           T + M
Sbjct: 441 TDKFM 445


>gi|210615974|ref|ZP_03290874.1| hypothetical protein CLONEX_03093 [Clostridium nexile DSM 1787]
 gi|210149979|gb|EEA80988.1| hypothetical protein CLONEX_03093 [Clostridium nexile DSM 1787]
          Length = 421

 Score = 39.8 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++++E+L +I+G     P   +   +     ++V+ FQ   GL  +
Sbjct: 337 PGYTLSNGSSGDKVRQMQEQLNVIAGAYPAIPKVAVDGIYGPATAASVRKFQSVFGLPET 396

Query: 155 GMVDSSTLE 163
           G VD  T  
Sbjct: 397 GTVDYRTWY 405


>gi|297458750|ref|XP_616761.4| PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos
           taurus]
          Length = 568

 Score = 39.4 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    S A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 8   LKSYGYLLPYDSRSSALHSGKALQSAVATMQQFYGIPVTGVLDQTTIEWMKKP 60


>gi|291237328|ref|XP_002738587.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
           preproprotein-like [Saccoglossus kowalevskii]
          Length = 525

 Score = 39.4 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L   K      D    +AV+ FQ    L+ +G +D  T+  M  P
Sbjct: 48  LEKFGYLKKLKEGVQHDDKSTNAAVRAFQRMANLEETGNMDEKTIAMMQAP 98


>gi|254420236|ref|ZP_05033960.1| N-acetylmuramoyl-L-alanine amidase domain protein [Brevundimonas
           sp. BAL3]
 gi|196186413|gb|EDX81389.1| N-acetylmuramoyl-L-alanine amidase domain protein [Brevundimonas
           sp. BAL3]
          Length = 253

 Score = 39.4 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 6/66 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDS 159
           L  G+  +    LR  L   G  L P       +DA  E+ V+ FQ     D   G+ D 
Sbjct: 175 LQKGDQGIGAVVLRAGLHRLGYGLTPGGD----YDAETETTVRAFQRHWRPDRIDGVADG 230

Query: 160 STLEAM 165
            T   +
Sbjct: 231 ETRARL 236


>gi|325263845|ref|ZP_08130578.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Clostridium sp. D5]
 gi|324030883|gb|EGB92165.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Clostridium sp. D5]
          Length = 529

 Score = 39.4 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTP 229
               G  Y  V++ A  +  + NG V L + V+ G    +++TP
Sbjct: 394 PADWGNTYAEVDLSAQHMWYIVNGAVALETDVVTGLPTPEKETP 437


>gi|17546650|ref|NP_520052.1| phage-related protein (hydrolase) [Ralstonia solanacearum GMI1000]
 gi|17428949|emb|CAD15633.1| putative phage-related protein (hydrolase) [Ralstonia solanacearum
           GMI1000]
          Length = 268

 Score = 39.4 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V+ L+  L   G    S   +  +DA   +AV+  Q    L   G+    T
Sbjct: 4   LKPGSTGAEVRELQRLLAGRGF---SAADTGEYDAATAAAVRAAQACFDLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
           ++A+ V           +L R
Sbjct: 61  VQALRVGARQPGHLTAADLQR 81


>gi|27375875|ref|NP_767404.1| hypothetical protein bll0764 [Bradyrhizobium japonicum USDA 110]
 gi|27349013|dbj|BAC46029.1| bll0764 [Bradyrhizobium japonicum USDA 110]
          Length = 468

 Score = 39.4 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 6/88 (6%)

Query: 95  PELPIRP--LHLGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
             +PIRP  L   + +       ERL +  DL      +  ++      + +A+K +Q  
Sbjct: 50  QTVPIRPPALQTPSETADAMAQAERLSLQSDLAWVGQYNGAITGEVSERMVNAIKEYQKN 109

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
            G  P+G+++     A+      +   +
Sbjct: 110 KGGKPTGVLNPQERAALAETARRKQDSV 137


>gi|325130145|gb|EGC52924.1| hypothetical protein NMBOX9930304_1068 [Neisseria meningitidis
           OX99.30304]
 gi|325202202|gb|ADY97656.1| conserved hypothetical protein [Neisseria meningitidis M01-240149]
 gi|325208044|gb|ADZ03496.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
          Length = 167

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 126 PSKGLSVAFDAYVE----SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           P       FDA V     +AV++ Q   G+   G++   +L+A+N   +  +  L+ N  
Sbjct: 74  PEAVAFQFFDACVNHGYGNAVRMLQRAAGVADDGIIGEISLKAINSLPENDL-LLRFNAE 132

Query: 182 RI 183
           R+
Sbjct: 133 RL 134


>gi|301762074|ref|XP_002916480.1| PREDICTED: matrix metalloproteinase-24-like [Ailuropoda
           melanoleuca]
          Length = 630

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           RL   L   G L PS   + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 65  RLANWLKSYGYLLPSDSRAPALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 122


>gi|254465328|ref|ZP_05078739.1| lytic murein transglycosylase [Rhodobacterales bacterium Y4I]
 gi|206686236|gb|EDZ46718.1| lytic murein transglycosylase [Rhodobacterales bacterium Y4I]
          Length = 443

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           RG WP    R L         + L++RL  +G    ++G+          AV+ +Q+ +G
Sbjct: 375 RGDWPR-SDRALTRSER----EELQQRLTAAGF--DTEGVDGRIGPKTIGAVRAYQVANG 427

Query: 151 LDPSGMVDSSTLEAM 165
           L   G      L+ +
Sbjct: 428 LTADGYASPRLLQRL 442


>gi|197105879|ref|YP_002131256.1| hypothetical protein PHZ_c2418 [Phenylobacterium zucineum HLK1]
 gi|196479299|gb|ACG78827.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 213

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           VQR++  LII G  DP         +  + A++ FQ   GL  +G +D  TL A+ V
Sbjct: 157 VQRVQIALIIKGY-DPGPANG-VLSSKTKEALRAFQAATGLTATGAMDMDTLNALGV 211


>gi|145708088|ref|YP_001165263.1| hypothetical protein RPRSA1_gp14 [Ralstonia phage phiRSA1]
 gi|139003877|dbj|BAF52391.1| phage-related protein [Ralstonia phage phiRSA1]
          Length = 268

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V+ L+  L   G    S   +  +DA   +AV+  Q    L   G+    T
Sbjct: 4   LKPGSTGAEVRELQRLLAGRGF---SAADTGEYDAATAAAVRAAQACFDLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
           ++A+ V           +L R
Sbjct: 61  VQALRVGARQPGHLTAADLQR 81


>gi|110346929|ref|YP_665747.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1]
 gi|110283040|gb|ABG61100.1| ErfK/YbiS/YcfS/YnhG [Chelativorans sp. BNC1]
          Length = 184

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 56/170 (32%), Gaps = 42/170 (24%)

Query: 184 KKLLEQKMGLRY--VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           ++L++   G R   V+V+  +  L  V  G   +R  V +GR    T      I      
Sbjct: 26  RQLVDDPTGERPGTVVVDTRSYFLYLVRPGGKAMRYGVGLGRQGF-TWSGDGVIQWKQRW 84

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P      +M+A                          E   W++         Q 
Sbjct: 85  PKWTPPA-----EMIAR-----------------------QPELEKWSADNGG-----QP 111

Query: 302 PGKINAMA-STKIEFYS-RNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
           PG  N +       F +  +  Y +H TPE           +SGCVR+ N
Sbjct: 112 PGLNNPLGARALYIFQNGEDTLYRLHGTPEYWTIGK---AVSSGCVRLMN 158


>gi|119385237|ref|YP_916293.1| lytic murein transglycosylase [Paracoccus denitrificans PD1222]
 gi|119375004|gb|ABL70597.1| lytic murein transglycosylase [Paracoccus denitrificans PD1222]
          Length = 417

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 15/95 (15%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGN---SSVSVQRLRERLIISGDLDPSKGL 130
            +A   +AIA  + I  +G WP         G+   S+     ++  L+  G    + G+
Sbjct: 333 AVAYLGEAIAGRRGI--QGNWPR--------GDRTLSNNEKAEIQRLLMARGF--DTGGV 380

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                     A++ FQ   G+ P G  D+  L  +
Sbjct: 381 DGKLGGQSTEAIRAFQRSRGVTPDGYADTRLLAML 415


>gi|315925294|ref|ZP_07921506.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621415|gb|EFV01384.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 663

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            +   +    + V+ P  +L+A  NG+  L + VI GR    TP
Sbjct: 536 WMP--VSPTCICVDRPHQTLKAYVNGREILSTPVITGRPGMSTP 577


>gi|228993887|ref|ZP_04153790.1| Carboxyl-terminal protease [Bacillus pseudomycoides DSM 12442]
 gi|228765838|gb|EEM14489.1| Carboxyl-terminal protease [Bacillus pseudomycoides DSM 12442]
          Length = 494

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEMTGQLDK 462

Query: 160 STLEAMNVPVDLRIR------QLQVNL 180
            T EA+   +  +IR      QLQ  L
Sbjct: 463 KTAEAIQNKIIEKIRSGENDLQLQAAL 489


>gi|228999923|ref|ZP_04159495.1| Carboxyl-terminal protease [Bacillus mycoides Rock3-17]
 gi|229007476|ref|ZP_04165073.1| Carboxyl-terminal protease [Bacillus mycoides Rock1-4]
 gi|228753864|gb|EEM03305.1| Carboxyl-terminal protease [Bacillus mycoides Rock1-4]
 gi|228759865|gb|EEM08839.1| Carboxyl-terminal protease [Bacillus mycoides Rock3-17]
          Length = 494

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +   +     F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVPGREDG--YFSKETESALKAFQNANEMEMTGQLDK 462

Query: 160 STLEAMNVPVDLRIR------QLQVNL 180
            T EA+   +  +IR      QLQ  L
Sbjct: 463 KTAEAIQNKIIEKIRSGENDLQLQAAL 489


>gi|326677672|ref|XP_698601.5| PREDICTED: matrix metalloproteinase-17 [Danio rerio]
          Length = 588

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L PS  ++        +  A+K  Q   GL+ +G++D +TL  M  P
Sbjct: 41  LSKFGYLPPSDPVNGQLQTKEALTKAIKAMQRFGGLEETGVLDQATLGLMKTP 93


>gi|197303250|ref|ZP_03168291.1| hypothetical protein RUMLAC_01973 [Ruminococcus lactaris ATCC
           29176]
 gi|197297676|gb|EDY32235.1| hypothetical protein RUMLAC_01973 [Ruminococcus lactaris ATCC
           29176]
          Length = 421

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPS---KGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V +++E+L +  +  P+         +      AV+ FQ   GL  +
Sbjct: 337 PGYTLEQGASGEKVLQMQEQLRVISEAYPAIPKVEADGIYGPATAQAVEKFQSVFGLPVT 396

Query: 155 GMVDSSTLE 163
           G VD ST  
Sbjct: 397 GTVDYSTWY 405


>gi|160897406|ref|YP_001562988.1| hypothetical protein Daci_1963 [Delftia acidovorans SPH-1]
 gi|160362990|gb|ABX34603.1| protein of unknown function DUF847 [Delftia acidovorans SPH-1]
          Length = 168

 Score = 39.4 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 6/86 (6%)

Query: 119 IISGDLDPSKGLSVAFDAYVES----AVKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLR 172
           +   D+         FD  V +    AVK+ Q+  G+ P G V   TL A+N+  P    
Sbjct: 72  MRLDDVSSQVIARHLFDFGVNAGTGTAVKIAQVVAGVTPDGAVGPLTLAALNMADPELFS 131

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLV 198
            R     + R + ++ +       L+
Sbjct: 132 ARYTIAKMARYRDIVTRDRSQSKFLL 157


>gi|254670722|emb|CBA06915.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
          Length = 167

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 126 PSKGLSVAFDAYVE----SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           P       FDA V     +AV++ Q   G+   G++   +L+A+N   +  +  L+ N  
Sbjct: 74  PEAVAFQFFDACVNHGYGNAVRMLQRAAGVADDGIIGEISLKAINSLPENDL-LLRFNAE 132

Query: 182 RI 183
           R+
Sbjct: 133 RL 134


>gi|256389541|ref|YP_003111105.1| peptidoglycan-binding protein [Catenulispora acidiphila DSM 44928]
 gi|256355767|gb|ACU69264.1| Peptidoglycan-binding domain 1 protein [Catenulispora acidiphila
           DSM 44928]
          Length = 360

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 92  GGWPELPIRPL-----HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           G  P LP  PL     H GN+   V+RL++ L ++  L+ +   +  FD     AV  +Q
Sbjct: 277 GQVPNLPGGPLGGDKHHRGNNPADVKRLQQALAVA--LNTNLKATGQFDLDTFGAVVQYQ 334

Query: 147 MRHGLDPSGMVDSSTLEAM 165
               + P G+V+ +   A+
Sbjct: 335 GAMHMTPDGLVNGTVWAAL 353


>gi|161869922|ref|YP_001599091.1| hypothetical protein NMCC_0954 [Neisseria meningitidis 053442]
 gi|161595475|gb|ABX73135.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 167

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 126 PSKGLSVAFDAYVE----SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           P       FDA V     +AV++ Q   G+   G++   +L+A+N   +  +  L+ N  
Sbjct: 74  PEAVAFQFFDACVNHGYGNAVRMLQRAAGVADDGIIGEISLKAINSLPENDL-LLRFNAE 132

Query: 182 RI 183
           R+
Sbjct: 133 RL 134


>gi|302833708|ref|XP_002948417.1| hypothetical protein VOLCADRAFT_103883 [Volvox carteri f.
           nagariensis]
 gi|300266104|gb|EFJ50292.1| hypothetical protein VOLCADRAFT_103883 [Volvox carteri f.
           nagariensis]
          Length = 488

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAF-DAYVESAVKLFQMRHGLD 152
           P  P   L  G+  +  + RL   L   G       +   F      +AV  FQ    L 
Sbjct: 234 PTDPPPELVQGDDDIYWLSRLHTCLEQRGFFPGDDDMENWFFGEGTLAAVLSFQASERLP 293

Query: 153 PSGMVDSSTLEAM 165
            +G+VD  T  A+
Sbjct: 294 ETGVVDRPTWTAL 306


>gi|254787848|ref|YP_003075277.1| N-acetylmuramidase [Teredinibacter turnerae T7901]
 gi|237687399|gb|ACR14663.1| N-acetylmuramidase [Teredinibacter turnerae T7901]
          Length = 177

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 24/107 (22%)

Query: 83  AFYQDILSR-----GGWPELPIRPLHLG-----NSSVSVQRLRERLIISGDLDPSKGLSV 132
             Y+ I         GW  + +     G          +Q L   L      D  +G  +
Sbjct: 28  ETYKGIARNRNSKWQGWIAVDLLKKQRGFPANLEDDPQLQALVHELYELNYWDKIRGDDI 87

Query: 133 AFDAYVESAVKLF-------------QMRHGLDPSGMVDSSTLEAMN 166
             D  +  ++  F             Q+  G    G++   TLE +N
Sbjct: 88  V-DQDIADSIFDFAVNAGPATSSKLAQLAVGATADGVIGEKTLEKLN 133


>gi|197303997|ref|ZP_03169029.1| hypothetical protein RUMLAC_02734 [Ruminococcus lactaris ATCC
           29176]
 gi|197296965|gb|EDY31533.1| hypothetical protein RUMLAC_02734 [Ruminococcus lactaris ATCC
           29176]
          Length = 495

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPI 230
               G  Y  V++    +  V +G++ + + ++ G     RQTP 
Sbjct: 361 ASDWGTTYAEVDLTNQKMWYVRDGQILMSTDIVTGLPTRARQTPE 405


>gi|291005214|ref|ZP_06563187.1| hypothetical protein SeryN2_11892 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 131

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 6/75 (8%)

Query: 94  WPELPIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           W  LP       L  G++   V  L+  L     +         F    ++ V  FQ   
Sbjct: 38  WQALPSGSAMPVLQEGSTGGVVWDLQRTLNTL--IVAGLVQDGIFGPLTKAKVVQFQQIS 95

Query: 150 GLDPSGMVDSSTLEA 164
            + P G+V   T  A
Sbjct: 96  SIAPDGIVGDRTWRA 110


>gi|326669661|ref|XP_002662954.2| PREDICTED: matrix metalloproteinase-15-like [Danio rerio]
          Length = 655

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 7/94 (7%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  +        +   + +A+   Q  +GL+ +G +D  T+EAM  P     D 
Sbjct: 43  LRMYGYLPQASRQMSTMRSAQILSNAISDMQRFYGLEITGEMDPGTIEAMKRPRCGVPDK 102

Query: 172 RIRQLQVNLMRIKK-LLEQKMGLRYVLVNIPAAS 204
              Q++ N+ R +  L   K    ++  +I   +
Sbjct: 103 FGAQIKTNVRRKRYALTGHKWDKTHITFSIQNYT 136


>gi|293606325|ref|ZP_06688686.1| type III effector HopAJ2 [Achromobacter piechaudii ATCC 43553]
 gi|292815320|gb|EFF74440.1| type III effector HopAJ2 [Achromobacter piechaudii ATCC 43553]
          Length = 529

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 11/84 (13%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP         G S   +++L+E L   G D+  + G+     A    AV+  Q R  L 
Sbjct: 451 WPTDD-----PGLSRAEIKQLQEELYGRGYDVGEADGIPG---AKTRDAVRAEQERRNLP 502

Query: 153 PSGMVDSSTLEAM--NVPVDLRIR 174
             G V    L+A+  + P  LR R
Sbjct: 503 QDGRVGKRILDALKADKPDALRAR 526


>gi|285808350|gb|ADC35879.1| hypothetical protein [uncultured bacterium 246]
          Length = 97

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           ++   + ++  L   G           +DA   +A++ FQ  +G++ +G +DS +L  +N
Sbjct: 7   TAERYREIQSALAKEGYFQGPADG--VWDASSVAALQKFQQENGIEATGKIDSLSLIKLN 64

Query: 167 VPVD 170
           +   
Sbjct: 65  LGPK 68


>gi|260203261|ref|ZP_05770752.1| hypothetical protein MtubK8_02950 [Mycobacterium tuberculosis K85]
 gi|289572696|ref|ZP_06452923.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289537127|gb|EFD41705.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
          Length = 251

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 18/73 (24%)

Query: 176 LQVNLMRI---KKLLEQ--------------KMGLRYVLV-NIPAASLEAVENGKVGLRS 217
           +  N++R    +                   + G   + V +I A +     NG+V    
Sbjct: 89  VASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIRVASISAHTFTVSRNGEVLRTM 148

Query: 218 TVIVGRVDRQTPI 230
              +G+  R TPI
Sbjct: 149 PASLGKPSRPTPI 161


>gi|254473464|ref|ZP_05086861.1| ErfK/YbiS/YcfS/YnhG [Pseudovibrio sp. JE062]
 gi|211957580|gb|EEA92783.1| ErfK/YbiS/YcfS/YnhG [Pseudovibrio sp. JE062]
          Length = 226

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA-STKIEFYS-RNNTY-MHDTP 327
           I    +  K     E+    PE   F +   PG  N +       F + ++  Y +H T 
Sbjct: 119 IQYKRQWPKWTPPAEMIARQPELEEFRYGMAPGIENPLGARALYLFQNGKDTLYRLHGTN 178

Query: 328 EPILFNNVVRFETSGCVRV--RNIIDL 352
           E       V   +SGC+R+  +++IDL
Sbjct: 179 EHWSIGKNV---SSGCIRLLNQDVIDL 202


>gi|15839497|ref|NP_334534.1| hypothetical protein MT0125 [Mycobacterium tuberculosis CDC1551]
 gi|13879605|gb|AAK44348.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
          Length = 210

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 18/73 (24%)

Query: 176 LQVNLMRI---KKLLEQ--------------KMGLRYVLV-NIPAASLEAVENGKVGLRS 217
           +  N++R    +                   + G   + V +I A +     NG+V    
Sbjct: 48  VASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTM 107

Query: 218 TVIVGRVDRQTPI 230
              +G+  R TPI
Sbjct: 108 PASLGKPSRPTPI 120


>gi|84684354|ref|ZP_01012255.1| hypothetical protein 1099457000260_RB2654_12054 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667333|gb|EAQ13802.1| hypothetical protein RB2654_12054 [Rhodobacterales bacterium
           HTCC2654]
          Length = 548

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 10/103 (9%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           +++  L + G     KG+   F     +A++ +Q  +    +G +    L  M    D R
Sbjct: 299 QVQRNLALLG--HDPKGIDGIFGPATRAAIRSYQSANDFTVTGYLSRDMLARMTAQADDR 356

Query: 173 IRQLQV-NLMRIKKLLEQKMGLRYVLVNIP----AASLEAVEN 210
             QL+     R  +   Q+   R     I      A L A  +
Sbjct: 357 AEQLEREAAERQAR---QEREDRRYWEQIGQGRDEAGLRAYLD 396



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 116 ERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            RL+  G D+    G    F      A++ FQ   GL  +G V   T+  +
Sbjct: 497 NRLVSLGFDIPEVDG---VFGPTARRAIRRFQSSRGLPVTGFVTQETMVRL 544


>gi|328553819|gb|AEB24311.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens TA208]
 gi|328911326|gb|AEB62922.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens LL3]
          Length = 292

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               S   V +++  L            + G+   +     +AV  FQ  +GL   G+  
Sbjct: 222 EPYTSGEKVYQVQNALAALYFYPEKGAANNGIDGIYGPKTANAVARFQSVNGLPSDGIYG 281

Query: 159 SS 160
            +
Sbjct: 282 PA 283


>gi|269126016|ref|YP_003299386.1| peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
 gi|268310974|gb|ACY97348.1| Peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
          Length = 366

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   F +   SAV  +Q   GL   G+V  +T + M
Sbjct: 280 SIDCMFGSQTASAVASWQAARGLAADGIVGPNTRDRM 316


>gi|145351115|ref|XP_001419931.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580164|gb|ABO98224.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 319

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 10/83 (12%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  L +RL   G    ++      D     A++ +Q+  GL PSG   +S+   
Sbjct: 12  GDSGTDVS-LAQRL--LG--RDARRAHGVCDRETTEALRAWQISRGLKPSGFFGASSRAQ 66

Query: 165 MNVPVDLRIRQL---QVNLMRIK 184
           M +  + R R+L    + L R+ 
Sbjct: 67  MAME-EERWRELGGGAL-LERLW 87


>gi|134103030|ref|YP_001108691.1| hypothetical protein SACE_6599 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133915653|emb|CAM05766.1| hypothetical protein SACE_6599 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 135

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 6/75 (8%)

Query: 94  WPELPIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           W  LP       L  G++   V  L+  L     +         F    ++ V  FQ   
Sbjct: 42  WQALPSGSAMPVLQEGSTGGVVWDLQRTLNTL--IVAGLVQDGIFGPLTKAKVVQFQQIS 99

Query: 150 GLDPSGMVDSSTLEA 164
            + P G+V   T  A
Sbjct: 100 SIAPDGIVGDRTWRA 114


>gi|313623229|gb|EFR93479.1| carboxypeptidase family protein [Listeria innocua FSL J1-023]
          Length = 468

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 380 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDIDTEYAVQRFQAANNLDVTGIM 437

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 438 TGVTTDKL 445


>gi|229829297|ref|ZP_04455366.1| hypothetical protein GCWU000342_01384 [Shuttleworthia satelles DSM
           14600]
 gi|229792460|gb|EEP28574.1| hypothetical protein GCWU000342_01384 [Shuttleworthia satelles DSM
           14600]
          Length = 553

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPI 230
             +G  YV VN+ A  L   ++GK  + + V  G+   + QT +
Sbjct: 340 DDIGSSYVEVNLTAQHLFVYKDGKKVVDTAVTTGKPVNNHQTNV 383


>gi|16801031|ref|NP_471299.1| hypothetical protein lin1965 [Listeria innocua Clip11262]
 gi|16414466|emb|CAC97195.1| lin1965 [Listeria innocua Clip11262]
 gi|313618251|gb|EFR90316.1| carboxy- processing protease [Listeria innocua FSL S4-378]
          Length = 496

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDIDTEYAVQRFQAANNLDVTGIM 465

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 466 TGVTTDKL 473


>gi|187778003|ref|ZP_02994476.1| hypothetical protein CLOSPO_01595 [Clostridium sporogenes ATCC
           15579]
 gi|187774931|gb|EDU38733.1| hypothetical protein CLOSPO_01595 [Clostridium sporogenes ATCC
           15579]
          Length = 125

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            +++N  A +L    N  V     V VG+    TP    +I     NP
Sbjct: 17  RIVINTKAHTLTLFRNNNVYKTYKVAVGKPSTPTPKGTFKIINRAINP 64


>gi|260549740|ref|ZP_05823957.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624]
 gi|260407257|gb|EEX00733.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624]
          Length = 418

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 11/79 (13%)

Query: 279 KEVFVEEVDWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
           K V V    W S  P NF            PG    + +  I   S+ +  +H TP P L
Sbjct: 326 KVVGVARNPWYSYSPSNFVQGKNLKPLSLPPGPNAPVGNIWIGL-SKKSFGIHGTPNPSL 384

Query: 332 FNNVVRFETSGCVRVRNII 350
            +      + GC+R+ N  
Sbjct: 385 ISKTA---SHGCIRLTNWD 400


>gi|260184973|ref|ZP_05762447.1| hypothetical protein MtubCP_02827 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289445646|ref|ZP_06435390.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
 gi|289418604|gb|EFD15805.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
          Length = 251

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 18/73 (24%)

Query: 176 LQVNLMRI---KKLLEQ--------------KMGLRYVLV-NIPAASLEAVENGKVGLRS 217
           +  N++R    +                   + G   + V +I A +     NG+V    
Sbjct: 89  VASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTM 148

Query: 218 TVIVGRVDRQTPI 230
              +G+  R TPI
Sbjct: 149 PASLGKPSRPTPI 161


>gi|302876662|ref|YP_003845295.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|307687337|ref|ZP_07629783.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|302579519|gb|ADL53531.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
          Length = 410

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL + +   +V+ ++  L    +   L P   ++  +D     AV+ FQ       +
Sbjct: 328 PGSPLTIEDKGSNVRIIQGHLNKISEAYPLIPKVTVNGIYDLATAEAVRKFQNTFKASET 387

Query: 155 GMVDSSTLEAM 165
           G+VD +T  ++
Sbjct: 388 GIVDFATWYSI 398


>gi|153853328|ref|ZP_01994737.1| hypothetical protein DORLON_00724 [Dorea longicatena DSM 13814]
 gi|149754114|gb|EDM64045.1| hypothetical protein DORLON_00724 [Dorea longicatena DSM 13814]
          Length = 543

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTP 229
           R        +G  Y  VN+    +  V++G + L + V+ G  +    TP
Sbjct: 404 RAASHDGNDVGNTYAEVNLTTQHMYYVKDGHIALETDVVTGNPNKGNATP 453


>gi|302671205|ref|YP_003831165.1| YkuD domain-containing protein [Butyrivibrio proteoclasticus B316]
 gi|302395678|gb|ADL34583.1| YkuD domain-containing protein [Butyrivibrio proteoclasticus B316]
          Length = 211

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 9/67 (13%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTP----ILHSRI--NRIM 239
            Q +   YV V+I   ++    +G   L S V+ G  +    TP     + S+I    ++
Sbjct: 86  SQDVPSTYVDVDIDNQTMNYYVDGVSVLSSAVVTGNTQNGNGTPRGVFFIDSKIPGKYLV 145

Query: 240 FNPYWVI 246
             P W +
Sbjct: 146 -GPTWNV 151


>gi|326203290|ref|ZP_08193155.1| carboxyl-terminal protease [Clostridium papyrosolvens DSM 2782]
 gi|325986548|gb|EGD47379.1| carboxyl-terminal protease [Clostridium papyrosolvens DSM 2782]
          Length = 488

 Score = 39.4 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           DA    AVK FQ  + L  SG++D +T   +N  ++   ++
Sbjct: 434 DAKSVEAVKKFQKSNKLSSSGILDFATQRLLNTKINEIKQK 474


>gi|307946258|ref|ZP_07661593.1| secretion activator protein [Roseibium sp. TrichSKD4]
 gi|307769922|gb|EFO29148.1| secretion activator protein [Roseibium sp. TrichSKD4]
          Length = 271

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRL-RERL--IISGDLDPSKGLSVAFDAYVES- 140
           Y     R G+ +  +R +    +   VQ + RE+    ++GD  PS      FD  V S 
Sbjct: 39  YNAYRRRMGFAKRSVRQI----TDAEVQAIYREQYWKAVAGDELPSGVDYAVFDYGVNSG 94

Query: 141 ---AVKLFQMRHGLDPSGMVDSSTLEAMN--VPVDLRIRQLQVNLM---RIKKLLEQKMG 192
              A+K  Q   G  P G + + TL A+    P ++  +  +       R++       G
Sbjct: 95  PRRAIKDLQRVVGAKPDGWIGAETLAAIQSMFPKEIVQKLCERRYQFVRRLRHWPTFGRG 154


>gi|125972839|ref|YP_001036749.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
 gi|256005881|ref|ZP_05430828.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           2360]
 gi|125713064|gb|ABN51556.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
 gi|255990150|gb|EEU00285.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           2360]
 gi|316940925|gb|ADU74959.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           1313]
          Length = 230

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P + L  G+    V ++++ L   G        S  F   ++ +V  FQ  + +  +G V
Sbjct: 148 PFKELKSGDVGSDVLKVQKALKKLGYFH--DWPSGKFQDNLKKSVIKFQKDNKIKVTGTV 205

Query: 158 DSS 160
           + S
Sbjct: 206 NKS 208


>gi|156349373|ref|XP_001622031.1| hypothetical protein NEMVEDRAFT_v1g142824 [Nematostella vectensis]
 gi|156208428|gb|EDO29931.1| predicted protein [Nematostella vectensis]
          Length = 216

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 24/40 (60%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             S + +  VE+A+K FQ   GL+ +G +D +T+  M +P
Sbjct: 5   SNSRSGNQDVETAIKNFQRFAGLEVTGELDDATIAQMKMP 44


>gi|150388024|ref|YP_001318073.1| carboxyl-terminal protease [Alkaliphilus metalliredigens QYMF]
 gi|149947886|gb|ABR46414.1| carboxyl-terminal protease [Alkaliphilus metalliredigens QYMF]
          Length = 467

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R   +G+    V+  ++RL   G     K            A+  FQ   GL P G++D
Sbjct: 370 TRKPQIGDEGSDVEGAQQRLKAMGY--TIKDPQGVMGESTYQAIYQFQEDAGLYPYGILD 427

Query: 159 SSTLEAM 165
            ST  A+
Sbjct: 428 FSTQGAL 434


>gi|152983342|ref|YP_001352705.1| hypothetical protein mma_1015 [Janthinobacterium sp. Marseille]
 gi|151283419|gb|ABR91829.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 199

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           +   + A+K FQM  GL  +G + +STL A+ +P 
Sbjct: 163 NEDTKIALKRFQMIKGLPETGTMGTSTLNALGLPA 197


>gi|157278503|ref|NP_001098353.1| membrane-type matrix metalloproteinase [Oryzias latipes]
 gi|46359589|dbj|BAD15297.1| membrane-type matrix metalloproteinase [Oryzias latipes]
          Length = 658

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  +        +   +  AV   Q  +GL  +G +D  T+ AM  P     D 
Sbjct: 43  LRMYGYLPQASRQMSTMRSSQILSDAVSDMQRFYGLQVTGQMDPQTISAMKRPRCGVPDK 102

Query: 172 RIRQLQVNLMRIK 184
              Q++ N+ R +
Sbjct: 103 FGGQIKTNVRRKR 115


>gi|194207129|ref|XP_001495153.2| PREDICTED: matrix metalloproteinase 14 [Equus caballus]
          Length = 756

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 8/99 (8%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRH 149
           G W     R    G  ++    L   L   G L P      +      + +A+   Q  +
Sbjct: 189 GPWRR-GSRRWRPGCGTLHKALLAW-LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFY 246

Query: 150 GLDPSGMVDSSTLEAMNVP----VDLRIRQLQVNLMRIK 184
           GL  +G  D+ T++AM  P     D    +++ N+ R +
Sbjct: 247 GLQVTGKADADTMKAMRRPRCGVPDKFGAEIKANVRRKR 285


>gi|311696248|gb|ADP99121.1| peptidoglycan binding domain protein [marine bacterium HP15]
          Length = 416

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            ++  L++ L   G    +            SA++ FQ  + L   G    S L A+ +P
Sbjct: 356 ANIINLQKALQQRGYEPGNPDG--IMGPATRSAIRQFQAANNLVADGYPGESVLAALEIP 413

Query: 169 VDL 171
              
Sbjct: 414 AGQ 416


>gi|307946200|ref|ZP_07661535.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307769864|gb|EFO29090.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 301

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 3/65 (4%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSSTLEAMNV 167
             +  L+  L   G    S  +          A++ FQ  H  L   G+   +T   +  
Sbjct: 172 DDIATLQTSLKQVGF--DSGSIDGVLGDRTRDAIRAFQRSHPPLVVDGIAGPATRTRLQR 229

Query: 168 PVDLR 172
            +  R
Sbjct: 230 QLAKR 234


>gi|224136290|ref|XP_002322292.1| predicted protein [Populus trichocarpa]
 gi|222869288|gb|EEF06419.1| predicted protein [Populus trichocarpa]
          Length = 376

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           H G     + +L+      G +  S    +  FD Y+ESA++ +Q    L+ +G +D  T
Sbjct: 62  HAGKKYDGLAKLKHYFQYFGYIPNSLSNFTDDFDDYLESALRTYQQNFNLNVTGELDDQT 121

Query: 162 LEAMNVP 168
           +  +  P
Sbjct: 122 VNHVVRP 128


>gi|192289092|ref|YP_001989697.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris TIE-1]
 gi|192282841|gb|ACE99221.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris TIE-1]
          Length = 464

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             V+ +++RL   G  +        F    E A+  F+  +GL P+  VD +TL A+
Sbjct: 298 PLVEFVQQRLRALGYYEVGNIDGD-FAGRTEDALVTFKRHNGLPPTTDVDDATLRAL 353


>gi|35903119|ref|NP_919397.1| matrix metalloproteinase-14 [Danio rerio]
 gi|32251076|gb|AAP74483.1| membrane-type matrix metalloproteinase 1 alpha [Danio rerio]
 gi|124297207|gb|AAI31865.1| Matrix metalloproteinase 14 (membrane-inserted) alpha [Danio rerio]
          Length = 574

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTL 162
           G S   V+     L   G L P    + A  +   + SA+   Q  +GL  +G +D +TL
Sbjct: 25  GTSDKEVRPEAW-LQQYGYLPPGDVRAQAIRSPKSINSAISAMQKFYGLTVTGTMDPATL 83

Query: 163 EAMNVP 168
            AM  P
Sbjct: 84  SAMQRP 89


>gi|308172494|ref|YP_003919199.1| hypothetical protein BAMF_0603 [Bacillus amyloliquefaciens DSM 7]
 gi|307605358|emb|CBI41729.1| Uncharacterized protein fadG [Bacillus amyloliquefaciens DSM 7]
 gi|328910596|gb|AEB62192.1| Uncharacterized protein fadG [Bacillus amyloliquefaciens LL3]
          Length = 761

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
            FD  + +A+  FQ    L   G+    T  ++ V      R+
Sbjct: 239 IFDENMRTALIDFQRFSALPADGVAGMQTWASLLVSKGDEDRK 281


>gi|213623846|gb|AAI70300.1| Matrix metalloproteinase 21 [Xenopus laevis]
 gi|213627655|gb|AAI70298.1| Matrix metalloproteinase 21 [Xenopus laevis]
          Length = 604

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRE-RLIISG 122
           SD+   + E     +  ++  Q  L++ GW + +   P    +S+   + L++  L+  G
Sbjct: 32  SDLQPSAIEQAELVKDMLSA-QQFLAKYGWTQPVIWDP----SSTNENEPLKDFSLMQEG 86

Query: 123 DLDP-SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +P  +            A+K FQ  + L  +G +D +T+ AMN P
Sbjct: 87  VSNPRQEVAEPTKSPQFIDALKKFQKLNNLPVTGTLDDATINAMNKP 133


>gi|15607258|ref|NP_214630.1| hypothetical protein Rv0116c [Mycobacterium tuberculosis H37Rv]
 gi|31791294|ref|NP_853787.1| hypothetical protein Mb0120c [Mycobacterium bovis AF2122/97]
 gi|121636029|ref|YP_976252.1| hypothetical protein BCG_0150c [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148659880|ref|YP_001281403.1| hypothetical protein MRA_0123 [Mycobacterium tuberculosis H37Ra]
 gi|148821308|ref|YP_001286062.1| hypothetical protein TBFG_10117 [Mycobacterium tuberculosis F11]
 gi|167967292|ref|ZP_02549569.1| hypothetical protein MtubH3_04342 [Mycobacterium tuberculosis
           H37Ra]
 gi|215406105|ref|ZP_03418286.1| hypothetical protein Mtub0_20941 [Mycobacterium tuberculosis
           02_1987]
 gi|215413974|ref|ZP_03422636.1| hypothetical protein Mtub9_21588 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425318|ref|ZP_03423237.1| hypothetical protein MtubT9_02601 [Mycobacterium tuberculosis T92]
 gi|215433034|ref|ZP_03430953.1| hypothetical protein MtubE_20814 [Mycobacterium tuberculosis
           EAS054]
 gi|215448393|ref|ZP_03435145.1| hypothetical protein MtubT_21523 [Mycobacterium tuberculosis T85]
 gi|218755845|ref|ZP_03534641.1| hypothetical protein MtubG1_21489 [Mycobacterium tuberculosis GM
           1503]
 gi|219555903|ref|ZP_03534979.1| hypothetical protein MtubT1_00825 [Mycobacterium tuberculosis T17]
 gi|224988502|ref|YP_002643189.1| hypothetical protein JTY_0120 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253797034|ref|YP_003030035.1| hypothetical protein TBMG_00117 [Mycobacterium tuberculosis KZN
           1435]
 gi|254233508|ref|ZP_04926834.1| hypothetical protein TBCG_00116 [Mycobacterium tuberculosis C]
 gi|254366570|ref|ZP_04982614.1| conserved membrane protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549051|ref|ZP_05139498.1| hypothetical protein Mtube_01066 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260199112|ref|ZP_05766603.1| hypothetical protein MtubT4_02950 [Mycobacterium tuberculosis T46]
 gi|289441485|ref|ZP_06431229.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289552367|ref|ZP_06441577.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289568010|ref|ZP_06448237.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289747883|ref|ZP_06507261.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289748589|ref|ZP_06507967.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289756178|ref|ZP_06515556.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289760216|ref|ZP_06519594.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289764233|ref|ZP_06523611.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503]
 gi|294992960|ref|ZP_06798651.1| hypothetical protein Mtub2_00255 [Mycobacterium tuberculosis 210]
 gi|297632590|ref|ZP_06950370.1| hypothetical protein MtubK4_00610 [Mycobacterium tuberculosis KZN
           4207]
 gi|297729564|ref|ZP_06958682.1| hypothetical protein MtubKR_00635 [Mycobacterium tuberculosis KZN
           R506]
 gi|298527508|ref|ZP_07014917.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306774201|ref|ZP_07412538.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|306778946|ref|ZP_07417283.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|306805907|ref|ZP_07442575.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|306970303|ref|ZP_07482964.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|306974536|ref|ZP_07487197.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|307082244|ref|ZP_07491414.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|307082588|ref|ZP_07491701.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|313656891|ref|ZP_07813771.1| hypothetical protein MtubKV_00625 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2909581|emb|CAA17310.1| POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium tuberculosis
           H37Rv]
 gi|31616879|emb|CAD92981.1| POSSIBLE CONSERVED MEMBRANE PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121491676|emb|CAL70134.1| Possible conserved membrane protein [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124603301|gb|EAY61576.1| hypothetical protein TBCG_00116 [Mycobacterium tuberculosis C]
 gi|134152082|gb|EBA44127.1| conserved membrane protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148504032|gb|ABQ71841.1| putative conserved membrane protein [Mycobacterium tuberculosis
           H37Ra]
 gi|148719835|gb|ABR04460.1| conserved membrane protein [Mycobacterium tuberculosis F11]
 gi|224771615|dbj|BAH24421.1| hypothetical protein JTY_0120 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253318537|gb|ACT23140.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
 gi|289414404|gb|EFD11644.1| conserved membrane protein [Mycobacterium tuberculosis T46]
 gi|289436999|gb|EFD19492.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
 gi|289541763|gb|EFD45412.1| conserved membrane protein [Mycobacterium tuberculosis T17]
 gi|289688411|gb|EFD55899.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289689176|gb|EFD56605.1| conserved membrane protein [Mycobacterium tuberculosis T92]
 gi|289696765|gb|EFD64194.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289711739|gb|EFD75755.1| conserved membrane protein [Mycobacterium tuberculosis GM 1503]
 gi|289715780|gb|EFD79792.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298497302|gb|EFI32596.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308217207|gb|EFO76606.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|308328067|gb|EFP16918.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|308347583|gb|EFP36434.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
 gi|308352208|gb|EFP41059.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
 gi|308356173|gb|EFP45024.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
 gi|308360113|gb|EFP48964.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
 gi|308367680|gb|EFP56531.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
 gi|323717255|gb|EGB26463.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
 gi|326905875|gb|EGE52808.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
 gi|328456823|gb|AEB02246.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
          Length = 251

 Score = 39.4 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 18/73 (24%)

Query: 176 LQVNLMRI---KKLLEQ--------------KMGLRYVLV-NIPAASLEAVENGKVGLRS 217
           +  N++R    +                   + G   + V +I A +     NG+V    
Sbjct: 89  VASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTM 148

Query: 218 TVIVGRVDRQTPI 230
              +G+  R TPI
Sbjct: 149 PASLGKPSRPTPI 161


>gi|306844341|ref|ZP_07476933.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. BO1]
 gi|306275413|gb|EFM57154.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. BO1]
          Length = 268

 Score = 39.4 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 7/73 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVD-- 158
           L  G     V+ L+  L + G       ++  FD   E  +K FQ         G+ D  
Sbjct: 195 LARGEQGQPVEALQSMLALYGY---EIAITGIFDEATEIVIKAFQRHFRPQNVDGVADVS 251

Query: 159 -SSTLEAMNVPVD 170
              TL  +N  + 
Sbjct: 252 TIDTLYRLNFSLQ 264


>gi|296131570|ref|YP_003638817.1| carboxyl-terminal protease [Thermincola sp. JR]
 gi|296030148|gb|ADG80916.1| carboxyl-terminal protease [Thermincola potens JR]
          Length = 494

 Score = 39.4 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           + LI+ G            DA   +A+K FQ   GL P G++D  T + +N
Sbjct: 423 KILILLGY--NLDKPDTNLDAKTFAAIKKFQKDKGLYPYGVLDFITQQKLN 471


>gi|282892390|ref|ZP_06300740.1| hypothetical protein pah_c253o003 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497792|gb|EFB40153.1| hypothetical protein pah_c253o003 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 385

 Score = 39.4 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 78/231 (33%), Gaps = 28/231 (12%)

Query: 8   NKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDI 67
           N   +   +      G+SLV     A   D  I      I +D      +R+   + S  
Sbjct: 60  NDW-HLVHLGSRAAGGVSLVVVEATAVTRDGRITPFDMGIWSDDHIGPHSRLVEFVQSQG 118

Query: 68  PIISKETIAQTEKAIAFY-------QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
            + + +      KA              +  GGW  +   P+   ++    +     L  
Sbjct: 119 AVPAIQLAHAGRKASCDVPWRGGACLKTVQEGGWTTVAPSPIPFLDTDPRPEE----LNE 174

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQ--MRHG------LDPSGMVDSSTLEAMNVPVDLR 172
            G  +  K    A    +++  KL +    HG      L P  + +  T +     ++ R
Sbjct: 175 EGIYEMIKAFENACKRALKAGYKLIEIHSAHGYLLHQFLSP--ISNQRT-DQYGGSLENR 231

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           +R L     R++ ++   +    + V I     + VE G    +S V+ G+
Sbjct: 232 MRLLLQVAERLRGIIPDDLP---LFVRISG--TDWVEGGWDIQQSVVLAGK 277


>gi|260769526|ref|ZP_05878459.1| VgrG protein [Vibrio furnissii CIP 102972]
 gi|260614864|gb|EEX40050.1| VgrG protein [Vibrio furnissii CIP 102972]
          Length = 1073

 Score = 39.4 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 13/74 (17%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH----------- 149
               G+    V+ +++ LI  G    + G   +F +  E  VK+FQ  +           
Sbjct: 747 SYKTGSKGQEVELIQKALIKLGFDLGTYGADGSFGSTTERQVKMFQQSYTPSHSTHPDYK 806

Query: 150 -GLDPSGMVDSSTL 162
            G    G+V   TL
Sbjct: 807 VG-KADGIVGQGTL 819


>gi|308370318|ref|ZP_07421055.2| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|308371591|ref|ZP_07425423.2| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308372809|ref|ZP_07429960.2| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|308374629|ref|ZP_07436781.2| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|308376311|ref|ZP_07438363.2| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
 gi|308332440|gb|EFP21291.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 gi|308336203|gb|EFP25054.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
 gi|308339806|gb|EFP28657.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
 gi|308341301|gb|EFP30152.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
 gi|308351526|gb|EFP40377.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
          Length = 254

 Score = 39.4 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 18/73 (24%)

Query: 176 LQVNLMRI---KKLLEQ--------------KMGLRYVLV-NIPAASLEAVENGKVGLRS 217
           +  N++R    +                   + G   + V +I A +     NG+V    
Sbjct: 92  VASNVVRWVPHRYWPPHTRVSVGVQELTEGFETGDALIGVASISAHTFTVSRNGEVLRTM 151

Query: 218 TVIVGRVDRQTPI 230
              +G+  R TPI
Sbjct: 152 PASLGKPSRPTPI 164


>gi|261886092|ref|ZP_06010131.1| hypothetical protein CfetvA_14008 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 95

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 23/38 (60%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           +A V++A KL Q   G+ P G++   TL A+N+  + +
Sbjct: 21  NAGVKTAAKLAQKLAGVQPDGIIGIKTLSALNLGDEDK 58


>gi|13471560|ref|NP_103126.1| hypothetical protein mll1570 [Mesorhizobium loti MAFF303099]
 gi|14022302|dbj|BAB48912.1| mll1570 [Mesorhizobium loti MAFF303099]
          Length = 251

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 11/77 (14%)

Query: 95  PELPIR---PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P  PIR    L  G     V+ L+  L + G       +S  FD   +  V+ FQ RH  
Sbjct: 171 PAAPIRRGAALKAGERGADVEALQSMLALYGY---GVEISGIFDHQTQIVVEAFQ-RH-F 225

Query: 152 DP---SGMVDSSTLEAM 165
            P    G+ D ST+  +
Sbjct: 226 RPRLIDGLADGSTMRTL 242


>gi|300856612|ref|YP_003781596.1| hypothetical protein CLJU_c34530 [Clostridium ljungdahlii DSM
           13528]
 gi|300436727|gb|ADK16494.1| conserved protein [Clostridium ljungdahlii DSM 13528]
          Length = 220

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 84  FYQDILSRGGWPELP----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           +Y  I++  G P  P    +R L  G     V  ++ RL  +G    S  +   +   ++
Sbjct: 131 YYGMIVAVYGGPYGPFGKELRTLTPGVRGADVYEIQRRLKDAGYYCGS--MDGIYGESMK 188

Query: 140 SAVKLFQMRHGLDP 153
             V  F+  + L  
Sbjct: 189 KCVMKFRRDNKLPE 202


>gi|73950335|ref|XP_544383.2| PREDICTED: similar to matrix metalloproteinase 14
           (membrane-inserted) [Canis familiaris]
          Length = 741

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 9/96 (9%)

Query: 118 LIISGDLD-PSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  PS+ +S    A  + SA+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 120 LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKAWMKRPRCGVPDQ 179

Query: 172 RIRQLQVNLMRIKK---LLEQKMGLRYVLVNIPAAS 204
              +++ NL R +K   L  +K    ++  +I   +
Sbjct: 180 FGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYT 215


>gi|306843211|ref|ZP_07475823.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. BO2]
 gi|306286601|gb|EFM58176.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. BO2]
          Length = 268

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 7/73 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVD-- 158
           L  G     V+ L+  L + G       ++  FD   E  +K FQ         G+ D  
Sbjct: 195 LARGEQGQPVEALQSMLALYGY---EIAITGIFDEATEIVIKAFQRHFRPQNVDGVADVS 251

Query: 159 -SSTLEAMNVPVD 170
              TL  +N  + 
Sbjct: 252 TIDTLYRLNFSLQ 264


>gi|168178292|ref|ZP_02612956.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC
           2916]
 gi|168184118|ref|ZP_02618782.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf]
 gi|226948166|ref|YP_002803257.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|237794190|ref|YP_002861742.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str.
           657]
 gi|182670899|gb|EDT82873.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC
           2916]
 gi|182672811|gb|EDT84772.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf]
 gi|226841594|gb|ACO84260.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|229261214|gb|ACQ52247.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str.
           657]
          Length = 125

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            +++N  A +L    N  V     V VG+    TP    +I     NP
Sbjct: 17  RIVINTKAHTLTLFRNNNVYKTYKVAVGKPSTPTPKGTFKIINRAINP 64


>gi|308173260|ref|YP_003919965.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307606124|emb|CBI42495.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens DSM 7]
          Length = 292

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               S   V +++  L            + G+   +     +AV  FQ  +GL   G+  
Sbjct: 222 EPYTSGEKVYQVQNALAALYFYPEKGAANNGIDGIYGPKTANAVARFQSVYGLPSDGIYG 281

Query: 159 SS 160
            +
Sbjct: 282 PA 283


>gi|291550549|emb|CBL26811.1| Uncharacterized protein conserved in bacteria [Ruminococcus torques
           L2-14]
          Length = 470

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTP 229
            Q  G  Y  V++    +  V++G+V + + V+ G     R TP
Sbjct: 336 AQDWGSTYAEVDLTNQKMWYVKDGEVLMSADVVTGLPKGGRSTP 379


>gi|332257486|ref|XP_003277835.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-21-like
           [Nomascus leucogenys]
          Length = 532

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 34/117 (29%), Gaps = 25/117 (21%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              +    + ++     D       P+   + IA    A    Q  LSR GW  +     
Sbjct: 15  WLAAPWPTQPESLFHSRDRSDLEPSPLRQAKPIADLHAA----QRFLSRYGWSGVRA--- 67

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                              G        +    A +  AV+ FQ  + L  SG +D+
Sbjct: 68  -----------------AWGPSPEGPPETPK-GAALAEAVRRFQRANALPASGELDA 106


>gi|313836530|gb|EFS74244.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL037PA2]
 gi|314928984|gb|EFS92815.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL044PA1]
 gi|314971123|gb|EFT15221.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL037PA3]
 gi|328906571|gb|EGG26346.1| lipoprotein A-like protein [Propionibacterium sp. P08]
          Length = 361

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ T   
Sbjct: 142 GDHNARSKVVQRDLSTLNYF-PAKWVGLPYGPATTNAVKVFQRANALKQTGVTDAVTQSL 200

Query: 165 MNVPVDLRIRQLQVNLM 181
           +        RQ   +  
Sbjct: 201 L-KSKANYQRQRAASAE 216


>gi|224122140|ref|XP_002318762.1| predicted protein [Populus trichocarpa]
 gi|222859435|gb|EEE96982.1| predicted protein [Populus trichocarpa]
          Length = 341

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           H G     + +L+      G +  S    +  FD  +ESA++ +Q    L+ +G +D  T
Sbjct: 53  HAGEKYDGLAKLKSYFQYFGYIPNSLSNFTDDFDDSLESALRTYQQNFNLNITGQLDDQT 112

Query: 162 LEAMNVP 168
           +  +  P
Sbjct: 113 VNHIVRP 119


>gi|161619391|ref|YP_001593278.1| protein ampD [Brucella canis ATCC 23365]
 gi|161336202|gb|ABX62507.1| Protein ampD [Brucella canis ATCC 23365]
          Length = 268

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 7/73 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVD-- 158
           L  G     V+ L+  L + G       ++  FD   E  +K FQ         G+ D  
Sbjct: 195 LARGEQGQPVEALQSMLALYGY---EIAITGIFDEATEIVIKAFQRHFRPQNVDGVADVS 251

Query: 159 -SSTLEAMNVPVD 170
              TL  +N  + 
Sbjct: 252 TIDTLYRLNFSLQ 264


>gi|17986848|ref|NP_539482.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella melitensis bv.
           1 str. 16M]
 gi|23502315|ref|NP_698442.1| N-acetylmuramoyl-L-alanine amidase [Brucella suis 1330]
 gi|62290337|ref|YP_222130.1| N-acetylmuramoyl-L-alanine amidase [Brucella abortus bv. 1 str.
           9-941]
 gi|82700260|ref|YP_414834.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis biovar Abortus 2308]
 gi|148559422|ref|YP_001259335.1| N-acetylmuramoyl-L-alanine amidase [Brucella ovis ATCC 25840]
 gi|163843698|ref|YP_001628102.1| protein ampD [Brucella suis ATCC 23445]
 gi|189024568|ref|YP_001935336.1| peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|225852925|ref|YP_002733158.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           ATCC 23457]
 gi|237815842|ref|ZP_04594839.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella abortus str.
           2308 A]
 gi|254689636|ref|ZP_05152890.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 6
           str. 870]
 gi|254694126|ref|ZP_05155954.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 3
           str. Tulya]
 gi|254697778|ref|ZP_05159606.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254702163|ref|ZP_05163991.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 5
           str. 513]
 gi|254704700|ref|ZP_05166528.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 3
           str. 686]
 gi|254708114|ref|ZP_05169942.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M163/99/10]
 gi|254710483|ref|ZP_05172294.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           B2/94]
 gi|254714476|ref|ZP_05176287.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M644/93/1]
 gi|254717374|ref|ZP_05179185.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M13/05/1]
 gi|254719473|ref|ZP_05181284.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella sp. 83/13]
 gi|254730667|ref|ZP_05189245.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 4
           str. 292]
 gi|256031977|ref|ZP_05445591.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M292/94/1]
 gi|256045072|ref|ZP_05447973.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256061499|ref|ZP_05451643.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella neotomae
           5K33]
 gi|256114001|ref|ZP_05454778.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 3 str. Ether]
 gi|256257886|ref|ZP_05463422.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 9
           str. C68]
 gi|256263595|ref|ZP_05466127.1| N-acetylmuramoyl-L-alanine amidase [Brucella melitensis bv. 2 str.
           63/9]
 gi|256369860|ref|YP_003107371.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Brucella microti CCM
           4915]
 gi|260546877|ref|ZP_05822616.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus NCTC
           8038]
 gi|260565329|ref|ZP_05835813.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 1 str. 16M]
 gi|260566052|ref|ZP_05836522.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 4
           str. 40]
 gi|260755165|ref|ZP_05867513.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 6
           str. 870]
 gi|260758384|ref|ZP_05870732.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 4
           str. 292]
 gi|260762210|ref|ZP_05874553.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260884179|ref|ZP_05895793.1| N-acetylmuramoyl-L-alanine amidase [Brucella abortus bv. 9 str.
           C68]
 gi|261214427|ref|ZP_05928708.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 3
           str. Tulya]
 gi|261219206|ref|ZP_05933487.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M13/05/1]
 gi|261315618|ref|ZP_05954815.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M163/99/10]
 gi|261318055|ref|ZP_05957252.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           B2/94]
 gi|261322267|ref|ZP_05961464.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M644/93/1]
 gi|261325507|ref|ZP_05964704.1| N-acetylmuramoyl-L-alanine amidase [Brucella neotomae 5K33]
 gi|261752734|ref|ZP_05996443.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 5
           str. 513]
 gi|261755394|ref|ZP_05999103.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 3
           str. 686]
 gi|265984481|ref|ZP_06097216.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella sp. 83/13]
 gi|265989088|ref|ZP_06101645.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M292/94/1]
 gi|265991501|ref|ZP_06104058.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|265995339|ref|ZP_06107896.1| N-acetylmuramoyl-L-alanine amidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|294852769|ref|ZP_06793442.1| N-acetylmuramoyl-L-alanine amidase [Brucella sp. NVSL 07-0026]
 gi|297248723|ref|ZP_06932441.1| N-acetylmuramoyl-L-alanine amidase [Brucella abortus bv. 5 str.
           B3196]
 gi|306839252|ref|ZP_07472069.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. NF 2653]
 gi|17982484|gb|AAL51746.1| anhydro-n-acetylmuramyl-tripeptide amidase [Brucella melitensis bv.
           1 str. 16M]
 gi|23348293|gb|AAN30357.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Brucella suis 1330]
 gi|62196469|gb|AAX74769.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Brucella abortus bv.
           1 str. 9-941]
 gi|82616361|emb|CAJ11418.1| Putative peptidoglycan binding domain 1:N-acetylmuramoyl-L-alanine
           amidase, family 2 [Brucella melitensis biovar Abortus
           2308]
 gi|148370679|gb|ABQ60658.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Brucella ovis ATCC
           25840]
 gi|163674421|gb|ABY38532.1| Protein ampD [Brucella suis ATCC 23445]
 gi|189020140|gb|ACD72862.1| Putative peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|225641290|gb|ACO01204.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           ATCC 23457]
 gi|237789140|gb|EEP63351.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella abortus str.
           2308 A]
 gi|256000023|gb|ACU48422.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Brucella microti CCM
           4915]
 gi|260095927|gb|EEW79804.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus NCTC
           8038]
 gi|260151397|gb|EEW86491.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 1 str. 16M]
 gi|260155570|gb|EEW90650.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 4
           str. 40]
 gi|260668702|gb|EEX55642.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 4
           str. 292]
 gi|260672642|gb|EEX59463.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260675273|gb|EEX62094.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 6
           str. 870]
 gi|260873707|gb|EEX80776.1| N-acetylmuramoyl-L-alanine amidase [Brucella abortus bv. 9 str.
           C68]
 gi|260916034|gb|EEX82895.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 3
           str. Tulya]
 gi|260924295|gb|EEX90863.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M13/05/1]
 gi|261294957|gb|EEX98453.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M644/93/1]
 gi|261297278|gb|EEY00775.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           B2/94]
 gi|261301487|gb|EEY04984.1| N-acetylmuramoyl-L-alanine amidase [Brucella neotomae 5K33]
 gi|261304644|gb|EEY08141.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M163/99/10]
 gi|261742487|gb|EEY30413.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 5
           str. 513]
 gi|261745147|gb|EEY33073.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 3
           str. 686]
 gi|262766452|gb|EEZ12241.1| N-acetylmuramoyl-L-alanine amidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263002285|gb|EEZ14860.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|263093644|gb|EEZ17649.1| N-acetylmuramoyl-L-alanine amidase [Brucella melitensis bv. 2 str.
           63/9]
 gi|264661285|gb|EEZ31546.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M292/94/1]
 gi|264663073|gb|EEZ33334.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella sp. 83/13]
 gi|294821358|gb|EFG38357.1| N-acetylmuramoyl-L-alanine amidase [Brucella sp. NVSL 07-0026]
 gi|297175892|gb|EFH35239.1| N-acetylmuramoyl-L-alanine amidase [Brucella abortus bv. 5 str.
           B3196]
 gi|306405799|gb|EFM62061.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. NF 2653]
 gi|326409467|gb|ADZ66532.1| Putative peptidoglycan binding domain 1 [Brucella melitensis M28]
 gi|326539174|gb|ADZ87389.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           M5-90]
          Length = 268

 Score = 39.0 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 7/73 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVD-- 158
           L  G     V+ L+  L + G       ++  FD   E  +K FQ         G+ D  
Sbjct: 195 LARGEQGQPVEALQSMLALYGY---EIAITGIFDEATEIVIKAFQRHFRPQNVDGVADVS 251

Query: 159 -SSTLEAMNVPVD 170
              TL  +N  + 
Sbjct: 252 TIDTLYRLNFSLQ 264


>gi|300814270|ref|ZP_07094542.1| ErfK/YbiS/YcfS/YnhG [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511537|gb|EFK38765.1| ErfK/YbiS/YcfS/YnhG [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 458

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 12/80 (15%)

Query: 162 LEAMNVPVDLRI----RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           ++A+N   D  +    R + VN    + +    +G  Y+ V++   +    ++GK+ L +
Sbjct: 300 IKALNERKDKELTPVYRTVAVN----RAV--NDLGNSYIEVDLARQNAWLYKDGKLILET 353

Query: 218 TVIVGRV--DRQTPILHSRI 235
            ++ G    +  TP    +I
Sbjct: 354 KIVTGNPGENNATPTGTHKI 373


>gi|197117605|ref|YP_002138032.1| peptidoglycan-binding ATPase [Geobacter bemidjiensis Bem]
 gi|197086965|gb|ACH38236.1| peptidoglycan-binding ATPase, putative [Geobacter bemidjiensis Bem]
          Length = 536

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +  V+ L+  L   G  D +    ++     ++AV  FQ R  L   G +   TL  +
Sbjct: 457 EKAAGVKLLQGLLKQVGCYDGAVNGELS--DKTQAAVAEFQRREQLTADGKLGGQTLMML 514


>gi|73808271|ref|NP_001027449.1| putative MMP28 gene product isoform 3 precursor [Homo sapiens]
 gi|332847988|ref|XP_003315565.1| PREDICTED: matrix metalloproteinase-28-like [Pan troglodytes]
 gi|15079976|gb|AAH11774.1| Matrix metallopeptidase 28 [Homo sapiens]
          Length = 130

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER----LIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G      Q LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGHLDAQPAERGG-----QELRKEAEAFLEKYGYLNEQVPKAPTSTRF----SDAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|75908094|ref|YP_322390.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701819|gb|ABA21495.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 261

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 14/146 (9%)

Query: 35  VLDEIINESYHSIVNDRFDNFLARVDMGID-SDIPIISKETIAQTEKAIAFYQDILSRGG 93
           + +        +     F   L  +   +  ++ P+    T A+T+KAI+ +Q      G
Sbjct: 24  ISNTTFAARQRNYTPQEFRTVLRGLGYNVKVTNTPL----TDAETKKAISEFQK-----G 74

Query: 94  WPELP----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           +   P      P     ++  VQ L+  L      +P       +    E+A+K FQ +H
Sbjct: 75  YKLTPVDGIAGPKTQDFAANIVQILQANLNAVLKTNPPLPRDQFYGPKTEAAIKEFQTKH 134

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQ 175
            L+ +G+ + +  + ++      I Q
Sbjct: 135 KLEATGIANLALRQKLDEEAKKVISQ 160


>gi|281417038|ref|ZP_06248058.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
 gi|281408440|gb|EFB38698.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
          Length = 230

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P + L  G+    V ++++ L   G        S  F   ++ +V  FQ  + +  +G V
Sbjct: 148 PFKELKSGDVGSDVLKVQKALKKLGYFH--DWPSGKFQDNLKKSVIKFQKNNKIKVTGTV 205

Query: 158 DSS 160
           + S
Sbjct: 206 NKS 208


>gi|253580585|ref|ZP_04857849.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847956|gb|EES75922.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 301

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 22/48 (45%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L++ G       +   F + + +AVK FQ   GL  SG  D +T   +
Sbjct: 252 LLLHGYNPNGVEIPGIFGSGLLTAVKTFQKAQGLTVSGTCDRNTFLKL 299


>gi|125974431|ref|YP_001038341.1| carboxyl-terminal protease [Clostridium thermocellum ATCC 27405]
 gi|256005216|ref|ZP_05430184.1| carboxyl-terminal protease [Clostridium thermocellum DSM 2360]
 gi|281418956|ref|ZP_06249974.1| carboxyl-terminal protease [Clostridium thermocellum JW20]
 gi|125714656|gb|ABN53148.1| carboxyl-terminal protease [Clostridium thermocellum ATCC 27405]
 gi|255990870|gb|EEU00984.1| carboxyl-terminal protease [Clostridium thermocellum DSM 2360]
 gi|281407413|gb|EFB37673.1| carboxyl-terminal protease [Clostridium thermocellum JW20]
 gi|316941567|gb|ADU75601.1| carboxyl-terminal protease [Clostridium thermocellum DSM 1313]
          Length = 505

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           + L   G            D     AV  FQ   GL   G++D +T +A+N
Sbjct: 432 KILSALGY--DVDTPDNLMDEKTVKAVAEFQRDCGLYSYGVLDFATQQALN 480


>gi|222147474|ref|YP_002548431.1| hypothetical protein Avi_0601 [Agrobacterium vitis S4]
 gi|221734464|gb|ACM35427.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 1275

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 19/114 (16%)

Query: 69   IISKETIAQTEKAIAFYQDILSRGGWPELPI---------------RPLHLGNSS--VSV 111
               +E +A++ +  A  +   S   W  +P+               + L  G+     +V
Sbjct: 1159 AAKQEEVARSMQPAALARAKASVQQWQTMPMNADANTVNLPDEWVGKSLKTGSVDMEKAV 1218

Query: 112  QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            + ++  L  +G    +        A   +A+K FQ   G +PSG V +  ++A+
Sbjct: 1219 RNIQAILNKNGF--NAGEPDGKLGARTVAAIKAFQTSVGQEPSGKVSNELVKAL 1270


>gi|218462264|ref|ZP_03502355.1| Peptidoglycan-binding domain 1 protein [Rhizobium etli Kim 5]
          Length = 244

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L +RL + G    +  +          A+K FQ    L  +G  D +T+EA+
Sbjct: 8   LIQRLRLHGAY--AGVVDDVHGRATIEALKRFQHAEALPETGQADETTIEAL 57


>gi|328871644|gb|EGG20014.1| hypothetical protein DFA_07130 [Dictyostelium fasciculatum]
          Length = 434

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 101 PLHLGNSSV----SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            L  G  S     ++  L   L+  G ++ +      + +  E A+K FQ+ +G   +G+
Sbjct: 349 SLKEGVKSSSPPEAISVLNYSLLFIGYMEDTLSKE-MYTSNTEFAIKKFQLDNGFPETGI 407

Query: 157 VDSSTLEAM 165
            D  T++++
Sbjct: 408 ADFPTMKSI 416


>gi|29830746|ref|NP_825380.1| peptidoglycan-binding protein [Streptomyces avermitilis MA-4680]
 gi|29607859|dbj|BAC71915.1| putative peptidoglycan-binding protein, secreted [Streptomyces
           avermitilis MA-4680]
          Length = 134

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LGN    V  L+  L        +      F      A+K  Q + G    G+   +T
Sbjct: 58  LALGNRGDGVLALQRTLRRC--YGSTIVADGIFGPSTRDALKYAQHQAGTQDDGVYGPNT 115

Query: 162 LEAM 165
             A+
Sbjct: 116 RRAI 119


>gi|209965073|ref|YP_002297988.1| localization factor PodJL [Rhodospirillum centenum SW]
 gi|209958539|gb|ACI99175.1| localization factor PodJL [Rhodospirillum centenum SW]
          Length = 335

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             ++Q  ++ L   G            DA   +AVK +Q   GL  +G +D +T++ +
Sbjct: 65  GATIQWAQQILDEKGFYQGRAHG--RLDAATTAAVKAYQKSVGLKVTGTLDKATVDRL 120


>gi|126732715|ref|ZP_01748511.1| peptidoglycan binding domain protein [Sagittula stellata E-37]
 gi|126706845|gb|EBA05915.1| peptidoglycan binding domain protein [Sagittula stellata E-37]
          Length = 466

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +G WP    RPL    +S   + L+ RL  +G    +KG+          A++ +Q R G
Sbjct: 398 QGSWPR-DNRPL----TSSERKELQTRLTQAGY--DTKGVDGRIGPMTLQAIRGYQRRAG 450

Query: 151 LDPSGMVDSSTLEAM 165
           L P G      L+ +
Sbjct: 451 LVPDGYASMELLKKL 465


>gi|326508750|dbj|BAJ95897.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326534042|dbj|BAJ89371.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 382

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R L +G+    V+ ++E L   G     +     +F    E AVK +Q   G    G++ 
Sbjct: 183 RALRVGSEGEEVRAMQEALEKLGFYSGEEDTEFSSFSTGTERAVKTWQASIGTTEDGLMT 242

Query: 159 SSTLEAM 165
           S  LE +
Sbjct: 243 SELLEML 249


>gi|326503598|dbj|BAJ86305.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 382

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R L +G+    V+ ++E L   G     +     +F    E AVK +Q   G    G++ 
Sbjct: 183 RALRVGSEGEEVRAMQEALEKLGFYSGEEDTEFSSFSTGTERAVKTWQASIGTTEDGLMT 242

Query: 159 SSTLEAM 165
           S  LE +
Sbjct: 243 SELLEML 249


>gi|288962623|ref|YP_003452917.1| plasma membrane H+-transporting two-sector ATPase [Azospirillum sp.
           B510]
 gi|288914889|dbj|BAI76373.1| plasma membrane H+-transporting two-sector ATPase [Azospirillum sp.
           B510]
          Length = 1139

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
              + AV+ FQ   GL P+G +D+ TL  + +       Q
Sbjct: 83  ERTQRAVRAFQRGQGLTPTGTLDAETLRRLGIGDSAPASQ 122


>gi|170742496|ref|YP_001771151.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium sp. 4-46]
 gi|168196770|gb|ACA18717.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium sp. 4-46]
          Length = 249

 Score = 39.0 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 19/123 (15%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW------------PELPIRPLH--- 103
           +   I +  PI +   +  ++ A A  QD      W            P +PIR      
Sbjct: 121 LSRDILARWPIRADRVLGHSDVAPARKQDPGETFPWARLHREGIGHFVPPVPIRDGRFFA 180

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSSTL 162
            G++   ++ L+    + G     + ++  FD+ + + V+ FQ     +   G+ DSST+
Sbjct: 181 EGDAGQPIEALQAMFALYGY---DQPVTGRFDSGMRAVVEAFQRHFRPERVDGVADSSTI 237

Query: 163 EAM 165
             +
Sbjct: 238 TTL 240


>gi|269955655|ref|YP_003325444.1| peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304336|gb|ACZ29886.1| Peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 360

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           R L  G     V+++++ L  +G L      +  F     +AV+ +Q   G+   G+V
Sbjct: 121 RDLGAGTVGEDVRQIQQLLHDTGFLVAEP--TGRFGPATTAAVRAWQRSLGVTVDGVV 176


>gi|146329733|ref|YP_001209644.1| hypothetical protein DNO_0739 [Dichelobacter nodosus VCS1703A]
 gi|146233203|gb|ABQ14181.1| conserved hypothetical membrane protein [Dichelobacter nodosus
           VCS1703A]
          Length = 275

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 124 LDPSKGLSVAFDAYVESAVKL----FQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQL-- 176
           L P+       D  V S V+      Q   G+   G++ + TL+A+   PV+  I  L  
Sbjct: 77  LLPAGVDYALLDFAVHSGVRRAAKTIQKIAGVPTDGIIGAQTLKALKQQPVEPLIEALCM 136

Query: 177 --QVNLMRIKKLLEQKMG 192
                L R+K     K G
Sbjct: 137 ERMAFLKRLKNWHAFKRG 154


>gi|307293274|ref|ZP_07573120.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum
           L-1]
 gi|306881340|gb|EFN12556.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum
           L-1]
          Length = 362

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 8/59 (13%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            PG    +    I+    +  Y +H TPEP     + R E+ GC+R+ N     L   +
Sbjct: 299 KPGPNGPVGVVWIDLSKPH--YGIHGTPEP---QTIGRAESHGCIRLTNWDAARLAQMV 352


>gi|126323935|ref|XP_001378518.1| PREDICTED: similar to membrane-type-4 matrix metalloproteinase
           [Monodelphis domestica]
          Length = 589

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P   ++        +  A+   Q   GL+ +G++D +TL+ M  P
Sbjct: 43  LSRFGYLPPPDPVTGQLQTQEELAKAIAAMQRFGGLEATGVLDEATLQLMKTP 95


>gi|119390203|pdb|2IKB|A Chain A, Crystal Structure Of A Protein Of Unknown Function Nmb1012
           From Neisseria Meningitidis
 gi|119390204|pdb|2IKB|B Chain B, Crystal Structure Of A Protein Of Unknown Function Nmb1012
           From Neisseria Meningitidis
 gi|119390205|pdb|2IKB|C Chain C, Crystal Structure Of A Protein Of Unknown Function Nmb1012
           From Neisseria Meningitidis
 gi|119390206|pdb|2IKB|D Chain D, Crystal Structure Of A Protein Of Unknown Function Nmb1012
           From Neisseria Meningitidis
          Length = 167

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 5/65 (7%)

Query: 123 DLDPSKGLSVAFDAYVE----SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
           D  P       FDA V     +A +  Q   G+   G++ + +L+A+N   +  +  L+ 
Sbjct: 71  DQXPEAVAFQFFDACVNHGYGNAARXLQRAAGVPDDGVIGAVSLKAINSLPENDL-LLRF 129

Query: 179 NLMRI 183
           N  R+
Sbjct: 130 NAERL 134


>gi|148556704|ref|YP_001264286.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingomonas wittichii RW1]
 gi|148501894|gb|ABQ70148.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingomonas wittichii RW1]
          Length = 328

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLL 357
            PG    +    I+   ++  Y +H TP P     + R E+ GC+R+ N     L + + 
Sbjct: 265 PPGPNGPVGVVWIDLDKQH--YGIHGTPNP---EKIGRTESHGCIRLTNWDAARLAMMVK 319

Query: 358 KDTP 361
             TP
Sbjct: 320 PGTP 323


>gi|292493016|ref|YP_003528455.1| hypothetical protein Nhal_3011 [Nitrosococcus halophilus Nc4]
 gi|291581611|gb|ADE16068.1| protein of unknown function DUF323 [Nitrosococcus halophilus Nc4]
          Length = 799

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 13/81 (16%)

Query: 95  PELPIRPLHLG----------NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           P++P +P              ++S  VQ  R  L I G     +G+   F    E A++ 
Sbjct: 418 PKVPSKPELPSPQKVEAEFDLSTSQRVQVQRA-LDILG--HDPQGVDGIFGPKTEDAIRS 474

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           +Q   GL+P+G +  +T E +
Sbjct: 475 WQRAEGLEPTGDLTQATYEQL 495


>gi|119390280|pdb|2IS5|A Chain A, Crystal Structure Of 3 Residues Truncated Version Of
           Protein Nmb1012 From Neisseria Meningitides
 gi|119390281|pdb|2IS5|B Chain B, Crystal Structure Of 3 Residues Truncated Version Of
           Protein Nmb1012 From Neisseria Meningitides
 gi|119390282|pdb|2IS5|C Chain C, Crystal Structure Of 3 Residues Truncated Version Of
           Protein Nmb1012 From Neisseria Meningitides
 gi|119390283|pdb|2IS5|D Chain D, Crystal Structure Of 3 Residues Truncated Version Of
           Protein Nmb1012 From Neisseria Meningitides
          Length = 166

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 5/65 (7%)

Query: 123 DLDPSKGLSVAFDAYVE----SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
           D  P       FDA V     +A +  Q   G+   G++ + +L+A+N   +  +  L+ 
Sbjct: 72  DQXPEAVAFQFFDACVNHGYGNAARXLQRAAGVPDDGVIGAVSLKAINSLPENDL-LLRF 130

Query: 179 NLMRI 183
           N  R+
Sbjct: 131 NAERL 135


>gi|304320863|ref|YP_003854506.1| hypothetical protein PB2503_06492 [Parvularcula bermudensis
           HTCC2503]
 gi|303299765|gb|ADM09364.1| hypothetical protein PB2503_06492 [Parvularcula bermudensis
           HTCC2503]
          Length = 403

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 8/93 (8%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           I     AIA  +       WP    R L L       Q L+ER       DP     +  
Sbjct: 318 IGLLSDAIAG-RQSALSTQWPR-DDRSLSLTERKSLQQTLKER-----GYDPGPVDGII- 369

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            A  ++A++ +Q   GL   G   + TL  +++
Sbjct: 370 GAGTKAALRAWQRDQGLPADGYASARTLSVLSM 402


>gi|312084157|ref|XP_003144160.1| hypothetical protein LOAG_08582 [Loa loa]
 gi|307760677|gb|EFO19911.1| hypothetical protein LOAG_08582 [Loa loa]
          Length = 266

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAF----DAYVESAVKLF--QMRHGLDPSG 155
            G+S  S+   R+      D   S+ ++  +    D  V  A K F  Q  HG++  G
Sbjct: 191 PGDSLSSIPTTRK--FFWTDESSSQRVTATYMDFQDDAVVEARKHFGCQNLHGIEADG 246


>gi|316931482|ref|YP_004106464.1| peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           DX-1]
 gi|315599196|gb|ADU41731.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           DX-1]
          Length = 446

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           Q ++  L  +GD +      V+    + +A+K FQ   G  P+G+++      +
Sbjct: 52  QAIQSDLAWTGDYNGLINGEVS--DRMIAAIKQFQTNQGHKPTGVLNPQERGQL 103


>gi|192288521|ref|YP_001989126.1| peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192282270|gb|ACE98650.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 448

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           Q ++  L  +GD +      V+    + +A+K FQ   G  P+G+++      +
Sbjct: 53  QAIQSDLAWTGDYNGLINGEVS--DRMIAAIKQFQTNQGHKPTGVLNPQERGQL 104


>gi|149186655|ref|ZP_01864966.1| hypothetical protein ED21_29191 [Erythrobacter sp. SD-21]
 gi|148829563|gb|EDL48003.1| hypothetical protein ED21_29191 [Erythrobacter sp. SD-21]
          Length = 406

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 57/177 (32%), Gaps = 44/177 (24%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +  +  ++V+    +L A ++ K+    TV  G  +   PI    I  I  NP +   
Sbjct: 266 SDQPQVDRIVVSKSEDTLRAYQDDKLVALFTVSSGSSEFPLPIGEWDILGIAQNPPF--- 322

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                 D    + +     +  +  +                            PG    
Sbjct: 323 ------DYDPRVLEGDDDAEGESYTL---------------------------PPGPNGP 349

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           +    I+    +  Y +H TPEP     + R ++ GCVR+ N     L   + + T 
Sbjct: 350 VGVVWIDLSKEH--YGIHGTPEP---QTIGRAQSHGCVRLTNWDAARLARMVSQSTQ 401


>gi|284045118|ref|YP_003395458.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
 gi|283949339|gb|ADB52083.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
          Length = 345

 Score = 39.0 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 10/106 (9%)

Query: 153 PSGM------VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY---VLVNIPAA 203
             G+      +      A+    D R  +++  ++R K    Q +  +Y   + V+  A 
Sbjct: 168 QDGVDVDSRRLRRGVARALRRTDDARTVKVRAAVVRPKVTTAQ-LAKQYPVVITVDRAAF 226

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            L   +N ++    TV +G++   TP     I     +P W +P S
Sbjct: 227 RLSLWKNLRLAKSYTVAIGQIGLDTPAGLYEIQNKAVDPVWSVPNS 272


>gi|320354604|ref|YP_004195943.1| multi-sensor hybrid histidine kinase [Desulfobulbus propionicus DSM
            2032]
 gi|320123106|gb|ADW18652.1| multi-sensor hybrid histidine kinase [Desulfobulbus propionicus DSM
            2032]
          Length = 1626

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 64/183 (34%), Gaps = 39/183 (21%)

Query: 20   LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE 79
            LP G SL    + A+  +E   +S  + +ND                 PI   +      
Sbjct: 1348 LPGGRSLPILAMTANAFNEDREQSLRAGMNDHIAK-------------PIELAKLHELLI 1394

Query: 80   KAIAFYQDI-LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAY 137
            K +   QD+  + GG P     PL  G++ +    L  RL     L+ + GL +   DA 
Sbjct: 1395 KWLPPRQDLPAAAGGDP-----PLLPGDARLRQTDLLARLQAVDGLEATAGLKLLRGDAS 1449

Query: 138  V-ESAVKLFQMRHGLDPSGM----------VD--SSTLEAMNVPV----DLRIRQLQVNL 180
                 ++ F  +HG    G+                T  A+          RI QL  +L
Sbjct: 1450 RYVQVLRQFVDQHG--QDGIELARQAKSGAFGAIRQTAHALKGAAGTLGARRIEQLAADL 1507

Query: 181  MRI 183
             R+
Sbjct: 1508 ERL 1510


>gi|239926862|ref|ZP_04683815.1| secreted peptidase [Streptomyces ghanaensis ATCC 14672]
 gi|291435207|ref|ZP_06574597.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291338102|gb|EFE65058.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 217

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 4/64 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH---GLDPSGMVDSST 161
           G     +Q  ++ LI  G    + G +  +     +AV  FQ +    G    G+    T
Sbjct: 13  GGKDSCIQTFQKALIAKGH-KIADGATGYYGDQTRAAVAAFQRKQGWTGPAADGLPGPQT 71

Query: 162 LEAM 165
              +
Sbjct: 72  FAKL 75


>gi|315637269|ref|ZP_07892488.1| conserved hypothetical protein [Arcobacter butzleri JV22]
 gi|315478433|gb|EFU69147.1| conserved hypothetical protein [Arcobacter butzleri JV22]
          Length = 196

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMN 166
           A+K  Q   G+   G++ + TL+A+N
Sbjct: 117 AIKEAQKLIGVAADGIIGTQTLKALN 142


>gi|47220689|emb|CAG11758.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 439

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 118 LIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           LI  G L D +      +   V  A+++FQ  + L P+G  D +T++ M  P
Sbjct: 6   LIKYGYLKDAADQEDPQYLEEVIEALRVFQKANDLLPTGEPDEATIQVMRQP 57


>gi|291545277|emb|CBL18386.1| Putative peptidoglycan-binding domain-containing protein
           [Ruminococcus sp. 18P13]
          Length = 165

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISG---DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+S   V  ++  L   G   D      ++ +F+A   +A++  Q    L  +G VD
Sbjct: 93  LREGDSGTLVYIVQAMLNDIGSRYDNLAPVAINGSFNAATTNAIRGVQQAADLPQTGAVD 152

Query: 159 SSTLEAMNVPVD 170
             T   M   V 
Sbjct: 153 RDTWNWMVTAVQ 164



 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           P+      +     SAV+ FQ  + L  +G V+ +T +A+
Sbjct: 30  PTVTPDGIYGPRTVSAVQAFQKIYNLPATGEVNRATWDAI 69


>gi|281346053|gb|EFB21637.1| hypothetical protein PANDA_004527 [Ailuropoda melanoleuca]
          Length = 564

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L PS   + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 4   LKSYGYLLPSDSRAPALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 56


>gi|320529545|ref|ZP_08030629.1| 3D domain protein [Selenomonas artemidis F0399]
 gi|320138166|gb|EFW30064.1| 3D domain protein [Selenomonas artemidis F0399]
          Length = 234

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 8/124 (6%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +VQ ++E LI +G L+      VA  A   +A++  Q  H L   G+   +T 
Sbjct: 56  KEGMRGGAVQHVQELLIKAGYLEEGGADGVA-GAKTRAAIERCQTDHMLVVDGICGEATY 114

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             ++  V      L +   R +++   +   R + V+  A S     NG     S   +G
Sbjct: 115 LVLSGGVPYDPVALGIRDERSEQV--SRGSGRSLFVSATAYSAHDPGNG-----SRTAMG 167

Query: 223 RVDR 226
              R
Sbjct: 168 TPVR 171


>gi|313896950|ref|ZP_07830497.1| 3D domain protein [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974397|gb|EFR39865.1| 3D domain protein [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 234

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 8/124 (6%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +VQ ++E LI +G L+      VA  A   +A++  Q  H L   G+   +T 
Sbjct: 56  KEGMRGGAVQHVQELLIKAGYLEEGGADGVA-GAKTRAAIERCQTDHMLVVDGICGEATY 114

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             ++  V      L +   R +++   +   R + V+  A S     NG     S   +G
Sbjct: 115 LVLSGGVPYDPVALGIRDERSEQV--SRGSGRSLFVSATAYSAHDPGNG-----SRTAMG 167

Query: 223 RVDR 226
              R
Sbjct: 168 TPVR 171


>gi|311257207|ref|XP_003127010.1| PREDICTED: matrix metalloproteinase-15-like [Sus scrofa]
          Length = 656

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 9/96 (9%)

Query: 118 LIISGDLD-PSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  PS+ +S    A  + SA+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 38  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKAWMKRPRCGVPDQ 97

Query: 172 RIRQLQVNLMRIKK---LLEQKMGLRYVLVNIPAAS 204
              +++ NL R +K   L  +K    ++  +I   +
Sbjct: 98  FGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYT 133


>gi|156717858|ref|NP_001096469.1| matrix metallopeptidase 17 (membrane-inserted) [Xenopus (Silurana)
           tropicalis]
 gi|134024244|gb|AAI36207.1| LOC100125088 protein [Xenopus (Silurana) tropicalis]
          Length = 588

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P   ++        +  A+K  Q   GL  +G++D  TLE M  P
Sbjct: 45  LTKFGYLPPPDPVTGQLQTQEELSKAIKAMQEFGGLKATGILDEPTLELMKTP 97


>gi|126668023|ref|ZP_01738987.1| putative transglycosylase protein [Marinobacter sp. ELB17]
 gi|126627533|gb|EAZ98166.1| putative transglycosylase protein [Marinobacter sp. ELB17]
          Length = 480

 Score = 39.0 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             ++ L+ +L I G    +  +         SA+K  Q  HGL  +G +   TL ++  P
Sbjct: 340 AELKALQRQLAIYGYKPGT--IDGIMGQNTRSAIKRLQREHGLPETGWLSRETLLSLVEP 397


>gi|257791705|ref|YP_003182311.1| ErfK/YbiS/YcfS/YnhG family protein [Eggerthella lenta DSM 2243]
 gi|257475602|gb|ACV55922.1| ErfK/YbiS/YcfS/YnhG family protein [Eggerthella lenta DSM 2243]
          Length = 498

 Score = 39.0 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 188 EQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVD--RQTP 229
            Q  G RY+ V++        + +G +   S +I G+ D    TP
Sbjct: 364 SQDWGPRYMDVDLSEQHARFYDASGAIIWESDIITGKPDGEHDTP 408


>gi|297700574|ref|XP_002827314.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-28-like
           [Pongo abelii]
          Length = 511

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 10/79 (12%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER----LIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           W  L  +P   G      Q LR+     L   G L+     +    +    A++ FQ   
Sbjct: 17  WGRLDAQPAERGG-----QELRKEAEAFLEKYGYLNEQVPKAPT-SSRFSDAIRAFQWVS 70

Query: 150 GLDPSGMVDSSTLEAMNVP 168
            L  SG++D +TL  M  P
Sbjct: 71  QLPVSGVLDRATLRQMTRP 89


>gi|297159984|gb|ADI09696.1| Peptidoglycan-binding domain 1 protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 379

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 15/147 (10%)

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +  Y+++ + G  P+ P+R L        V++    L + G       ++  +      A
Sbjct: 112 LPMYRELAA-GRDPDRPLRGL-------DVKQFESNLAMLGY--SGFTVNDTYSQLTADA 161

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           VK +Q   G   +G V +  +  ++ P+ +    ++V       +L      R V V+ P
Sbjct: 162 VKRWQRDLGRPRTGKVGTGDIAYVSGPIRIARTSVRVGAQATGNVLSYTSTARSVTVDAP 221

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQT 228
           A      E G       V V   D  T
Sbjct: 222 AGETGWAERGN-----RVTVELPDGHT 243


>gi|288555862|ref|YP_003427797.1| hypothetical protein BpOF4_14280 [Bacillus pseudofirmus OF4]
 gi|288547022|gb|ADC50905.1| Uncharacterized erfK/srfK family protein, probably secreted
           [Bacillus pseudofirmus OF4]
          Length = 164

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 4/58 (6%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM--FNPY 243
              +G  Y+++NI    L  + +G+V     V  G+   +TP        ++   NPY
Sbjct: 17  NPALGDPYLIINIETNELAFIYDGQVQRVYRVASGKEGAETPE--GEFTVVVKAENPY 72


>gi|218439324|ref|YP_002377653.1| peptidoglycan-binding protein [Cyanothece sp. PCC 7424]
 gi|218172052|gb|ACK70785.1| Peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7424]
          Length = 92

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +V+ L+E L   G     K ++  F  Y E +V+ FQ + G+  +G+V+  T +A+N 
Sbjct: 24  GENVKHLQEFLSQLGHYK--KDINGYFCVYTEKSVRDFQFQIGIPVNGIVERRTWQAINR 81


>gi|170744460|ref|YP_001773115.1| peptidoglycan binding domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168198734|gb|ACA20681.1| Peptidoglycan-binding domain 1 protein [Methylobacterium sp. 4-46]
          Length = 513

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 14/91 (15%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYV----ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           LR R+I    L  +   +      +      A+K FQ ++G+ P G+        +N   
Sbjct: 39  LRSRVIAQVLLIATGHQTSVPTENLGLRTFEAIKRFQEQNGIWPDGV--------LNKST 90

Query: 170 DLRIRQLQVNLMRIK--KLLEQKMGLRYVLV 198
             R+      +M +   KLLE     R + V
Sbjct: 91  HDRLFATAAPMMTMWDFKLLEHPSRGRPIWV 121


>gi|147904008|ref|NP_001079285.1| matrix metalloproteinase-21 precursor [Xenopus laevis]
 gi|50400815|sp|O93470|MMP21_XENLA RecName: Full=Matrix metalloproteinase-21; Short=MMP-21;
           Short=xMMP; Flags: Precursor
 gi|3211705|gb|AAC21447.1| matrix metalloproteinase [Xenopus laevis]
          Length = 604

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 8/107 (7%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRE-RLIISG 122
           SD+   + E     +  ++  Q  L++ GW + +   P    +S+   + L++  L+  G
Sbjct: 32  SDLQPSAIEQAELVKDMLSA-QQFLAKYGWTQPVIWDP----SSTNENEPLKDFSLMQEG 86

Query: 123 DLDP-SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +P  +            A+K FQ  + L  +G +D +T+ AMN P
Sbjct: 87  VCNPRQEVAEPTKSPQFIDALKKFQKLNNLPVTGTLDDATINAMNKP 133


>gi|270012816|gb|EFA09264.1| matrix metalloproteinase 2 [Tribolium castaneum]
          Length = 701

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G +D +   + A   +  V  A+K  Q   G+  +G +D  TL+ +N P
Sbjct: 110 LTRFGYMDATADGAFALRTEESVRDAIKDMQEFAGIPVTGRLDERTLKLLNTP 162


>gi|229818792|ref|YP_002880318.1| Peptidoglycan-binding domain 1 protein [Beutenbergia cavernae DSM
           12333]
 gi|229564705|gb|ACQ78556.1| Peptidoglycan-binding domain 1 protein [Beutenbergia cavernae DSM
           12333]
          Length = 282

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 12/95 (12%)

Query: 82  IAFYQDILSRGGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           +  Y+ I+  G  P++        L  G+    V+ L++ L       P+      F   
Sbjct: 186 LNGYR-IVGGGRPPKVVVAQGAAGLKNGDRGPRVKALQQALNRWRSDLPALVADGVFGDL 244

Query: 138 VESAVKLFQMRHGLDP-------SGMVDSSTLEAM 165
            E  ++ +Q R+            G+    TL A+
Sbjct: 245 TERRLREWQTRNRGGAYPAAAQIDGVAGPLTLAAL 279


>gi|196234288|ref|ZP_03133118.1| Peptidoglycan-binding domain 1 protein [Chthoniobacter flavus
           Ellin428]
 gi|196221642|gb|EDY16182.1| Peptidoglycan-binding domain 1 protein [Chthoniobacter flavus
           Ellin428]
          Length = 200

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +S   V   ++RL   G    +  +   F A    A+  FQ  + L  SG +D++T+ A+
Sbjct: 141 DSGSLVMSAQDRLNRLGY--SAGPVDGVFGAQTRDALADFQNDNNLPVSGALDTATVRAL 198


>gi|189520793|ref|XP_699803.3| PREDICTED: matrix metalloproteinase-24 [Danio rerio]
          Length = 608

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 111 VQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           +  L+  L   G L P       +  +  ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 40  IVELQTWLKNYGYLLPHDIRTSDLRSEKAMQSAVAAMQRFYGIPVTGILDQTTIEWMRKP 99


>gi|302383894|ref|YP_003819717.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Brevundimonas subvibrioides ATCC 15264]
 gi|302194522|gb|ADL02094.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Brevundimonas subvibrioides ATCC 15264]
          Length = 253

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 4/66 (6%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM-RHGLDPSGMVDS 159
           PL +G+  + V  L+  L   G      G    +       V+ FQ         G+ D 
Sbjct: 174 PLTIGDEGLGVHVLQAGLHRLGYEPLPDG---RYTDETRITVEAFQRHWRPSKVDGIADG 230

Query: 160 STLEAM 165
            T   +
Sbjct: 231 ETRATL 236


>gi|294851105|ref|ZP_06791778.1| hypothetical protein BAZG_00002 [Brucella sp. NVSL 07-0026]
 gi|294819694|gb|EFG36693.1| hypothetical protein BAZG_00002 [Brucella sp. NVSL 07-0026]
          Length = 334

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 44/151 (29%), Gaps = 45/151 (29%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           ENGK+ +     +G  D  +                  P  I+Q +    +  +P Y  +
Sbjct: 216 ENGKLVVAYPSTIGSSDNPS------------------PSGIVQVE---RIAINPNYTYN 254

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNTYMHDTP 327
             I+       +V +                  PG    + +  I           H TP
Sbjct: 255 PKINFKQGNNDKVLII----------------PPGPNGPVGTVWIALSKPTYGI--HGTP 296

Query: 328 EPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            P          + GCVR+ N    +L   +
Sbjct: 297 APSRIGKTS---SHGCVRLTNWDAEELAKLV 324


>gi|285019706|ref|YP_003377417.1| protease [Xanthomonas albilineans GPE PC73]
 gi|283474924|emb|CBA17423.1| putative protease protein [Xanthomonas albilineans]
          Length = 705

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           +AVK +   HG+    +  + +L  +N PV    +QL VN  R +
Sbjct: 111 NAVKAYAQAHGMQIKSIGGAGSLITLNGPVGTFTKQLAVNFDRYQ 155


>gi|171911413|ref|ZP_02926883.1| hypothetical protein VspiD_09565 [Verrucomicrobium spinosum DSM
           4136]
          Length = 418

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           + +L+++     V+VNI A     V++G++   + +  GR  R TP
Sbjct: 280 RDVLDREHTDLRVIVNIGAQRAFLVKDGQIAFETPISTGRGPRMTP 325


>gi|154252852|ref|YP_001413676.1| N-acetylmuramoyl-L-alanine amidase [Parvibaculum lavamentivorans
           DS-1]
 gi|154156802|gb|ABS64019.1| N-acetylmuramoyl-L-alanine amidase family 2 [Parvibaculum
           lavamentivorans DS-1]
          Length = 247

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 19/128 (14%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD-----------ILSRGGW---PELPI 99
             +  + + I S  PI ++  +A ++ A A   D               G W     +  
Sbjct: 112 KAVEALSLEILSRHPIQARRVLAHSDIAPARKADPGEWFDWARLARAGVGVWVEPEPVGE 171

Query: 100 RP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMV 157
            P L  G+   +V  L+  L   G       +   +D   ++ V  FQ         G+ 
Sbjct: 172 GPVLREGDRGDTVAELQYLLADYGY---GLEVLGRYDEATKAVVTAFQRHFRPQKVDGVA 228

Query: 158 DSSTLEAM 165
           D ST+  +
Sbjct: 229 DVSTVTTL 236


>gi|282881828|ref|ZP_06290481.1| putative ErfK family protein [Peptoniphilus lacrimalis 315-B]
 gi|281298320|gb|EFA90763.1| putative ErfK family protein [Peptoniphilus lacrimalis 315-B]
          Length = 458

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRI 235
             +G  Y+ V++   +    ++GK+ L + ++ G    +  TP    +I
Sbjct: 325 NDLGNSYIEVDLARQNAWLYKDGKLILETKIVTGNPGENNATPTGTHKI 373


>gi|188579749|ref|YP_001923194.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179343247|gb|ACB78659.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 364

 Score = 38.7 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 48/156 (30%)

Query: 204 SLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            + A  E+GK+       +G  ++  P   +++  + F+P W                 +
Sbjct: 239 RVRAFGEDGKLTADYPASIGSDEKPAPDGSAKVKAVAFDP-WYT--------------YN 283

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNN 320
           P+Y           KG +               F     PG  N +    I+        
Sbjct: 284 PKY---------RFKGVKAT-----------KKFSI--HPGPNNPVGLVWIDLSIP-SYG 320

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
              H TP+P     V + E+ GC+R+ N    DL  
Sbjct: 321 I--HGTPDP---EKVGKTESHGCIRLTNWDARDLAS 351


>gi|300794469|ref|NP_001178363.1| matrix metallopeptidase 15 (membrane-inserted) [Bos taurus]
 gi|297485306|ref|XP_002694844.1| PREDICTED: matrix metallopeptidase 15 (membrane-inserted) [Bos
           taurus]
 gi|296478084|gb|DAA20199.1| matrix metallopeptidase 15 (membrane-inserted) [Bos taurus]
          Length = 675

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 9/96 (9%)

Query: 118 LIISGDLD-PSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  PS+ +S    A  + SA+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 57  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKAWMKRPRCGVPDQ 116

Query: 172 RIRQLQVNLMRIKK---LLEQKMGLRYVLVNIPAAS 204
              +++ NL R +K   L  +K    ++  +I   +
Sbjct: 117 FGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYT 152


>gi|326931703|ref|XP_003211965.1| PREDICTED: matrix metalloproteinase-24-like [Meleagris gallopavo]
          Length = 557

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            V  L   L   G L PS     A  +   V+SAV   Q  +G+  +G++D +TLE M  
Sbjct: 14  DVVELEGWLKTYGYLLPSDSQMSAAQSGKAVQSAVATMQRFYGIPVTGVLDQTTLEWMKK 73

Query: 168 P 168
           P
Sbjct: 74  P 74


>gi|332711166|ref|ZP_08431099.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332349980|gb|EGJ29587.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 108

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 11/73 (15%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG---------LD 152
           L  G +  +V+ L++ LI    +  S      F +  E AV+ FQ  +          L 
Sbjct: 33  LKKGTAGEAVRFLQQLLIC--YMGYSLVFDGQFGSQTEQAVRDFQSYYNSLYKSNPDYLI 90

Query: 153 PSGMVDSSTLEAM 165
             G+V   T  A+
Sbjct: 91  VDGIVGKETYRAI 103


>gi|251795296|ref|YP_003010027.1| carboxyl-terminal protease [Paenibacillus sp. JDR-2]
 gi|247542922|gb|ACS99940.1| carboxyl-terminal protease [Paenibacillus sp. JDR-2]
          Length = 472

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +LP    L  G+   +V+ L+  L   G      G    F+     A+  FQ  + L+ +
Sbjct: 379 QLPFGTELKTGSFGDNVKTLQLMLQELGY--TPVGDIGLFNGQTADALSRFQKDNKLEAT 436

Query: 155 GMVDSST 161
           G  +  T
Sbjct: 437 GTFNDMT 443


>gi|332264806|ref|XP_003281419.1| PREDICTED: matrix metalloproteinase-28 [Nomascus leucogenys]
          Length = 520

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER----LIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G      Q LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGRLDAQPAERGG-----QELRKEAEAFLEKYGYLNEQVPKAPTSTRFS----DAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|269956380|ref|YP_003326169.1| peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269305061|gb|ACZ30611.1| Peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 360

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           R L  G     V+++++ L  +G L      +  F     +AV+ +Q   G+   G+V
Sbjct: 121 RDLGAGTVGEDVRQIQQLLHDTGFLVADP--TGRFGPATTAAVRAWQRSLGVTVDGVV 176


>gi|307194255|gb|EFN76651.1| Matrix metalloproteinase-14 [Harpegnathos saltator]
          Length = 547

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 13/80 (16%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP------- 168
           L   G L PS   + AF     + +A++ FQ   GL+ +G ++  T   M  P       
Sbjct: 6   LSQYGYLQPSNPENGAFLSSDKLTAAIEEFQAFAGLNITGELNEETARLMATPRCGVKDK 65

Query: 169 ----VDLRIRQLQVNLMRIK 184
                D R ++  +   R +
Sbjct: 66  VGPAADGRSKRYALQGSRWR 85


>gi|332206790|ref|XP_003252478.1| PREDICTED: matrix metalloproteinase-19 [Nomascus leucogenys]
          Length = 503

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER-----LIISGDLDPSKGLSVAFDAY-VESAVKLFQM 147
           WP+L +  L     S  V  L E      L   G L      S  F    +  A++ FQ 
Sbjct: 3   WPQLWLGFLLPMTVSGRVLGLAEVAAVDYLSQYGYLQKPLEGSNNFKPEDITEALRAFQE 62

Query: 148 RHGLDPSGMVDSSTLEAMNVP 168
              L  SG +D +T   M  P
Sbjct: 63  ASELPVSGQLDDATRARMRQP 83


>gi|221194636|ref|ZP_03567693.1| ErfK/YbiS/YcfS/YnhG family protein [Atopobium rimae ATCC 49626]
 gi|221185540|gb|EEE17930.1| ErfK/YbiS/YcfS/YnhG family protein [Atopobium rimae ATCC 49626]
          Length = 598

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 3/45 (6%)

Query: 189 QKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVD--RQTPI 230
           Q  G RY+ V++         +NG +   + V+ G  D    TP 
Sbjct: 464 QDWGKRYIDVDLSEQHARLYDDNGSIIWEADVVTGIPDGHHNTPE 508


>gi|193212428|ref|YP_001998381.1| peptidoglycan-binding domain 1 protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085905|gb|ACF11181.1| Peptidoglycan-binding domain 1 protein [Chlorobaculum parvum NCIB
           8327]
          Length = 616

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 4/66 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ-MRHG-LDPSGMVDS 159
           L  G+    V  ++++L   G  +    +   F      A+  FQ    G  +  G+V  
Sbjct: 234 LRFGSQGELVHVIQQKLSARGFYEG--KIDSDFGLRTLQALLDFQTAEFGPSEDDGIVGP 291

Query: 160 STLEAM 165
            T  A+
Sbjct: 292 QTASAL 297


>gi|13472170|ref|NP_103737.1| hypothetical protein mlr2376 [Mesorhizobium loti MAFF303099]
 gi|14022915|dbj|BAB49523.1| mlr2376 [Mesorhizobium loti MAFF303099]
          Length = 200

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 8/68 (11%)

Query: 297 IFRQDPGKINAMASTKIEFY-SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLD 353
            F    G  N + S  I+          H TPEP     +    + GC+R+ N    DL 
Sbjct: 125 PFTIAAGPNNPVGSVWIDLSIESYGI--HGTPEPG---KIGTTFSHGCIRLTNWDAEDLA 179

Query: 354 VWLLKDTP 361
             + K T 
Sbjct: 180 SMVQKGTK 187


>gi|332968027|gb|EGK07114.1| N-acetylmuramoyl-L-alanine amidase [Desmospora sp. 8437]
          Length = 147

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 26/76 (34%), Gaps = 5/76 (6%)

Query: 95  PELPIRP-LHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHG-- 150
              P R    +G S  +V  + +RL+  G D     G    F       V+ FQ   G  
Sbjct: 63  KSFPGRSAFQMGKSHPAVTLMGKRLVAHGFDKHYKVGPGPTFSEADRKNVQDFQKAQGWT 122

Query: 151 -LDPSGMVDSSTLEAM 165
             D  G     T + +
Sbjct: 123 GSDADGYPGPETWKRL 138


>gi|308799155|ref|XP_003074358.1| putative Helicase SKI2W (ISS) [Ostreococcus tauri]
 gi|116000529|emb|CAL50209.1| putative Helicase SKI2W (ISS) [Ostreococcus tauri]
          Length = 1701

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           WP +        +    +  +  +L+ +G  +       + F A  + A+  FQ ++GL 
Sbjct: 43  WPMVKQNE----DDIYLMVLIHGKLVDAGFWVGEDDSDDMYFGATTKEALLYFQAQNGLT 98

Query: 153 PSGMVDSSTLEAM 165
            +G+VD  T  A+
Sbjct: 99  ETGLVDDETWRAL 111


>gi|157278511|ref|NP_001098357.1| membrane-type matrix metalloproteinase [Oryzias latipes]
 gi|67077823|dbj|BAD99513.1| membrane-type matrix metalloproteinase [Oryzias latipes]
          Length = 610

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P    + +  +   V SA+   Q  +GL  +G  D ST+EAM  P     D 
Sbjct: 36  LQQYGYLPPGDLRTHSLRSPHSVSSAIATMQKFYGLTVTGTFDQSTIEAMKRPRCGVPDK 95

Query: 172 RIRQLQVNLMRIKKLLEQKM 191
              +L+ NL R K+   Q +
Sbjct: 96  FGAELKSNLRRRKRYAYQAL 115


>gi|282555154|gb|ADA82673.1| L,D-transpeptidase [endosymbiont of Polyrhachis macropus]
          Length = 309

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 56/186 (30%), Gaps = 45/186 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L    +N    +   + +G +   TP    + + R   NP W IP   I+ 
Sbjct: 100 IIINSAEMRLYFYPKNSNKIIVFPIGIGEIGNNTPFNWVTSVQRKKHNPVW-IPTKKIRD 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           + +                                   +          G  N M    +
Sbjct: 159 EYL----------------------------------IQGTILPKIIASGPHNPMGLYAL 184

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-YHIEEVV 372
                     H T     F   +R  + GC+R+    D+  +L ++ P  +R   I E V
Sbjct: 185 YIGKLYAI--HGTNAN--FGIGLR-ISHGCIRL-RADDI-KYLFQNVPLGTRVQFINEPV 237

Query: 373 KTRKTT 378
           K  +  
Sbjct: 238 KITQEK 243


>gi|256425043|ref|YP_003125696.1| peptidoglycan-binding domain 1 protein [Chitinophaga pinensis DSM
           2588]
 gi|256039951|gb|ACU63495.1| Peptidoglycan-binding domain 1 protein [Chitinophaga pinensis DSM
           2588]
          Length = 260

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
               F   V+ A   FQ +H L P G+V + T
Sbjct: 33  ADGVFSREVQQATITFQQKHNLQPDGVVGNKT 64


>gi|254485842|ref|ZP_05099047.1| Putative peptidoglycan binding domain protein [Roseobacter sp.
           GAI101]
 gi|214042711|gb|EEB83349.1| Putative peptidoglycan binding domain protein [Roseobacter sp.
           GAI101]
          Length = 486

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 34/69 (49%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   N+S ++    ++L+    L      + AFD    +++K +Q+  GL P+G++D + 
Sbjct: 4   LAEPNTSSTIVLEAQKLLNQSALQSRAPENGAFDKSTLNSIKQYQLESGLRPTGILDKTL 63

Query: 162 LEAMNVPVD 170
           L+ +     
Sbjct: 64  LDNLRKSAK 72


>gi|224070919|ref|XP_002187592.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 572

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P   ++        +  A+   Q   GL  +G++D +TLE M  P
Sbjct: 29  LTKFGYLPPPDPVTGQLQTQEELTKAITAMQRFGGLKATGVLDEATLELMKTP 81


>gi|73995001|ref|XP_852332.1| PREDICTED: similar to matrix metalloproteinase 17 preproprotein
           [Canis familiaris]
          Length = 661

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            V  +   L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  
Sbjct: 110 RVAEMEW-LSRFGYLPPADSTTGQLQTQEELSKAIAAMQRFGGLEATGILDVATLALMKT 168

Query: 168 P 168
           P
Sbjct: 169 P 169


>gi|153008815|ref|YP_001370030.1| chitinase-like protein [Ochrobactrum anthropi ATCC 49188]
 gi|151560703|gb|ABS14201.1| chitinase-like protein [Ochrobactrum anthropi ATCC 49188]
          Length = 323

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 11/24 (45%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           ++ FQ   GL   G+    T  A+
Sbjct: 198 IRSFQKAKGLAVDGIAGPRTRSAL 221


>gi|91089485|ref|XP_969495.1| PREDICTED: similar to matrix metalloproteinase [Tribolium
           castaneum]
          Length = 632

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G +D +   + A   +  V  A+K  Q   G+  +G +D  TL+ +N P
Sbjct: 41  LTRFGYMDATADGAFALRTEESVRDAIKDMQEFAGIPVTGRLDERTLKLLNTP 93


>gi|317508155|ref|ZP_07965838.1| hypothetical protein HMPREF9336_02210 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253566|gb|EFV12953.1| hypothetical protein HMPREF9336_02210 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 313

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ S  V  ++  L            S  +D  +++ V   Q+  GL  +G++D +T  A
Sbjct: 2   GDLSPKVADIKAYLRREFPHASGLNYSELYDERLKAVVANIQILLGLPATGVMDYATQRA 61


>gi|220926346|ref|YP_002501648.1| hypothetical protein Mnod_6576 [Methylobacterium nodulans ORS 2060]
 gi|219950953|gb|ACL61345.1| protein of unknown function DUF847 [Methylobacterium nodulans ORS
           2060]
          Length = 191

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 38/113 (33%), Gaps = 33/113 (29%)

Query: 81  AIAFYQDILSRGGW---PELPIRPLHLGNSSV-------------SVQRL---------R 115
           A+A  + +   GGW   P  P  P +LG +                V+ L         R
Sbjct: 9   ALA--RVLAHEGGWSDHPADPGGPTNLGVTQATLSAWLGRPATRAEVKALTPASVAPLYR 66

Query: 116 ERL--IISGDLDPSKGLSVAFDAYVESAVKL----FQMRHGLDPSGMVDSSTL 162
            R    + GD  P+      FD  V S V+      Q   G+   G +   TL
Sbjct: 67  ARFWDAVHGDALPAGVDLAVFDLAVNSGVRRAAMALQRAVGVADDGRIGPMTL 119


>gi|162448546|ref|YP_001610913.1| hypothetical protein sce0276 [Sorangium cellulosum 'So ce 56']
 gi|161159128|emb|CAN90433.1| hypothetical protein sce0276 [Sorangium cellulosum 'So ce 56']
          Length = 885

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           RL   G    +    +  D    ++++ FQ  H L+P+G +D +T
Sbjct: 833 RLKNLGYYRGAGKGEI--DDETRASLRRFQSDHALEPTGELDGAT 875


>gi|307945814|ref|ZP_07661150.1| secretion activator protein [Roseibium sp. TrichSKD4]
 gi|307771687|gb|EFO30912.1| secretion activator protein [Roseibium sp. TrichSKD4]
          Length = 270

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 119 IISGDLDPSKGLSVAFDAYVES----AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
            ++GD  P+      FD  V S    A+K  Q   G  P G++ + TL  +   V+    
Sbjct: 71  AVAGDQLPAGVDYAVFDYAVNSGPRRAIKELQRVVGAKPDGIIGNETLSKVGEAVEA--- 127

Query: 175 QLQVNL--MRIK 184
            + VNL   R++
Sbjct: 128 TVIVNLCEQRMR 139


>gi|282555177|gb|ADA82690.1| L,D-transpeptidase [Candidatus Blochmannia sansabeanus]
          Length = 315

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 63/197 (31%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N     L     N    +   + +G ++  TP             YW+   S+  K 
Sbjct: 102 IVINSAEMRLYYYPANSNTVITLPIAIGTIENATPY------------YWI--TSVKHK- 146

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                +++P ++   N+     K  EV                     G  N M    + 
Sbjct: 147 -----KKNPIWIPTKNMRDEYIKRGEVLPTIF--------------PAGSNNPMGLYALY 187

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-----YHIE 369
                    H T     F   +R  T GC+R+    D+  +L K  P  ++       I+
Sbjct: 188 LGQNYAI--HGTNSN--FGIGLR-VTRGCIRL-RPKDI-EFLFKIVPVGTKVQFINEPIK 240

Query: 370 EVVKTRKTTPVKLATEV 386
             ++T     +++   +
Sbjct: 241 STIETNGMQYLEVHNPL 257


>gi|295094743|emb|CBK83834.1| Putative peptidoglycan binding domain./Stage II sporulation
           protein. [Coprococcus sp. ART55/1]
          Length = 410

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V +L+ +L       P+ G       +      AV+ FQ    L  +
Sbjct: 326 PGYELTIGSSGDKVSQLQRQLARIALNYPAIGTVTVDGVYGQNTADAVRKFQQIFNLPVT 385

Query: 155 GMVDSSTLE 163
           G+ D  T  
Sbjct: 386 GVTDYKTWY 394


>gi|91793495|ref|YP_563146.1| lytic murein transglycosylase [Shewanella denitrificans OS217]
 gi|91715497|gb|ABE55423.1| Lytic murein transglycosylase [Shewanella denitrificans OS217]
          Length = 437

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             ++ L+E+L   G                 + ++ FQ   GL   G    ST  A+ +P
Sbjct: 378 SVIKALQEKLNQLGF--DVGEPDGVLGRNSMAGLQAFQRSKGLIADGYPGQSTFNALGLP 435


>gi|18413635|dbj|BAA82707.2| membrane-type-4 matrix metalloproteinase [Homo sapiens]
          Length = 606

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 59  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 118

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 119 PVLTQARRRRQAPAP 133


>gi|296329732|ref|ZP_06872217.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674129|ref|YP_003865801.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153230|gb|EFG94094.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412373|gb|ADM37492.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 167

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP--- 242
           L +      ++ V+I A +L   +N +V     + VG++  QTPI    I     NP   
Sbjct: 51  LPDPNTIPYHIAVSIGAKTLTLYQNNQVIKTYPIAVGKILTQTPIGEFYIINRQRNPGGP 110

Query: 243 ---YW 244
              YW
Sbjct: 111 FGAYW 115


>gi|304360975|ref|YP_003857157.1| gp26 [Mycobacterium phage LeBron]
 gi|302858244|gb|ADL70993.1| gp26 [Mycobacterium phage LeBron]
          Length = 343

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 10/74 (13%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR----------HGLDP 153
            G+S   V   RE+L           L+  +DA +   +  FQ+R            L  
Sbjct: 14  PGDSGTQVLAAREKLKAKFSYGKHLKLTTLYDAELLPVLVEFQLRTNVQRALTGKQLLRV 73

Query: 154 SGMVDSSTLEAMNV 167
            G++D +T  A+ +
Sbjct: 74  DGILDYATQVALGI 87


>gi|242000886|ref|XP_002435086.1| matrix metalloproteinase, putative [Ixodes scapularis]
 gi|215498416|gb|EEC07910.1| matrix metalloproteinase, putative [Ixodes scapularis]
          Length = 550

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G + P +  + A  +   +  AVK FQ   GL  +G VD+ T   M +P
Sbjct: 5   LEKFGYIAPPRNGTAALRSQQALVDAVKDFQRFAGLRVTGRVDNETATMMQLP 57


>gi|148378889|ref|YP_001253430.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153933529|ref|YP_001383270.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153934554|ref|YP_001386819.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           Hall]
 gi|148288373|emb|CAL82450.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929573|gb|ABS35073.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152930468|gb|ABS35967.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           Hall]
 gi|322805217|emb|CBZ02781.1| protein erfK/srfK precursor [Clostridium botulinum H04402 065]
          Length = 125

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 19/48 (39%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++++N    +L       V     V VG+    TP  + +I     NP
Sbjct: 17  HIIINTQTHTLTLFRGNNVYRTYKVAVGKPSTPTPKGNFKIINRAINP 64


>gi|299069644|emb|CBJ40917.1| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum CMR15]
          Length = 427

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           N++  +++L++RL   G  DP     +  D   ++A++ +Q    L   G    S L  +
Sbjct: 368 NNATDIKQLQQRLADKGY-DPGTIDGLIGDRT-QAAIRAYQKDQHLPQDGYASRSLLARL 425


>gi|239832320|ref|ZP_04680649.1| N-acetylmuramoyl-L-alanine amidase [Ochrobactrum intermedium LMG
           3301]
 gi|239824587|gb|EEQ96155.1| N-acetylmuramoyl-L-alanine amidase [Ochrobactrum intermedium LMG
           3301]
          Length = 268

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           L  G +   V+ L+  L + G       ++  FD   E+ +K FQ         G+ D S
Sbjct: 195 LARGENGQPVEALQSMLALYGY---GIAITGIFDEDTETVIKAFQRHFRPQNVDGVADVS 251

Query: 161 TLEAM 165
           T++ +
Sbjct: 252 TIDTL 256


>gi|154685104|ref|YP_001420265.1| YkuG [Bacillus amyloliquefaciens FZB42]
 gi|154350955|gb|ABS73034.1| YkuG [Bacillus amyloliquefaciens FZB42]
          Length = 761

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 17/43 (39%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
            FD  + +A+  FQ    L   G+    T  ++ V      R+
Sbjct: 239 IFDENMRTALINFQKFSALPADGVAGMQTWASLLVSKGDEDRK 281


>gi|159042720|ref|YP_001531514.1| lytic murein transglycosylase [Dinoroseobacter shibae DFL 12]
 gi|157910480|gb|ABV91913.1| lytic murein transglycosylase [Dinoroseobacter shibae DFL 12]
          Length = 389

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   +++L+++L   G       +     A   +AV+  Q R GL 
Sbjct: 319 GAPVFDAGNPEPGLNDAQMKQLQQKLAARGY--DVGAVDGILGARTRAAVRAEQQRLGLP 376

Query: 153 PS 154
             
Sbjct: 377 AD 378


>gi|54311164|gb|AAH45610.1| MMP17 protein [Homo sapiens]
          Length = 606

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 59  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 118

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 119 PVLTQARRRRQAPAP 133


>gi|224541968|ref|ZP_03682507.1| hypothetical protein CATMIT_01141 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525108|gb|EEF94213.1| hypothetical protein CATMIT_01141 [Catenibacterium mitsuokai DSM
           15897]
          Length = 502

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           N + S+  +   L + G  +P +     F   V  A+K F+  HGL   G++
Sbjct: 421 NVNNSIIVMERLLEVLGY-NPGRTDG-YFSQGVSDALKRFEQDHGLTVDGVL 470


>gi|182701744|ref|ZP_02955106.1| LycA [Clostridium botulinum NCTC 2916]
 gi|182668788|gb|EDT80766.1| LycA [Clostridium botulinum NCTC 2916]
          Length = 54

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 17/49 (34%)

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            LI  G    S G    F     +A+K  Q    L   G+V   T   +
Sbjct: 1   MLINIGYPVGSYGADRVFGNGTVTAIKALQRDCNLSVDGVVGKETWGVL 49


>gi|37589932|gb|AAH40507.2| MMP17 protein [Homo sapiens]
          Length = 606

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 59  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 118

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 119 PVLTQARRRRQAPAP 133


>gi|319899254|ref|YP_004159347.1| peptidoglycan-binding protein [Bartonella clarridgeiae 73]
 gi|319403218|emb|CBI76777.1| peptidoglycan-binding protein [Bartonella clarridgeiae 73]
          Length = 420

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+ RL   GD +      +      + A+K FQ+RHGL+ +G     TL  +
Sbjct: 365 ELQSRLAKLGDYEGEIDGKIG--TASKKAIKAFQLRHGLETNGYPSYETLSHI 415


>gi|304406255|ref|ZP_07387912.1| Peptidoglycan-binding domain 1 protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304344839|gb|EFM10676.1| Peptidoglycan-binding domain 1 protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 434

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 18/78 (23%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLD---------PSKGLSVAFDAYVESAVKLFQMR 148
           P   L  G +  +V  ++      G L+         P    +  FD   E AVK FQ  
Sbjct: 350 PGHELKKGMTDPAVGAMK------GFLNVIRKSYPAIPQLNATDLFDEQTEKAVKKFQEI 403

Query: 149 H--GLD-PSGMVDSSTLE 163
           +   L   +G+V+  T  
Sbjct: 404 NKKKLKVANGIVNEPTWR 421


>gi|112382270|ref|NP_057239.4| matrix metalloproteinase-17 preproprotein [Homo sapiens]
 gi|296439485|sp|Q9ULZ9|MMP17_HUMAN RecName: Full=Matrix metalloproteinase-17; Short=MMP-17; AltName:
           Full=Membrane-type matrix metalloproteinase 4;
           Short=MT-MMP 4; Short=MTMMP4; AltName:
           Full=Membrane-type-4 matrix metalloproteinase;
           Short=MT4-MMP; Short=MT4MMP; Flags: Precursor
          Length = 603

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 56  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 115

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 116 PVLTQARRRRQAPAP 130


>gi|31543257|ref|NP_035976.3| matrix metalloproteinase-17 precursor [Mus musculus]
 gi|30354087|gb|AAH51917.1| Matrix metallopeptidase 17 [Mus musculus]
 gi|148687566|gb|EDL19513.1| matrix metallopeptidase 17 [Mus musculus]
          Length = 578

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 13/86 (15%)

Query: 87  DILSRGG--WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD--AYVESAV 142
            + + GG   P      L LG            L   G L P+   S        +  A+
Sbjct: 31  ALAAHGGCAAPAPRAEDLSLGVEW---------LSRFGYLPPADPASGQLQTQEELSKAI 81

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVP 168
              Q   GL+ +G++D +TL  M  P
Sbjct: 82  TAMQQFGGLETTGILDEATLALMKTP 107


>gi|21624137|dbj|BAA82708.2| membrane-type-4 matrix metalloproteinase [Mus musculus]
          Length = 578

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 13/86 (15%)

Query: 87  DILSRGG--WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD--AYVESAV 142
            + + GG   P      L LG            L   G L P+   S        +  A+
Sbjct: 31  ALAAHGGCAAPAPRAEDLSLGVEW---------LSRFGYLPPADPASGQLQTQEELSKAI 81

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVP 168
              Q   GL+ +G++D +TL  M  P
Sbjct: 82  TAMQQFGGLETTGILDEATLALMKTP 107


>gi|300813344|ref|ZP_07093695.1| excinuclease ABC, A subunit [Peptoniphilus sp. oral taxon 836 str.
            F0141]
 gi|300512487|gb|EFK39636.1| excinuclease ABC, A subunit [Peptoniphilus sp. oral taxon 836 str.
            F0141]
          Length = 1208

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 10/103 (9%)

Query: 142  VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
            +K FQ    +  SG +D+ T EA+    D ++  +  N            G  ++ VN  
Sbjct: 985  IKKFQATMNIPISGTLDNKTKEAL-YNKDYKVWDMVTN--------PPSKGY-WIAVNKS 1034

Query: 202  AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
               L      K   +  V +G    QTP    +I  +  NP W
Sbjct: 1035 RRILTMYMGDKSLGKYPVTLGTSATQTPSGRGKIGNMHKNPAW 1077


>gi|169731509|gb|ACA64881.1| matrix metalloproteinase 24 preproprotein (predicted) [Callicebus
           moloch]
          Length = 595

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           RL   L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 30  RLANWLKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 87


>gi|170759637|ref|YP_001786273.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169406626|gb|ACA55037.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 125

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++++N    +L   ++  V     V VG+    TP  + +I     NP
Sbjct: 17  HIIINTQTHTLTLFKDNNVYKTYKVAVGKPSTPTPKGNFKIINRAINP 64


>gi|146386380|gb|ABQ23978.1| membrane-type 3 matrix metalloproteinase [Oryctolagus cuniculus]
          Length = 122

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P+            ++SA+   Q  +G++ +G V  +T++ M  P
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVGRNTIDWMKKP 99


>gi|148653730|ref|YP_001280823.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
 gi|148572814|gb|ABQ94873.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
          Length = 417

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 43/152 (28%), Gaps = 51/152 (33%)

Query: 204 SLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
           +L A + + K+       VG     +P    ++   + +P                    
Sbjct: 301 TLYAYDKDNKLVASYPTTVGSTATPSPTGTHKVKVKVSDP-------------------- 340

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNT 321
                  N    D  GK+  +                  PG  N +    I         
Sbjct: 341 -------NYTHTDADGKQTVL-----------------PPGPNNPVGRVWIGLDKPSYGI 376

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             H +P+P     + R  ++GC+R+ N   + 
Sbjct: 377 --HGSPDP---ERISRQASAGCIRLTNWDAMA 403


>gi|297693480|ref|XP_002824046.1| PREDICTED: matrix metalloproteinase-17-like, partial [Pongo abelii]
          Length = 181

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 2   LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 61

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 62  PVLTQARRRRQAPAP 76


>gi|114647860|ref|XP_509485.2| PREDICTED: matrix metalloproteinase-17 [Pan troglodytes]
          Length = 604

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 56  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 115

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 116 PVLTQARRRRQAPAP 130


>gi|109128713|ref|XP_001101050.1| PREDICTED: matrix metalloproteinase-15 [Macaca mulatta]
          Length = 669

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 9/96 (9%)

Query: 118 LIISGDLD-PSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  PS+ +S    A  + SA+   Q  +G+  +G++D  T E M  P     D 
Sbjct: 57  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQ 116

Query: 172 RIRQLQVNLMRIKK---LLEQKMGLRYVLVNIPAAS 204
              +++ NL R +K   L  +K    ++  +I   +
Sbjct: 117 FGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYT 152


>gi|307332608|ref|ZP_07611652.1| transcriptional regulator, XRE family [Streptomyces violaceusniger
           Tu 4113]
 gi|306881741|gb|EFN12883.1| transcriptional regulator, XRE family [Streptomyces violaceusniger
           Tu 4113]
          Length = 246

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 27/128 (21%)

Query: 47  IVNDRFD--NFLARVDMGIDSDIPIISKETIAQTE--KAIAFYQ----DILSRGGWPELP 98
             +D  +     A    G+ +  P  +     + +  +  A Y      +LSR GW  + 
Sbjct: 135 PWSDHGNSGKGTAATAHGVFAYQPGKTYPCAVRRKNGQLYAGYSTTRTAVLSRPGWDVVE 194

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES-AVKLFQMRHGLDPSGMV 157
            + L                     L    G     D  + + AVK  Q + GL   G+V
Sbjct: 195 AQCL------------------LDHLGFDPGGVDGVDGEMTTRAVKRLQEKAGLATDGLV 236

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 237 GPQTWKVL 244


>gi|296199747|ref|XP_002747296.1| PREDICTED: matrix metalloproteinase-24 [Callithrix jacchus]
          Length = 595

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           RL   L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 30  RLANWLKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 87


>gi|255019748|ref|ZP_05291825.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
 gi|254970816|gb|EET28301.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
          Length = 358

 Score = 38.3 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 39/152 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++V+IPA  L      + V     V V     +  +  + I +    P W +P++I    
Sbjct: 98  IVVDIPARRLYYFPADRHVVFTYPVGVFLPGWKESLTTTSIIQKFKMPAWNVPKNIH--- 154

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                   ++ F  ++ W             PG  N M    +E
Sbjct: 155 ---------------------AWFEKKFHMDIPWYW----------PPGAENPMGELAME 183

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                  ++H T  P      +R  + GC ++
Sbjct: 184 TGLS-GIFIHGTYHPW--GVGMRA-SQGCFQM 211


>gi|332222943|ref|XP_003260629.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-14-like
           [Nomascus leucogenys]
          Length = 582

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|4826834|ref|NP_004986.1| matrix metalloproteinase-14 preproprotein [Homo sapiens]
 gi|317373419|sp|P50281|MMP14_HUMAN RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
           Full=MMP-X1; AltName: Full=Membrane-type matrix
           metalloproteinase 1; Short=MT-MMP 1; Short=MTMMP1;
           AltName: Full=Membrane-type-1 matrix metalloproteinase;
           Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
 gi|963054|emb|CAA88372.1| membrane-type matrix metalloproteinase 1 [Homo sapiens]
 gi|1127837|gb|AAA83770.1| membrane-type matrix metalloproteinase-1 [Homo sapiens]
 gi|119586641|gb|EAW66237.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_b [Homo
           sapiens]
 gi|168277826|dbj|BAG10891.1| matrix metalloproteinase-14 precursor [synthetic construct]
          Length = 582

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|328542952|ref|YP_004303061.1| N-acetylmuramoyl-L-alanine amidase domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326412698|gb|ADZ69761.1| N-acetylmuramoyl-L-alanine amidase domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 253

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
              G +   V+ L+  L + G       +S  FDA   +AV  FQ     +   G+ D S
Sbjct: 181 FQEGEAGQPVEALQSMLALYGY---DVPISGVFDARTRAAVAAFQRHFRPERVDGIADVS 237

Query: 161 TLEAM 165
           T+  +
Sbjct: 238 TIVTL 242


>gi|254718270|ref|ZP_05180081.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. 83/13]
 gi|265983231|ref|ZP_06095966.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|306838217|ref|ZP_07471070.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. NF 2653]
 gi|264661823|gb|EEZ32084.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|306406697|gb|EFM62923.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. NF 2653]
          Length = 241

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA-STKIEFYSRNNT-Y-MH 324
             N+    +  +     E+    PE   +  RQ+PG  N +       + +  +T Y +H
Sbjct: 142 RANVEYKKQWPRWTPPPEMIQRKPELEKYRNRQEPGPTNPLGARALYIYQNGRDTGYRIH 201

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            +PE       +   +SGC+R+ N
Sbjct: 202 GSPEWWSIGQSM---SSGCIRLMN 222


>gi|332227957|ref|XP_003263157.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-15-like
           [Nomascus leucogenys]
          Length = 753

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 9/96 (9%)

Query: 118 LIISGDLD-PSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  PS+ +S    A  + SA+   Q  +G+  +G++D  T E M  P     D 
Sbjct: 141 LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQ 200

Query: 172 RIRQLQVNLMRIKK---LLEQKMGLRYVLVNIPAAS 204
              +++ NL R +K   L  +K    ++  +I   +
Sbjct: 201 FGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYT 236


>gi|325927923|ref|ZP_08189147.1| hypothetical protein XPE_3188 [Xanthomonas perforans 91-118]
 gi|325541763|gb|EGD13281.1| hypothetical protein XPE_3188 [Xanthomonas perforans 91-118]
          Length = 309

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
             G  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N  
Sbjct: 246 PAGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWD 291


>gi|109082872|ref|XP_001100232.1| PREDICTED: matrix metalloproteinase-14-like [Macaca mulatta]
          Length = 582

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|47564866|ref|ZP_00235910.1| putative peptidoglycan binding domain protein [Bacillus cereus
           G9241]
 gi|47558239|gb|EAL16563.1| putative peptidoglycan binding domain protein [Bacillus cereus
           G9241]
          Length = 592

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V   +  LI +G   P  G    + A V + +K FQ    L  +G+ D  T
Sbjct: 216 LKEGSTGPFVYLFQAALIFNGYDVPFDGK---YSAAVTTQLKQFQNFSLLKATGISDFQT 272

Query: 162 LEAMNVPVDLRIRQ 175
             ++ V      RQ
Sbjct: 273 WASLLVSTGDTERQ 286


>gi|255083567|ref|XP_002508358.1| predicted protein [Micromonas sp. RCC299]
 gi|226523635|gb|ACO69616.1| predicted protein [Micromonas sp. RCC299]
          Length = 294

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 21/54 (38%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           L        V+ L+  L          G +  FD     AVK +Q +HG+  SG
Sbjct: 102 LQQEMRGDEVKELQRFLQEESFFMHRGGPTGHFDRETRDAVKAWQRKHGVVQSG 155


>gi|114652043|ref|XP_001157566.1| PREDICTED: matrix metalloproteinase 14 isoform 2 [Pan troglodytes]
          Length = 545

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|114652041|ref|XP_001157686.1| PREDICTED: matrix metalloproteinase-14 isoform 4 [Pan troglodytes]
          Length = 582

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|804994|emb|CAA58519.1| MT-MMP [Homo sapiens]
 gi|40675475|gb|AAH64803.1| Matrix metallopeptidase 14 (membrane-inserted) [Homo sapiens]
 gi|54781371|gb|AAV40837.1| matrix metalloproteinase 14 (membrane-inserted) [Homo sapiens]
 gi|158256086|dbj|BAF84014.1| unnamed protein product [Homo sapiens]
          Length = 582

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|1495995|emb|CAA62432.1| MT-MMP protein [Homo sapiens]
          Length = 582

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|793763|dbj|BAA05519.1| membrane-type matrix metalloproteinase [Homo sapiens]
          Length = 582

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|327285686|ref|XP_003227564.1| PREDICTED: matrix metalloproteinase-14-like, partial [Anolis
           carolinensis]
          Length = 542

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  DS TL+AM  P     D 
Sbjct: 3   LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLQVTGKSDSETLKAMKRPRCGVPDK 62

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 63  FGAEIKANVRRRR 75


>gi|319406116|emb|CBI79746.1| peptidoglycan-binding protein [Bartonella sp. AR 15-3]
          Length = 418

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+ RL   GD        +      + A+K FQ+RHGL+ +G     TL  +
Sbjct: 365 ELQSRLEKLGDYQGEIDGKIG--TASKKAIKAFQLRHGLEANGYPSYETLSHI 415


>gi|225628550|ref|ZP_03786584.1| lytic murein transglycosylase [Brucella ceti str. Cudo]
 gi|237816592|ref|ZP_04595584.1| lytic murein transglycosylase [Brucella abortus str. 2308 A]
 gi|225616396|gb|EEH13444.1| lytic murein transglycosylase [Brucella ceti str. Cudo]
 gi|237787405|gb|EEP61621.1| lytic murein transglycosylase [Brucella abortus str. 2308 A]
          Length = 429

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 376 ELQTHLKALGYYDGNIDGKIGATSR--AAIEAFQQRNGLEPDGHPSKEVLSVL 426


>gi|118098430|ref|XP_415092.2| PREDICTED: similar to membrane-type-4 matrix metalloproteinase
           [Gallus gallus]
          Length = 592

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P   ++        +  A+   Q   GL+ +G++D +TLE M  P
Sbjct: 50  LTKFGYLPPPDPITGQLQTQEELTKAITAMQRFGGLEATGVLDEATLELMKTP 102


>gi|188583441|ref|YP_001926886.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179346939|gb|ACB82351.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 252

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 21/64 (32%), Gaps = 6/64 (9%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS----GMVDSSTLEAMN 166
           V  ++  L+  G      G   A      +AV  FQ    L       G +   T+ A+ 
Sbjct: 3   VAEIQRALLARGYDLGPSGADNALGRLTIAAVTAFQKAEKL--DILYPGTIGPKTIAALG 60

Query: 167 VPVD 170
           V   
Sbjct: 61  VSAA 64


>gi|302876661|ref|YP_003845294.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|307687336|ref|ZP_07629782.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|302579518|gb|ADL53530.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
          Length = 444

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPS 154
           P  PL +G S   V+ ++  L  IS        + V   +D     AVK FQ    L  S
Sbjct: 328 PGYPLGVGESGEYVKTVQTYLNFISEYYPVIDKIDVNGHYDIKTAIAVKKFQELFSLSGS 387

Query: 155 GMVDSSTLEAM 165
           G+VD +T  ++
Sbjct: 388 GIVDFATWYSI 398


>gi|297698857|ref|XP_002826519.1| PREDICTED: matrix metalloproteinase-15-like [Pongo abelii]
          Length = 669

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 9/96 (9%)

Query: 118 LIISGDLD-PSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  PS+ +S    A  + SA+   Q  +G+  +G++D  T E M  P     D 
Sbjct: 57  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQ 116

Query: 172 RIRQLQVNLMRIKK---LLEQKMGLRYVLVNIPAAS 204
              +++ NL R +K   L  +K    ++  +I   +
Sbjct: 117 FGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYT 152


>gi|291523484|emb|CBK81777.1| Putative peptidoglycan binding domain [Coprococcus catus GD/7]
          Length = 422

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   VQ+++E+L    D     P       +      AV+ FQ    L  +
Sbjct: 338 PGYDLTIGSSGQKVQQMQEQLNRISDNYPAIPKIAADGIYGNQTAEAVRTFQKIFNLPQT 397

Query: 155 GMVDSSTLE 163
           G+ D +T  
Sbjct: 398 GVTDYATWY 406


>gi|227485310|ref|ZP_03915626.1| ErfK/YbiS/YcfS/YnhG family protein [Anaerococcus lactolyticus ATCC
           51172]
 gi|227236770|gb|EEI86785.1| ErfK/YbiS/YcfS/YnhG family protein [Anaerococcus lactolyticus ATCC
           51172]
          Length = 481

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 48/174 (27%), Gaps = 53/174 (30%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +G  Y+ V++    +   ++G+V L + ++ G  +            +          S
Sbjct: 339 DLGSTYIEVDLSRQYMWYYQDGQVVLETPIVSGLPNT-----TKWATNVGVG-------S 386

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I++K     LR D              +    +   + W+             G+     
Sbjct: 387 ILEKASNKTLRGD-------GFDGSRYETPVKYWMPIGWD-------------GEG---- 422

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRF--ETSGCVRVRNIIDLDVWLLKDTP 361
                         HD P    F   + F   + GC  +     +   L    P
Sbjct: 423 -------------FHDAPWRGAFGGAIYFSNGSHGC--LNMPPAMAKKLFDLAP 461


>gi|260836059|ref|XP_002613024.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
 gi|229298407|gb|EEN69033.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
          Length = 494

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 6/57 (10%)

Query: 118 LIISGDLD------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G LD       S       D  V  AV LFQ    L  +G +D  T++ M++P
Sbjct: 28  LTKYGYLDDGMMSKASDMTPTEMDDMVRDAVMLFQEMAHLPMTGRLDEMTMQQMSMP 84


>gi|217976443|ref|YP_002360590.1| hypothetical protein Msil_0248 [Methylocella silvestris BL2]
 gi|217501819|gb|ACK49228.1| hypothetical protein Msil_0248 [Methylocella silvestris BL2]
          Length = 286

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 11/72 (15%)

Query: 105 GNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQM--RHGL-------DP 153
           G+    V  +++ L I G   ++ ++     +      AV  ++   R+ L        P
Sbjct: 28  GDRGQHVALIQQALTILGAGLIEANEITREFYGPSTSRAVLKYKGPPRNILNTELRQTKP 87

Query: 154 SGMVDSSTLEAM 165
             +V   T+  +
Sbjct: 88  DAIVGKRTIAWL 99


>gi|4505211|ref|NP_002419.1| matrix metalloproteinase-15 preproprotein [Homo sapiens]
 gi|1705988|sp|P51511|MMP15_HUMAN RecName: Full=Matrix metalloproteinase-15; Short=MMP-15; AltName:
           Full=Membrane-type matrix metalloproteinase 2;
           Short=MT-MMP 2; Short=MTMMP2; AltName:
           Full=Membrane-type-2 matrix metalloproteinase;
           Short=MT2-MMP; Short=MT2MMP; AltName: Full=SMCP-2;
           Flags: Precursor
 gi|963056|emb|CAA88373.1| membrane-type matrix metalloproteinase 2 [Homo sapiens]
 gi|33585869|gb|AAH55428.1| Matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
 gi|54673588|gb|AAH36495.1| Matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
 gi|116069818|gb|ABJ53423.1| matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
 gi|119603371|gb|EAW82965.1| matrix metallopeptidase 15 (membrane-inserted), isoform CRA_a [Homo
           sapiens]
 gi|119603372|gb|EAW82966.1| matrix metallopeptidase 15 (membrane-inserted), isoform CRA_a [Homo
           sapiens]
 gi|261858710|dbj|BAI45877.1| matrix metallopeptidase 15 [synthetic construct]
          Length = 669

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 9/96 (9%)

Query: 118 LIISGDLD-PSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  PS+ +S    A  + SA+   Q  +G+  +G++D  T E M  P     D 
Sbjct: 57  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQ 116

Query: 172 RIRQLQVNLMRIKK---LLEQKMGLRYVLVNIPAAS 204
              +++ NL R +K   L  +K    ++  +I   +
Sbjct: 117 FGVRVKANLRRRRKRYALTGRKWNNHHLTFSIQNYT 152


>gi|326672700|ref|XP_001342721.4| PREDICTED: matrix metalloproteinase-21-like [Danio rerio]
          Length = 599

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           D    SA++ FQ    L  +G+ D +T  AMN P
Sbjct: 95  DLQFVSALRDFQRLSDLPVTGVFDDATKAAMNKP 128


>gi|317487820|ref|ZP_07946413.1| ykud domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|325830595|ref|ZP_08164016.1| ErfK/YbiS/YcfS/YnhG [Eggerthella sp. HGA1]
 gi|316913095|gb|EFV34611.1| ykud domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|325487341|gb|EGC89783.1| ErfK/YbiS/YcfS/YnhG [Eggerthella sp. HGA1]
          Length = 498

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 188 EQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVD--RQTP 229
            +  G RY+ V++        + +G V   S +I G+ D    TP
Sbjct: 364 SRDWGARYMDVDLSEQHARLYDASGAVIWESDIITGKPDGEHDTP 408


>gi|260757107|ref|ZP_05869455.1| LOW QUALITY PROTEIN: lytic Murein transglycosylase [Brucella
           abortus bv. 6 str. 870]
 gi|260677215|gb|EEX64036.1| LOW QUALITY PROTEIN: lytic Murein transglycosylase [Brucella
           abortus bv. 6 str. 870]
          Length = 300

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 247 ELQTHLKALGYYDGNIDGKIGATSR--AAIEAFQQRNGLEPDGHPSKEVLSVL 297


>gi|220928280|ref|YP_002505189.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Clostridium cellulolyticum H10]
 gi|219998608|gb|ACL75209.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Clostridium cellulolyticum H10]
          Length = 231

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 9/20 (45%)

Query: 142 VKLFQMRHGLDPSGMVDSST 161
           VK FQ   GL   G+    T
Sbjct: 151 VKEFQSMAGLTADGVAGPKT 170


>gi|293604157|ref|ZP_06686565.1| type III effector HopAJ2 [Achromobacter piechaudii ATCC 43553]
 gi|292817382|gb|EFF76455.1| type III effector HopAJ2 [Achromobacter piechaudii ATCC 43553]
          Length = 411

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 32/109 (29%), Gaps = 12/109 (11%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGG-----WPELPIRPLHLGNSSVSVQRLRERLIISGD 123
           + S         AIA   D L   G     WP         G S    + L+  LI  G 
Sbjct: 310 LYSYNAAESYALAIAHLSDRLRGAGPLIQPWPTDD-----PGLSRAERRELQSLLIAKGY 364

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
                   V   A    A+K  Q   GL   G      L+A+      R
Sbjct: 365 EVGEPDGMVG--ARTRQALKAAQESLGLPADGRAGQKALQALRASSAPR 411


>gi|114652047|ref|XP_001157506.1| PREDICTED: matrix metalloproteinase 14 isoform 1 [Pan troglodytes]
          Length = 589

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 46  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 105

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 106 FGAEIKANVRRKR 118


>gi|332687298|ref|YP_004457071.1| hypothetical protein MPTP_1868 [Melissococcus plutonius ATCC 35311]
 gi|332371307|dbj|BAK22262.1| hypothetical protein MPTP_1868 [Melissococcus plutonius ATCC 35311]
          Length = 725

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 8/63 (12%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA-MNVP-------VDLRIRQL 176
             S+ L   +  + + AV+ FQ   GL P G + +  ++A +++         ++R+ Q 
Sbjct: 100 SGSEALDGMYTKFTKEAVEKFQKMAGLSPDGYLSTMLMKALLDMSAFALLGDANIRLMQQ 159

Query: 177 QVN 179
           ++N
Sbjct: 160 ELN 162


>gi|315079336|gb|EFT51337.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL053PA2]
          Length = 343

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK FQ  + L  +G+ D+ TL  
Sbjct: 142 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKGFQRANALKQTGVTDAVTLGL 200

Query: 165 M 165
           +
Sbjct: 201 L 201


>gi|153005694|ref|YP_001380019.1| hypothetical protein Anae109_2835 [Anaeromyxobacter sp. Fw109-5]
 gi|152029267|gb|ABS27035.1| hypothetical protein Anae109_2835 [Anaeromyxobacter sp. Fw109-5]
          Length = 612

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            ++  L +RLI    L P++         ++ A++ +Q +H +   G++D  T  A+
Sbjct: 172 SALAALEQRLICDRLLPPARRTPRW---RLQEALEAYQRKHAIVSWGVLDRETRRAL 225


>gi|261216711|ref|ZP_05930992.1| lytic Murein transglycosylase [Brucella ceti M13/05/1]
 gi|260921800|gb|EEX88368.1| lytic Murein transglycosylase [Brucella ceti M13/05/1]
          Length = 174

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 121 ELQTHLKALGYYDGNIDGKIGATSR--AAIEAFQQRNGLEPDGHPSKEVLSVL 171


>gi|254715008|ref|ZP_05176819.1| Putative peptidoglycan binding domain 1 [Brucella ceti M13/05/1]
          Length = 184

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 131 ELQTHLKALGYYDGNIDGKIGATSR--AAIEAFQQRNGLEPDGHPSKEVLSVL 181


>gi|62317029|ref|YP_222882.1| transglycosylase [Brucella abortus bv. 1 str. 9-941]
 gi|83269023|ref|YP_418314.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis biovar Abortus 2308]
 gi|189022296|ref|YP_001932037.1| Putative peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|254695217|ref|ZP_05157045.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 3
           str. Tulya]
 gi|254698316|ref|ZP_05160144.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254706370|ref|ZP_05168198.1| Putative peptidoglycan binding domain 1 [Brucella pinnipedialis
           M163/99/10]
 gi|254711340|ref|ZP_05173151.1| Putative peptidoglycan binding domain 1 [Brucella pinnipedialis
           B2/94]
 gi|254731759|ref|ZP_05190337.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 4
           str. 292]
 gi|256014866|ref|YP_003104875.1| membrane-bound lytic murein transglycosylase B [Brucella microti
           CCM 4915]
 gi|256030031|ref|ZP_05443645.1| Putative peptidoglycan binding domain 1 [Brucella pinnipedialis
           M292/94/1]
 gi|256158203|ref|ZP_05456112.1| Putative peptidoglycan binding domain 1 [Brucella ceti M490/95/1]
 gi|256252855|ref|ZP_05458391.1| Putative peptidoglycan binding domain 1 [Brucella ceti B1/94]
 gi|256256672|ref|ZP_05462208.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 9
           str. C68]
 gi|260166918|ref|ZP_05753729.1| membrane-bound lytic murein transglycosylase B [Brucella sp. F5/99]
 gi|260544265|ref|ZP_05820086.1| lytic murein transglycosylase [Brucella abortus NCTC 8038]
 gi|260759523|ref|ZP_05871871.1| lytic Murein transglycosylase [Brucella abortus bv. 4 str. 292]
 gi|260762767|ref|ZP_05875099.1| lytic Murein transglycosylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882916|ref|ZP_05894530.1| lytic Murein transglycosylase [Brucella abortus bv. 9 str. C68]
 gi|261215579|ref|ZP_05929860.1| lytic Murein transglycosylase [Brucella abortus bv. 3 str. Tulya]
 gi|261219942|ref|ZP_05934223.1| lytic Murein transglycosylase [Brucella ceti B1/94]
 gi|261313816|ref|ZP_05953013.1| lytic Murein transglycosylase [Brucella pinnipedialis M163/99/10]
 gi|261318943|ref|ZP_05958140.1| lytic Murein transglycosylase [Brucella pinnipedialis B2/94]
 gi|261756303|ref|ZP_06000012.1| lytic Murein transglycosylase [Brucella sp. F5/99]
 gi|265987053|ref|ZP_06099610.1| lytic Murein transglycosylase [Brucella pinnipedialis M292/94/1]
 gi|265996715|ref|ZP_06109272.1| lytic Murein transglycosylase [Brucella ceti M490/95/1]
 gi|294853097|ref|ZP_06793769.1| transglycosylase [Brucella sp. NVSL 07-0026]
 gi|297250027|ref|ZP_06933728.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
 gi|62197222|gb|AAX75521.1| hypothetical transglycosylase [Brucella abortus bv. 1 str. 9-941]
 gi|82939297|emb|CAJ12235.1| Putative peptidoglycan binding domain 1 [Brucella melitensis biovar
           Abortus 2308]
 gi|189020870|gb|ACD73591.1| Putative peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|255997526|gb|ACU49213.1| membrane-bound lytic murein transglycosylase B [Brucella microti
           CCM 4915]
 gi|260097536|gb|EEW81410.1| lytic murein transglycosylase [Brucella abortus NCTC 8038]
 gi|260669841|gb|EEX56781.1| lytic Murein transglycosylase [Brucella abortus bv. 4 str. 292]
 gi|260673188|gb|EEX60009.1| lytic Murein transglycosylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260872444|gb|EEX79513.1| lytic Murein transglycosylase [Brucella abortus bv. 9 str. C68]
 gi|260917186|gb|EEX84047.1| lytic Murein transglycosylase [Brucella abortus bv. 3 str. Tulya]
 gi|260918526|gb|EEX85179.1| lytic Murein transglycosylase [Brucella ceti B1/94]
 gi|261298166|gb|EEY01663.1| lytic Murein transglycosylase [Brucella pinnipedialis B2/94]
 gi|261302842|gb|EEY06339.1| lytic Murein transglycosylase [Brucella pinnipedialis M163/99/10]
 gi|261736287|gb|EEY24283.1| lytic Murein transglycosylase [Brucella sp. F5/99]
 gi|262551012|gb|EEZ07173.1| lytic Murein transglycosylase [Brucella ceti M490/95/1]
 gi|264659250|gb|EEZ29511.1| lytic Murein transglycosylase [Brucella pinnipedialis M292/94/1]
 gi|294818752|gb|EFG35752.1| transglycosylase [Brucella sp. NVSL 07-0026]
 gi|297173896|gb|EFH33260.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
          Length = 412

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 359 ELQTHLKALGYYDGNIDGKIGATSR--AAIEAFQQRNGLEPDGHPSKEVLSVL 409


>gi|321443282|gb|EFX60041.1| hypothetical protein DAPPUDRAFT_125714 [Daphnia pulex]
          Length = 342

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 27/164 (16%)

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSS--VSVQRLRERL 118
             +D+          + ++ A A Y+ +L       + +    LG      +   L + L
Sbjct: 24  AAVDALQLFEKSLAYSDSDDAWARYRQLL-------VVVAEAQLGAKDVPAADVSLSQVL 76

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
            +  D  PS+  + A      +A++  Q R           + LE ++ P   R+     
Sbjct: 77  AVDPDYAPSEPDASAVLVARVAALRQAQKR--------ARPAVLEVLSRPPGARVLVDGR 128

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
              R    ++   G+ YVLV+         + G+      V+VG
Sbjct: 129 AAGRAPVAVDVSPGIHYVLVD---------DEGR-TYSERVVVG 162


>gi|254711939|ref|ZP_05173750.1| Putative peptidoglycan binding domain 1 [Brucella ceti M644/93/1]
 gi|261319579|ref|ZP_05958776.1| lytic Murein transglycosylase [Brucella ceti M644/93/1]
 gi|261292269|gb|EEX95765.1| lytic Murein transglycosylase [Brucella ceti M644/93/1]
          Length = 412

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 359 ELQTHLKALGYYDGNIDGKIGATSR--AAIEAFQQRNGLEPDGHPSKEVLSVL 409


>gi|254699386|ref|ZP_05161214.1| Putative peptidoglycan binding domain 1 [Brucella suis bv. 5 str.
           513]
 gi|261749835|ref|ZP_05993544.1| lytic Murein transglycosylase [Brucella suis bv. 5 str. 513]
 gi|261739588|gb|EEY27514.1| lytic Murein transglycosylase [Brucella suis bv. 5 str. 513]
          Length = 412

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 359 ELQTHLKALGYYDGNIDGKIGATSR--AAIEAFQQRNGLEPDGHPSKEVLSVL 409


>gi|160916038|ref|ZP_02078246.1| hypothetical protein EUBDOL_02066 [Eubacterium dolichum DSM 3991]
 gi|158432514|gb|EDP10803.1| hypothetical protein EUBDOL_02066 [Eubacterium dolichum DSM 3991]
          Length = 169

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 14/86 (16%)

Query: 101 PLHLGNSSVSVQRLRERLIIS---GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           PL +G++ + V +++  L +    G +         F A   +AV+ FQ    L  +G +
Sbjct: 7   PLTIGSTGIGVNKMQAYLNMFQERGLITTKVNQDGDFGAITANAVREFQAYSRLPINGKI 66

Query: 158 DSSTLEAM-----------NVPVDLR 172
           D +T  A+           N+PV  R
Sbjct: 67  DDATWSAIVNKLRELRIITNIPVASR 92


>gi|148558066|ref|YP_001257145.1| putative transglycosylase [Brucella ovis ATCC 25840]
 gi|148369351|gb|ABQ62223.1| putative transglycosylase [Brucella ovis ATCC 25840]
          Length = 412

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 359 ELQTHLKALGYYDGNIDGKIGATSR--AAIEAFQQRNGLEPDGHPSKEVLSVL 409


>gi|27375195|ref|NP_766724.1| hypothetical protein blr0084 [Bradyrhizobium japonicum USDA 110]
 gi|27348331|dbj|BAC45349.1| blr0084 [Bradyrhizobium japonicum USDA 110]
          Length = 462

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           + + +V  +++ L   G   P     ++     ++AV  FQ ++GL  +G++D +T+ A
Sbjct: 206 DIASTVVLMQQALNKLGANPPLAEDGIS-GPKTKAAVSQFQQQNGLRDTGLLDGATVAA 263


>gi|306845309|ref|ZP_07477884.1| lytic murein transglycosylase [Brucella sp. BO1]
 gi|306274225|gb|EFM56037.1| lytic murein transglycosylase [Brucella sp. BO1]
          Length = 412

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 359 ELQTHLKALGYYDGNIDGKIGATSR--AAIEAFQQRNGLEPDGHPSKEVLSVL 409


>gi|332254133|ref|XP_003276184.1| PREDICTED: matrix metalloproteinase-17 [Nomascus leucogenys]
          Length = 607

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 56  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 115

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 116 PVLTQARRRRQAPAP 130


>gi|114652045|ref|XP_001157623.1| PREDICTED: matrix metalloproteinase 14 isoform 3 [Pan troglodytes]
          Length = 600

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|314924447|gb|EFS88278.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL001PA1]
          Length = 343

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ TL  
Sbjct: 142 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTLGL 200

Query: 165 M 165
           +
Sbjct: 201 L 201


>gi|256395739|ref|YP_003117303.1| XRE family transcriptional regulator [Catenulispora acidiphila DSM
           44928]
 gi|256361965|gb|ACU75462.1| transcriptional regulator, XRE family [Catenulispora acidiphila DSM
           44928]
          Length = 239

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 22/64 (34%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +      V  L+  L  +G      G+   F    E AV   Q    LD  G V   T
Sbjct: 176 LQVDMWGAEVAELQCLLQRAGFSPG--GIDGNFGPLTELAVIKAQKADQLDVDGQVGPKT 233

Query: 162 LEAM 165
             A+
Sbjct: 234 WAAL 237


>gi|331082468|ref|ZP_08331594.1| hypothetical protein HMPREF0992_00518 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330400954|gb|EGG80555.1| hypothetical protein HMPREF0992_00518 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 478

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR---VDRQTP 229
           R K   E  +G  YV +++ A  L   ++G V + S  + G      R+TP
Sbjct: 337 RGKAYGENDIGNTYVELDLSAQHLWYYKDGAVLMESDFVSGTYNDKSRRTP 387


>gi|297519881|ref|ZP_06938267.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli OP50]
          Length = 196

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIM 239
           ++ LL        +++NI    L     GK       + +G++  D  TP + + ++   
Sbjct: 91  LQTLLP-DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKR 149

Query: 240 FNPYWVIPRSI 250
            NP W    +I
Sbjct: 150 ANPTWTPTANI 160


>gi|260587962|ref|ZP_05853875.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
 gi|260541489|gb|EEX22058.1| conserved hypothetical protein [Blautia hansenii DSM 20583]
          Length = 486

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR---VDRQTP 229
           R K   E  +G  YV +++ A  L   ++G V + S  + G      R+TP
Sbjct: 345 RGKAYGENDIGNTYVELDLSAQHLWYYKDGAVLMESDFVSGTYNDKSRRTP 395


>gi|17986480|ref|NP_539114.1| protein ERFK/SRFK [Brucella melitensis bv. 1 str. 16M]
 gi|17982080|gb|AAL51378.1| protein erfk/srfk [Brucella melitensis bv. 1 str. 16M]
          Length = 286

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 45/151 (29%), Gaps = 45/151 (29%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           ENGK+ +     +G  D  +                  P  I+Q +    +  +P Y  +
Sbjct: 168 ENGKLVVAYPSTIGSSDNPS------------------PSGIVQVE---RIAINPNYTYN 206

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNTYMHDTP 327
             I+       +V                    PG    + +  I           H TP
Sbjct: 207 PKINFKQGNNDKVLTI----------------PPGPNGPVGTVWIALSKPTYGI--HGTP 248

Query: 328 EPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            P     + +  + GCVR+ N    +L   +
Sbjct: 249 APS---RIGKISSHGCVRLTNWDAEELAKLV 276


>gi|332711897|ref|ZP_08431827.1| hypothetical protein LYNGBM3L_69260 [Lyngbya majuscula 3L]
 gi|332349225|gb|EGJ28835.1| hypothetical protein LYNGBM3L_69260 [Lyngbya majuscula 3L]
          Length = 209

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 28/120 (23%)

Query: 266 LKDNNIHMIDE----KGKEVFVEEVDWNSPEPPNFIFRQ----------------DPGKI 305
           L +  +++           + + +  W +P   NF   Q                 PG  
Sbjct: 89  LSERRVYVYQAAQVLNSYPIAIGKAGWETPT-GNFEVIQKLQDPAWEHPWTGEVIPPGPN 147

Query: 306 NAMAS--TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           N +           +N    H T    L        + GC+R+  +++ DL   +   TP
Sbjct: 148 NPLGDRWIGFWTNGKNYIGFHGTTAEELVGQ---AVSHGCIRMLNKDVRDLFEKVAIGTP 204


>gi|254518309|ref|ZP_05130365.1| ErfK family protein [Clostridium sp. 7_2_43FAA]
 gi|226912058|gb|EEH97259.1| ErfK family protein [Clostridium sp. 7_2_43FAA]
          Length = 464

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
           E  +G  YV +N+ +  L   ++GK+  +  V+ G   +
Sbjct: 337 EDDIGDTYVEINLTSQHLWFYKDGKLIAQGDVVTGDPGK 375


>gi|297272408|ref|XP_002800423.1| PREDICTED: matrix metalloproteinase-28 isoform 2 [Macaca mulatta]
          Length = 510

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER----LIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G      Q LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WDRLDAQPAERGG-----QELRKEAEAFLEKYGYLNEQVPKAPTSTRFS----DAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|42782311|ref|NP_979558.1| hypothetical protein BCE_3256 [Bacillus cereus ATCC 10987]
 gi|42738236|gb|AAS42166.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
          Length = 481

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   + GK+ L + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKEGKLVLTTNVVTGK 385


>gi|282854958|ref|ZP_06264292.1| lipoprotein A-like protein [Propionibacterium acnes J139]
 gi|282582104|gb|EFB87487.1| lipoprotein A-like protein [Propionibacterium acnes J139]
 gi|314967174|gb|EFT11273.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL082PA2]
 gi|314981567|gb|EFT25661.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL110PA3]
 gi|315092330|gb|EFT64306.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL110PA4]
 gi|327328748|gb|EGE70508.1| lipoprotein A family protein [Propionibacterium acnes HL103PA1]
          Length = 343

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ TL  
Sbjct: 142 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTLGL 200

Query: 165 M 165
           +
Sbjct: 201 L 201


>gi|229368716|gb|ACQ62999.1| matrix metalloproteinase 24 preproprotein (predicted), 5 prime
           [Dasypus novemcinctus]
          Length = 245

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 3   LKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 55


>gi|11935132|gb|AAG41981.1| matrix metalloproteinase 28 [Homo sapiens]
          Length = 520

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER----LIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G      Q LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGHLDAQPAERGG-----QELRKEAEAFLEKYGYLNEQVPKAPTSTRF----SDAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|12803593|gb|AAH02631.1| MMP28 protein [Homo sapiens]
 gi|60655721|gb|AAX32424.1| matrix metalloproteinase 28 [synthetic construct]
 gi|119600535|gb|EAW80129.1| matrix metallopeptidase 28, isoform CRA_b [Homo sapiens]
 gi|325464269|gb|ADZ15905.1| matrix metallopeptidase 28 [synthetic construct]
          Length = 393

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER----LIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G      Q LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGHLDAQPAERGG-----QELRKEAEAFLEKYGYLNEQVPKAPTSTRF----SDAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|297272410|ref|XP_001114445.2| PREDICTED: matrix metalloproteinase-28 isoform 1 [Macaca mulatta]
          Length = 520

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER----LIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G      Q LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WDRLDAQPAERGG-----QELRKEAEAFLEKYGYLNEQVPKAPTSTRFS----DAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|224367795|ref|YP_002601958.1| putative general secretion pathway protein A [Desulfobacterium
           autotrophicum HRM2]
 gi|223690511|gb|ACN13794.1| putative general secretion pathway protein A [Desulfobacterium
           autotrophicum HRM2]
          Length = 581

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
              +  L+  L   G       L+  +D  V+ A+   Q  +G+   G+    T 
Sbjct: 508 GSQIINLKLLLKAIGF--QGINLTADYDDRVKQAIIEIQSENGITVDGLAGPMTR 560


>gi|254423629|ref|ZP_05037347.1| ErfK/YbiS/YcfS/YnhG superfamily [Synechococcus sp. PCC 7335]
 gi|196191118|gb|EDX86082.1| ErfK/YbiS/YcfS/YnhG superfamily [Synechococcus sp. PCC 7335]
          Length = 108

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 7/56 (12%)

Query: 301 DPGKINAMAS--TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
            PG  N +            N+   H TP      +V    + GCVR+   ++  L
Sbjct: 42  PPGPYNPLGDRWIAFWTDGTNSIGFHGTPNR---ESVGTAASHGCVRMYNEDVRQL 94


>gi|92113032|ref|YP_572960.1| lytic murein transglycosylase [Chromohalobacter salexigens DSM
           3043]
 gi|91796122|gb|ABE58261.1| Lytic murein transglycosylase [Chromohalobacter salexigens DSM
           3043]
          Length = 430

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 6/75 (8%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +G WP   + PL    S   ++ ++ RL   G         +         ++ +Q   G
Sbjct: 356 QGSWPR-EVEPL----SRTQIKEMQRRLNALGFSTGGSPDGIV-GPNTRKGLRAYQRSQG 409

Query: 151 LDPSGMVDSSTLEAM 165
             P G    + LEA+
Sbjct: 410 AIPDGFPTPALLEAL 424


>gi|315094697|gb|EFT66673.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL060PA1]
          Length = 343

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ TL  
Sbjct: 142 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTLGL 200

Query: 165 M 165
           +
Sbjct: 201 L 201


>gi|260828369|ref|XP_002609136.1| hypothetical protein BRAFLDRAFT_126164 [Branchiostoma floridae]
 gi|229294490|gb|EEN65146.1| hypothetical protein BRAFLDRAFT_126164 [Branchiostoma floridae]
          Length = 778

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           D   + A++ FQ  + L  +G++D +T   MN P
Sbjct: 243 DEEFKEAIRKFQQANNLTITGLLDDATRNKMNEP 276


>gi|78049042|ref|YP_365217.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037472|emb|CAJ25217.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 335

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
             G  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N  
Sbjct: 272 PAGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWD 317


>gi|91782629|ref|YP_557835.1| putative phage-related protein (hydrolase) [Burkholderia xenovorans
           LB400]
 gi|91686583|gb|ABE29783.1| Putative phage-related protein (hydrolase) [Burkholderia xenovorans
           LB400]
          Length = 267

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           NS  SV  L+  L      +P   +        +SA++ FQ R GL  +GMV   T   +
Sbjct: 6   NSGTSVVFLQRTLAQE---NPRLKVDGLSGPDTQSALRRFQQRRGLPDTGMVCEQTRALL 62


>gi|303241052|ref|ZP_07327562.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
           CD2]
 gi|302591477|gb|EFL61215.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
           CD2]
          Length = 143

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG+P +       G+  V V  L++ L   G    +  +   F    +  V  FQ  +G
Sbjct: 60  NGGYPVVAF-----GSVGVYVLILQDALRAIGF--TTTDIDGYFGPITQRTVINFQNSYG 112

Query: 151 LDPSGMVDSSTLEAM 165
           L   G+V   T E +
Sbjct: 113 LVADGIVGCLTWETL 127


>gi|193783707|dbj|BAG53618.1| unnamed protein product [Homo sapiens]
          Length = 510

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER----LIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G      Q LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGHLDAQPAERGG-----QELRKEAEAFLEKYGYLNEQVPKAPTSTRFS----DAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|170756349|ref|YP_001780527.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str.
           Okra]
 gi|169121561|gb|ACA45397.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str.
           Okra]
          Length = 125

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 20/48 (41%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++++N    +L   ++  V     V VG+    TP    +I     NP
Sbjct: 17  HIIINTQTHTLTLFKDNNVYKTYKVAVGKPSTPTPKGTFKIINRAINP 64


>gi|254476194|ref|ZP_05089580.1| Putative peptidoglycan binding domain protein [Ruegeria sp. R11]
 gi|214030437|gb|EEB71272.1| Putative peptidoglycan binding domain protein [Ruegeria sp. R11]
          Length = 424

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            +  ++ +L   G L+     S   DA    A+  FQ    L PSG VD   ++ +    
Sbjct: 280 DIAEVQTQLAALGYLNAPA--SGTLDAATRRAISRFQADQNLVPSGEVDFDLIDRLGEKT 337

Query: 170 DLRIR 174
             R  
Sbjct: 338 ATRQE 342


>gi|325916883|ref|ZP_08179131.1| hypothetical protein XVE_3111 [Xanthomonas vesicatoria ATCC 35937]
 gi|325536928|gb|EGD08676.1| hypothetical protein XVE_3111 [Xanthomonas vesicatoria ATCC 35937]
          Length = 271

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
             G  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N  
Sbjct: 208 PSGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWD 253


>gi|321471531|gb|EFX82503.1| hypothetical protein DAPPUDRAFT_316218 [Daphnia pulex]
          Length = 550

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 9/65 (13%)

Query: 118 LIISGDLDPSKGLSVAFDAYVES-----AVKLFQMRHGLDPSGMVDSSTLEAMNVP---V 169
           L   G L+     S ++   V +     A++ FQ   GL+ +G +D  TLE M+ P   V
Sbjct: 83  LERFGYLERGPQDS-SYSESVSAESFRSAIEDFQSFAGLNKTGEIDKETLELMSKPRCGV 141

Query: 170 DLRIR 174
             R+R
Sbjct: 142 ADRVR 146


>gi|17231318|ref|NP_487866.1| hypothetical protein all3826 [Nostoc sp. PCC 7120]
 gi|17132960|dbj|BAB75525.1| all3826 [Nostoc sp. PCC 7120]
          Length = 241

 Score = 37.9 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 13/169 (7%)

Query: 11  LYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPII 70
           ++C F      +  + V       + +    +   +     F   L  +   +      +
Sbjct: 1   MWCGFGKSSAVIATACVISASFV-ISNTTFADRQRNYTPQEFRTVLRGLGYNVKVTNTPL 59

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELP----IRPLHLGNSSVSVQRLRERLIISGDLDP 126
           S    A+T+KAI+ +Q      G+   P      P     ++  VQ L+  L      +P
Sbjct: 60  SD---AETKKAISEFQK-----GYKLTPVDGIAGPKTQDFAANIVQILQANLNAVLKTNP 111

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                  +    E+A+K FQ +H L+ +G+ + +  + ++      I +
Sbjct: 112 PLPRDQFYGPKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAKKVISK 160


>gi|262194790|ref|YP_003265999.1| hypothetical protein Hoch_1554 [Haliangium ochraceum DSM 14365]
 gi|262078137|gb|ACY14106.1| hypothetical protein Hoch_1554 [Haliangium ochraceum DSM 14365]
          Length = 279

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 1/24 (4%)

Query: 142 VKLFQMRHG-LDPSGMVDSSTLEA 164
           V  FQ  HG L   G++   T  A
Sbjct: 30  VAHFQREHGRLTVDGILGPKTWAA 53


>gi|162456479|ref|YP_001618846.1| putative Rhs element Vgr protein [Sorangium cellulosum 'So ce 56']
 gi|161167061|emb|CAN98366.1| Putative Rhs element Vgr protein [Sorangium cellulosum 'So ce 56']
          Length = 880

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 12/89 (13%)

Query: 87  DILSRGGWP-ELPIRPLHLGNSSVSVQRL---------RERLIISGDLDPSKGLSVAFDA 136
            ++    WP + P  P      +V V  L           RL   G  + +       D 
Sbjct: 788 QLVEITMWPGKYPTGPRKK--WTVRVAALPEATTVEGALRRLKNLGYYEGAIKEDPPADK 845

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              +A+  FQ  H L  SG +D+ T   +
Sbjct: 846 GFRAALAWFQKDHELGESGELDAQTAGEL 874


>gi|50843612|ref|YP_056839.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
           KPA171202]
 gi|289426002|ref|ZP_06427749.1| lipoprotein A-like protein [Propionibacterium acnes SK187]
 gi|289427943|ref|ZP_06429647.1| lipoprotein A-like protein [Propionibacterium acnes J165]
 gi|295131694|ref|YP_003582357.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
 gi|50841214|gb|AAT83881.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
           KPA171202]
 gi|289153545|gb|EFD02259.1| lipoprotein A-like protein [Propionibacterium acnes SK187]
 gi|289158826|gb|EFD07026.1| lipoprotein A-like protein [Propionibacterium acnes J165]
 gi|291377050|gb|ADE00905.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
 gi|313765634|gb|EFS36998.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL013PA1]
 gi|313808349|gb|EFS46816.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL087PA2]
 gi|313810700|gb|EFS48414.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL083PA1]
 gi|313816578|gb|EFS54292.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL059PA1]
 gi|313821110|gb|EFS58824.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL036PA1]
 gi|313824034|gb|EFS61748.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL036PA2]
 gi|313827221|gb|EFS64935.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL063PA1]
 gi|313829657|gb|EFS67371.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL063PA2]
 gi|313831478|gb|EFS69192.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL007PA1]
 gi|313833473|gb|EFS71187.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL056PA1]
 gi|314916618|gb|EFS80449.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL005PA4]
 gi|314918921|gb|EFS82752.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL050PA1]
 gi|314920932|gb|EFS84763.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL050PA3]
 gi|314926923|gb|EFS90754.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL036PA3]
 gi|314931427|gb|EFS95258.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL067PA1]
 gi|314956652|gb|EFT00904.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL027PA1]
 gi|314959530|gb|EFT03632.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL002PA1]
 gi|314968868|gb|EFT12966.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL037PA1]
 gi|314974828|gb|EFT18923.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL053PA1]
 gi|314977845|gb|EFT21939.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL045PA1]
 gi|314979555|gb|EFT23649.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL072PA2]
 gi|314984745|gb|EFT28837.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL005PA1]
 gi|314988398|gb|EFT32489.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL005PA2]
 gi|314990295|gb|EFT34386.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL005PA3]
 gi|315083839|gb|EFT55815.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL027PA2]
 gi|315087248|gb|EFT59224.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL002PA3]
 gi|315089665|gb|EFT61641.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL072PA1]
 gi|315095615|gb|EFT67591.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL038PA1]
 gi|315100299|gb|EFT72275.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL059PA2]
 gi|315102419|gb|EFT74395.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL046PA1]
 gi|315107740|gb|EFT79716.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL030PA1]
 gi|327326672|gb|EGE68460.1| lipoprotein A family protein [Propionibacterium acnes HL096PA3]
 gi|327332934|gb|EGE74666.1| lipoprotein A family protein [Propionibacterium acnes HL096PA2]
 gi|327448639|gb|EGE95293.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL043PA1]
 gi|327449510|gb|EGE96164.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL013PA2]
 gi|327451136|gb|EGE97790.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL043PA2]
 gi|327455754|gb|EGF02409.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL087PA3]
 gi|328757070|gb|EGF70686.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL025PA2]
 gi|328757265|gb|EGF70881.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL087PA1]
 gi|328757453|gb|EGF71069.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL020PA1]
 gi|328761985|gb|EGF75492.1| lipoprotein A family protein [Propionibacterium acnes HL099PA1]
 gi|332676558|gb|AEE73374.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
           266]
          Length = 343

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ TL  
Sbjct: 142 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTLGL 200

Query: 165 M 165
           +
Sbjct: 201 L 201


>gi|314961936|gb|EFT06037.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL002PA2]
          Length = 343

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ TL  
Sbjct: 142 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTLGL 200

Query: 165 M 165
           +
Sbjct: 201 L 201


>gi|313813705|gb|EFS51419.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL025PA1]
 gi|327335339|gb|EGE77049.1| lipoprotein A family protein [Propionibacterium acnes HL097PA1]
          Length = 343

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ TL  
Sbjct: 142 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTLGL 200

Query: 165 M 165
           +
Sbjct: 201 L 201


>gi|313793623|gb|EFS41654.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL110PA1]
 gi|313802934|gb|EFS44145.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL110PA2]
 gi|313839433|gb|EFS77147.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL086PA1]
 gi|314964726|gb|EFT08826.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL082PA1]
 gi|315082422|gb|EFT54398.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL078PA1]
 gi|327455956|gb|EGF02611.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL092PA1]
          Length = 343

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ TL  
Sbjct: 142 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTLGL 200

Query: 165 M 165
           +
Sbjct: 201 L 201


>gi|27382805|ref|NP_774334.1| hypothetical protein blr7694 [Bradyrhizobium japonicum USDA 110]
 gi|27355978|dbj|BAC52959.1| blr7694 [Bradyrhizobium japonicum USDA 110]
          Length = 400

 Score = 37.9 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
               G   ++++I    +   +NG +  RS+V  G     TP+
Sbjct: 71  PLPKGPLQIIISIADQRVSLFDNGALIARSSVSTGMEGHPTPL 113


>gi|308233678|ref|ZP_07664415.1| Peptidoglycan-binding domain 1 protein [Atopobium vaginae DSM
           15829]
          Length = 306

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 12/82 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W EL      +G+              V++L+  L I G           +  + E+AVK
Sbjct: 65  WSELVDASYTMGDRTLYLRLPNFHGNDVKQLQTCLNILGFSCGEADG--YYGVHTEAAVK 122

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            FQ   G    GM    T +A+
Sbjct: 123 EFQESQGSLGDGMAFQDTFDAI 144



 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           + P+  G++  +V+ ++ RL      +D S+     F A    AV  F++ H L  S  V
Sbjct: 1   MNPIREGSTGAAVEDIQSRLTRLDYAIDSSEIKQQHFGASTARAVGKFRLDHNLSLSSDV 60

Query: 158 DSSTLEAM 165
           D      +
Sbjct: 61  DKQMWSEL 68


>gi|328943610|ref|ZP_08241075.1| penicillin-resistant DD-carboxypeptidase [Atopobium vaginae DSM
           15829]
 gi|327491579|gb|EGF23353.1| penicillin-resistant DD-carboxypeptidase [Atopobium vaginae DSM
           15829]
          Length = 312

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 12/82 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W EL      +G+              V++L+  L I G           +  + E+AVK
Sbjct: 71  WSELVDASYTMGDRTLYLRLPNFHGNDVKQLQTCLNILGFSCGEADG--YYGVHTEAAVK 128

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            FQ   G    GM    T +A+
Sbjct: 129 EFQESQGSLGDGMAFQDTFDAI 150



 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRH 149
           +GG+    + P+  G++  +V+ ++ RL      +D S+     F A    AV  F++ H
Sbjct: 3   QGGF----MNPIREGSTGAAVEDIQSRLTRLDYAIDSSEIKQQHFGASTARAVGKFRLDH 58

Query: 150 GLDPSGMVDSSTLEAM 165
            L  S  VD      +
Sbjct: 59  NLSLSSDVDKQMWSEL 74


>gi|304392266|ref|ZP_07374208.1| N-acetylmuramoyl-L-alanine amidase AmiD [Ahrensia sp. R2A130]
 gi|303296495|gb|EFL90853.1| N-acetylmuramoyl-L-alanine amidase AmiD [Ahrensia sp. R2A130]
          Length = 260

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           L  G++   VQ L+  L + G           FD      V+ FQ         G+ D +
Sbjct: 183 LQEGDAGDPVQALQGMLELYGY---GLECGGNFDRKTRDVVEAFQRHFRPKRVDGVADIA 239

Query: 161 TLE 163
           T+ 
Sbjct: 240 TIA 242


>gi|256376604|ref|YP_003100264.1| peptidoglycan-binding domain 1 protein [Actinosynnema mirum DSM
           43827]
 gi|255920907|gb|ACU36418.1| Peptidoglycan-binding domain 1 protein [Actinosynnema mirum DSM
           43827]
          Length = 396

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 11/83 (13%)

Query: 91  RGGWPELPIRPL--------HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           RGG PE+  R L         +G     V+ L++ L+          +  +F       +
Sbjct: 211 RGGTPEVDDRLLFSPACDAVVMGQHDSCVRELQQLLVR---ARARMSVDGSFGPETLRRL 267

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
             FQ+  GL+P G+VD+ T EA+
Sbjct: 268 TAFQVLAGLEPRGVVDAGTREAL 290


>gi|315109341|gb|EFT81317.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL030PA2]
          Length = 328

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ TL  
Sbjct: 127 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTLGL 185

Query: 165 M 165
           +
Sbjct: 186 L 186


>gi|313771652|gb|EFS37618.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL074PA1]
 gi|313818038|gb|EFS55752.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL046PA2]
          Length = 329

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ TL  
Sbjct: 128 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTLGL 186

Query: 165 M 165
           +
Sbjct: 187 L 187


>gi|163852687|ref|YP_001640730.1| lytic murein transglycosylase [Methylobacterium extorquens PA1]
 gi|163664292|gb|ABY31659.1| lytic murein transglycosylase [Methylobacterium extorquens PA1]
          Length = 393

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 7/72 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP    R          ++RL+  L   G     +         +  AV+ +Q+R GL  
Sbjct: 325 WPNGAARL-----DGPGLKRLQAGLAAKGLYAGEQDGRAG--PKLREAVRQYQIREGLPA 377

Query: 154 SGMVDSSTLEAM 165
            G    + LE +
Sbjct: 378 DGYARPALLERL 389


>gi|13236530|ref|NP_077278.1| matrix metalloproteinase-28 isoform 1 preproprotein [Homo sapiens]
 gi|37538314|sp|Q9H239|MMP28_HUMAN RecName: Full=Matrix metalloproteinase-28; Short=MMP-28; AltName:
           Full=Epilysin; Flags: Precursor
 gi|12698338|gb|AAK01480.1|AF219624_1 matrix metalloproteinase-28 precursor [Homo sapiens]
 gi|12698852|gb|AAK01706.1|AF330002_1 matrix metalloprotease MMP25 [Homo sapiens]
 gi|37183092|gb|AAQ89346.1| metalloprotease [Homo sapiens]
 gi|119600534|gb|EAW80128.1| matrix metallopeptidase 28, isoform CRA_a [Homo sapiens]
          Length = 520

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER----LIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G      Q LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGHLDAQPAERGG-----QELRKEAEAFLEKYGYLNEQVPKAPTSTRFS----DAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|326315522|ref|YP_004233194.1| peptidoglycan-binding domain 1 protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372358|gb|ADX44627.1| Peptidoglycan-binding domain 1 protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 574

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ+  GL P G+    TL  +N 
Sbjct: 539 RFQVAQGLVPDGVAGPLTLMLLNR 562


>gi|160895502|ref|YP_001561084.1| peptidoglycan-binding domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361086|gb|ABX32699.1| Peptidoglycan-binding domain 1 protein [Delftia acidovorans SPH-1]
          Length = 344

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 98  PIRPLHLGNSSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    G ++  +  LR   ++L   G    +   S+      ++A++ FQ    L  +
Sbjct: 274 PSQTSAPGANAAGMS-LRAAQQKLNALGYTAGTPDGSMG--KNTQNALREFQRDQSLPQT 330

Query: 155 GMVDSSTLEAM 165
           G +D +T +A+
Sbjct: 331 GRLDRATSQAL 341


>gi|119386794|ref|YP_917849.1| hypothetical protein Pden_4087 [Paracoccus denitrificans PD1222]
 gi|119377389|gb|ABL72153.1| protein of unknown function DUF847 [Paracoccus denitrificans
           PD1222]
          Length = 209

 Score = 37.9 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 16/96 (16%)

Query: 77  QTEKAI--AFYQDILSRGGWPELPIRPLHLGN-SSVSVQRL-RERL--IISGDLDPSKGL 130
            T K I  A Y+       W + PI    L N +   V  + R+     + GD  P+   
Sbjct: 29  ATMKGITFATYRA------WKKRPITKAELRNITDAEVAAIYRQNYWDAVRGDDLPAGLD 82

Query: 131 SVAFDAYVESAVKL----FQMRHGLDPSGMVDSSTL 162
            VAFDA V S V       Q   G+   GM+   T+
Sbjct: 83  LVAFDASVNSGVSRGAKWLQSALGVTADGMIGPQTI 118


>gi|254389922|ref|ZP_05005145.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|326443017|ref|ZP_08217751.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|197703632|gb|EDY49444.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
          Length = 239

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 141 AVKLFQMRHGL-DPSGMVDSSTLEAMNVPVDLRIR 174
           AV+ FQ  HG+   +G     T + MNV    +  
Sbjct: 73  AVRAFQKTHGISPAAGYAGPLTWQVMNVMTQQKAA 107


>gi|153954823|ref|YP_001395588.1| hypothetical protein CKL_2205 [Clostridium kluyveri DSM 555]
 gi|146347681|gb|EDK34217.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 126

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 20/47 (42%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +N  A  L   +NGKV     V VG+    TP    RI     NP
Sbjct: 21  ITINRAARRLTLYKNGKVYKTYPVAVGKSGTPTPAGTFRIINKQINP 67


>gi|166363065|ref|YP_001655338.1| hypothetical protein MAE_03240 [Microcystis aeruginosa NIES-843]
 gi|166085438|dbj|BAG00146.1| hypothetical protein MAE_03240 [Microcystis aeruginosa NIES-843]
          Length = 516

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM----RHGLDPSGMV--DS 159
           N +     +++RL   G        S A +     A+KLFQ     R  L   G +  D+
Sbjct: 282 NRTADKIAVKQRLHSLGYTFVGDPNSAALNTGFILAIKLFQSIIAGRETLGGDGRIDVDN 341

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
           +T + +             N  R + + +    +  +
Sbjct: 342 TTQKWLE----------AANAPRWQTMPDSNPSISLI 368


>gi|163867469|ref|YP_001608668.1| peptidoglycan-binding protein [Bartonella tribocorum CIP 105476]
 gi|161017115|emb|CAK00673.1| peptidoglycan-binding protein [Bartonella tribocorum CIP 105476]
          Length = 418

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 11/74 (14%)

Query: 86  QDILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           + I    G    W   P +PL    +    + L+ RL   G    +    +   +    A
Sbjct: 339 ERIAGHPGLVHDWQR-PFQPL----TFQECKELQSRLSALGYYKGNVDGKIGTASR--KA 391

Query: 142 VKLFQMRHGLDPSG 155
           +K FQ+ HGL  +G
Sbjct: 392 IKAFQLHHGLKANG 405


>gi|45383954|ref|NP_990528.1| matrix metalloproteinase-16 [Gallus gallus]
 gi|1519365|gb|AAB07491.1| membrane type-matrix metalloproteinase [Gallus gallus]
          Length = 608

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|327458105|gb|EGF04760.1| bacterial SH3 domain protein [Propionibacterium acnes HL083PA2]
          Length = 289

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ TL  
Sbjct: 142 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTLGL 200

Query: 165 M 165
           +
Sbjct: 201 L 201


>gi|325924016|ref|ZP_08185599.1| hypothetical protein XGA_4655 [Xanthomonas gardneri ATCC 19865]
 gi|325545510|gb|EGD16781.1| hypothetical protein XGA_4655 [Xanthomonas gardneri ATCC 19865]
          Length = 283

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
             G  N +    I+    +  Y +H TPEP    +V + E+ GCVR+ N  
Sbjct: 220 PSGPNNPVGRVWIDLSKPH--YGLHGTPEPG---HVGKTESHGCVRLTNWD 265


>gi|315104685|gb|EFT76661.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL050PA2]
          Length = 343

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L       P+K + + +     +AVK+FQ  + L  +G+ D+ TL  
Sbjct: 142 GDHNARSKAVQRDLSTLNYF-PAKWVGLPYGPITTNAVKVFQRANALKQTGVTDAITLGL 200

Query: 165 M 165
           +
Sbjct: 201 L 201


>gi|261323654|ref|ZP_05962851.1| lytic Murein transglycosylase [Brucella neotomae 5K33]
 gi|261299634|gb|EEY03131.1| lytic Murein transglycosylase [Brucella neotomae 5K33]
          Length = 399

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 346 ELQTHLKALGYYDGNIDGKIGATSR--AAIEAFQQRNGLEPDGHPSKEVLSIL 396


>gi|238921306|ref|YP_002934821.1| hypothetical protein NT01EI_3450 [Edwardsiella ictaluri 93-146]
 gi|238870875|gb|ACR70586.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 150

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 12/91 (13%)

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
             G  N M    +          H T     F   +R  + GCVR+R+      WL K+ 
Sbjct: 17  PAGPDNPMGLYALYVGRLYAV--HGTNAN--FGIGLR-VSHGCVRLRDPD--IKWLFKNV 69

Query: 361 PTWSRYHI-----EEVVKTRKTTPVKLATEV 386
           P  +R        +  V+   +  +++   +
Sbjct: 70  PIGTRVQFIDEPVKATVEPDGSRYIEVHNPL 100


>gi|219855282|ref|YP_002472404.1| hypothetical protein CKR_1939 [Clostridium kluyveri NBRC 12016]
 gi|219569006|dbj|BAH06990.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 130

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 20/47 (42%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           + +N  A  L   +NGKV     V VG+    TP    RI     NP
Sbjct: 25  ITINRAARRLTLYKNGKVYKTYPVAVGKSGTPTPAGTFRIINKQINP 71


>gi|118590236|ref|ZP_01547639.1| hypothetical protein SIAM614_11998 [Stappia aggregata IAM 12614]
 gi|118437208|gb|EAV43846.1| hypothetical protein SIAM614_11998 [Stappia aggregata IAM 12614]
          Length = 276

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 10/74 (13%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK------GLSVAFDAYVESAVKLFQMR-HGLDP- 153
           L  G+S   V  ++  LI  G   P             +       VK FQ   HG  P 
Sbjct: 24  LGSGSSGHGVHLVQFGLIELGFPMPKSVGGTGLSPDGIYGNETVQKVKEFQRSSHGGPPI 83

Query: 154 --SGMVDSSTLEAM 165
              G V  +T+  +
Sbjct: 84  NDDGAVGRNTMAKL 97


>gi|298292132|ref|YP_003694071.1| lytic murein transglycosylase [Starkeya novella DSM 506]
 gi|296928643|gb|ADH89452.1| lytic murein transglycosylase [Starkeya novella DSM 506]
          Length = 415

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +Q ++ RL  +G LD         +  +  AV  FQ R G++P G      L A+
Sbjct: 358 EIQEVQRRLTRAG-LDTGGTDGRVGNMTM-RAVANFQRRMGVEPDGYAGLDVLAAL 411


>gi|294011303|ref|YP_003544763.1| hypothetical protein SJA_C1-13170 [Sphingobium japonicum UT26S]
 gi|292674633|dbj|BAI96151.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
          Length = 362

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 8/59 (13%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            PG    +    I+    +  Y +H TPEP     + R E+ GC+R+ N     L   +
Sbjct: 299 KPGPNGPVGVVWIDLSKPH--YGIHGTPEP---QTIGRTESHGCIRLTNWDAARLAQMV 352


>gi|313897792|ref|ZP_07831333.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
 gi|312957327|gb|EFR38954.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
          Length = 169

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 5/87 (5%)

Query: 97  LPIRPLHLGNSSVSV---QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           +    L  G+  + V   Q     +   G ++        +    E AV+ +Q    L  
Sbjct: 3   ISTAALKPGSIGIGVNKQQAYLNMMQEKGFINTRNLQDGVYGTRTEQAVREWQRYANLPI 62

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNL 180
            G + + T +++     LR  Q+  N+
Sbjct: 63  DGEIGNDTWDSIVN--KLRDLQIVTNI 87



 Score = 36.4 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 18/37 (48%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   +     + V+ FQ  + L+  G++  +T +A+
Sbjct: 126 PVDGMYGPRTTTMVQQFQYLYDLNIDGVIGKATWDAI 162


>gi|291222645|ref|XP_002731327.1| PREDICTED: GK21871-like [Saccoglossus kowalevskii]
          Length = 535

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P++      D  V  A+K FQ    L  +G++D  T   M +P
Sbjct: 27  LKKYGYLSPNRVK--FGDMEVTQAIKNFQRMTNLKVTGLMDERTKAGMQMP 75


>gi|240140021|ref|YP_002964498.1| putative membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens AM1]
 gi|240009995|gb|ACS41221.1| putative membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens AM1]
          Length = 393

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 7/72 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP    R          ++RL+  L   G     +         +  AV+ +Q+R GL  
Sbjct: 325 WPNGAARL-----DGPGLKRLQAGLAAKGLYGGEQDGRAG--PKLREAVRQYQIREGLPA 377

Query: 154 SGMVDSSTLEAM 165
            G    + LE +
Sbjct: 378 DGYARPALLERL 389


>gi|227879015|ref|ZP_03996910.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01]
 gi|256844233|ref|ZP_05549719.1| periplasmic protease [Lactobacillus crispatus 125-2-CHN]
 gi|256849367|ref|ZP_05554800.1| periplasmic protease [Lactobacillus crispatus MV-1A-US]
 gi|312977013|ref|ZP_07788762.1| peptidoglycan binding domain-containing protein [Lactobacillus
           crispatus CTV-05]
 gi|227861386|gb|EEJ69010.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01]
 gi|256613311|gb|EEU18514.1| periplasmic protease [Lactobacillus crispatus 125-2-CHN]
 gi|256714143|gb|EEU29131.1| periplasmic protease [Lactobacillus crispatus MV-1A-US]
 gi|310896341|gb|EFQ45406.1| peptidoglycan binding domain-containing protein [Lactobacillus
           crispatus CTV-05]
          Length = 380

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             +  ++    +AVK FQ  H L  +G V+ +T E M      
Sbjct: 180 AGTNYYNQATYNAVKNFQRSHHLPATGNVNLATWEKMGFSKKS 222


>gi|120609482|ref|YP_969160.1| peptidoglycan-binding domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120587946|gb|ABM31386.1| Peptidoglycan-binding domain 1 protein [Acidovorax citrulli
           AAC00-1]
          Length = 568

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ+  GL P G+    TL  +N 
Sbjct: 533 RFQVAQGLVPDGVAGPLTLMLLNR 556


>gi|83717816|ref|YP_439539.1| hypothetical protein BTH_II1343 [Burkholderia thailandensis E264]
 gi|83651641|gb|ABC35705.1| gp28 [Burkholderia thailandensis E264]
          Length = 250

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 14/37 (37%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +S  +D   E AV+  Q    L   G+    T   +
Sbjct: 8   DVSHLYDEQTERAVQTLQAAASLVVDGIAGPKTYRVL 44


>gi|332976083|gb|EGK12951.1| N-acetylmuramoyl-L-alanine amidase [Desmospora sp. 8437]
          Length = 310

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 27/76 (35%), Gaps = 5/76 (6%)

Query: 95  PELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHG-- 150
              P R    +G S  +V+ L ERL+  G     K G    F    + A   FQ   G  
Sbjct: 172 KSFPGRSAFQIGKSHPAVKVLGERLVTHGFGSYYKVGPGPTFTEVDKKACAAFQRAQGWS 231

Query: 151 -LDPSGMVDSSTLEAM 165
             D  G     T E +
Sbjct: 232 GSDADGFPGPVTWERL 247


>gi|256059683|ref|ZP_05449878.1| Putative peptidoglycan binding domain 1 [Brucella neotomae 5K33]
          Length = 382

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 329 ELQTHLKALGYYDGNIDGKIGATSR--AAIEAFQQRNGLEPDGHPSKEVLSIL 379


>gi|148560592|ref|YP_001259693.1| hypothetical protein BOV_1796 [Brucella ovis ATCC 25840]
 gi|148371849|gb|ABQ61828.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
          Length = 526

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 44/151 (29%), Gaps = 45/151 (29%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           ENGK+ +     +G  D  +                  P  I+Q +    +  +P Y  +
Sbjct: 408 ENGKLVVAYPSTIGSSDNPS------------------PSGIVQVE---RIAINPNYTYN 446

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNTYMHDTP 327
             I+       +V +                  PG    + +  I           H TP
Sbjct: 447 PKINFKQGNNDKVLII----------------PPGPNGPVGTVWIALSKPTYGI--HGTP 488

Query: 328 EPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            P          + GCVR+ N    +L   +
Sbjct: 489 APSRIGKTS---SHGCVRLTNWDAEELAKLV 516


>gi|291388662|ref|XP_002710873.1| PREDICTED: matrix metalloproteinase 24 [Oryctolagus cuniculus]
          Length = 574

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           R  L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 11  RSWLKSYGYLLPYDARASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 66


>gi|222874548|gb|EEF11679.1| predicted protein [Populus trichocarpa]
          Length = 238

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 98  PIRPLHLGNSSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    G ++  +  LR   ++L   G    +   S+      ++A++ FQ    L  +
Sbjct: 168 PSQTSAPGANAAGMS-LRAAQQKLNALGYTAGTPDGSMG--KNTQNALREFQRDQSLPQT 224

Query: 155 GMVDSSTLEAM 165
           G +D +T +A+
Sbjct: 225 GRLDRATSQAL 235


>gi|224136988|ref|XP_002326995.1| predicted protein [Populus trichocarpa]
 gi|222835310|gb|EEE73745.1| predicted protein [Populus trichocarpa]
          Length = 295

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +  L+      G L       ++  FD   E+A+  +Q + GL  +G +D  TL  +
Sbjct: 1   MSELKRYFHHFGYLPSQDLKSITDIFDDRFETAIVRYQAKLGLQTTGKLDLDTLNQI 57


>gi|153011588|ref|YP_001372802.1| lytic murein transglycosylase [Ochrobactrum anthropi ATCC 49188]
 gi|151563476|gb|ABS16973.1| lytic murein transglycosylase [Ochrobactrum anthropi ATCC 49188]
          Length = 412

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           Q L+  L   G  D +    +   +   +A++ FQ R+GL P G      L  +
Sbjct: 358 QELQTHLKALGYYDGNIDGKIG--STSRAAIEAFQQRNGLQPDGHPSKEVLSVL 409


>gi|21542428|sp|Q9R0S3|MMP17_MOUSE RecName: Full=Matrix metalloproteinase-17; Short=MMP-17; AltName:
           Full=Membrane-type matrix metalloproteinase 4;
           Short=MT-MMP 4; Short=MTMMP4; AltName:
           Full=Membrane-type-4 matrix metalloproteinase;
           Short=MT4-MMP; Short=MT4MMP; Flags: Precursor
 gi|8052272|emb|CAB92315.1| membrane-type-4 matrix metalloproteinase [Mus musculus]
          Length = 578

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 13/86 (15%)

Query: 87  DILSRGG--WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD--AYVESAV 142
            + + GG   P      L LG            L   G L P+   S        +  A+
Sbjct: 31  ALAAHGGCAAPAPRGEDLSLGVEW---------LSRFGYLPPADPASGQLQTQEELSKAI 81

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVP 168
              Q   GL+ +G++D +TL  M  P
Sbjct: 82  TAMQQFGGLETTGILDEATLALMKTP 107


>gi|326917841|ref|XP_003205203.1| PREDICTED: matrix metalloproteinase-16-like [Meleagris gallopavo]
          Length = 609

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|296454225|ref|YP_003661368.1| hypothetical protein BLJ_1081 [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183656|gb|ADH00538.1| hypothetical protein BLJ_1081 [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 372

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 52/165 (31%), Gaps = 33/165 (20%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDM-GIDSDIPIISKETIAQTEKAIAFYQDILS 90
              V   ++N       + ++D+        G  + +P+  K+        I   + +  
Sbjct: 63  TQEVTKGVLNAETRLGASLQYDDASDFAAASGTITQLPVAGKQ--------INTGEQVYE 114

Query: 91  RGGWPELPIRPLHLGNS------------SVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
             G P     PL  G+                V +L + L   G      G    F+   
Sbjct: 115 MDGAPV----PLFHGDRPFWRTIGDGVSDGPDVTQLEQNLQELGFYGGEVG--PHFNWLT 168

Query: 139 ESAVKLFQMRHGLDPSGMVD---SSTLEAMNVPVDLRIRQLQVNL 180
             A++ +Q   GL    +      +T+ A+     +RI    VN 
Sbjct: 169 REAIRQWQRSLGLTGDAVTGTFDPNTV-ALAAAAPIRIT--AVNA 210


>gi|166366413|ref|YP_001658686.1| hypothetical protein MAE_36720 [Microcystis aeruginosa NIES-843]
 gi|166088786|dbj|BAG03494.1| hypothetical protein MAE_36720 [Microcystis aeruginosa NIES-843]
          Length = 417

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 6/74 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL---DPSGMVD 158
           L +G+  + V +L+ +L   G       +   F    + AV+ FQ  H L   + +G+VD
Sbjct: 169 LQVGSQGLQVGQLQAKLNEIGF--NCGRVDKIFGPKTKQAVENFQRDH-LGESEVTGIVD 225

Query: 159 SSTLEAMNVPVDLR 172
             T   +     +R
Sbjct: 226 ERTWNQIMDHPSVR 239


>gi|157961727|ref|YP_001501761.1| lytic murein transglycosylase [Shewanella pealeana ATCC 700345]
 gi|157846727|gb|ABV87226.1| lytic murein transglycosylase [Shewanella pealeana ATCC 700345]
          Length = 396

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V+ L+ +L   G             +     ++ FQ   GL   G  D +T +A+ V
Sbjct: 339 ARVKELQNQLNHLGY--DVGKADGILGSKSVKGLQSFQKSQGLVADGYPDEATFKALKV 395


>gi|13472965|ref|NP_104532.1| hypothetical protein mll3427 [Mesorhizobium loti MAFF303099]
 gi|14023713|dbj|BAB50318.1| mll3427 [Mesorhizobium loti MAFF303099]
          Length = 505

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 46/157 (29%)

Query: 204 SLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            + A + +GK+       +G  D  +P   + I+ +                  + +  D
Sbjct: 371 EVYAYDASGKLVAAYPATIGSADTPSP---TGIHAV------------------SRIALD 409

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNT 321
           P Y  + NI+   ++G+   +  +               PG    + S  I         
Sbjct: 410 PNYTYNPNINF--KQGQNDKILTI--------------PPGPNGPVGSVWIALDKPTYGI 453

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
             H TPEP     + + E+ GCVR+ N    +L   +
Sbjct: 454 --HGTPEPS---KIGKTESHGCVRLTNWDARELAKLV 485


>gi|300694252|ref|YP_003750225.1| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum PSI07]
 gi|299076289|emb|CBJ35602.2| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum PSI07]
          Length = 404

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           N++  +++L++RL   G  DP     +  D   ++A++ +Q    L   G    S L  +
Sbjct: 345 NNATDIKQLQQRLADKGY-DPGTIDGLIGDRT-QTAIRAYQKDQHLPQDGYASRSLLARL 402


>gi|293381123|ref|ZP_06627140.1| NlpC/P60 family protein [Lactobacillus crispatus 214-1]
 gi|290922335|gb|EFD99320.1| NlpC/P60 family protein [Lactobacillus crispatus 214-1]
          Length = 375

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             +  ++    +AVK FQ  H L  +G V+ +T E M      
Sbjct: 175 AGTNYYNQATYNAVKNFQRSHHLPATGNVNLATWEKMGFSKKS 217


>gi|189069202|dbj|BAG35540.1| unnamed protein product [Homo sapiens]
          Length = 582

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L+  G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LLQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|171910699|ref|ZP_02926169.1| hypothetical protein VspiD_05985 [Verrucomicrobium spinosum DSM
           4136]
          Length = 337

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 185 KLLEQ--KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
               +    G   VLV++P   L    NG +  RSTV  G     TP
Sbjct: 45  WWHPEISPSGPIMVLVSVPNQILHVYRNGILIGRSTVSTGAKGHATP 91


>gi|103484506|dbj|BAE94745.1| membrane type-matrix metalloproteinase 16 [Gallus gallus]
          Length = 609

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|294814632|ref|ZP_06773275.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
 gi|294327231|gb|EFG08874.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
          Length = 216

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 141 AVKLFQMRHGL-DPSGMVDSSTLEAMNVPVDLRIR 174
           AV+ FQ  HG+   +G     T + MNV    +  
Sbjct: 50  AVRAFQKTHGISPAAGYAGPLTWQVMNVMTQQKAA 84


>gi|312197181|ref|YP_004017242.1| peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
 gi|311228517|gb|ADP81372.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
          Length = 251

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 13/41 (31%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +      F     +AV+ FQ    L    +V   T   +
Sbjct: 202 PGALSPDGVFGGMTANAVRAFQTAESLAADSVVGQRTWATL 242


>gi|224046469|ref|XP_002199883.1| PREDICTED: matrix metalloproteinase 16 [Taeniopygia guttata]
          Length = 609

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|4126377|dbj|BAA36551.1| Membrane-type matrix metalloproteinase-1 [Capra hircus]
          Length = 582

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 38  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 97

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 98  FGAEIKANVRRKR 110


>gi|81157905|dbj|BAE48203.1| matrix metalloproteinase 9 [Paralichthys olivaceus]
          Length = 267

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 91  RGGWPELPIRPLH---LGNSSVSVQR--LRER-LIISGDLDPSKGLSVAFDAYVESAVKL 144
           + GW  LP+R +     G+   +V    L E  L   G LD               A+K+
Sbjct: 24  QDGW-SLPLRSISVTFPGDILKNVTDTDLAETYLKRFGYLDKMHRSGFQSMVSTAKALKM 82

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVP 168
            Q + GL  +G +D STLEAM  P
Sbjct: 83  MQRQMGLKETGRLDKSTLEAMKQP 106


>gi|296483589|gb|DAA25704.1| matrix metalloproteinase-14 precursor [Bos taurus]
          Length = 582

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 38  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 97

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 98  FGAEIKANVRRKR 110


>gi|261244996|ref|NP_001159653.1| matrix metalloproteinase-14 [Ovis aries]
 gi|256665391|gb|ACV04841.1| membrane-inserted matrix metallopeptidase 14 [Ovis aries]
          Length = 582

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 38  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 97

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 98  FGAEIKANVRRKR 110


>gi|239941513|ref|ZP_04693450.1| hypothetical protein SrosN15_10992 [Streptomyces roseosporus NRRL
           15998]
 gi|239987978|ref|ZP_04708642.1| hypothetical protein SrosN1_11776 [Streptomyces roseosporus NRRL
           11379]
          Length = 432

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 4/68 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGD----LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              G S+  V RL ++L+  G     +     L    D     A +  Q   G    G  
Sbjct: 363 FKPGQSNSHVDRLGKQLVKKGYGKHYVSGPSPLWTEADRRNVEAFQRAQGWRGGAADGYP 422

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 423 GPETWRRL 430


>gi|110331901|gb|ABG67056.1| matrix metalloproteinase 14 preproprotein [Bos taurus]
          Length = 536

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 38  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 97

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 98  FGAEIKANVRRKR 110


>gi|86133683|ref|ZP_01052265.1| conserved hypothetical protein [Polaribacter sp. MED152]
 gi|85820546|gb|EAQ41693.1| conserved hypothetical protein [Polaribacter sp. MED152]
          Length = 217

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L+ G  +  +  ++++L+  G+   +  +   +     +A+K F+ ++ L   G +D  
Sbjct: 153 KLYNGEKNAIIYEVQKKLVEQGE---TVRIDGVYRIETLNAIKAFEEKNNLLADGYLDEL 209

Query: 161 TLEAM 165
           TLE +
Sbjct: 210 TLEWL 214


>gi|153009062|ref|YP_001370277.1| N-acetylmuramoyl-L-alanine amidase [Ochrobactrum anthropi ATCC
           49188]
 gi|151560950|gb|ABS14448.1| N-acetylmuramoyl-L-alanine amidase family 2 [Ochrobactrum anthropi
           ATCC 49188]
          Length = 268

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR-HGLDPSGMVDSS 160
           L  G +   V+ L+  L + G       ++  FD   E+ +K FQ      +  G+ D S
Sbjct: 195 LARGENGQPVEALQSMLALYGY---EIAITGVFDEGTETVIKAFQRHFRTQNVDGVADVS 251

Query: 161 TLEAM 165
           T++ +
Sbjct: 252 TIDTL 256


>gi|292619299|ref|XP_002663942.1| PREDICTED: matrix metalloproteinase-25-like [Danio rerio]
          Length = 573

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    +    +   +E A++  Q   GL  +G +DS TL  MN P
Sbjct: 39  LSRYGYLPPLDPRTGQLQSKDGIERAIREMQRFAGLKETGKLDSDTLTLMNTP 91


>gi|325679969|ref|ZP_08159538.1| ErfK/YbiS/YcfS/YnhG [Ruminococcus albus 8]
 gi|324108407|gb|EGC02654.1| ErfK/YbiS/YcfS/YnhG [Ruminococcus albus 8]
          Length = 603

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTP 229
           +  G  Y  V++ A  L   ENG++ + S  + G     R TP
Sbjct: 470 KDFGDTYFDVDLSAQHLWYYENGEMKMESDFVSGYPSESRNTP 512


>gi|283768499|ref|ZP_06341411.1| C-terminal processing peptidase [Bulleidia extructa W1219]
 gi|283104891|gb|EFC06263.1| C-terminal processing peptidase [Bulleidia extructa W1219]
          Length = 506

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRER-LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P+     +   +S   V +  ++ +   G           F    + AV  FQ + GL+ 
Sbjct: 410 PKFKEGSILKEDSVSEVTKYSQKAMTYLGY--RPGRTDGYFSEQTKKAVLAFQRKEGLEV 467

Query: 154 SGMVDSSTLEAM 165
           +G ++  T  A+
Sbjct: 468 TGTINQKTYGAL 479


>gi|260818326|ref|XP_002604334.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
 gi|229289660|gb|EEN60345.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
          Length = 423

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           V  AV+  Q  +GL  +G+++ +TL A+  P
Sbjct: 2   VAEAVRSVQKSYGLLATGILNPATLAAIRKP 32


>gi|159039235|ref|YP_001538488.1| peptidoglycan binding domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|159039286|ref|YP_001538539.1| peptidoglycan binding domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157918070|gb|ABV99497.1| Peptidoglycan-binding domain 1 protein [Salinispora arenicola
           CNS-205]
 gi|157918121|gb|ABV99548.1| Peptidoglycan-binding domain 1 protein [Salinispora arenicola
           CNS-205]
          Length = 272

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
            G    +    ++ +K FQ   GL   G++   T +A
Sbjct: 229 AGADGLYGPEYQALIKAFQADQGLTRDGLLGRKTWDA 265


>gi|110803522|ref|YP_699813.1| spore cortex-lytic enzyme SleC [Clostridium perfringens SM101]
 gi|110684023|gb|ABG87393.1| spore cortex-lytic enzyme SleC [Clostridium perfringens SM101]
 gi|226844841|gb|ACO87301.1| SleC [Clostridium perfringens]
 gi|226844845|gb|ACO87303.1| SleC [Clostridium perfringens]
          Length = 438

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V+ ++E+L        L P   +   +      AVK FQ    L  +
Sbjct: 329 PGYTLKFGYSGEPVRVIQEQLNAISRAYPLIPKIAVDGKYGPKTREAVKTFQKIFDLPQT 388

Query: 155 GMVDSSTLE 163
           G VD +T  
Sbjct: 389 GEVDYATWY 397


>gi|27806001|ref|NP_776815.1| matrix metalloproteinase-14 precursor [Bos taurus]
 gi|75056123|sp|Q9GLE4|MMP14_BOVIN RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
           Full=Membrane-type matrix metalloproteinase 1;
           Short=MT-MMP 1; Short=MTMMP1; AltName:
           Full=Membrane-type-1 matrix metalloproteinase;
           Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
 gi|11055605|gb|AAG28170.1|AF290429_1 membrane-type matrix metalloprotease 1 [Bos taurus]
          Length = 582

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 38  LQQHGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 97

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 98  FGAEIKANVRRKR 110


>gi|297838805|ref|XP_002887284.1| hypothetical protein ARALYDRAFT_476141 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333125|gb|EFH63543.1| hypothetical protein ARALYDRAFT_476141 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 378

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDP--SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G +   + R+++     G +    S   +  FD  +++AV+L+Q    L+ +G +D+ T+
Sbjct: 53  GQNVEGLYRIKKYFQRFGYIPETFSGNFTDDFDDILKTAVELYQRNFKLNVTGELDAMTI 112

Query: 163 EAMNVP 168
           + + +P
Sbjct: 113 KHIVIP 118


>gi|291390212|ref|XP_002711594.1| PREDICTED: matrix metalloproteinase 15 [Oryctolagus cuniculus]
          Length = 668

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 9/96 (9%)

Query: 118 LIISGDLD-PSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  PS+ +S    A  + SA+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 50  LRLYGYLPQPSRHMSTLRSAQILASALAEMQRFYGIPVTGVLDEETKAWMKRPRCGVPDQ 109

Query: 172 RIRQLQVNLMRIKK---LLEQKMGLRYVLVNIPAAS 204
               ++ NL R +K   L  +K    ++  +I   +
Sbjct: 110 FGVHVKANLRRRRKRYALTGRKWSNNHLTFSIQNYT 145


>gi|262047872|ref|ZP_06020820.1| periplasmic protease [Lactobacillus crispatus MV-3A-US]
 gi|260571816|gb|EEX28389.1| periplasmic protease [Lactobacillus crispatus MV-3A-US]
          Length = 380

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             +  ++    +AVK FQ  H L  +G V+ +T E M      
Sbjct: 180 AGTNYYNQATYNAVKNFQRSHHLPATGNVNLATWEKMGFSKKS 222


>gi|226844843|gb|ACO87302.1| SleC [Clostridium perfringens]
          Length = 438

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V+ ++E+L        L P   +   +      AVK FQ    L  +
Sbjct: 329 PGYTLKFGYSGEPVRVIQEQLNAISRAYPLIPKIAVDGKYGPKTREAVKTFQKIFDLPQT 388

Query: 155 GMVDSSTLE 163
           G VD +T  
Sbjct: 389 GEVDYATWY 397


>gi|4835928|gb|AAD30300.1| MT3-MMP protein [Bos taurus]
          Length = 138

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L PS            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 31  LQKYGYLPPSDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 90

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 91  TRGSSKFNIRRKR 103


>gi|197103006|ref|NP_001124793.1| matrix metalloproteinase-14 precursor [Pongo abelii]
 gi|75070961|sp|Q5RES1|MMP14_PONAB RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; Flags:
           Precursor
 gi|55725913|emb|CAH89736.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLRVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|291441824|ref|ZP_06581214.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291344719|gb|EFE71675.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 256

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
            +   +    +SA + FQ   GL   G+V  +T  A
Sbjct: 218 AVDGRYGPGSDSACRSFQSSKGLSVDGIVGPATWGA 253


>gi|302382909|ref|YP_003818732.1| ErfK/YbiS/YcfS/YnhG family protein [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302193537|gb|ADL01109.1| ErfK/YbiS/YcfS/YnhG family protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 370

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 84/256 (32%), Gaps = 69/256 (26%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V  +   L   G+L       +++   +E   + F +  GL          L A+N 
Sbjct: 168 GPFVATIPTDLAAQGELTA-----LSYRTPLEMLAERFHVTEGL----------LTALNP 212

Query: 168 PVD-LRIRQLQVNLMRIKKLLEQKMGL--RYVLVNIPAASLEAV-ENGKVGLRSTVIVGR 223
            VD  R  Q  +    +  + +Q +      + V+    SL A   +G +       VG 
Sbjct: 213 GVDFARAGQAIL----VPAVADQPLPAAVTRIEVSKGEGSLRAFGADGTLLAFYPATVGS 268

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
             R  P    R+  +                    +  +P Y  D +    D   K+V V
Sbjct: 269 SARPAP--TGRLTVV-------------------GVANEPDYTYDPDRVSYDRGDKKVVV 307

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSG 342
                              G  N + S  IE     +TY +H TPEP     + +  +SG
Sbjct: 308 -----------------PAGPNNPVGSVWIEL--SRDTYGIHGTPEPS---KIAKTASSG 345

Query: 343 CVRVRN--IIDLDVWL 356
           CVR+ N     L   +
Sbjct: 346 CVRLTNWSAEQLAKAV 361


>gi|239933456|ref|ZP_04690409.1| N-acetylmuramoyl-L-alanine amidase [Streptomyces ghanaensis ATCC
           14672]
          Length = 246

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
            +   +    +SA + FQ   GL   G+V  +T  A
Sbjct: 208 AVDGRYGPGSDSACRSFQSSKGLSVDGIVGPATWGA 243


>gi|262198894|ref|YP_003270103.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Haliangium ochraceum DSM 14365]
 gi|262082241|gb|ACY18210.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Haliangium ochraceum DSM 14365]
          Length = 233

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 14/30 (46%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           A++ +  + FQ +HGL   G     T   +
Sbjct: 19  AHLTALTRRFQDQHGLVADGKCGPLTRAVL 48


>gi|281182734|ref|NP_001162479.1| matrix metalloproteinase-24 [Papio anubis]
 gi|297259948|ref|XP_001100890.2| PREDICTED: matrix metalloproteinase-24 [Macaca mulatta]
 gi|164623742|gb|ABY64668.1| matrix metallopeptidase 24 (predicted) [Papio anubis]
          Length = 598

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 38  LKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 90


>gi|254975977|ref|ZP_05272449.1| hypothetical protein CdifQC_11719 [Clostridium difficile QCD-66c26]
 gi|255093365|ref|ZP_05322843.1| hypothetical protein CdifC_12004 [Clostridium difficile CIP 107932]
 gi|255101545|ref|ZP_05330522.1| hypothetical protein CdifQCD-6_12099 [Clostridium difficile
           QCD-63q42]
 gi|255315110|ref|ZP_05356693.1| hypothetical protein CdifQCD-7_12197 [Clostridium difficile
           QCD-76w55]
 gi|255517780|ref|ZP_05385456.1| hypothetical protein CdifQCD-_11761 [Clostridium difficile
           QCD-97b34]
 gi|255650895|ref|ZP_05397797.1| hypothetical protein CdifQCD_11961 [Clostridium difficile
           QCD-37x79]
 gi|306520782|ref|ZP_07407129.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile QCD-32g58]
          Length = 195

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
                F     +AVK  Q R GL   G+V  ST +A
Sbjct: 155 DDDSEFGPATYNAVKSLQGRLGLTRDGIVGRSTWDA 190


>gi|114567173|ref|YP_754327.1| hypothetical protein Swol_1658 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338108|gb|ABI68956.1| hypothetical protein Swol_1658 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 183

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 12/93 (12%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           S+  +A   +  A Y+D      +  + I+ L +      +  L ++      L      
Sbjct: 99  SEPGVAPVRRPRASYRD----EPYSRVNIQLLTIEELDAVIAELIKQ----EYLQQKPAN 150

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
                  + +A+  FQ  H L P+G VD++TL+
Sbjct: 151 E----EELSNALSQFQSDHNLTPTGQVDAATLK 179


>gi|285808600|gb|ADC36119.1| putative lipoprotein [uncultured bacterium 253]
          Length = 273

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
            RL   G    +  +   FD   +SA+  FQ   G   +G +  + L+A+      + R 
Sbjct: 38  RRLSDLGYWTGT--IDGVFDPGTKSALIAFQKWEGRPITGELTPNELQAIRTSAPPKARD 95

Query: 176 -----LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
                ++V+L R   ++    G   VL        + ++ G+  +  
Sbjct: 96  FGYAHIEVDLDRQVLMVVNDAGGVRVLPVATGNEKQFIDEGQESVAH 142


>gi|282882201|ref|ZP_06290840.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus lacrimalis 315-B]
 gi|281297966|gb|EFA90423.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus lacrimalis 315-B]
          Length = 269

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 10/103 (9%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           +K FQ    +  SG +D+ T EA+    D ++  +  N            G  ++ VN  
Sbjct: 46  IKKFQATMNIPISGTLDNKTKEAL-YNKDYKVWDMVTN--------PPSKGY-WIAVNKS 95

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
              L      K   +  V +G    QTP    +I  +  NP W
Sbjct: 96  RRILTMYMGDKSLGKYPVTLGTSATQTPSGRGKIGNMHKNPAW 138


>gi|218673768|ref|ZP_03523437.1| putative hemaglutinin protein [Rhizobium etli GR56]
          Length = 182

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 4/45 (8%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           A   +A+K FQ   G  P G V  +T+ A+      R +Q+   +
Sbjct: 142 AKTVAAIKNFQKSIGQQPDGKVTDATVRAL----LERNKQVAKAI 182


>gi|114764039|ref|ZP_01443278.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114543397|gb|EAU46412.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. HTCC2601]
          Length = 186

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 6/52 (11%)

Query: 298 FRQDPGKINAMA-STKIEFYSRNNTYM--HDTPEPILFNNVVRFETSGCVRV 346
           + Q  G  N +       F +  +TY   H T  P    ++ R  ++GC+R+
Sbjct: 117 YVQPGGPSNPLGARALYLFQNGRDTYFRIHGTTAP---ESIGRSVSNGCIRM 165


>gi|73992282|ref|XP_542973.2| PREDICTED: similar to Matrix metalloproteinase-24 precursor
           (MMP-24) (Membrane-type matrix metalloproteinase 5)
           (MT-MMP 5) (Membrane-type-5 matrix metalloproteinase)
           (MT5-MMP) [Canis familiaris]
          Length = 626

 Score = 37.5 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 66  LKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 118


>gi|324327161|gb|ADY22421.1| hypothetical protein YBT020_15955 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|301054720|ref|YP_003792931.1| hypothetical protein BACI_c31750 [Bacillus anthracis CI]
 gi|300376889|gb|ADK05793.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|296231221|ref|XP_002761064.1| PREDICTED: matrix metalloproteinase-15 [Callithrix jacchus]
          Length = 666

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 6/73 (8%)

Query: 118 LIISGDLD-PSKGLSV-AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  PS+ +S       + SA+   Q  +G+  +G++D  T + M  P     D 
Sbjct: 57  LRLYGYLPQPSRHMSTMRSTQILASALAEMQRFYGIPVTGVLDEETKKWMKRPRCGVPDQ 116

Query: 172 RIRQLQVNLMRIK 184
              +++ NL R +
Sbjct: 117 FGVRVKANLRRRR 129


>gi|228915805|ref|ZP_04079382.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228843847|gb|EEM88919.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|228928265|ref|ZP_04091306.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228831312|gb|EEM76908.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|228934473|ref|ZP_04097308.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228825110|gb|EEM70907.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|228946829|ref|ZP_04109131.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228812816|gb|EEM59135.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|228986302|ref|ZP_04146440.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228773439|gb|EEM21867.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 488

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 361 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 392


>gi|229030907|ref|ZP_04186926.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus AH1271]
 gi|228730401|gb|EEL81362.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus AH1271]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|229092187|ref|ZP_04223368.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus Rock3-42]
 gi|228691178|gb|EEL44942.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus Rock3-42]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|229122746|ref|ZP_04251955.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus 95/8201]
 gi|228660610|gb|EEL16241.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus 95/8201]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|229139846|ref|ZP_04268412.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus BDRD-ST26]
 gi|228643626|gb|EEK99891.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus BDRD-ST26]
          Length = 488

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 361 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 392


>gi|229156814|ref|ZP_04284901.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus ATCC 4342]
 gi|228626734|gb|EEK83474.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus ATCC 4342]
          Length = 488

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 361 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 392


>gi|229173877|ref|ZP_04301415.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus MM3]
 gi|228609515|gb|EEK66799.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus MM3]
          Length = 488

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 361 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 392


>gi|227818557|ref|YP_002822528.1| exported ErfK/YbiS/YhnG family protein [Sinorhizobium fredii
           NGR234]
 gi|227337556|gb|ACP21775.1| putative exported ErfK/YbiS/YhnG family protein [Sinorhizobium
           fredii NGR234]
          Length = 327

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 8/57 (14%)

Query: 303 GKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           G    + S  I+          H TPEP L   V +  + GC+R+ N    +L   +
Sbjct: 266 GPNGPVGSVWIDLTEPTYGI--HGTPEPSL---VDKAGSHGCIRLTNWDAEELAAMV 317


>gi|222096701|ref|YP_002530758.1| hypothetical protein BCQ_3041 [Bacillus cereus Q1]
 gi|221240759|gb|ACM13469.1| conserved hypothetical protein [Bacillus cereus Q1]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|196037760|ref|ZP_03105070.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|196031030|gb|EDX69627.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|196032524|ref|ZP_03099938.1| conserved hypothetical protein [Bacillus cereus W]
 gi|195995275|gb|EDX59229.1| conserved hypothetical protein [Bacillus cereus W]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|196043115|ref|ZP_03110354.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|218904354|ref|YP_002452188.1| hypothetical protein BCAH820_3238 [Bacillus cereus AH820]
 gi|225865151|ref|YP_002750529.1| hypothetical protein BCA_3260 [Bacillus cereus 03BB102]
 gi|229185424|ref|ZP_04312606.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus BGSC 6E1]
 gi|196026599|gb|EDX65267.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|218535071|gb|ACK87469.1| conserved hypothetical protein [Bacillus cereus AH820]
 gi|225787370|gb|ACO27587.1| conserved hypothetical protein [Bacillus cereus 03BB102]
 gi|228598012|gb|EEK55650.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus BGSC 6E1]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|206974539|ref|ZP_03235455.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217960643|ref|YP_002339207.1| hypothetical protein BCAH187_A3259 [Bacillus cereus AH187]
 gi|206747182|gb|EDZ58573.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217064141|gb|ACJ78391.1| conserved hypothetical protein [Bacillus cereus AH187]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|118478503|ref|YP_895654.1| hypothetical protein BALH_2876 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118417728|gb|ABK86147.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
           [Bacillus thuringiensis str. Al Hakam]
          Length = 482

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 355 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 386


>gi|49479514|ref|YP_037312.1| hypothetical protein BT9727_2989 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49331070|gb|AAT61716.1| conserved hypothetical protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 482

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 355 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 386


>gi|49186007|ref|YP_029259.1| hypothetical protein BAS3002 [Bacillus anthracis str. Sterne]
 gi|49179934|gb|AAT55310.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
          Length = 482

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 355 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 386


>gi|52142316|ref|YP_084514.1| hypothetical protein BCZK2927 [Bacillus cereus E33L]
 gi|51975785|gb|AAU17335.1| conserved hypothetical protein [Bacillus cereus E33L]
          Length = 482

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 355 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 386


>gi|47564367|ref|ZP_00235412.1| ErfK/YbiS/YcfS/YnhG family protein, putative [Bacillus cereus
           G9241]
 gi|47558519|gb|EAL16842.1| ErfK/YbiS/YcfS/YnhG family protein, putative [Bacillus cereus
           G9241]
          Length = 416

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 289 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 320


>gi|30263161|ref|NP_845538.1| hypothetical protein BA_3232 [Bacillus anthracis str. Ames]
 gi|47528522|ref|YP_019871.1| hypothetical protein GBAA_3232 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|65320487|ref|ZP_00393446.1| COG1376: Uncharacterized protein conserved in bacteria [Bacillus
           anthracis str. A2012]
 gi|165868395|ref|ZP_02213055.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167631714|ref|ZP_02390041.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|167637176|ref|ZP_02395456.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170684722|ref|ZP_02875947.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|170705220|ref|ZP_02895685.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|177650013|ref|ZP_02933014.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|227813976|ref|YP_002813985.1| hypothetical protein BAMEG_1382 [Bacillus anthracis str. CDC 684]
 gi|229600377|ref|YP_002867428.1| hypothetical protein BAA_3279 [Bacillus anthracis str. A0248]
 gi|254685764|ref|ZP_05149623.1| hypothetical protein BantC_18170 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723173|ref|ZP_05184961.1| hypothetical protein BantA1_11949 [Bacillus anthracis str. A1055]
 gi|254738234|ref|ZP_05195937.1| hypothetical protein BantWNA_24004 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254742598|ref|ZP_05200283.1| hypothetical protein BantKB_16567 [Bacillus anthracis str. Kruger
           B]
 gi|254752549|ref|ZP_05204585.1| hypothetical protein BantV_08776 [Bacillus anthracis str. Vollum]
 gi|254761065|ref|ZP_05213089.1| hypothetical protein BantA9_22376 [Bacillus anthracis str.
           Australia 94]
 gi|30257795|gb|AAP27024.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gi|47503670|gb|AAT32346.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|164715121|gb|EDR20638.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167514683|gb|EDR90049.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|167532012|gb|EDR94648.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|170130075|gb|EDS98937.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|170670982|gb|EDT21720.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|172083965|gb|EDT69024.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|227003829|gb|ACP13572.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
 gi|229264785|gb|ACQ46422.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|83943814|ref|ZP_00956272.1| peptidoglycan-binding protein, putative [Sulfitobacter sp. EE-36]
 gi|83845494|gb|EAP83373.1| peptidoglycan-binding protein, putative [Sulfitobacter sp. EE-36]
          Length = 375

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 36/133 (27%), Gaps = 17/133 (12%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIA--QTEKAIAFYQ-------------DILSRG 92
                    A     +    P       A     KAI  Y              D ++ G
Sbjct: 244 WGAEMGTAAASSATPVQILQPDAGGPRFAIFNNFKAIKRYNNSDNYAIGVGHLSDRIAGG 303

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G  +    P   G +    + L+ERL   G    + G           A+  +Q   GL 
Sbjct: 304 GPIQASFGPDKYGLTIDDRKALQERLTARGF--DTDGTDGVIGPNSRKAITAYQQSQGLP 361

Query: 153 PSGMVDSSTLEAM 165
            +G      L  +
Sbjct: 362 ATGDPSRELLARL 374


>gi|47523560|ref|NP_999404.1| matrix metalloproteinase-14 precursor [Sus scrofa]
 gi|11386723|sp|Q9XT90|MMP14_PIG RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
           Full=Membrane-type matrix metalloproteinase 1;
           Short=MT-MMP 1; Short=MTMMP1; AltName:
           Full=Membrane-type-1 matrix metalloproteinase;
           Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
 gi|5051632|gb|AAD38324.1|AF067419_1 membrane-type 1 matrix metalloproteinase [Sus scrofa]
          Length = 580

 Score = 37.5 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 37  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 96

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 97  FGAEIKANVRRKR 109


>gi|296219419|ref|XP_002755837.1| PREDICTED: matrix metalloproteinase-25 [Callithrix jacchus]
          Length = 685

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P         +   +  A+K+ Q   GL  +G++D  T+  M  P       
Sbjct: 43  LTRYGYLPPPDPAQAQLQSPEKLSDAIKVMQRFAGLPETGLMDPRTVATMRKPRCSLPDV 102

Query: 176 LQVN-LMRIKK 185
           L V  L+R ++
Sbjct: 103 LGVAGLVRRRR 113


>gi|228908955|ref|ZP_04072785.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis IBL 200]
 gi|228850677|gb|EEM95501.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis IBL 200]
          Length = 498

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|228959430|ref|ZP_04121120.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228800264|gb|EEM47191.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 498

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|228940285|ref|ZP_04102856.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228973201|ref|ZP_04133790.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982220|ref|ZP_04142506.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis Bt407]
 gi|228777507|gb|EEM25788.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis Bt407]
 gi|228786397|gb|EEM34387.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228819411|gb|EEM65465.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 498

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|229051665|ref|ZP_04195134.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus AH676]
 gi|228721698|gb|EEL73173.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus AH676]
          Length = 498

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|229070679|ref|ZP_04203915.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus F65185]
 gi|228712446|gb|EEL64385.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus F65185]
          Length = 498

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|229128488|ref|ZP_04257467.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus BDRD-Cer4]
 gi|228654991|gb|EEL10850.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus BDRD-Cer4]
          Length = 498

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|229145792|ref|ZP_04274172.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus BDRD-ST24]
 gi|228637623|gb|EEK94073.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus BDRD-ST24]
          Length = 498

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|229151389|ref|ZP_04279592.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus m1550]
 gi|228631932|gb|EEK88558.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus m1550]
          Length = 498

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|218230979|ref|YP_002367930.1| hypothetical protein BCB4264_A3224 [Bacillus cereus B4264]
 gi|218158936|gb|ACK58928.1| conserved hypothetical protein [Bacillus cereus B4264]
          Length = 498

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|83375894|gb|ABC17785.1| matrix metalloproteinase 24 variant [Homo sapiens]
          Length = 593

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 33  LKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 85


>gi|83955291|ref|ZP_00963946.1| peptidoglycan-binding protein, putative [Sulfitobacter sp.
           NAS-14.1]
 gi|83840284|gb|EAP79458.1| peptidoglycan-binding protein, putative [Sulfitobacter sp.
           NAS-14.1]
          Length = 372

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 36/133 (27%), Gaps = 17/133 (12%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIA--QTEKAIAFYQ-------------DILSRG 92
                    A     +    P       A     KAI  Y              D ++ G
Sbjct: 241 WGAEMGTAAASSATPVQILQPDAGGPRFAIFNNFKAIKRYNNSDNYAIGVGHLSDRIAGG 300

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G  +    P   G +    + L+ERL   G    + G           A+  +Q   GL 
Sbjct: 301 GPIQASFGPDKYGLTIDDRKALQERLTARGF--DTDGTDGVIGPNSRKAITAYQQSQGLP 358

Query: 153 PSGMVDSSTLEAM 165
            +G      L  +
Sbjct: 359 ATGDPSRELLARL 371


>gi|296503721|ref|YP_003665421.1| hypothetical protein BMB171_C2891 [Bacillus thuringiensis BMB171]
 gi|296324773|gb|ADH07701.1| hypothetical protein BMB171_C2891 [Bacillus thuringiensis BMB171]
          Length = 481

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 385


>gi|212635639|ref|YP_002312164.1| membrane-bound lytic transglycolase-like protein [Shewanella
           piezotolerans WP3]
 gi|212557123|gb|ACJ29577.1| Membrane-bound lytic transglycolase-like protein [Shewanella
           piezotolerans WP3]
          Length = 396

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 97  LPIRPLH-LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           L ++P      S   V+ L+ +L   G  D  K   +     +   ++ FQ  +GL   G
Sbjct: 326 LNVKPPKMPNLSRARVKALQSQLNALGF-DVGKPDGILGSKSL-KGLQAFQKGNGLVADG 383

Query: 156 MVDSSTLEAMNV 167
             + +T +A+ V
Sbjct: 384 YPNEATFKALGV 395


>gi|166831586|gb|ABY90111.1| matrix metalloproteinase 24 preproprotein (predicted) [Callithrix
           jacchus]
          Length = 564

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 4   LKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 56


>gi|122889873|emb|CAM13979.1| matrix metalloproteinase 16 [Mus musculus]
 gi|123229797|emb|CAM18849.1| matrix metalloproteinase 16 [Mus musculus]
          Length = 127

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|218681755|ref|ZP_03529530.1| Peptidoglycan-binding domain 1 protein [Rhizobium etli CIAT 894]
          Length = 225

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   +++ ++  L  +G  D          A   +A+K FQ   G +P G V  +T++A+
Sbjct: 157 DMKKAIRNIQAILNNNGF-DAGAPDGEM-GAKTVTAIKSFQKSIGQEPDGKVTDATVKAL 214


>gi|149579401|ref|XP_001519031.1| PREDICTED: similar to matrix metalloproteinase 28 [Ornithorhynchus
           anatinus]
          Length = 421

 Score = 37.5 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 7/54 (12%)

Query: 118 LIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L           +FD     AV+ FQ    L  SG++D++TL  M  P
Sbjct: 61  LGRYGYLRERVGEAPSPESFD----DAVREFQWTARLPVSGVLDAATLRQMKRP 110


>gi|326940926|gb|AEA16822.1| hypothetical protein CT43_CH3151 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 481

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 385


>gi|228901710|ref|ZP_04065883.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis IBL
           4222]
 gi|228857939|gb|EEN02426.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis IBL
           4222]
          Length = 498

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|228921867|ref|ZP_04085180.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837792|gb|EEM83120.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 498

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|228953495|ref|ZP_04115540.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228806234|gb|EEM52808.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 498

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|228966135|ref|ZP_04127198.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228793620|gb|EEM41160.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 498

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|218898274|ref|YP_002446685.1| hypothetical protein BCG9842_B2030 [Bacillus cereus G9842]
 gi|218545295|gb|ACK97689.1| conserved hypothetical protein [Bacillus cereus G9842]
          Length = 481

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 385


>gi|30021313|ref|NP_832944.1| hypothetical protein BC3203 [Bacillus cereus ATCC 14579]
 gi|29896867|gb|AAP10145.1| hypothetical Exported Protein [Bacillus cereus ATCC 14579]
          Length = 498

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|229012411|ref|ZP_04169587.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus mycoides DSM 2048]
 gi|228748862|gb|EEL98711.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus mycoides DSM 2048]
          Length = 488

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 361 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 392


>gi|229134053|ref|ZP_04262873.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus BDRD-ST196]
 gi|228649388|gb|EEL05403.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus BDRD-ST196]
          Length = 488

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 361 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 392


>gi|229179478|ref|ZP_04306831.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus 172560W]
 gi|228603979|gb|EEK61447.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus 172560W]
          Length = 498

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|167745359|ref|ZP_02417486.1| hypothetical protein ANACAC_00050 [Anaerostipes caccae DSM 14662]
 gi|317473097|ref|ZP_07932396.1| peptidoglycan binding domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|167655080|gb|EDR99209.1| hypothetical protein ANACAC_00050 [Anaerostipes caccae DSM 14662]
 gi|316899435|gb|EFV21450.1| peptidoglycan binding domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 411

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G++   V++++E+L  I+ D    P+  +   +      AV++FQ   GL  +
Sbjct: 326 PGYDLTIGSTGDKVRQMQEQLNRIAKDYPSIPTIPVDGTYGQQTADAVRVFQNVFGLGQT 385

Query: 155 GMVDSSTLE 163
           G+VD  T  
Sbjct: 386 GVVDYPTWY 394


>gi|5729929|ref|NP_006681.1| matrix metalloproteinase-24 preproprotein [Homo sapiens]
 gi|332858203|ref|XP_003316927.1| PREDICTED: matrix metalloproteinase-24 [Pan troglodytes]
 gi|12585280|sp|Q9Y5R2|MMP24_HUMAN RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
           Full=Membrane-type matrix metalloproteinase 5;
           Short=MT-MMP 5; Short=MTMMP5; AltName:
           Full=Membrane-type-5 matrix metalloproteinase;
           Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
           Full=Processed matrix metalloproteinase-24; Flags:
           Precursor
 gi|5381386|gb|AAD42962.1|AF131284_1 membrane type 5 matrix metalloproteinase [Homo sapiens]
 gi|5689367|dbj|BAA82967.1| membrane-type-5 matrix metalloproteinase [Homo sapiens]
 gi|220675561|emb|CAX12722.1| matrix metallopeptidase 24 (membrane-inserted) [Homo sapiens]
 gi|225000844|gb|AAI72450.1| Matrix metallopeptidase 24 (membrane-inserted) [synthetic
           construct]
          Length = 645

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 85  LKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 137


>gi|163940877|ref|YP_001645761.1| hypothetical protein BcerKBAB4_2947 [Bacillus weihenstephanensis
           KBAB4]
 gi|163863074|gb|ABY44133.1| conserved hypothetical protein [Bacillus weihenstephanensis KBAB4]
          Length = 481

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 385


>gi|312376438|gb|EFR23519.1| hypothetical protein AND_12716 [Anopheles darlingi]
          Length = 1009

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 21/91 (23%)

Query: 188 EQKMGLRYVLVNIPAASL-----------EAVEN--GKVGLRSTVIVGRVDRQTPILHSR 234
              +    +  N+    L             + +  G       +IV   D+ T    S 
Sbjct: 618 PNPLCQPKITENLATFELSLKNIYDCGVTRVINHITGNKVFYHRIIVEEEDQNTSSSSSS 677

Query: 235 --------INRIMFNPYWVIPRSIIQKDMMA 257
                   +  ++ NP + +P  I+++D++ 
Sbjct: 678 SSSKEVVSVKCMLANPEFNVPHGIVKRDILP 708


>gi|315498862|ref|YP_004087666.1| n-acetylmuramyl-l-alanine amidase, negative regulator of ampc, ampd
           [Asticcacaulis excentricus CB 48]
 gi|315416874|gb|ADU13515.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Asticcacaulis excentricus CB 48]
          Length = 245

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 17/95 (17%)

Query: 80  KAIAFYQDILSRGGW--PELPIR-----PLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           +A+A        G W  P +P       PL +G++   V  L+  L   G          
Sbjct: 147 QALAE----AGHGLWVDPPVPPEGVMGPPLDIGDTGPGVFALQGALGKLGY---DILPGG 199

Query: 133 AFDAYVESAVKLFQMRHGLDP--SGMVDSSTLEAM 165
            +DA  ++ +  FQ RH +     G  D+ T   +
Sbjct: 200 PYDAETQAIITAFQ-RHWVQTRIDGKADALTRVRL 233


>gi|229110645|ref|ZP_04240210.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus Rock1-15]
 gi|228672818|gb|EEL28097.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus Rock1-15]
          Length = 498

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|229060804|ref|ZP_04198159.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus AH603]
 gi|228718451|gb|EEL70083.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus AH603]
          Length = 488

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 361 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 392


>gi|229164832|ref|ZP_04292655.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus R309803]
 gi|228618623|gb|EEK75626.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus R309803]
          Length = 488

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 361 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 392


>gi|229170823|ref|ZP_04298437.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus AH621]
 gi|228612661|gb|EEK69870.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus AH621]
          Length = 488

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 361 GDTYAEVSIADQQIWIYKDGKLVVTTNVVTGK 392


>gi|29126959|gb|AAH47614.1| MMP24 protein [Homo sapiens]
          Length = 626

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 66  LKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 118


>gi|284041696|ref|YP_003392036.1| peptidoglycan-binding protein [Conexibacter woesei DSM 14684]
 gi|283945917|gb|ADB48661.1| Peptidoglycan-binding domain 1 protein [Conexibacter woesei DSM
           14684]
          Length = 605

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 96  ELPI-RPLHLG-NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            +P  R L  G +    V++L + L   G       +   F +    AV+ +Q    L  
Sbjct: 126 TVPAWRTLKEGIDDGEDVRQLEQNLAALGY--DPGTVDDDFTSSTADAVERWQDAWDLKE 183

Query: 154 SGMV 157
           +G V
Sbjct: 184 TGEV 187


>gi|260467165|ref|ZP_05813343.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259029089|gb|EEW30387.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 505

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 53/157 (33%), Gaps = 46/157 (29%)

Query: 204 SLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            + A +  GK+       +G  D  +P   + I+ +                  + +  D
Sbjct: 371 EVYAYDAGGKLVAAYPATIGSADTPSP---TGIHTV------------------SRIALD 409

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNT 321
           P Y  + NI+   ++G+   +  +               PG    + S  I         
Sbjct: 410 PNYTYNPNINF--KQGQNDKILTI--------------PPGPNGPVGSVWIALDKPTYGI 453

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
             H TPEP     + + E+ GCVR+ N    +L   +
Sbjct: 454 --HGTPEPS---KIGKTESHGCVRLTNWDARELAKLV 485


>gi|229083087|ref|ZP_04215491.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus Rock4-2]
 gi|228700245|gb|EEL52827.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus Rock4-2]
          Length = 498

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|206968878|ref|ZP_03229833.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|206735919|gb|EDZ53077.1| conserved hypothetical protein [Bacillus cereus AH1134]
          Length = 481

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 354 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 385


>gi|47212180|emb|CAF95128.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 351

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P   ++        +  A++  Q   GL  +G+ D  TL  M  P
Sbjct: 3   LSRFGYLPPPDPVTGQLQTQEALTQAIRAMQRFGGLKETGIFDQDTLLLMGTP 55


>gi|229191289|ref|ZP_04318276.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus ATCC 10876]
 gi|228592206|gb|EEK50038.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus ATCC 10876]
          Length = 498

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           G  Y  V+I    +   ++GK+ + + V+ G+
Sbjct: 371 GDTYAEVSIAEQQIWIYKDGKLVVTTNVVTGK 402


>gi|154502780|ref|ZP_02039840.1| hypothetical protein RUMGNA_00594 [Ruminococcus gnavus ATCC 29149]
 gi|153796663|gb|EDN79083.1| hypothetical protein RUMGNA_00594 [Ruminococcus gnavus ATCC 29149]
          Length = 514

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPI 230
           EQ  G  ++ V++    +  +++G V + + V+ G    +R TP 
Sbjct: 378 EQDWGTTFIEVDLSTQHMWYIKDGSVAMETDVVTGVPVPERITPE 422


>gi|134097608|ref|YP_001103269.1| CHAD domain-containing protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|291008473|ref|ZP_06566446.1| CHAD domain-containing protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|133910231|emb|CAM00344.1| CHAD domain containing protein [Saccharopolyspora erythraea NRRL
           2338]
          Length = 309

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 20/131 (15%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAF-YQDILSRGGWPELPIR 100
           E   ++ +DR+   +  +   + S++P    +   +  + +   Y+ +    G       
Sbjct: 148 ELLAALDSDRYMTLVQSLAAAVRSELPGSDLDGPDELRRLVDKEYRKLRKAVG------- 200

Query: 101 PLHLGN--SSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
              LG+  S   +  LR   +RL  + +L  S          +  A K FQ   G     
Sbjct: 201 --KLGDDPSDEELHALRIRGKRLRYTAELAESALDV----KPLLKAAKRFQDVLGEHQDA 254

Query: 156 -MVDSSTLEAM 165
            +      + +
Sbjct: 255 CVAGQRLRDLL 265


>gi|330824901|ref|YP_004388204.1| lytic murein transglycosylase [Alicycliphilus denitrificans K601]
 gi|329310273|gb|AEB84688.1| lytic murein transglycosylase [Alicycliphilus denitrificans K601]
          Length = 442

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 7/75 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP    R L   + S  V+ L+E L   G LD      VA      + V+ +Q   GL  
Sbjct: 375 WP----RDLQPLSRS-DVKTLQELLNARG-LDAGTPDGVA-GPATRAGVRRYQQSLGLPA 427

Query: 154 SGMVDSSTLEAMNVP 168
            G      L+ +  P
Sbjct: 428 DGYATRELLQQLQEP 442


>gi|325134221|gb|EGC56870.1| hypothetical protein NMBM13399_1164 [Neisseria meningitidis M13399]
 gi|325144411|gb|EGC66713.1| hypothetical protein NMBM01240013_1195 [Neisseria meningitidis
           M01-240013]
 gi|325206159|gb|ADZ01612.1| conserved hypothetical protein [Neisseria meningitidis M04-240196]
          Length = 167

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 126 PSKGLSVAFDAYVE----SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           P       FDA V     +A ++ Q   G+   G++ + +L+A+N   +  +  L+ N  
Sbjct: 74  PEAVAFQFFDACVNHGYGNAARMLQRAAGVPDDGVIGAVSLKAINSLPENDL-LLRFNAE 132

Query: 182 RI 183
           R+
Sbjct: 133 RL 134


>gi|319762822|ref|YP_004126759.1| lytic murein transglycosylase [Alicycliphilus denitrificans BC]
 gi|317117383|gb|ADU99871.1| lytic murein transglycosylase [Alicycliphilus denitrificans BC]
          Length = 442

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 7/75 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP    R L   + S  V+ L+E L   G LD      VA      + V+ +Q   GL  
Sbjct: 375 WP----RDLQPLSRS-DVKTLQELLNARG-LDAGTPDGVA-GPATRAGVRRYQQSLGLPA 427

Query: 154 SGMVDSSTLEAMNVP 168
            G      L+ +  P
Sbjct: 428 DGYATRELLQQLQEP 442


>gi|148653769|ref|YP_001280862.1| lytic murein transglycosylase [Psychrobacter sp. PRwf-1]
 gi|148572853|gb|ABQ94912.1| lytic murein transglycosylase [Psychrobacter sp. PRwf-1]
          Length = 486

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP         G S    + L++ L + G  D  +   +  D     A++ +Q  +GL P
Sbjct: 346 WPTDD-----PGLSRKQSRELQQALNLLGY-DIGEVDGIIGDGT-RRAIQQYQTDNGLTP 398

Query: 154 SGMVDSS 160
            G     
Sbjct: 399 DGRAGKK 405


>gi|75677470|ref|NP_001028511.1| matrix metalloproteinase-25 precursor [Mus musculus]
 gi|123796969|sp|Q3U435|MMP25_MOUSE RecName: Full=Matrix metalloproteinase-25; Short=MMP-25; Flags:
           Precursor
 gi|74181785|dbj|BAE32600.1| unnamed protein product [Mus musculus]
 gi|109730167|gb|AAI12380.1| Matrix metallopeptidase 25 [Mus musculus]
          Length = 615

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+  +         ++ A+K+ Q   GL  +G +D  T++ M  P       
Sbjct: 91  LTRYGYLPPADPVHAQMQSLEKLQDAIKVMQRFAGLPETGQMDPMTIKTMRKPRCSLPDV 150

Query: 176 L-QVNLMRIKK 185
           L    L+R ++
Sbjct: 151 LGAAGLVRRRR 161


>gi|298292273|ref|YP_003694212.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296928784|gb|ADH89593.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 336

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 186 LLEQKMGLRYV--LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
               +    YV  +V++P        NG     ST   G+   QTP+
Sbjct: 51  WYPDRAPEGYVAIIVSLPDQRCYVYRNGVRIGVSTCSTGKPGHQTPV 97


>gi|148690305|gb|EDL22252.1| matrix metallopeptidase 25 [Mus musculus]
          Length = 562

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+  +         ++ A+K+ Q   GL  +G +D  T++ M  P       
Sbjct: 38  LTRYGYLPPADPVHAQMQSLEKLQDAIKVMQRFAGLPETGQMDPMTIKTMRKPRCSLPDV 97

Query: 176 L-QVNLMRIKK 185
           L    L+R ++
Sbjct: 98  LGAAGLVRRRR 108


>gi|255320738|ref|ZP_05361914.1| membrane-bound lytic murein transglycosylase B [Acinetobacter
           radioresistens SK82]
 gi|262380641|ref|ZP_06073794.1| lytic murein transglycosylase B [Acinetobacter radioresistens
           SH164]
 gi|255302208|gb|EET81449.1| membrane-bound lytic murein transglycosylase B [Acinetobacter
           radioresistens SK82]
 gi|262297589|gb|EEY85505.1| lytic murein transglycosylase B [Acinetobacter radioresistens
           SH164]
          Length = 427

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 36/102 (35%), Gaps = 12/102 (11%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGG-----WPELPIRPLHLGNSSVSVQRLRERLIISGD 123
           I S         AIA   D L   G     WP         G S    + +++ L+  G 
Sbjct: 326 IYSYNAAESYGLAIAHLSDRLQGQGPFLTAWPTDDA-----GTSRAERREIQQFLLKKGY 380

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            D      +  D     A++  Q R GL+P+G      L A+
Sbjct: 381 -DIGAVDGLIGDKT-RQAIRQEQQRLGLNPTGRAGQQILRAL 420


>gi|302346982|ref|YP_003815280.1| putative lipoprotein [Prevotella melaninogenica ATCC 25845]
 gi|302151113|gb|ADK97374.1| putative lipoprotein [Prevotella melaninogenica ATCC 25845]
          Length = 514

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 48/149 (32%), Gaps = 17/149 (11%)

Query: 258 LLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIFRQD--PGKINAMASTK 312
              ++  Y    +I++ D  G +      ++  WN  E  +    Q     K N      
Sbjct: 285 KYEKNDYYDMTADINVTDYDGSKYYMWDAQKNYWNGHEWNSANPWQPVLANKSNP----- 339

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             +    ++Y H T     F        S C  + N  +L  ++    P W    +   +
Sbjct: 340 -NYPVSGSSYFHRT---GGFGRED-AMNSSCKNLPNANELGWYVKNGDPRWDDDKLWTAM 394

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS 401
                  + L  +  ++ +  ++++    
Sbjct: 395 GHLYKGGIWLRNKAYINLI--TSFNSDQG 421


>gi|194205554|ref|XP_001916022.1| PREDICTED: matrix metallopeptidase 21 [Equus caballus]
          Length = 566

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 47/146 (32%), Gaps = 37/146 (25%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
              +    + +      D       P+   + IA    A    Q  LS+ GW E P    
Sbjct: 15  WLAAPRPAQPETLFHSRDRSDLEPSPLRRAKPIADLPAA----QRFLSKYGWAEAPHES- 69

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                       R          PS   S    A +  AV+ FQ  + L  SG +D++TL
Sbjct: 70  ------------RA---------PSPEGSPR--AALAEAVRRFQKVNALPTSGELDAATL 106

Query: 163 EAMNVPVDLRI------RQLQVNLMR 182
                P   R+       QL ++  R
Sbjct: 107 A---TPDPGRLLGEGVSSQLALDEQR 129


>gi|110635323|ref|YP_675531.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1]
 gi|110286307|gb|ABG64366.1| ErfK/YbiS/YcfS/YnhG [Chelativorans sp. BNC1]
          Length = 490

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 45/157 (28%), Gaps = 46/157 (29%)

Query: 204 SLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            +    E G++       +G  D  +P    ++ R+  NP                   +
Sbjct: 366 QVRLFDEGGRLIGVYPATIGSSDTPSPTGIHQVERVALNP-------------------N 406

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNT 321
             Y    N      +G    V  +               PG    + S  I         
Sbjct: 407 YTYDPRKNFK----QGNNDKVLTI--------------PPGPNGPVGSVWIALSKPTYGI 448

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
             H TPEP     + +  + GCVR+ N    +L   +
Sbjct: 449 --HGTPEPS---KIGKTYSHGCVRLTNWDAQELAKRV 480


>gi|311280239|ref|YP_003942470.1| Peptidoglycan-binding domain 1 protein [Enterobacter cloacae SCF1]
 gi|308749434|gb|ADO49186.1| Peptidoglycan-binding domain 1 protein [Enterobacter cloacae SCF1]
          Length = 517

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 4/52 (7%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM----NVPVDL 171
           L      S  + A +    + FQ + G+   G+    TL  +    N+   +
Sbjct: 450 LGKPPTQSTRWTAELMQRTRDFQSKAGIGVDGIAGEETLIQLMRSVNMTPSV 501


>gi|260683966|ref|YP_003215251.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile CD196]
 gi|260687626|ref|YP_003218760.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile R20291]
 gi|260210129|emb|CBA64277.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile CD196]
 gi|260213643|emb|CBE05474.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile R20291]
          Length = 175

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
                F     +AVK  Q R GL   G+V  ST +A
Sbjct: 135 DDDSEFGPATYNAVKSLQGRLGLTRDGIVGRSTWDA 170


>gi|254510501|ref|ZP_05122568.1| peptidoglycan binding domain protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221534212|gb|EEE37200.1| peptidoglycan binding domain protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 430

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 13/68 (19%)

Query: 91  RGGWPELPIRPLHLGN---SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           + GWP         G+   S    + L+ RL  +G    +KG+         +AV+ FQ+
Sbjct: 362 QTGWPR--------GDRVLSFAERKELQRRLTQAGF--DTKGIDGRTGPNTINAVRAFQV 411

Query: 148 RHGLDPSG 155
             GL P G
Sbjct: 412 AQGLVPDG 419


>gi|217979650|ref|YP_002363797.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylocella silvestris BL2]
 gi|217505026|gb|ACK52435.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylocella silvestris BL2]
          Length = 255

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 7/73 (9%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP- 153
            +   P L   +    V+ L+  L   G       +S A+DA  +  ++ FQ RH     
Sbjct: 177 PISAGPRLDHNSRGAEVEELQAMLGAYGY---GAPVSGAYDARTQCVIRAFQ-RHFRPAL 232

Query: 154 -SGMVDSSTLEAM 165
             G+ D ST+  +
Sbjct: 233 VDGIADFSTVATL 245


>gi|149377324|ref|ZP_01895070.1| Peptidoglycan-binding LysM [Marinobacter algicola DG893]
 gi|149358421|gb|EDM46897.1| Peptidoglycan-binding LysM [Marinobacter algicola DG893]
          Length = 703

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 20/95 (21%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             V+ A++ FQ     +        TL+ MN     +  QL  NL R+ + + +    R 
Sbjct: 620 GAVKKAMESFQGWRDFE-------ETLKRMNSDGQAKTEQLDRNLERLFEFVGKSKPERN 672

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
           + +             +       I GR  ++ P 
Sbjct: 673 LFI-------------RQLKNRKAIAGRPVQRDPF 694


>gi|52549472|gb|AAU83321.1| hypothetical protein GZ27E6_43 [uncultured archaeon GZfos27E6]
          Length = 585

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 25/56 (44%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           SV  +R    + G     +  S  F   +   + ++Q++ GL+  G +   TL+ +
Sbjct: 270 SVDFVRRIESLFGFSHSKESESGKFSKDLVRVLAIYQLKEGLEADGELGDETLKKL 325


>gi|225848549|ref|YP_002728712.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643366|gb|ACN98416.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 249

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           +KK L +   L  V ++     L     +E  K  +   V +G  D  TP    +I    
Sbjct: 102 LKKQLPEDFKLNTVYISTQDHRLYYPIELEGKKYVITFPVGLGGEDFPTPKGEFKITERR 161

Query: 240 FNPYWVIPRS 249
            NP WV+P S
Sbjct: 162 VNPDWVVPPS 171


>gi|188582710|ref|YP_001926155.1| lytic murein transglycosylase [Methylobacterium populi BJ001]
 gi|179346208|gb|ACB81620.1| lytic murein transglycosylase [Methylobacterium populi BJ001]
          Length = 400

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              ++RL+  L   G     +         +  AV+ +Q+R GL   G    + LE +
Sbjct: 338 GPGLKRLQAGLAAQGLYAGEQDGRAG--PKLREAVRQYQIREGLPADGYARPALLERL 393


>gi|52550439|gb|AAU84288.1| hypothetical protein GZ9D1_1 [uncultured archaeon GZfos9D1]
          Length = 344

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 25/56 (44%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           SV  +R    + G     +  S  F   +   + ++Q++ GL+  G +   TL+ +
Sbjct: 270 SVDFVRRIESLFGFSHSKESESGKFSKDLVRVLAIYQLKEGLEADGELGDETLKKL 325


>gi|15676901|ref|NP_274047.1| hypothetical protein NMB1012 [Neisseria meningitidis MC58]
 gi|218768104|ref|YP_002342616.1| hypothetical protein NMA1230 [Neisseria meningitidis Z2491]
 gi|7226252|gb|AAF41413.1| hypothetical protein NMB1012 [Neisseria meningitidis MC58]
 gi|121052112|emb|CAM08426.1| hypothetical protein NMA1230 [Neisseria meningitidis Z2491]
 gi|316985893|gb|EFV64834.1| peptidoglycan domain protein [Neisseria meningitidis H44/76]
 gi|319410345|emb|CBY90693.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
 gi|325140268|gb|EGC62793.1| hypothetical protein NMBCU385_1107 [Neisseria meningitidis CU385]
 gi|325200303|gb|ADY95758.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|325204085|gb|ADY99538.1| conserved hypothetical protein [Neisseria meningitidis M01-240355]
          Length = 167

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 126 PSKGLSVAFDAYVE----SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           P       FDA V     +A ++ Q   G+   G++ + +L+A+N   +  +  L+ N  
Sbjct: 74  PEAVAFQFFDACVNHGYGNAARMLQRAAGVPDDGVIGAVSLKAINSLPENDL-LLRFNAE 132

Query: 182 RI 183
           R+
Sbjct: 133 RL 134


>gi|89069939|ref|ZP_01157272.1| peptidoglycan binding domain protein [Oceanicola granulosus
           HTCC2516]
 gi|89044493|gb|EAR50621.1| peptidoglycan binding domain protein [Oceanicola granulosus
           HTCC2516]
          Length = 375

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L+ERL  +G    ++G          +AV+ +Q+ HGL P G
Sbjct: 324 ELQERLTSAGF--CTRGADGLIGPDTVAAVRAYQLAHGLRPDG 364


>gi|260467449|ref|ZP_05813619.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259028785|gb|EEW30091.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 334

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 8/78 (10%)

Query: 297 IFRQDPGKINAMASTKIEFY-SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLD 353
            F    G  N + S  I+          H TPEP     +    + GC+R+ N    DL 
Sbjct: 256 PFTIAAGPNNPVGSVWIDLSIESYGI--HGTPEPG---KIGTTFSHGCIRLTNWDAEDLA 310

Query: 354 VWLLKDTPTWSRYHIEEV 371
             + + T    +  + +V
Sbjct: 311 SMVQEGTTVNFKDEMADV 328


>gi|153815857|ref|ZP_01968525.1| hypothetical protein RUMTOR_02102 [Ruminococcus torques ATCC 27756]
 gi|145846882|gb|EDK23800.1| hypothetical protein RUMTOR_02102 [Ruminococcus torques ATCC 27756]
          Length = 101

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L +I+G     P       + +    +V+ FQ    L  +
Sbjct: 17  PGYVLEIGSSGEKVRQIQEQLNVIAGAYPAIPKITADGIYGSKTAESVRKFQEVFQLPQT 76

Query: 155 GMVDSSTLE 163
           G VD ST  
Sbjct: 77  GKVDYSTWY 85


>gi|130486970|ref|NP_001076262.1| matrix metalloproteinase-14 precursor [Oryctolagus cuniculus]
 gi|3041677|sp|Q95220|MMP14_RABIT RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
           Full=Membrane-type matrix metalloproteinase 1;
           Short=MT-MMP 1; Short=MTMMP1; AltName:
           Full=Membrane-type-1 matrix metalloproteinase;
           Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
 gi|1805295|gb|AAB41500.1| membrane type 1 metalloproteinase [Oryctolagus cuniculus]
          Length = 582

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADTDTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|148258177|ref|YP_001242762.1| hypothetical protein BBta_6969 [Bradyrhizobium sp. BTAi1]
 gi|146410350|gb|ABQ38856.1| hypothetical protein BBta_6969 [Bradyrhizobium sp. BTAi1]
          Length = 219

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                 +  R   G  N + +  I  Y  +++  Y +H T +P          +SGC+R+
Sbjct: 124 QARLGPYPKRVPGGPANPLGARAIYLYEGNKDTLYRIHGTNQPEYIGQ---AISSGCIRM 180

Query: 347 RN 348
            N
Sbjct: 181 TN 182


>gi|262402951|ref|ZP_06079511.1| secretion activator protein [Vibrio sp. RC586]
 gi|262350450|gb|EEY99583.1| secretion activator protein [Vibrio sp. RC586]
          Length = 172

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 4/37 (10%)

Query: 132 VAFDAYVE----SAVKLFQMRHGLDPSGMVDSSTLEA 164
             FDA V+     AVK+ Q   G  P G++   TL A
Sbjct: 85  QLFDAAVQHGWHRAVKMLQSSVGEKPDGIIGPKTLSA 121


>gi|153812437|ref|ZP_01965105.1| hypothetical protein RUMOBE_02836 [Ruminococcus obeum ATCC 29174]
 gi|149831599|gb|EDM86686.1| hypothetical protein RUMOBE_02836 [Ruminococcus obeum ATCC 29174]
          Length = 349

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L++G +   V++L+E+L +I+G     P  G    +      +V+ FQ   GL  +
Sbjct: 265 PGYDLNIGATGEKVRQLQEQLNVIAGAYPAIPKVGEDGIYGERTSESVRKFQNVFGLPET 324

Query: 155 GMVDSSTLE 163
           G+ D  T  
Sbjct: 325 GITDYPTWY 333


>gi|227903913|ref|ZP_04021718.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC
           4796]
 gi|227868304|gb|EEJ75725.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC
           4796]
          Length = 208

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 7/55 (12%)

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           RL   G           ++    +AVK FQ  H L  +G V+  T + +      
Sbjct: 3   RLGTWG-------GHNYYNQATYNAVKNFQKNHNLPATGNVNLKTWQKLGFSKSS 50


>gi|13591995|ref|NP_112318.1| matrix metalloproteinase-14 [Rattus norvegicus]
 gi|146345458|sp|Q10739|MMP14_RAT RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
           Full=Membrane-type matrix metalloproteinase 1;
           Short=MT-MMP 1; Short=MTMMP1; AltName:
           Full=Membrane-type-1 matrix metalloproteinase;
           Short=MT-MMP; Short=MT1-MMP; Short=MT1MMP; Flags:
           Precursor
 gi|1001927|emb|CAA62897.1| membrane-type metalloproteinase [Rattus norvegicus]
 gi|47939003|gb|AAH72509.1| Mmp14 protein [Rattus norvegicus]
 gi|149063898|gb|EDM14168.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_a
           [Rattus norvegicus]
 gi|149063899|gb|EDM14169.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_a
           [Rattus norvegicus]
          Length = 582

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  DS T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLQVTGKADSDTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGTEIKANVRRKR 111


>gi|297850892|ref|XP_002893327.1| hypothetical protein ARALYDRAFT_889959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339169|gb|EFH69586.1| hypothetical protein ARALYDRAFT_889959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 387

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           H G     + +L++     G +  +      +  FD  +++AV+++Q    L+ +G++D 
Sbjct: 53  HAGKKYDGLYKLKQYFQHFGYIPETDLSGNFTDDFDDILKNAVEMYQRNFQLNVTGVLDE 112

Query: 160 STLEAMNVP 168
            TL+ + +P
Sbjct: 113 LTLKHVVIP 121


>gi|297580086|ref|ZP_06942013.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535732|gb|EFH74566.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 172

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 4/37 (10%)

Query: 132 VAFDAYVE----SAVKLFQMRHGLDPSGMVDSSTLEA 164
             FDA V+     AVK+ Q   G  P G++   TL A
Sbjct: 85  QLFDAAVQHGWHRAVKMLQSSVGEKPDGIIGPKTLSA 121


>gi|126322083|ref|XP_001368525.1| PREDICTED: similar to metalloproteinase [Monodelphis domestica]
          Length = 607

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQRFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|13027664|gb|AAG34676.2|AF306662_1 matrix metalloprotease MT1-MMP [Cricetulus griseus]
          Length = 582

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +AV   Q  +GL  +G  D  T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAVAAMQRFYGLQVTGKADLDTMKAMKRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGTEIKANVRRKR 111


>gi|291415807|ref|XP_002724141.1| PREDICTED: matrix metalloproteinase 17, partial [Oryctolagus
           cuniculus]
          Length = 541

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 21/114 (18%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP------- 168
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 3   LSRFGYLPPADSTTGQLQTQEELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLPDL 62

Query: 169 ---VDLRIRQLQ--------VNL-MRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
                 R R+           NL  R++         R  +  +   +L+   +
Sbjct: 63  PPVAQARRRRQAPAPTKWNKRNLSWRVRTFPRDSPLGRDTVRALMYYTLKVWSD 116


>gi|805013|emb|CAA58521.1| MT-MMP [Rattus norvegicus]
          Length = 582

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  DS T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAIQRFYGLQVTGKADSDTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGTEIKANVRRKR 111


>gi|328906347|gb|EGG26122.1| YkuG protein [Propionibacterium sp. P08]
          Length = 792

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-----FDAYVESAVKLFQMRH 149
            +L    L  G+S V V+ L    + +G +   +G+        FD  + S ++ FQ   
Sbjct: 216 QQLAAHSLKPGDSGVLVELLSAACVFNGAVPSGEGMVHTVFKHEFDDKLASYIRAFQAFS 275

Query: 150 GLDPSGMVDSSTLEAMNVPVDL 171
            L  +  VD +T   + V    
Sbjct: 276 LLPVTNRVDYATWCQLLVSTGD 297


>gi|313836153|gb|EFS73867.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
 gi|314927591|gb|EFS91422.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
 gi|314971413|gb|EFT15511.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
          Length = 792

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-----FDAYVESAVKLFQMRH 149
            +L    L  G+S V V+ L    + +G +   +G+        FD  + S ++ FQ   
Sbjct: 216 QQLAAHSLKPGDSGVLVELLSAACVFNGAVPSGEGMVHTVFKHEFDDKLASYIRAFQAFS 275

Query: 150 GLDPSGMVDSSTLEAMNVPVDL 171
            L  +  VD +T   + V    
Sbjct: 276 LLPVTNRVDYATWCQLLVSTGD 297


>gi|297519285|ref|ZP_06937671.1| hypothetical protein EcolOP_16715 [Escherichia coli OP50]
          Length = 170

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 4/56 (7%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
             G  N +    +     N  Y +H T  P   ++V    +SGC+R+       ++
Sbjct: 5   PAGPNNPLGRYALRLAHGNGEYLIHGTSAP---DSVGLRVSSGCIRMNAPDIKALF 57


>gi|115467320|ref|NP_001057259.1| Os06g0239100 [Oryza sativa Japonica Group]
 gi|51535159|dbj|BAD37871.1| putative metalloproteinase [Oryza sativa Japonica Group]
 gi|51535823|dbj|BAD37908.1| putative metalloproteinase [Oryza sativa Japonica Group]
 gi|113595299|dbj|BAF19173.1| Os06g0239100 [Oryza sativa Japonica Group]
 gi|125596648|gb|EAZ36428.1| hypothetical protein OsJ_20758 [Oryza sativa Japonica Group]
          Length = 371

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSGM 156
           H G+    + +L++ L   G L            +  FDA +E A+K++Q   GLD +G 
Sbjct: 54  HFGDERQGLGKLKDYLWHFGYLSYPSSSSLSPSFNDLFDADMELAIKMYQGNFGLDVTGD 113

Query: 157 VDSSTLEAM 165
           +D++T+  M
Sbjct: 114 LDAATVSQM 122


>gi|310816790|ref|YP_003964754.1| peptidoglycan-binding domain 1 [Ketogulonicigenium vulgare Y25]
 gi|308755525|gb|ADO43454.1| peptidoglycan-binding domain 1 [Ketogulonicigenium vulgare Y25]
          Length = 560

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +RL   G       +   FD    +A++ +Q   GL  +G +D   L  +
Sbjct: 502 DRLNALGF--NPGTVDGVFDDETRAALRRYQEARGLPVTGYLDQQVLVRL 549


>gi|291444959|ref|ZP_06584349.1| membrane protein [Streptomyces roseosporus NRRL 15998]
 gi|291347906|gb|EFE74810.1| membrane protein [Streptomyces roseosporus NRRL 15998]
          Length = 377

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 4/68 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGD----LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              G S+  V RL ++L+  G     +     L    D     A +  Q   G    G  
Sbjct: 308 FKPGQSNSHVDRLGKQLVKKGYGKHYVSGPSPLWTEADRRNVEAFQRAQGWRGGAADGYP 367

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 368 GPETWRRL 375


>gi|71908465|ref|YP_286052.1| hypothetical protein Daro_2852 [Dechloromonas aromatica RCB]
 gi|71848086|gb|AAZ47582.1| hypothetical protein Daro_2852 [Dechloromonas aromatica RCB]
          Length = 335

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 21/69 (30%), Gaps = 15/69 (21%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           L +R L LG S   V                      F     + +K FQ   GL  +G+
Sbjct: 280 LDVRLLQLGMSGRGVAI---------------KADGIFGQTSVNLLKRFQASQGLPANGI 324

Query: 157 VDSSTLEAM 165
                L  +
Sbjct: 325 ATPQQLSEL 333


>gi|302551254|ref|ZP_07303596.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
 gi|302468872|gb|EFL31965.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
          Length = 606

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 16/102 (15%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ ++  L   G       +   F       V  FQ+  GL P+G+V+  T +A
Sbjct: 434 GEHDACVKEVQRLLHTKG---ADIDVDGDFGPQTLRRVTAFQVLAGLQPNGVVEEPTKKA 490

Query: 165 MNVP-------VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +             ++RQ      R++++  +       + +
Sbjct: 491 LYTSRVRMTVWPQEKVRQ------RVREVFPEAPDKAVAIAD 526


>gi|293189660|ref|ZP_06608377.1| putative peptidoglycan binding domain protein [Actinomyces
           odontolyticus F0309]
 gi|292821398|gb|EFF80340.1| putative peptidoglycan binding domain protein [Actinomyces
           odontolyticus F0309]
          Length = 344

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 5/80 (6%)

Query: 100 RPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R    G S    V +L   L   G  + +   +  FD    +A+K +Q    L  SG + 
Sbjct: 98  RAFEEGMSDGEDVTQLETALSELGYFEATP--NAHFDWNTIAAIKRWQKALSLPQSGSLP 155

Query: 159 SSTLEAMNVPVDLRIRQLQV 178
             T+  +  P DLRI  L+ 
Sbjct: 156 LGTV--LFAPEDLRIGALKA 173


>gi|95108222|emb|CAD18391.2| putative membrane-bound lytic murein transglycosylase b protein
           [Ralstonia solanacearum GMI1000]
          Length = 427

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           N++  ++RL++RL   G  DP     +  D   ++A++ +Q    L   G    S L  +
Sbjct: 368 NNATDIKRLQQRLADKGY-DPGTIDGLIGDRT-QTAIRAYQKDQHLPQDGYASRSLLARL 425


>gi|327291129|ref|XP_003230274.1| PREDICTED: matrix metalloproteinase-15-like, partial [Anolis
           carolinensis]
          Length = 404

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L PS        +   + +A+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 49  LRFYGYLPPSSPQMSTLRSAQTLSAAISEMQGFYGIPVTGLLDHETAAWMKRPRCGVPDK 108

Query: 172 RIRQLQVNLMRIK 184
               ++ N+ R +
Sbjct: 109 IGAGVKANMRRKR 121


>gi|125554704|gb|EAZ00310.1| hypothetical protein OsI_22327 [Oryza sativa Indica Group]
          Length = 371

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSGM 156
           H G+    + +L++ L   G L            +  FDA +E A+K++Q   GLD +G 
Sbjct: 54  HFGDERQGLGKLKDYLWHFGYLSYPSSSSLSPSFNDLFDADMELAIKMYQGNFGLDVTGD 113

Query: 157 VDSSTLEAM 165
           +D++T+  M
Sbjct: 114 LDAATVSQM 122


>gi|153800512|ref|ZP_01955098.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124123956|gb|EAY42699.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 172

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 4/37 (10%)

Query: 132 VAFDAYVE----SAVKLFQMRHGLDPSGMVDSSTLEA 164
             FDA V+     AVK+ Q   G  P G++   TL A
Sbjct: 85  QLFDAAVQHGWHRAVKMLQSSVGEKPDGIIGPKTLSA 121


>gi|319404611|emb|CBI78217.1| peptidoglycan-binding protein [Bartonella rochalimae ATCC BAA-1498]
          Length = 350

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+ RL   GD +      +   +    A+K FQ+RHGL+ +G     TL  +
Sbjct: 297 ELQSRLAKLGDYEGEIDGKIGIASK--KAIKAFQLRHGLEGNGYPSYETLSHI 347


>gi|255657666|ref|ZP_05403075.1| hypothetical protein CdifQCD-2_18693 [Clostridium difficile
           QCD-23m63]
 gi|296450189|ref|ZP_06891950.1| probable peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile NAP08]
 gi|296878570|ref|ZP_06902575.1| probable peptidoglycan-binding/hydrolyzing protein [Clostridium
           difficile NAP07]
 gi|296260952|gb|EFH07786.1| probable peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile NAP08]
 gi|296430377|gb|EFH16219.1| probable peptidoglycan-binding/hydrolyzing protein [Clostridium
           difficile NAP07]
          Length = 195

 Score = 37.1 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
                F     +AVK  Q R GL   G+V  ST +A
Sbjct: 155 KDDSEFGPATYNAVKSLQGRLGLTRDGIVGRSTWDA 190


>gi|293400970|ref|ZP_06645115.1| penicillin-resistant DD-carboxypeptidase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291305996|gb|EFE47240.1| penicillin-resistant DD-carboxypeptidase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 168

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 14/85 (16%)

Query: 102 LHLGNSSVSVQRLRERLIISG---DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +  G+  + V +L+  L +      +         F    E+AV+ +Q   GL   G+++
Sbjct: 7   IKRGDLGIGVNKLQAYLNMMQQRNLISTVNKQDGVFGPLTETAVREWQRYAGLPIDGVIN 66

Query: 159 SSTLEAM-----------NVPVDLR 172
            +T  ++           N+PV  R
Sbjct: 67  YNTWNSLVDKLRELGVVTNIPVANR 91



 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 19/37 (51%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   +     +AV+ +Q  + L+  G++ S T +++
Sbjct: 125 PVDGIYGPRTVAAVQQYQYLYDLNVDGVIGSMTWDSI 161


>gi|260431451|ref|ZP_05785422.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415279|gb|EEX08538.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 188

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 6/55 (10%)

Query: 298 FRQDPGKINAMA-STKIEFYSRNNTYM--HDTPEPILFNNVVRFETSGCVRVRNI 349
           + Q  G  N +       F +  +TY   H T +P     + R  ++GC+R+ N 
Sbjct: 119 YVQPGGGDNPLGARALYLFQNGVDTYFRIHGTTQP---QTIGRAVSNGCIRMLNA 170


>gi|150396530|ref|YP_001326997.1| peptidoglycan binding domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150028045|gb|ABR60162.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium medicae
           WSM419]
          Length = 307

 Score = 37.1 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEAM 165
              V+  +E L   G    +  +          A+  +Q  H  L+  G++  +TL  +
Sbjct: 182 DALVKEAQEILTSKGFNPGA--IDGWMGEKTRDAIIAYQKAHPHLEADGILGPATLSQL 238


>gi|194678314|ref|XP_609577.4| PREDICTED: matrix metalloproteinase 25 [Bos taurus]
 gi|297490016|ref|XP_002697915.1| PREDICTED: matrix metalloproteinase 25 preproprotein-like [Bos
           taurus]
 gi|296473539|gb|DAA15654.1| matrix metalloproteinase 25 preproprotein-like [Bos taurus]
          Length = 674

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P         +   +  A+K+ Q   GL  +G++D  T+  M+ P       
Sbjct: 149 LTRYGYLPPPHPAQAQLQSPAKLRDAIKVMQRFAGLPETGVLDPLTVATMHKPRCSLPDV 208

Query: 176 L-QVNLMRIKK 185
           L    L+R ++
Sbjct: 209 LGAAGLVRRRR 219


>gi|114704914|ref|ZP_01437822.1| hypothetical protein FP2506_08256 [Fulvimarina pelagi HTCC2506]
 gi|114539699|gb|EAU42819.1| hypothetical protein FP2506_08256 [Fulvimarina pelagi HTCC2506]
          Length = 1293

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 113  RLRERLIISGDLDPSKGLSVAFDAYVE-SAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +R    I G+L    G        +  +A+K FQ   GL  +G +D + + A+
Sbjct: 1234 AIRNIQAILGNLGYDAGPPDGVIGDLTRTAIKDFQSDAGLASTGEIDEALIRAL 1287


>gi|93006394|ref|YP_580831.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5]
 gi|92394072|gb|ABE75347.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5]
          Length = 391

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 6/54 (11%)

Query: 301 DPGKINAMASTKIEFYSR-NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
            PG  N + S  I           H +P+P     + R  ++GC+R+ N   L 
Sbjct: 329 PPGPNNPVGSVWIGLSKPSYGI--HGSPDP---ARISRQASAGCIRLTNWDALA 377


>gi|220924768|ref|YP_002500070.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium nodulans ORS 2060]
 gi|219949375|gb|ACL59767.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium nodulans ORS 2060]
          Length = 249

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 10/92 (10%)

Query: 89  LSRGGW-PELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
              G W P  PIR       G++   ++ L+    + G     + ++  FD  + + V+ 
Sbjct: 162 AGVGHWVPPAPIRDGRFFAEGDAGQPIEALQAMFALYGY---DQPVTGTFDVRMRAVVEA 218

Query: 145 FQMRHGLDP--SGMVDSSTLEAMNVPVDLRIR 174
           FQ RH       G+ D+ST+  +   +  R  
Sbjct: 219 FQ-RHFRPARVDGVADASTITTLRDLIAARAA 249


>gi|163815210|ref|ZP_02206587.1| hypothetical protein COPEUT_01368 [Coprococcus eutactus ATCC 27759]
 gi|158449405|gb|EDP26400.1| hypothetical protein COPEUT_01368 [Coprococcus eutactus ATCC 27759]
          Length = 410

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V +L+ +L       P+ G   +   +  +   AVK FQ    L  +
Sbjct: 326 PGYDLTIGSSGDKVFQLQRQLARIALNYPAIGSIAVDGVYGQHTADAVKNFQQIFNLPAT 385

Query: 155 GMVDSSTLE 163
           G+ D  T  
Sbjct: 386 GVTDYKTWY 394


>gi|121592902|ref|YP_984798.1| peptidoglycan-binding domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604982|gb|ABM40722.1| Peptidoglycan-binding domain 1 protein [Acidovorax sp. JS42]
          Length = 580

 Score = 37.1 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 18/68 (26%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESA------------------VKLFQMRHGLDPSGMVDS 159
           L  SGD+  +   +   D  + +A                  +  FQ+  GL P G    
Sbjct: 500 LADSGDVTATAAGAAWLDQQLAAAGAGTAAARTATPAARRARIHQFQLGQGLTPDGRAGP 559

Query: 160 STLEAMNV 167
            TL  +N 
Sbjct: 560 LTLMLLNR 567


>gi|269957944|ref|YP_003327733.1| peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269306625|gb|ACZ32175.1| Peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 363

 Score = 37.1 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 88  ILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           I + G    +P  R L  G     V +L+  L+ +G L         F A    AV+ +Q
Sbjct: 110 IAAVG---TVPAFRDLSQGMKGEDVAQLQRFLVDAGYLKGRADGD--FGAATTVAVRAWQ 164

Query: 147 MRHGLDPSGMV 157
               ++  G+V
Sbjct: 165 RILDVERDGVV 175


>gi|168213487|ref|ZP_02639112.1| spore cortex-lytic enzyme SleC [Clostridium perfringens CPE str.
           F4969]
 gi|940393|dbj|BAA08081.1| spore cortex-lytic enzyme pre-pro-form [Clostridium perfringens]
 gi|14349151|dbj|BAB60714.1| sleC [Clostridium perfringens]
 gi|170715068|gb|EDT27250.1| spore cortex-lytic enzyme SleC [Clostridium perfringens CPE str.
           F4969]
          Length = 438

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V+ ++E+L        L P   +   +      AVK FQ    L  +
Sbjct: 329 PGYTLKTGYSGEPVRVIQEQLNAISRAYPLIPKIAVDGKYGPKTREAVKTFQKIFNLPQT 388

Query: 155 GMVDSSTLE 163
           G VD +T  
Sbjct: 389 GEVDYATWY 397


>gi|18311542|ref|NP_563476.1| spore cortex-lytic enzyme SleC [Clostridium perfringens str. 13]
 gi|18146226|dbj|BAB82266.1| spore cortex-lytic enzyme [Clostridium perfringens str. 13]
          Length = 438

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V+ ++E+L        L P   +   +      AVK FQ    L  +
Sbjct: 329 PGYTLKTGYSGEPVRVIQEQLNAISRAYPLIPKIAVDGKYGPKTREAVKTFQKIFNLPQT 388

Query: 155 GMVDSSTLE 163
           G VD +T  
Sbjct: 389 GEVDYATWY 397


>gi|302531832|ref|ZP_07284174.1| hypothetical protein SSMG_08214 [Streptomyces sp. AA4]
 gi|302440727|gb|EFL12543.1| hypothetical protein SSMG_08214 [Streptomyces sp. AA4]
          Length = 245

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 13/36 (36%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   F    E AVK FQ   G    G V   T   +
Sbjct: 208 VDGLFGERTEQAVKDFQRAAGAVVDGKVGPQTWVLL 243


>gi|158300838|ref|XP_320656.4| AGAP011867-PA [Anopheles gambiae str. PEST]
 gi|157013354|gb|EAA00513.4| AGAP011867-PA [Anopheles gambiae str. PEST]
          Length = 100

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L+ S   +        +E AV+  Q   GL  +G VD  TL  M  P
Sbjct: 4   LMQFGYLEKSNIETGNLRTIEELEQAVRSLQRFGGLKETGTVDEETLALMQRP 56


>gi|218531228|ref|YP_002422044.1| lytic murein transglycosylase [Methylobacterium chloromethanicum
           CM4]
 gi|218523531|gb|ACK84116.1| lytic murein transglycosylase [Methylobacterium chloromethanicum
           CM4]
          Length = 413

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL---EAMNVPV 169
           L+ RL   G   P  G          +A++ FQ   GL P G  D++ L    A N P 
Sbjct: 356 LQTRLAALGY--PVGGADGKIGPKTRAAIRAFQEAKGLVPDGYADAALLDRVRAANAPA 412


>gi|307180966|gb|EFN68754.1| E3 ubiquitin-protein ligase Bre1 [Camponotus floridanus]
          Length = 964

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 107 SSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAV---KLFQMRHGLDPSGMVDSSTL 162
               V  LR ++      L+  +  +   + ++  A+   K FQ  HG D  G    +TL
Sbjct: 227 KDTLVAELRNQVDDLQYELNKVRARNDKLEHHLGEAIEKLKAFQQIHGTDEKGSNKPNTL 286

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
            A +V    ++  LQ  L   ++L   ++  
Sbjct: 287 VASSVS-QTKLEDLQRELEETRELANNRLQE 316


>gi|118100493|ref|XP_417326.2| PREDICTED: similar to MMP24 protein [Gallus gallus]
          Length = 565

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L PS     A  +   V+SAV   Q  +G+  +G++D +TLE M  P
Sbjct: 5   LKTYGYLLPSDSQMSAAQSGKAVQSAVATMQQFYGIPVTGVLDQTTLEWMKKP 57


>gi|301752966|ref|XP_002912340.1| PREDICTED: matrix metalloproteinase-15-like [Ailuropoda
           melanoleuca]
          Length = 648

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 19/105 (18%)

Query: 99  IRPLHLGNSSVSVQR--LRER-----------LIISGDLD-PSKGLSVAFDAY-VESAVK 143
            R L  G +   V +  L  R           L + G L  PS+ +S    A  + SA+ 
Sbjct: 13  SRKLKPGENKAFVAKQGLNFRPPVPPYWAWNWLRLYGYLPQPSRHMSTMRSAQILASALA 72

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVP----VDLRIRQLQVNLMRIK 184
             Q  +G+  +G++D  T   M  P     D     ++ NL R +
Sbjct: 73  EMQRFYGIPVTGVLDEETKAWMKRPRCGVPDQFGVHVKANLRRRR 117


>gi|182420023|ref|ZP_02951257.1| spore cortex-lytic enzyme pre-pro-form [Clostridium butyricum 5521]
 gi|237669468|ref|ZP_04529448.1| peptidoglycan-binding domain 1 protein [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182376060|gb|EDT73647.1| spore cortex-lytic enzyme pre-pro-form [Clostridium butyricum 5521]
 gi|237654912|gb|EEP52472.1| peptidoglycan-binding domain 1 protein [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 441

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V+ ++E+L        L P       +   V  +VK+FQ    L  +
Sbjct: 330 PGYDLTVGSSGEPVRTIQEQLNRIAQNYPLIPKLAQDGQYTDKVAESVKVFQGVFSLPQT 389

Query: 155 GMVDSSTLE 163
           G+VD +T  
Sbjct: 390 GVVDYATWY 398


>gi|126734056|ref|ZP_01749803.1| Peptidoglycan-binding domain 1 [Roseobacter sp. CCS2]
 gi|126716922|gb|EBA13786.1| Peptidoglycan-binding domain 1 [Roseobacter sp. CCS2]
          Length = 489

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 6/58 (10%)

Query: 112 QRLRE----RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             LR     RL   G       +   FD     A+  +Q    L  +G +D +TL  +
Sbjct: 427 PVLRRLIENRLEQLGY--NPGRVDGRFDNNTRRAIARYQRDGSLTATGYLDQATLARL 482


>gi|281200353|gb|EFA74573.1| hypothetical protein PPL_11541 [Polysphondylium pallidum PN500]
          Length = 724

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           L+  G LD S   +  +    + A+K  Q  H L  +G  D ST++
Sbjct: 353 LLSIGSLDESADRN-LYTTQTQDAIKKLQSTHNLPDTGEADPSTIK 397


>gi|241202992|ref|YP_002974088.1| peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
            trifolii WSM1325]
 gi|240856882|gb|ACS54549.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
            trifolii WSM1325]
          Length = 1263

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 136  AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            A   +A+K FQ   G +P G V  +T++A+
Sbjct: 1223 AKTVTAIKNFQKSVGQEPDGKVTDATVKAL 1252


>gi|229526575|ref|ZP_04415979.1| secretion activator protein [Vibrio cholerae bv. albensis VL426]
 gi|229336733|gb|EEO01751.1| secretion activator protein [Vibrio cholerae bv. albensis VL426]
          Length = 189

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 4/37 (10%)

Query: 132 VAFDAYVE----SAVKLFQMRHGLDPSGMVDSSTLEA 164
             FDA V+     AVK+ Q   G  P G++   TL A
Sbjct: 102 QLFDAAVQHGWHRAVKMLQSSVGEKPDGIIGPKTLSA 138


>gi|225452578|ref|XP_002280805.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 321

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 106 NSSVSVQRLRERLIISGDLDPS--------KGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           +    + +L++ L   G L  +              FD  +ESA+K +Q  + L  +G +
Sbjct: 56  DKVKGIHKLKKYLEQFGYLSYNSHSKNQIRTDDDDYFDDLLESAIKSYQTNYHLKATGKL 115

Query: 158 DSSTLEAM 165
           DS T+  M
Sbjct: 116 DSETVSEM 123


>gi|300797815|ref|NP_001179551.1| matrix metalloproteinase-16 [Bos taurus]
 gi|297482541|ref|XP_002692871.1| PREDICTED: matrix metallopeptidase 16 (membrane-inserted) [Bos
           taurus]
 gi|296480445|gb|DAA22560.1| matrix metallopeptidase 16 (membrane-inserted) [Bos taurus]
          Length = 607

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L PS            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPSDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|83859898|ref|ZP_00953418.1| membrane-bound lytic murein transglycosylase, putative
           [Oceanicaulis alexandrii HTCC2633]
 gi|83852257|gb|EAP90111.1| membrane-bound lytic murein transglycosylase, putative
           [Oceanicaulis alexandrii HTCC2633]
          Length = 402

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G WP+    P+         + L++ L   G    ++G+   F A   +A+K FQ  +GL
Sbjct: 331 GDWPQ-DNPPITR----SQARELQQTLTDLG--HDTRGVDGIFGANSRAALKSFQAANGL 383

Query: 152 DPSGMVDS 159
            P G    
Sbjct: 384 TPDGYAGR 391


>gi|116623987|ref|YP_826143.1| hypothetical protein Acid_4899 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227149|gb|ABJ85858.1| hypothetical protein Acid_4899 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 238

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP------ILHSRINR 237
           +++ E     + ++V++ A    A E+G++     V  G    QTP        H+R+  
Sbjct: 79  REVPELSDRNKALIVDLAAQVFGAYESGRLVRWGPVSTGDRRHQTPSGTYHLNWHARVRV 138

Query: 238 IMFNPYWVIPR 248
              NP W++P 
Sbjct: 139 SSENPTWIMPW 149


>gi|196233221|ref|ZP_03132067.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
 gi|196222692|gb|EDY17216.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
          Length = 121

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           + V+V+    +L A +  +V L + V  G+ D+ TP
Sbjct: 2   KRVVVDKTTQTLRAFDGDRVVLETRVSTGKWDKSTP 37


>gi|238497486|ref|XP_002379978.1| matrix metalloproteinase, putative [Aspergillus flavus NRRL3357]
 gi|220693252|gb|EED49597.1| matrix metalloproteinase, putative [Aspergillus flavus NRRL3357]
          Length = 274

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVE-SAVKLFQMRHGLD-PSGMVDSSTLEAM 165
           +++R  L   G LD SK     F    + +A++ FQ  +GL   +G  +  T +AM
Sbjct: 21  KKIRAYLQSLGYLDISKSPDGGFSKAEDYAAIRKFQHFYGLKDVTGSYNEKTRQAM 76


>gi|116250359|ref|YP_766197.1| peptidoglycan binding protein [Rhizobium leguminosarum bv. viciae
            3841]
 gi|115255007|emb|CAK06081.1| putative peptidoglycan binding protein [Rhizobium leguminosarum bv.
            viciae 3841]
          Length = 1267

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 18/30 (60%)

Query: 136  AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            A   +A+K FQ   G +P G V  +T++A+
Sbjct: 1227 AKTVTAIKNFQKSVGQEPDGKVTDATVKAL 1256


>gi|108757031|ref|YP_634502.1| hypothetical protein MXAN_6377 [Myxococcus xanthus DK 1622]
 gi|108460911|gb|ABF86096.1| hypothetical protein MXAN_6377 [Myxococcus xanthus DK 1622]
          Length = 352

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 102 LHLGNSSV--SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           L LG+     +   L++RL   G     +  S         A++  Q+ +GL P+G +D 
Sbjct: 282 LELGHVDPLGTFPGLQDRLANLGYFSCCEQDSEHH-PVTRQALERLQLAYGLKPTGKLDG 340

Query: 160 STLEAM 165
           ++ E +
Sbjct: 341 ASRELL 346


>gi|416552|emb|CAA46638.1| hatching enzyme [Paracentrotus lividus]
          Length = 587

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +V+ L+  L   G   P      A +    SA+  FQ   G++ +G++D+ T 
Sbjct: 93  EEGVHESNVEILKAHLEKFGYTPPGSTFGEA-NLNYTSAILDFQEHGGINQTGILDADTA 151

Query: 163 EAMNVP 168
           E ++ P
Sbjct: 152 ELLSTP 157


>gi|1658112|gb|AAD13803.1| membane-type 1 metalloproteinase precursor [Oryctolagus cuniculus]
          Length = 572

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADTDTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|88810999|ref|ZP_01126255.1| hypothetical protein NB231_09363 [Nitrococcus mobilis Nb-231]
 gi|88791538|gb|EAR22649.1| hypothetical protein NB231_09363 [Nitrococcus mobilis Nb-231]
          Length = 362

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 60/169 (35%), Gaps = 19/169 (11%)

Query: 39  IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP 98
           +I+E +   +  +    L  +D G+  ++   +    A     +   + +  R    E+ 
Sbjct: 31  LISELFARTLAQQVAQILTALDGGVVLELGAGTGHMAADLLSELERLEHLPERYLILEVS 90

Query: 99  IRPLHLGNS---SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA--VKLFQMRHGLDP 153
              L    +   + +V +LR R+     L  +    V     V  A  VK FQ    ++ 
Sbjct: 91  A-ALRQEQAQTIARTVPKLRSRVEWLDRLPETPLRGVILANEVIDALPVKRFQ----INS 145

Query: 154 SGM------VDS-STLEAMNVPVDLRIRQLQVNLMRI--KKLLEQKMGL 193
           +G+      +   +TL     P D ++     N+     ++L    +  
Sbjct: 146 NGVQEQVVTLGEDATLTWALAPADPKLDTAVANIEAELGRRLPPDYVSE 194


>gi|222106794|ref|YP_002547585.1| hypothetical protein Avi_5811 [Agrobacterium vitis S4]
 gi|221737973|gb|ACM38869.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 223

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 296 FIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
               Q+ G  N + +  +  Y  +R+  + +H T +P    ++    +SGC+R+ N
Sbjct: 127 LPVVQEGGPDNPLGARAMYLYKGNRDTIFRIHGTNQPW---SIGLNLSSGCIRMNN 179


>gi|222109682|ref|YP_002551946.1| peptidoglycan-binding domain 1 protein [Acidovorax ebreus TPSY]
 gi|221729126|gb|ACM31946.1| Peptidoglycan-binding domain 1 protein [Acidovorax ebreus TPSY]
          Length = 577

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 18/68 (26%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESA------------------VKLFQMRHGLDPSGMVDS 159
           L  SGD+  +   +   D  + +A                  +  FQ+  GL P G    
Sbjct: 497 LADSGDVTATAAGAAWLDQQLAAAGAGAAAARTATPAARRARIHQFQLGQGLTPDGRAGP 556

Query: 160 STLEAMNV 167
            TL  +N 
Sbjct: 557 LTLMLLNR 564


>gi|4191265|emb|CAA09055.1| MT5-MMP protein [Mus musculus]
          Length = 614

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P +  + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 54  LKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 106


>gi|157786912|ref|NP_001099395.1| matrix metalloproteinase-17 [Rattus norvegicus]
 gi|149063179|gb|EDM13502.1| matrix metallopeptidase 17 (predicted) [Rattus norvegicus]
          Length = 587

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 13/86 (15%)

Query: 87  DILSRGG--WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD--AYVESAV 142
            + + GG   P      L LG            L   G L P+   +        +  A+
Sbjct: 31  ALAAHGGCAAPAPRAEDLSLGVEW---------LSKFGYLPPADPATGQLQTQEELSKAI 81

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVP 168
              Q   GL+ +G++D +TL  M  P
Sbjct: 82  TAMQQFGGLETTGILDEATLALMKTP 107


>gi|17549461|ref|NP_522801.1| putative transglycosylase protein [Ralstonia solanacearum GMI1000]
          Length = 390

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           N++  ++RL++RL   G  DP     +  D   ++A++ +Q    L   G    S L  +
Sbjct: 331 NNATDIKRLQQRLADKGY-DPGTIDGLIGDRT-QTAIRAYQKDQHLPQDGYASRSLLARL 388


>gi|302527360|ref|ZP_07279702.1| predicted protein [Streptomyces sp. AA4]
 gi|302436255|gb|EFL08071.1| predicted protein [Streptomyces sp. AA4]
          Length = 246

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L       G+ + +++  + R+   G      G    +D    +AV   Q  +G++ 
Sbjct: 174 WPGL---VYAYGDCAPALRTFQLRMNAFGY--GFSGTGCYYDKT-RTAVLDLQRANGIND 227

Query: 154 SGMVDSSTLEA 164
           SG +   T +A
Sbjct: 228 SGRLGPKTWKA 238


>gi|296534203|ref|ZP_06896690.1| secretion activator protein [Roseomonas cervicalis ATCC 49957]
 gi|296265475|gb|EFH11613.1| secretion activator protein [Roseomonas cervicalis ATCC 49957]
          Length = 179

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 19/125 (15%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES----AVKLFQMRH 149
           +P L I  L L  +    + +  + + + D  P+  L V FD+ V +    AV+  Q+  
Sbjct: 48  FPTLDIASLTLDQARAIYRAMYWQPLGADDFPPATAL-VLFDSAVNNGVSRAVRFLQLAV 106

Query: 150 GLDPSGMVDSSTLEAM-----NVPVDL--------RIRQLQVNLMRIKKLLEQKMGLRYV 196
           G    G++ ++T  A      N   +           R++   + R+       +G    
Sbjct: 107 GSTADGLLGTATRAATRRKLGNGAPEQDVALASEIHARRIDF-MARLSTWPTFGLGWARR 165

Query: 197 LVNIP 201
           L ++P
Sbjct: 166 LASLP 170


>gi|148674197|gb|EDL06144.1| matrix metallopeptidase 24 [Mus musculus]
          Length = 570

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P +  + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 10  LKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 62


>gi|254488253|ref|ZP_05101458.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. GAI101]
 gi|214045122|gb|EEB85760.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. GAI101]
          Length = 183

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 6/50 (12%)

Query: 300 QDPGKINAMA-STKIEFYSRNNTYM--HDTPEPILFNNVVRFETSGCVRV 346
           Q  G  N +       F +  +TY   H T +P    ++ R  ++GC+R+
Sbjct: 116 QPGGPDNPLGARALYLFQNGRDTYFRIHGTTQPS---SIGRSVSNGCIRM 162


>gi|115495469|ref|NP_034938.3| matrix metalloproteinase-24 [Mus musculus]
 gi|123236166|emb|CAM22837.1| matrix metallopeptidase 24 [Mus musculus]
 gi|162317834|gb|AAI56392.1| Matrix metallopeptidase 24 [synthetic construct]
          Length = 618

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P +  + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 58  LKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 110


>gi|33597706|ref|NP_885349.1| putative peptidoglycan-binding protein [Bordetella parapertussis
           12822]
 gi|33602554|ref|NP_890114.1| putative peptidoglycan-binding protein [Bordetella bronchiseptica
           RB50]
 gi|33574134|emb|CAE38463.1| putative peptidoglycan-binding protein [Bordetella parapertussis]
 gi|33576993|emb|CAE34073.1| putative peptidoglycan-binding protein [Bordetella bronchiseptica
           RB50]
          Length = 409

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 17/87 (19%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL-FQM---RHGL---DPSGMVDSSTL 162
           ++  L +RL   GDL  ++      D  +  A +   Q      G     P G++ + T 
Sbjct: 324 AIAHLSDRLR--GDLPFARAWPTD-DPGLSRAERRELQELLLARGFDIGKPDGVIGARTR 380

Query: 163 EAMNV-------PVDLRIRQLQVNLMR 182
           +A+         P D R  Q  +  +R
Sbjct: 381 QALQTVQGQLGLPADGRAGQKTLKALR 407


>gi|297692149|ref|XP_002823430.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-19-like
           [Pongo abelii]
          Length = 507

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER-----LIISGDLDPSKGLSVAFDAY-VESAVKLFQM 147
           W +L +  L     S  V  L E      L   G L      S  F    +  A++ FQ 
Sbjct: 3   WQQLWLGFLLPMTVSGRVLGLAEVAAVDYLSQYGYLQKPLEGSNNFKPEDITEALRAFQE 62

Query: 148 RHGLDPSGMVDSSTLEAMNVP 168
              L  SG +D +T   M  P
Sbjct: 63  ASELPASGQLDDATRARMRQP 83


>gi|239834506|ref|ZP_04682834.1| lytic murein transglycosylase [Ochrobactrum intermedium LMG 3301]
 gi|239822569|gb|EEQ94138.1| lytic murein transglycosylase [Ochrobactrum intermedium LMG 3301]
          Length = 441

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D +    +   +   +A++ FQ R+GL P G      L  +
Sbjct: 388 ELQTHLKALGYYDGNIDGKIG--STSRAAIEAFQQRNGLQPDGHPSKEVLSVL 438


>gi|225685937|ref|YP_002733909.1| lytic murein transglycosylase [Brucella melitensis ATCC 23457]
 gi|256261850|ref|ZP_05464382.1| lytic Murein transglycosylase [Brucella melitensis bv. 2 str. 63/9]
 gi|225642042|gb|ACO01955.1| lytic murein transglycosylase [Brucella melitensis ATCC 23457]
 gi|263091326|gb|EEZ15862.1| lytic Murein transglycosylase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410256|gb|ADZ67320.1| lytic murein transglycosylase [Brucella melitensis M28]
 gi|326553549|gb|ADZ88188.1| lytic murein transglycosylase [Brucella melitensis M5-90]
          Length = 412

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D      +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 359 ELQTHLKALGYYDGKIDGKIGATSR--AALEAFQQRNGLEPDGHPSKEVLSVL 409


>gi|122889876|emb|CAM13982.1| matrix metalloproteinase 16 [Mus musculus]
 gi|123229800|emb|CAM18852.1| matrix metalloproteinase 16 [Mus musculus]
          Length = 174

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 18  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 77

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 78  TRGSSKFNIRRKR 90


>gi|17988368|ref|NP_541001.1| membrane-bound lytic murein transglycosylase B [Brucella melitensis
           bv. 1 str. 16M]
 gi|256042995|ref|ZP_05445941.1| membrane-bound lytic murein transglycosylase B [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256112021|ref|ZP_05452966.1| membrane-bound lytic murein transglycosylase B [Brucella melitensis
           bv. 3 str. Ether]
 gi|260564228|ref|ZP_05834713.1| lytic murein transglycosylase [Brucella melitensis bv. 1 str. 16M]
 gi|265989432|ref|ZP_06101989.1| lytic Murein transglycosylase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993467|ref|ZP_06106024.1| lytic Murein transglycosylase [Brucella melitensis bv. 3 str.
           Ether]
 gi|17984146|gb|AAL53265.1| membrane-bound lytic murein transglycosylase b [Brucella melitensis
           bv. 1 str. 16M]
 gi|260151871|gb|EEW86964.1| lytic murein transglycosylase [Brucella melitensis bv. 1 str. 16M]
 gi|262764337|gb|EEZ10369.1| lytic Murein transglycosylase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000101|gb|EEZ12791.1| lytic Murein transglycosylase [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 412

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L+  L   G  D      +   +   +A++ FQ R+GL+P G      L  +
Sbjct: 359 ELQTHLKALGYYDGKIDGKIGATSR--AALEAFQQRNGLEPDGHPSKEVLSVL 409


>gi|12643347|sp|Q9R0S2|MMP24_MOUSE RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
           Full=Matrix metalloproteinase-21; Short=MMP-21; AltName:
           Full=Membrane-type matrix metalloproteinase 5;
           Short=MT-MMP 5; Short=MTMMP5; AltName:
           Full=Membrane-type-5 matrix metalloproteinase;
           Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
           Full=Processed matrix metalloproteinase-24; Flags:
           Precursor
 gi|5689227|dbj|BAA82966.1| membrane-type-5 matrix metalloproteinase [Mus musculus]
          Length = 618

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P +  + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 58  LKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 110


>gi|13929064|ref|NP_113945.1| matrix metalloproteinase-24 [Rattus norvegicus]
 gi|20138812|sp|Q99PW6|MMP24_RAT RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
           Full=Membrane-type matrix metalloproteinase 5;
           Short=MT-MMP 5; Short=MTMMP5; AltName:
           Full=Membrane-type-5 matrix metalloproteinase;
           Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
           Full=Processed matrix metalloproteinase-24; Flags:
           Precursor
 gi|12862768|dbj|BAB32589.1| membrane-type matrix metalloproteinase 5 [Rattus norvegicus]
          Length = 618

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P +  + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 58  LKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 110


>gi|327269601|ref|XP_003219582.1| PREDICTED: matrix metalloproteinase-16-like [Anolis carolinensis]
          Length = 610

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 49  LQKYGYLPPTDPRMSVLRTAETMKSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 108

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 109 TRGNSRFNIRRKR 121


>gi|295836797|ref|ZP_06823730.1| membrane protein [Streptomyces sp. SPB74]
 gi|295826212|gb|EDY44462.2| membrane protein [Streptomyces sp. SPB74]
          Length = 454

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 33/109 (30%), Gaps = 8/109 (7%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGD-----LD 125
           S   +    K +A        G +P         G S   V RL E L+  G      + 
Sbjct: 349 SARYVPYRPKNLAGGSAGPQSGAFP--GAAAFGPGRSGPHVTRLGEMLVARGAGRSYRVG 406

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           P    + A D    +A +  Q   G    G+    T   +       +R
Sbjct: 407 PGPRWTEA-DRRATAAFQRAQGWRGTGADGIPGPRTWAYLVGGKGEDVR 454


>gi|118591608|ref|ZP_01549005.1| hypothetical protein SIAM614_28472 [Stappia aggregata IAM 12614]
 gi|118435936|gb|EAV42580.1| hypothetical protein SIAM614_28472 [Stappia aggregata IAM 12614]
          Length = 226

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 42/118 (35%)

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           +I R+   P W  P  +I +D                             E   W +  P
Sbjct: 119 KIGRMQEWPTWTPPPEMIARD----------------------------PESAKWANGMP 150

Query: 294 PNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                    G  N + +  +  Y  ++++ Y +H T +P          +SGC+R+ N
Sbjct: 151 G--------GPDNPLGARAMYLYVGNKDSIYRIHGTNQPWTIGLN---ISSGCIRLNN 197


>gi|281346656|gb|EFB22240.1| hypothetical protein PANDA_000051 [Ailuropoda melanoleuca]
          Length = 617

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%)

Query: 118 LIISGDLD-PSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  PS+ +S    A  + SA+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 4   LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKAWMKRPRCGVPDQ 63

Query: 172 RIRQLQVNLMRIK 184
               ++ NL R +
Sbjct: 64  FGVHVKANLRRRR 76


>gi|269955325|ref|YP_003325114.1| peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304006|gb|ACZ29556.1| Peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 212

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY----VESAVKLFQMRHGLD 152
           + I  +  G++   V+ L+  L + G    +    +A D       + A++  Q  H +D
Sbjct: 134 VTIGKVRKGDTGPDVRLLQGVLNVHGAGVAAGVGVLALDDDFGDKTDKALRAHQTAHKID 193

Query: 153 PSGMVDSSTLEAM 165
             G+  + +   +
Sbjct: 194 VDGVAGADSWRTL 206


>gi|302875048|ref|YP_003843681.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|307690333|ref|ZP_07632779.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|302577905|gb|ADL51917.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
          Length = 449

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
              P   L +G+S   V+ ++    R+ ++    P   ++  +DA   ++VK FQ    L
Sbjct: 330 QSFPGYALRIGSSGQPVRTVQTFLNRIAVNFPAIPKLAVTGVYDAKTATSVKKFQEVFKL 389

Query: 152 DPSGMVDSSTLEAM 165
             SG+VD +T  A+
Sbjct: 390 SQSGIVDYATWFAI 403


>gi|123090|sp|P22757|HE_PARLI RecName: Full=Hatching enzyme; Short=HE; Short=HEZ; AltName:
           Full=Envelysin; AltName: Full=Sea-urchin-hatching
           proteinase; Contains: RecName: Full=Hatching enzyme 18
           kDa form; Flags: Precursor
 gi|9996|emb|CAA37667.1| pre-pro-hatching enzyme [Paracentrotus lividus]
          Length = 587

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +V+ L+  L   G   P      A +    SA+  FQ   G++ +G++D+ T 
Sbjct: 93  EEGVHESNVEILKAHLEKFGYTPPGSTFGEA-NLNYTSAILDFQEHGGINQTGILDADTA 151

Query: 163 EAMNVP 168
           E ++ P
Sbjct: 152 ELLSTP 157


>gi|332525530|ref|ZP_08401685.1| peptidoglycan-binding domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332109095|gb|EGJ10018.1| peptidoglycan-binding domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 209

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 15/42 (35%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L    G +    A +   +  FQ   GL   G+    TL  +
Sbjct: 155 LQALDGETATDAASLARRIAGFQRARGLAVDGVAGPQTLMLL 196


>gi|119605820|gb|EAW85414.1| hCG15613, isoform CRA_b [Homo sapiens]
          Length = 235

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P         +   +  A+K+ Q   GL  +G +D  T+  M  P       
Sbjct: 36  LTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPDV 95

Query: 176 LQVN-LMRIKK 185
           L V  L+R ++
Sbjct: 96  LGVAGLVRRRR 106


>gi|331090375|ref|ZP_08339256.1| hypothetical protein HMPREF1025_02839 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330401122|gb|EGG80715.1| hypothetical protein HMPREF1025_02839 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 438

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L +I+G     P       + +    +V+ FQ    L  +
Sbjct: 354 PGYVLEIGSSGEKVRQIQEQLNVIAGAYPAIPKITADGIYGSKTAESVRKFQEVFQLPQT 413

Query: 155 GMVDSSTLE 163
           G VD ST  
Sbjct: 414 GKVDYSTWY 422


>gi|148378742|ref|YP_001253283.1| phage related N-acetylmuramoyl-L-alanine amidase [Clostridium
           botulinum A str. ATCC 3502]
 gi|153932011|ref|YP_001383128.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|153934498|ref|YP_001386678.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
 gi|148288226|emb|CAL82295.1| putative phage related N-acetylmuramoyl-L-alanine amidase
           [Clostridium botulinum A str. ATCC 3502]
 gi|152928055|gb|ABS33555.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|152930412|gb|ABS35911.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
          Length = 234

 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 22/56 (39%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             +V+ ++ +L   G      G+   F      AVK FQ    L   G+V  +T  
Sbjct: 174 DGNVKVIQSKLQNIGYSVGKFGVDGYFGDGTLLAVKCFQRDCNLMIDGIVGENTWN 229


>gi|83645431|ref|YP_433866.1| type II secretory pathway ATPase ExeA [Hahella chejuensis KCTC
           2396]
 gi|83633474|gb|ABC29441.1| Type II secretory pathway, component ExeA (predicted ATPase)
           [Hahella chejuensis KCTC 2396]
          Length = 600

 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           D    L    D  ++  V+ FQ   G+ P G+  + TL  +N
Sbjct: 543 DEKPSLEPLPDTSLKDRVRWFQQEVGILPDGIPGAITLIMLN 584


>gi|307941473|ref|ZP_07656828.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
 gi|307775081|gb|EFO34287.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
          Length = 1408

 Score = 36.7 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 116  ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +L   G    +            SAV+ FQ   GL  +G +D++ ++ +N 
Sbjct: 1356 TKLNALGFNAGAPDGQTG--PQTRSAVRAFQRSLGLPETGDIDAALIKELNG 1405


>gi|209919789|ref|YP_002293873.1| hypothetical protein ECSE_2598 [Escherichia coli SE11]
 gi|209913048|dbj|BAG78122.1| conserved hypothetical protein [Escherichia coli SE11]
          Length = 197

 Score = 36.7 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)

Query: 133 AFDAYVESAVKL----FQMRHGLDPSGMVDSSTLEA 164
            FDA V+  VK      Q   G+D  G+V  +T  A
Sbjct: 107 VFDAAVQHGVKRAIQILQAAAGVDDDGIVGKNTRAA 142


>gi|119489741|ref|ZP_01622499.1| putative hydrolase [Lyngbya sp. PCC 8106]
 gi|119454315|gb|EAW35465.1| putative hydrolase [Lyngbya sp. PCC 8106]
          Length = 435

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G +   VQ L+  L   G       +   F    ++A+  FQ   GL   G+ +  T 
Sbjct: 192 TVGTTGSKVQDLQSLLKNRGF--DPGSIDGIFGNGTKTAILKFQKSKGLAEDGIANLKTW 249

Query: 163 EAM 165
            A+
Sbjct: 250 TAL 252


>gi|109127347|ref|XP_001091146.1| PREDICTED: matrix metalloproteinase-25 [Macaca mulatta]
          Length = 562

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P         +   +  A+K+ Q   GL  +G +D  T+  M  P       
Sbjct: 36  LTRYGYLPPPNPAQAQLQSPAKLRDAIKVMQRFAGLPETGRMDPETVATMRKPRCSLPDV 95

Query: 176 LQVN-LMRIKK 185
           L V  L+R ++
Sbjct: 96  LGVAGLVRRRR 106


>gi|110634376|ref|YP_674584.1| lytic murein transglycosylase [Mesorhizobium sp. BNC1]
 gi|110285360|gb|ABG63419.1| lytic murein transglycosylase [Chelativorans sp. BNC1]
          Length = 394

 Score = 36.7 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P    R    G    +++ L+++L   G         + F+     AV+  Q+R GL 
Sbjct: 322 GAPAFDARNPEQGLEPENMKILQQKLQALGYHVGEVDGILGFNTR--EAVRQEQLRQGLP 379

Query: 153 PSG 155
             G
Sbjct: 380 ADG 382


>gi|209547818|ref|YP_002279735.1| peptidoglycan-binding protein [Rhizobium leguminosarum bv. trifolii
            WSM2304]
 gi|209533574|gb|ACI53509.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
            trifolii WSM2304]
          Length = 1260

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 106  NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   +V+ ++  L  +G    +        A   +A+K FQ   G +P G V  +T++A+
Sbjct: 1192 DMKKAVRNIQAILNNNGF--DAGTPDGEMGAKTVTAIKNFQKSIGQEPDGKVTDATVKAL 1249


>gi|159184697|ref|NP_354301.2| hypothetical protein Atu1293 [Agrobacterium tumefaciens str. C58]
 gi|159139986|gb|AAK87086.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 412

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           L        +LV+    SL   ENG++   S V  G+   +TP
Sbjct: 22  LAADSRSLQILVSKSDQSLSLYENGEIIATSKVSTGKAGHETP 64


>gi|86356208|ref|YP_468100.1| putative hemagglutinin protein [Rhizobium etli CFN 42]
 gi|86280310|gb|ABC89373.1| putative hemagglutinin protein [Rhizobium etli CFN 42]
          Length = 1249

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 136  AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            A   +A+K FQ   G  P G V  +T++A+
Sbjct: 1209 AKTVAAIKSFQKSIGQAPDGKVTDATVKAL 1238


>gi|317502111|ref|ZP_07960292.1| spore cortex-lytic enzyme SleC [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316896500|gb|EFV18590.1| spore cortex-lytic enzyme SleC [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 438

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L +I+G     P       + +    +V+ FQ    L  +
Sbjct: 354 PGYVLEIGSSGEKVRQIQEQLNVIAGAYPAIPKITADGIYGSKTAESVRKFQEVFQLPQT 413

Query: 155 GMVDSSTLE 163
           G VD ST  
Sbjct: 414 GKVDYSTWY 422


>gi|224077434|ref|XP_002187137.1| PREDICTED: similar to matrix metalloproteinase 24 preproprotein
           (predicted) [Taeniopygia guttata]
          Length = 596

 Score = 36.7 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L PS        +   V+SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 36  LKTYGYLLPSDSQMSPLQSGKAVQSAVATMQQFYGIPVTGVLDQTTIEWMKKP 88


>gi|284046107|ref|YP_003396447.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
 gi|283950328|gb|ADB53072.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
          Length = 261

 Score = 36.7 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 20/77 (25%)

Query: 162 LEAMNVPVDLR---------IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
              + V +  R            +++  +R +           V V++ A    A  +G+
Sbjct: 108 RLWLRVALPERPNGRSGWIDADAVRLAPVRWR-----------VEVDVDARRAAAFHDGR 156

Query: 213 VGLRSTVIVGRVDRQTP 229
                 V+VG     TP
Sbjct: 157 EVRSWRVVVGAPGTVTP 173


>gi|254438235|ref|ZP_05051729.1| lytic murein transglycosylase subfamily, putative [Octadecabacter
           antarcticus 307]
 gi|198253681|gb|EDY77995.1| lytic murein transglycosylase subfamily, putative [Octadecabacter
           antarcticus 307]
          Length = 398

 Score = 36.7 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L+ RL   G       +     A  E+A++ FQ R  L  +G+  +  L A+
Sbjct: 348 LQRRLAARGY--DIGTIDGVVGAKTEAAIRDFQRRQRLAVTGIATADVLVAL 397


>gi|296214500|ref|XP_002753656.1| PREDICTED: matrix metalloproteinase-14 [Callithrix jacchus]
          Length = 582

 Score = 36.7 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +         A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPKSFSEAIAAMQKFYGLQVTGKADADTIKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|332525314|ref|ZP_08401482.1| peptidoglycan-binding domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332108591|gb|EGJ09815.1| peptidoglycan-binding domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 201

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
            FQ+ HGL P G     TL  +       + +L +
Sbjct: 165 AFQVAHGLQPDGRAGPLTLMQILRADGETVPRLAL 199


>gi|291242301|ref|XP_002741046.1| PREDICTED: matrix metalloproteinase, putative-like [Saccoglossus
           kowalevskii]
          Length = 567

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G +D      V  D     AV  FQ   GL+ +G  D +TL  MN P
Sbjct: 71  LYHYGYMDIHHNAIVTED-TFTDAVSRFQAFVGLEITGKADEATLAMMNAP 120


>gi|149187605|ref|ZP_01865902.1| phospho-beta-glucosidase B [Vibrio shilonii AK1]
 gi|148838485|gb|EDL55425.1| phospho-beta-glucosidase B [Vibrio shilonii AK1]
          Length = 463

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 26/78 (33%), Gaps = 7/78 (8%)

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL-MRIKKLLEQKMGLRYVL 197
             AVKL Q    + P G + +  L A+N P       +   +    K L    +  R   
Sbjct: 207 AKAVKLCQK---IVPDGKIGNMLLGALNYPYTCNPDDVIAAMHENNKWLFFGDVQTRGQY 263

Query: 198 VNIPAASLEAVENGKVGL 215
              P   L      ++ L
Sbjct: 264 ---PGYMLRYFRENQIEL 278


>gi|229543921|ref|ZP_04432980.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus coagulans 36D1]
 gi|229325060|gb|EEN90736.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus coagulans 36D1]
          Length = 167

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 54/178 (30%), Gaps = 68/178 (38%)

Query: 183 IKKLLEQ---KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP--ILHSRINR 237
           +           G   ++VN     L  +  GKV L + V  G+ +  TP          
Sbjct: 13  LSVWPADGHVAPGDPLIIVNKTTNRLAWIRGGKVRLETPVATGKTNDLTPEGFF------ 66

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
                      +I  K       ++P Y +  NI                          
Sbjct: 67  -----------TIKVK------AKNPYY-RKKNI-------------------------- 82

Query: 298 FRQDPG--KINAMASTKIEFYSRNN---TY-MHDTPEPILFNNVVRFETSGCVRVRNI 349
               PG    N + S  I F +R      Y +H T  P    ++ R+ ++GC+R+   
Sbjct: 83  ----PGGDPRNPLGSRWIGFDARGTDGRIYGLHGTNNP---ASIGRYISNGCIRLPKA 133


>gi|284047124|ref|YP_003397464.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
 gi|283951345|gb|ADB54089.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
          Length = 273

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 22/64 (34%), Gaps = 12/64 (18%)

Query: 169 VDLRIRQLQ---VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
            + R   +    V L R +  L    G R          L    +G +  R+ ++VG   
Sbjct: 129 PNARAGWIAARDVRLSRTRWYLSVSTGRR---------ELRVYSDGTLRRRARLVVGAPA 179

Query: 226 RQTP 229
             TP
Sbjct: 180 TPTP 183


>gi|226947822|ref|YP_002802913.1| YbfG [Clostridium botulinum A2 str. Kyoto]
 gi|226840753|gb|ACO83419.1| YbfG [Clostridium botulinum A2 str. Kyoto]
          Length = 695

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVS--VQRLRERLIISGDL 124
           + S++T     KA+   +     G W        P   G++S    V  L+  L ++G +
Sbjct: 167 VYSRDTNRALIKALQVEEGTTPDGIWGPGTQDKCPTIPGSNSNQRYVLLLQYSLYVNG-I 225

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           DP  G    F   + +A+K FQ    L   G        ++ V    
Sbjct: 226 DP-NGFDGLFGNGLSNAIKEFQSFCALPADGYAGKQVWASLLVSTGD 271


>gi|223985277|ref|ZP_03635358.1| hypothetical protein HOLDEFILI_02664 [Holdemania filiformis DSM
           12042]
 gi|223962761|gb|EEF67192.1| hypothetical protein HOLDEFILI_02664 [Holdemania filiformis DSM
           12042]
          Length = 534

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           G     V  +R R+   G L+ +K  + A D  +   VK+F
Sbjct: 430 GGQGPDVSAIRNRVHSEGSLNLTKYNNPALDEALNEGVKVF 470


>gi|206599910|ref|YP_002241715.1| gp30 [Mycobacterium phage Fruitloop]
 gi|206286998|gb|ACI12344.1| gp30 [Mycobacterium phage Fruitloop]
          Length = 332

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 8/72 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH--------GLDP 153
           L  G+ S  +++++  +        +   +  +D  + + V   Q R+        GL  
Sbjct: 10  LGPGDRSDEIRKIKAFMRRKFSYAATLADTEFYDEAMAAVVAEMQSRYNTAGQLRDGLYI 69

Query: 154 SGMVDSSTLEAM 165
            G+V + T   M
Sbjct: 70  PGIVGAETKYVM 81


>gi|168177934|ref|ZP_02612598.1| putative peptidoglycan binding domain protein [Clostridium
           botulinum NCTC 2916]
 gi|182670965|gb|EDT82939.1| putative peptidoglycan binding domain protein [Clostridium
           botulinum NCTC 2916]
          Length = 695

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVS--VQRLRERLIISGDL 124
           + S++T     KA+   +     G W        P   G++S    V  L+  L ++G +
Sbjct: 167 VYSRDTNRALIKALQVEEGTTPDGIWGPGTQDKCPTIPGSNSNQRYVLLLQYSLYVNG-I 225

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           DP  G    F   + +A+K FQ    L   G        ++ V    
Sbjct: 226 DP-NGFDGLFGNGLSNAIKEFQSFCALPADGYAGKQVWASLLVSTGD 271


>gi|29565799|ref|NP_817371.1| gp33 [Mycobacterium phage Che8]
 gi|29424524|gb|AAN12431.1| gp33 [Mycobacterium phage Che8]
          Length = 333

 Score = 36.7 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 17/77 (22%)

Query: 102 LHLGNSSVSVQRL----RERLI-ISGDLDPSKGLSVAFDAYVESAVKLFQMRH---GLDP 153
           L  G+SS  ++R+    R++    +GDL      +  +D  + +AV   Q R+   GL  
Sbjct: 10  LGPGDSSEEIRRIKTFMRKKFASYAGDL----ADTPLYDEQMTAAVAEMQARYNAAGLLR 65

Query: 154 S-----GMVDSSTLEAM 165
                 G+V + T   M
Sbjct: 66  DGLYIPGIVGAETKYVM 82


>gi|229551613|ref|ZP_04440338.1| ErfK/YbiS/YcfS/YnhG protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315017|gb|EEN80990.1| ErfK/YbiS/YcfS/YnhG protein [Lactobacillus rhamnosus LMS2-1]
          Length = 551

 Score = 36.7 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           +  +G  YV V+        +++GKV + S ++ G+  + TP
Sbjct: 422 DGDIGNTYVEVSKEKQHEWYIKDGKVVMDSDIVTGKPGQDTP 463


>gi|209524890|ref|ZP_03273436.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209494769|gb|EDZ95078.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 606

 Score = 36.7 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           +++ RLI  G L+P   +   F     +A + FQ    +  SG++ S T + +     +R
Sbjct: 114 QIQTRLIDLGLLEP--PVDGIFGPLSTAAFRRFQELMNISESGILGSETAKKLIETTTIR 171

Query: 173 IRQLQV 178
              +++
Sbjct: 172 RENMRL 177


>gi|332800388|ref|YP_004461887.1| peptidoglycan-binding domain 1 protein [Tepidanaerobacter sp. Re1]
 gi|332698123|gb|AEE92580.1| Peptidoglycan-binding domain 1 protein [Tepidanaerobacter sp. Re1]
          Length = 413

 Score = 36.7 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 12/107 (11%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    +PL  G+    +Q++ +RL +      +  +   F      AV+ FQ    +  +
Sbjct: 12  PLKKQKPLLKGSDVRHLQQVLKRLGVF-----NARIDGVFGYETMQAVREFQRAFHIKQN 66

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           G+VD    E +          ++  + + + +        Y  V IP
Sbjct: 67  GIVDDDEFEIL-------KELMRCGINKWRTIQRDYRHSGYSPVPIP 106


>gi|194302980|ref|YP_002014249.1| gp33 [Mycobacterium phage Boomer]
 gi|194153028|gb|ACF34095.1| gp33 [Mycobacterium phage Boomer]
          Length = 333

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 17/77 (22%)

Query: 102 LHLGNSSVSVQRLRERLIIS-----GDLDPSKGLSVAFDAYVESAVKLFQMRH------- 149
           L LG+SS  +++++  +        GDL      +  +D  + +AV   Q R+       
Sbjct: 10  LGLGDSSDEIRKIKAFMRRKFASYAGDL----ADTPLYDEAMTAAVAEMQARYSAAGQLR 65

Query: 150 -GLDPSGMVDSSTLEAM 165
            GL   G+V + T   M
Sbjct: 66  AGLYIPGIVGAETKYVM 82


>gi|194037087|ref|XP_001926652.1| PREDICTED: matrix metalloproteinase-16 [Sus scrofa]
          Length = 607

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|73999559|ref|XP_544165.2| PREDICTED: similar to matrix metalloproteinase 16 isoform 1 [Canis
           familiaris]
          Length = 595

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            +++A+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 35  LQKYGYLPPTDPRMSVLRSAETMQAALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 94

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 95  TRGSSKFNIRRKR 107


>gi|320528722|ref|ZP_08029874.1| peptidase [Solobacterium moorei F0204]
 gi|320130932|gb|EFW23510.1| peptidase [Solobacterium moorei F0204]
          Length = 513

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 2/48 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L   G           F +  E A++ F+   G+   G++D  T   +
Sbjct: 441 LDYLGY--SVGRTDGYFSSQTEDALRQFETDKGIKADGVLDKETFSTL 486


>gi|194430082|ref|ZP_03062586.1| conserved hypothetical protein [Escherichia coli B171]
 gi|194411853|gb|EDX28171.1| conserved hypothetical protein [Escherichia coli B171]
          Length = 186

 Score = 36.7 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)

Query: 133 AFDAYVESAVKL----FQMRHGLDPSGMVDSSTLEA 164
            FDA V+  VK      Q   G+D  G+V  +T  A
Sbjct: 96  VFDAAVQHGVKRAIQILQAAAGVDDDGIVGKNTRAA 131


>gi|199598795|ref|ZP_03212207.1| hypothetical protein LRH_04909 [Lactobacillus rhamnosus HN001]
 gi|258509519|ref|YP_003172270.1| ErfK/YbiS/YcfS/YnhG family protein [Lactobacillus rhamnosus GG]
 gi|199590300|gb|EDY98394.1| hypothetical protein LRH_04909 [Lactobacillus rhamnosus HN001]
 gi|257149446|emb|CAR88419.1| ErfK/YbiS/YcfS/YnhG family protein [Lactobacillus rhamnosus GG]
 gi|259650787|dbj|BAI42949.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
          Length = 456

 Score = 36.7 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           +  +G  YV V+        +++GKV + S ++ G+  + TP
Sbjct: 327 DGDIGNTYVEVSKEKQHEWYIKDGKVVMDSDIVTGKPGQDTP 368


>gi|149721274|ref|XP_001487888.1| PREDICTED: matrix metallopeptidase 16 (membrane-inserted) [Equus
           caballus]
          Length = 607

 Score = 36.7 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|4996355|dbj|BAA78420.1| membrane-type-3 matrix metalloproteinase [Mus musculus]
          Length = 607

 Score = 36.7 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|258540719|ref|YP_003175218.1| ErfK/YbiS/YcfS/YnhG family protein [Lactobacillus rhamnosus Lc 705]
 gi|257152395|emb|CAR91367.1| ErfK/YbiS/YcfS/YnhG family protein [Lactobacillus rhamnosus Lc 705]
          Length = 456

 Score = 36.7 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           +  +G  YV V+        +++GKV + S ++ G+  + TP
Sbjct: 327 DGDIGNTYVEVSKEKQHEWYIKDGKVVMDSDIVTGKPGQDTP 368


>gi|254504281|ref|ZP_05116432.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222440352|gb|EEE47031.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 210

 Score = 36.7 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMV 157
            RP+        V+  +E L   G       +        ++AV  +Q +H  L   G++
Sbjct: 74  ARPVPPSAPDPVVREAQEALTRFGF--DPGVIDGWMGHRTKAAVLAYQRQHPDLVNDGII 131

Query: 158 DSSTLEAM 165
             +TL  +
Sbjct: 132 GPATLVQL 139


>gi|254562448|ref|YP_003069543.1| membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens DM4]
 gi|254269726|emb|CAX25698.1| putative membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens DM4]
          Length = 393

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 7/72 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP    R          ++RL+  L   G     +         +  AV+ +Q+R GL  
Sbjct: 325 WPNGAARL-----DGPGLKRLQVGLAAKGLYAGEQDGRAG--PKLREAVRQYQIREGLPA 377

Query: 154 SGMVDSSTLEAM 165
            G    + LE +
Sbjct: 378 DGYARPALLERL 389


>gi|149045489|gb|EDL98489.1| matrix metalloproteinase 16, isoform CRA_a [Rattus norvegicus]
 gi|149045490|gb|EDL98490.1| matrix metalloproteinase 16, isoform CRA_a [Rattus norvegicus]
          Length = 607

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|40254544|ref|NP_062698.2| matrix metalloproteinase-16 precursor [Mus musculus]
 gi|34785576|gb|AAH57926.1| Matrix metallopeptidase 16 [Mus musculus]
 gi|122889875|emb|CAM13981.1| matrix metalloproteinase 16 [Mus musculus]
 gi|123229799|emb|CAM18851.1| matrix metalloproteinase 16 [Mus musculus]
 gi|148673638|gb|EDL05585.1| matrix metallopeptidase 16, isoform CRA_a [Mus musculus]
 gi|148673640|gb|EDL05587.1| matrix metallopeptidase 16, isoform CRA_a [Mus musculus]
          Length = 607

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|325292655|ref|YP_004278519.1| hypothetical protein AGROH133_05714 [Agrobacterium sp. H13-3]
 gi|325060508|gb|ADY64199.1| hypothetical protein AGROH133_05714 [Agrobacterium sp. H13-3]
          Length = 412

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           L        ++V+    SL   ENG++   S V  G+   +TP
Sbjct: 22  LAADNKSLQIVVSKSDQSLALYENGEIVATSKVSTGKAGHETP 64


>gi|195120101|ref|XP_002004567.1| GI19538 [Drosophila mojavensis]
 gi|193909635|gb|EDW08502.1| GI19538 [Drosophila mojavensis]
          Length = 588

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 22/123 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D +   SA++ FQ   GL+ +G +D  TL+ M++P     
Sbjct: 40  LSQFGYLPASARNPANSGLQDKHTWVSAIEEFQSFAGLNITGELDEETLKLMSLPRCGVR 99

Query: 169 -----VDLRIRQLQVNLMRIK--------KLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
                 D R ++  +   R +            +++    V   I  A     E+  +  
Sbjct: 100 DRVGTGDSRAKRYALQGSRWRVKNLTYKISKYPKRLKRNDVDAEIARAFAVWSEDTDLTF 159

Query: 216 RST 218
              
Sbjct: 160 TRK 162


>gi|157110203|ref|XP_001650998.1| hypothetical protein AaeL_AAEL000790 [Aedes aegypti]
 gi|108883949|gb|EAT48174.1| conserved hypothetical protein [Aedes aegypti]
          Length = 102

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L  S   +        ++ AV+LFQ    LDP+G +D  TLE M +P
Sbjct: 3   LMEFGYLPKSNIETGNLRTMEQLQEAVRLFQNFANLDPTGKIDQDTLELMRMP 55


>gi|3182966|sp|O35548|MMP16_RAT RecName: Full=Matrix metalloproteinase-16; Short=MMP-16; AltName:
           Full=Membrane-type matrix metalloproteinase 3;
           Short=MT-MMP 3; Short=MTMMP3; AltName:
           Full=Membrane-type-3 matrix metalloproteinase;
           Short=MT3-MMP; Short=MT3MMP; Flags: Precursor
 gi|2424975|dbj|BAA22224.1| MT3-MMP [Rattus rattus]
          Length = 607

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|83944388|ref|ZP_00956842.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. EE-36]
 gi|83953429|ref|ZP_00962151.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83842397|gb|EAP81565.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83844711|gb|EAP82594.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. EE-36]
          Length = 183

 Score = 36.7 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 8/58 (13%)

Query: 300 QDPGKINAMA-STKIEFYSRNNTYM--HDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
           Q  G  N +       F +  +TY   H T +P    ++ R  ++GC+R+   ++ DL
Sbjct: 116 QPGGPSNPLGARALYLFQNGRDTYFRIHGTTQPS---SIGRSVSNGCIRMLNEHVKDL 170


>gi|20141616|sp|Q9WTR0|MMP16_MOUSE RecName: Full=Matrix metalloproteinase-16; Short=MMP-16; AltName:
           Full=Membrane-type matrix metalloproteinase 3;
           Short=MT-MMP 3; Short=MTMMP3; AltName:
           Full=Membrane-type-3 matrix metalloproteinase;
           Short=MT3-MMP; Short=MT3MMP; Flags: Precursor
 gi|10444090|gb|AAG17704.1|AF282844_1 matrix metalloproteinase 16 [Mus musculus]
          Length = 607

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|288958596|ref|YP_003448937.1| lytic murein transglycosylase [Azospirillum sp. B510]
 gi|288910904|dbj|BAI72393.1| lytic murein transglycosylase [Azospirillum sp. B510]
          Length = 425

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           RG WP    R     +    +  L++RL   G ++P     +   A   +AV+ FQ   G
Sbjct: 354 RGSWP----REEQALSKDERI-DLQQRLAALG-MEPGTADGIV-GANTRNAVRRFQASVG 406

Query: 151 LDPSGMVDSSTLEAM 165
             P G    + L+ +
Sbjct: 407 EIPDGFATKALLDRL 421


>gi|146338180|ref|YP_001203228.1| putative ErfK/YbiS/YcfS/YnhG [Bradyrhizobium sp. ORS278]
 gi|146190986|emb|CAL74991.1| conserved hypothetical protein, putative ErfK/YbiS/YcfS/YnhG
           precursor [Bradyrhizobium sp. ORS278]
          Length = 211

 Score = 36.7 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                 +  R   G  N + +  I  Y  +++  Y +H T +P          +SGC+R+
Sbjct: 116 QARLGPYPKRVAGGPANPLGARAIYLYEGNKDTLYRIHGTNQPEYIGQ---AISSGCIRM 172

Query: 347 RN 348
            N
Sbjct: 173 TN 174


>gi|152968159|ref|YP_001363943.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
 gi|151362676|gb|ABS05679.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
          Length = 878

 Score = 36.7 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 69/206 (33%), Gaps = 33/206 (16%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR--GGWPEL 97
           I+E   ++   R +      +          S+  +      +A  Q+ L+     W + 
Sbjct: 412 IDELRRAVDRMRMEELALSKEED------AASRNRLETLRAQLADKQEQLTALTARWEQE 465

Query: 98  PIRPLHLGNSSVSVQRLR---ERLIISGDLDPSK----GLSVAFDAYVESAVKLFQ---M 147
                 +G+    V  LR   ERL   GDL  +     G   A +A +  A    Q    
Sbjct: 466 KAGLNRVGDLKHQVDELRSQAERLQREGDLGRASEILYGRIPALEAELRQAQAAEQDAPA 525

Query: 148 RHGLDPSGMVDSSTLE-----AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           +  +     V    +         +P     R L+    ++ + +E+ +G R +      
Sbjct: 526 QAPMVAD-EVGPDDIAEVIAGWTGIPAG---RILEGETEKLLR-MEEFLGARLIGQTTA- 579

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQT 228
             ++AV +     RS   V   DR T
Sbjct: 580 --VQAVSD--AVRRSRAGVNDPDRPT 601


>gi|182680540|ref|YP_001834686.1| lytic murein transglycosylase [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182636423|gb|ACB97197.1| lytic murein transglycosylase [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 419

 Score = 36.7 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 6/72 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP         G S    + ++  L+  G     K   V        A+  FQ RHGL P
Sbjct: 352 WPTDD-----PGLSRAERREVQALLMRQGYDLDGKADGVIGTKS-RQAISDFQQRHGLAP 405

Query: 154 SGMVDSSTLEAM 165
           +G   +S L A+
Sbjct: 406 NGRASASVLAAL 417


>gi|297683237|ref|XP_002819299.1| PREDICTED: matrix metalloproteinase-16-like, partial [Pongo abelii]
          Length = 449

 Score = 36.7 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P
Sbjct: 252 LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKP 304


>gi|147807821|emb|CAN73130.1| hypothetical protein VITISV_030258 [Vitis vinifera]
          Length = 437

 Score = 36.7 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGL--------SVAFDAYVESAVKLFQMRHGLDPSGMV 157
           +    + +L++ L   G L  +              FD  +ESA+K +Q  + L  +G +
Sbjct: 56  DKVKGIHKLKKYLEQFGYLSYNSHSKNQIRTDDDDYFDDLLESAIKSYQTNYHLKATGKL 115

Query: 158 DSSTLEAM 165
           DS T+  M
Sbjct: 116 DSETVSEM 123


>gi|94496487|ref|ZP_01303064.1| ErfK/YbiS/YcfS/YnhG [Sphingomonas sp. SKA58]
 gi|94424233|gb|EAT09257.1| ErfK/YbiS/YcfS/YnhG [Sphingomonas sp. SKA58]
          Length = 347

 Score = 36.7 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 8/59 (13%)

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            PG    +    I+    +  Y +H TPEP     + R E+ GC+R+ N     L   +
Sbjct: 284 KPGPNGPVGVVWIDLSKDH--YGIHGTPEP---QTIGRTESHGCIRLTNWDAARLAQMV 337


>gi|332671430|ref|YP_004454438.1| peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
 gi|332340468|gb|AEE47051.1| Peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
          Length = 353

 Score = 36.7 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 18/51 (35%), Gaps = 2/51 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           R L  G+    V RL+  L   G  D        F + +  AV  F    G
Sbjct: 122 RVLRPGDQGEDVARLQRFLTGLGLYDGRADG--RFGSALGRAVARFNADAG 170


>gi|255552738|ref|XP_002517412.1| Matrix metalloproteinase, putative [Ricinus communis]
 gi|223543423|gb|EEF44954.1| Matrix metalloproteinase, putative [Ricinus communis]
          Length = 321

 Score = 36.7 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 7/73 (9%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA-------YVESAVKLFQMRHGLDPSG 155
           H G+    V  L++ L   G L  +K  S A +         +ESA++ +Q+ + L+ SG
Sbjct: 45  HKGDKLKGVGELKKYLKHFGYLSYNKNQSHANEDDDDDFDDPLESAIRTYQLNYHLNVSG 104

Query: 156 MVDSSTLEAMNVP 168
           ++DS T   M +P
Sbjct: 105 LLDSETASKMMMP 117


>gi|148673639|gb|EDL05586.1| matrix metallopeptidase 16, isoform CRA_b [Mus musculus]
          Length = 448

 Score = 36.7 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 80  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 139

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 140 TRGSSKFNIRRKR 152


>gi|83745679|ref|ZP_00942737.1| Membrane-bound lytic murein transglycosylase B [Ralstonia
           solanacearum UW551]
 gi|83727756|gb|EAP74876.1| Membrane-bound lytic murein transglycosylase B [Ralstonia
           solanacearum UW551]
          Length = 427

 Score = 36.4 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           N++  +QRL+++L   G  DP     +  D   + A++ +Q  H L   G    S L  +
Sbjct: 368 NNAADIQRLQQKLTDRGY-DPGTIDGIIGDRT-QQAIRAYQKDHQLPQDGYASRSLLARL 425


>gi|282555166|gb|ADA82682.1| L,D-transpeptidase [Candidatus Blochmannia sayi]
          Length = 310

 Score = 36.4 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 35/135 (25%), Gaps = 39/135 (28%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L    +N    +   + +G ++  TP    + I     NP W IP   ++ 
Sbjct: 100 IVINNAEMRLYYYPKNNNTVIVLPIAIGTIENATPSPWRTSIKHKKKNPIW-IPTKNMRD 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           + +   +  P                                       G  N M S  +
Sbjct: 159 EYIKHGKTLPAIF----------------------------------PAGPNNPMGSYAL 184

Query: 314 EFYSRNNTYMHDTPE 328
                     H T  
Sbjct: 185 YLGXNYAI--HGTNS 197


>gi|198420540|ref|XP_002122510.1| PREDICTED: similar to Serine/threonine-protein kinase Nek1
           (NimA-related protein kinase 1) (Renal carcinoma antigen
           NY-REN-55) [Ciona intestinalis]
          Length = 1378

 Score = 36.4 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           + A+      R + LQ N+ R +++L+ K   R    N+  A      + +  
Sbjct: 606 IAALQQQAADRAQLLQKNMERRREILDAKDEERKKHGNMAKARGVVHPDERPV 658


>gi|167645239|ref|YP_001682902.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter sp. K31]
 gi|167347669|gb|ABZ70404.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter sp. K31]
          Length = 370

 Score = 36.4 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 301 DPGKINAMASTKIEFY-SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLL 357
             G  N + ST I+          H TP+P L N   R  + GCVR+ N    +L   ++
Sbjct: 303 KAGPNNPVGSTWIDLTKDTYGI--HGTPDPRLVNK--RA-SHGCVRLTNWDAAELGKAVV 357

Query: 358 KDTP 361
           K   
Sbjct: 358 KGAK 361


>gi|121997021|ref|YP_001001808.1| lytic murein transglycosylase [Halorhodospira halophila SL1]
 gi|121588426|gb|ABM61006.1| lytic murein transglycosylase [Halorhodospira halophila SL1]
          Length = 395

 Score = 36.4 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 101 PLHLG---NSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKLFQMRHGLDPSGM 156
           PL  G   + +     LR+   +  +L    G           +A++ +Q   GL   G 
Sbjct: 322 PLRAGFPDDPAPRRSELRQAQEVLNELGFDAGTPDGLLGPRTRAALRAYQQDQGLPADGY 381

Query: 157 VDSSTLEAM 165
            D   LE +
Sbjct: 382 PDPKILERL 390


>gi|85703691|ref|ZP_01034795.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
 gi|85672619|gb|EAQ27476.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
          Length = 156

 Score = 36.4 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 24/94 (25%), Gaps = 24/94 (25%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM-- 323
           L       +  K                P+      PG  N +          +  Y+  
Sbjct: 59  LTRRGYTEVVRKRVGPDWTPTQSMRERDPSLPAYMPPGPGNPLG--------THALYLSW 110

Query: 324 --------HDTPEPILFNNVVRFETSGCVRVRNI 349
                   HDT        + R  +SGC+ + N 
Sbjct: 111 PAYLVHGTHDT------RKIGRQSSSGCIGLYNP 138


>gi|225628068|ref|ZP_03786103.1| ErfK/YbiS/YcfS/YnhG domain protein [Brucella ceti str. Cudo]
 gi|225616893|gb|EEH13940.1| ErfK/YbiS/YcfS/YnhG domain protein [Brucella ceti str. Cudo]
          Length = 526

 Score = 36.4 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 43/151 (28%), Gaps = 45/151 (29%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           ENGK+ +     +G  D  +                  P  I+Q +    +  +P Y  +
Sbjct: 408 ENGKLVVAYPSTIGSSDNPS------------------PSGIVQVE---RIAINPNYTYN 446

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNTYMHDTP 327
             I+       +V                    PG    + +  I           H TP
Sbjct: 447 PKINFKQGNNDKVLTI----------------PPGPNGPVGTVWIALSKPTYGI--HGTP 488

Query: 328 EPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            P          + GCVR+ N    +L   +
Sbjct: 489 APSRIGKTS---SHGCVRLTNWDAEELAKLV 516


>gi|309776368|ref|ZP_07671355.1| putative N-acetylmuramoyl-L-alanine amidase [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308915887|gb|EFP61640.1| putative N-acetylmuramoyl-L-alanine amidase [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 168

 Score = 36.4 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 19/37 (51%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   + +   + V+ FQ  + L+  G++  +T +A+
Sbjct: 125 PVDGMYGSRTTTMVQQFQYLYDLNIDGVIGKATWDAI 161


>gi|11968059|ref|NP_071913.1| matrix metalloproteinase-25 preproprotein [Homo sapiens]
 gi|12585274|sp|Q9NPA2|MMP25_HUMAN RecName: Full=Matrix metalloproteinase-25; Short=MMP-25; AltName:
           Full=Leukolysin; AltName: Full=Membrane-type matrix
           metalloproteinase 6; Short=MT-MMP 6; Short=MTMMP6;
           AltName: Full=Membrane-type-6 matrix metalloproteinase;
           Short=MT6-MMP; Short=MT6MMP; Flags: Precursor
 gi|8052552|gb|AAF66697.2|AF145442_1 leukolysin [Homo sapiens]
 gi|10441358|gb|AAG17007.1|AF185270_1 leukolysin [Homo sapiens]
 gi|8546817|emb|CAB94713.1| matrix metalloproteinase-25 [Homo sapiens]
 gi|9798454|emb|CAC03490.1| membrane type matrix metalloproteinase number 6 [Homo sapiens]
 gi|119605819|gb|EAW85413.1| hCG15613, isoform CRA_a [Homo sapiens]
 gi|119605821|gb|EAW85415.1| hCG15613, isoform CRA_a [Homo sapiens]
 gi|189442380|gb|AAI67800.1| Matrix metallopeptidase 25 [synthetic construct]
          Length = 562

 Score = 36.4 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P         +   +  A+K+ Q   GL  +G +D  T+  M  P       
Sbjct: 36  LTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPDV 95

Query: 176 LQVN-LMRIKK 185
           L V  L+R ++
Sbjct: 96  LGVAGLVRRRR 106


>gi|170749343|ref|YP_001755603.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170655865|gb|ACB24920.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 370

 Score = 36.4 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 10/65 (15%)

Query: 301 DPGKINAMASTKIEF--YSRNNTYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWL 356
             G  N +    I+           H TPEP     V + E+ GC+R+   N  DL   +
Sbjct: 306 QSGPNNPVGLVWIDLAIP-SYGI--HGTPEP---EKVGKTESHGCIRLTNWNARDLAAHV 359

Query: 357 LKDTP 361
            +   
Sbjct: 360 TRGAK 364


>gi|163744654|ref|ZP_02152014.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanibulbus
           indolifex HEL-45]
 gi|161381472|gb|EDQ05881.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanibulbus
           indolifex HEL-45]
          Length = 187

 Score = 36.4 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 6/50 (12%)

Query: 300 QDPGKINAMA-STKIEFYSRNNTYM--HDTPEPILFNNVVRFETSGCVRV 346
           Q  G  N +       F +  +TY   H T +P   N++ R  ++GC+R+
Sbjct: 120 QPGGPGNPLGARALYLFQNGRDTYFRIHGTTQP---NSIGRSVSNGCIRM 166


>gi|45382789|ref|NP_989998.1| matrix metalloproteinase-9 [Gallus gallus]
 gi|12043935|gb|AAG47650.1|AF222690_1 75 kDa gelatinase [Gallus gallus]
          Length = 686

 Score = 36.4 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 28/51 (54%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G +  ++    +    +  A++  Q + GL+ +G +D+STLEAM  P
Sbjct: 47  LLRFGYIQEAEVRRSSKHVSLAKALRRMQKQLGLEETGELDASTLEAMRAP 97


>gi|332240134|ref|XP_003269245.1| PREDICTED: matrix metalloproteinase-25 [Nomascus leucogenys]
          Length = 567

 Score = 36.4 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P         +   +  A+K+ Q   GL  +G +D  T+  M  P       
Sbjct: 41  LTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKPRCSLPDV 100

Query: 176 LQVN-LMRIKK 185
           L V  L+R ++
Sbjct: 101 LGVAGLVRRRR 111


>gi|302876664|ref|YP_003845297.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|307687339|ref|ZP_07629785.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|302579521|gb|ADL53533.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
          Length = 444

 Score = 36.4 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G++   V+ ++  L  I +     P   +S  +D    + V+ FQ    L P+
Sbjct: 329 PGYTLGIGSTGQPVRTVQTFLNRIATNYPALPKVAVSGNYDVNTAAMVRKFQEVFNLQPT 388

Query: 155 GMVDSSTLEAM 165
           G+VD ST  A+
Sbjct: 389 GVVDYSTWYAI 399


>gi|116495981|ref|YP_807715.1| hypothetical protein LSEI_2550 [Lactobacillus casei ATCC 334]
 gi|239630380|ref|ZP_04673411.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301067531|ref|YP_003789554.1| hypothetical protein LCAZH_2513 [Lactobacillus casei str. Zhang]
 gi|116106131|gb|ABJ71273.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
           [Lactobacillus casei ATCC 334]
 gi|239526663|gb|EEQ65664.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300439938|gb|ADK19704.1| conserved hypothetical protein [Lactobacillus casei str. Zhang]
          Length = 456

 Score = 36.4 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            +G  YV V+        +++GKV + S ++ G+  + TP
Sbjct: 329 DIGNTYVEVSKEKQHEWYIKDGKVVMDSDIVTGKPGQDTP 368


>gi|227533041|ref|ZP_03963090.1| ErfK family protein [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227189442|gb|EEI69509.1| ErfK family protein [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 483

 Score = 36.4 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            +G  YV V+        +++GKV + S ++ G+  + TP
Sbjct: 356 DIGNTYVEVSKEKQHEWYIKDGKVVMDSDIVTGKPGQDTP 395


>gi|302531703|ref|ZP_07284045.1| predicted protein [Streptomyces sp. AA4]
 gi|302440598|gb|EFL12414.1| predicted protein [Streptomyces sp. AA4]
          Length = 220

 Score = 36.4 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 7/51 (13%)

Query: 186 LLEQKMG------LRYVL-VNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            L +           YVL V+  A  LE V++G      TV VG+    TP
Sbjct: 86  WLYRDDPRVDEARTPYVLRVDRAAYRLELVKDGATVRTWTVGVGKPVSPTP 136


>gi|191639460|ref|YP_001988626.1| hypothetical protein LCABL_27170 [Lactobacillus casei BL23]
 gi|190713762|emb|CAQ67768.1| Putative uncharacterized protein [Lactobacillus casei BL23]
 gi|205270979|emb|CAP07852.1| hypothetical protein [Lactobacillus casei BL23]
 gi|327383554|gb|AEA55030.1| ErfK/YbiS/YcfS/YnhG family protein [Lactobacillus casei LC2W]
 gi|327386745|gb|AEA58219.1| ErfK/YbiS/YcfS/YnhG family protein [Lactobacillus casei BD-II]
          Length = 456

 Score = 36.4 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            +G  YV V+        +++GKV + S ++ G+  + TP
Sbjct: 329 DIGNTYVEVSKEKQHEWYIKDGKVVMDSDIVTGKPGQDTP 368


>gi|18158443|ref|NP_542954.1| matrix metalloproteinase-16 [Rattus norvegicus]
 gi|2424973|dbj|BAA22223.1| MT3-MMP-del [Rattus sp.]
          Length = 547

 Score = 36.4 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|154295978|ref|XP_001548422.1| predicted protein [Botryotinia fuckeliana B05.10]
 gi|150843794|gb|EDN18987.1| predicted protein [Botryotinia fuckeliana B05.10]
          Length = 353

 Score = 36.4 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 23/56 (41%)

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
            L +   RF++S    V     +   +L +TP      +++ +K +KT       +
Sbjct: 217 DLLDRYRRFQSSSVTPVSQPDKIPQTVLAETPNKEIGDLKKALKEKKTRSQWFKKQ 272


>gi|148683759|gb|EDL15706.1| matrix metallopeptidase 28 (epilysin), isoform CRA_c [Mus musculus]
          Length = 529

 Score = 36.4 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 10/104 (9%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER----LIISGDL 124
             + + +A     ++     L    W     +P   G     +  LR+     L   G L
Sbjct: 25  TTTPQQLAAMVAGVSLLLRALPLLLWGCQDAQPTQHG-----LPELRQEAEAFLEKYGYL 79

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                 + A  A   +A++ FQ    L  SG++D +TL  M  P
Sbjct: 80  SEQGSKAPA-SAQFRNAIREFQWISQLPLSGVLDQATLRQMTRP 122


>gi|148683760|gb|EDL15707.1| matrix metallopeptidase 28 (epilysin), isoform CRA_d [Mus musculus]
          Length = 543

 Score = 36.4 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 10/104 (9%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER----LIISGDL 124
             + + +A     ++     L    W     +P   G     +  LR+     L   G L
Sbjct: 25  TTTPQQLAAMVAGVSLLLRALPLLLWGCQDAQPTQHG-----LPELRQEAEAFLEKYGYL 79

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                 + A  A   +A++ FQ    L  SG++D +TL  M  P
Sbjct: 80  SEQGSKAPA-SAQFRNAIREFQWISQLPLSGVLDQATLRQMTRP 122


>gi|227509795|ref|ZP_03939844.1| periplasmic protease [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190719|gb|EEI70786.1| periplasmic protease [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 344

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++     AV+ FQ RH L  +G V+ +T   +
Sbjct: 149 YNQATYHAVRQFQSRHHLKVTGNVNEAT--WL 178


>gi|218677376|ref|ZP_03525273.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium etli CIAT 894]
          Length = 220

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 48/156 (30%), Gaps = 44/156 (28%)

Query: 204 SLEAVEN-GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
            + A ++ G +       +G  D  +P     + R+ FNP +              +   
Sbjct: 96  QVFAYDSAGNLLAAYPASIGSTDTPSPSGTVTVERVAFNPGYT---------YNPKI--- 143

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
             + +  N  +++            W +   P +                          
Sbjct: 144 -NFQQGANDKILNIPPGPNGPVGTVWMALSKPTYG------------------------- 177

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           +H TPEP     + R ++ GC+R+ N    +L   +
Sbjct: 178 IHGTPEPS---KIGRTQSHGCIRLTNWDATELAQMV 210


>gi|206599740|ref|YP_002241929.1| gp34 [Mycobacterium phage Gumball]
 gi|206282954|gb|ACI06408.1| gp34 [Mycobacterium phage Gumball]
          Length = 327

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERL--IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           L +G+    V +++  +  +              F A  + AV  FQ R  +D  G V  
Sbjct: 178 LRIGSEGPEVLKMQRGMNSVFKNYRAMPLLEDGIFGAKTKEAVVEFQQRSLIDVDGEVGP 237

Query: 160 STLEAM 165
            T   +
Sbjct: 238 QTKAKL 243


>gi|269126589|ref|YP_003299959.1| glycoside hydrolase family 25 [Thermomonospora curvata DSM 43183]
 gi|268311547|gb|ACY97921.1| glycoside hydrolase family 25 [Thermomonospora curvata DSM 43183]
          Length = 297

 Score = 36.4 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 12/36 (33%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
                +    E   + FQ   GL   G+V   T  A
Sbjct: 255 AADGWYGPASERVCRAFQAEKGLAVDGVVGPVTWRA 290


>gi|109522603|ref|YP_655415.1| gp36 [Mycobacterium phage PLot]
 gi|109522811|ref|YP_655231.1| gp35 [Mycobacterium phage PBI1]
 gi|189043188|ref|YP_001936127.1| gp36 [Mycobacterium phage Adjutor]
 gi|206599654|ref|YP_002241533.1| gp35 [Mycobacterium phage Butterscotch]
 gi|88910524|gb|ABD58451.1| gp35 [Mycobacterium phage PBI1]
 gi|88910710|gb|ABD58635.1| gp36 [Mycobacterium phage PLot]
 gi|188090839|gb|ACD49621.1| gp36 [Mycobacterium phage Adjutor]
 gi|206282836|gb|ACI06323.1| gp35 [Mycobacterium phage Butterscotch]
          Length = 327

 Score = 36.4 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERL--IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           L +G+    V +++  +  +              F A  + AV  FQ R  +D  G V  
Sbjct: 178 LRIGSEGPEVLKMQRGMNSVFKNYRAMPLLEDGIFGAKTKEAVVEFQQRSLIDVDGEVGP 237

Query: 160 STLEAM 165
            T   +
Sbjct: 238 QTKAKL 243


>gi|330823136|ref|YP_004386439.1| peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans K601]
 gi|329308508|gb|AEB82923.1| Peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans K601]
          Length = 563

 Score = 36.4 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           V  FQ+  GL P G     TL  +N    ++  +L+
Sbjct: 525 VHQFQLGQGLTPDGQAGPLTLMLLNRAAGVQEPRLR 560


>gi|319761269|ref|YP_004125206.1| peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans BC]
 gi|317115830|gb|ADU98318.1| Peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans BC]
          Length = 563

 Score = 36.4 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           V  FQ+  GL P G     TL  +N    ++  +L+
Sbjct: 525 VHQFQLGQGLTPDGQAGPLTLMLLNRAAGVQEPRLR 560


>gi|237816230|ref|ZP_04595223.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus str. 2308 A]
 gi|237788297|gb|EEP62512.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus str. 2308 A]
          Length = 526

 Score = 36.4 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 45/151 (29%), Gaps = 45/151 (29%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           ENGK+ +     +G  D  +                  P  I+Q +    +  +P Y  +
Sbjct: 408 ENGKLVVAYPSTIGSSDNPS------------------PSGIVQVE---RIAINPNYTYN 446

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR-NNTYMHDTP 327
             I+       +V                    PG    + +  I           H TP
Sbjct: 447 PKINFKQGNNDKVLTI----------------PPGPNGPVGTVWIALSKPTYGI--HGTP 488

Query: 328 EPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            P     + +  + GCVR+ N    +L   +
Sbjct: 489 APS---RIGKISSHGCVRLTNWDAEELAKLV 516


>gi|332845157|ref|XP_001165615.2| PREDICTED: matrix metalloproteinase-25 [Pan troglodytes]
          Length = 562

 Score = 36.4 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P         +   +  A+K+ Q   GL  +G +D  T+  M+ P       
Sbjct: 36  LTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMHKPRCSLPDV 95

Query: 176 LQVN-LMRIKK 185
           L V  L+R ++
Sbjct: 96  LGVAGLVRRRR 106


>gi|206599830|ref|YP_002241449.1| gp35 [Mycobacterium phage Troll4]
 gi|206283072|gb|ACI06497.1| gp35 [Mycobacterium phage Troll4]
          Length = 327

 Score = 36.4 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERL--IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           L +G+    V +++  +  +              F A  + AV  FQ R  +D  G V  
Sbjct: 178 LRIGSEGPEVLKMQRGMNSVFKNYRAMPLLEDGIFGAKTKEAVVEFQQRSLIDVDGEVGP 237

Query: 160 STLEAM 165
            T   +
Sbjct: 238 QTKAKL 243


>gi|148683761|gb|EDL15708.1| matrix metallopeptidase 28 (epilysin), isoform CRA_e [Mus musculus]
          Length = 553

 Score = 36.4 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 10/104 (9%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER----LIISGDL 124
             + + +A     ++     L    W     +P   G     +  LR+     L   G L
Sbjct: 25  TTTPQQLAAMVAGVSLLLRALPLLLWGCQDAQPTQHG-----LPELRQEAEAFLEKYGYL 79

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                 + A  A   +A++ FQ    L  SG++D +TL  M  P
Sbjct: 80  SEQGSKAPA-SAQFRNAIREFQWISQLPLSGVLDQATLRQMTRP 122


>gi|207724810|ref|YP_002255207.1| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum MolK2]
 gi|206590035|emb|CAQ36996.1| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum MolK2]
          Length = 390

 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           N++  +QRL+++L   G  DP     +  D   + A++ +Q  H L   G    S L  +
Sbjct: 331 NNAADIQRLQQKLTDRGY-DPGTIDGIIGDRT-QQAIRAYQKDHQLPQDGYASRSLLARL 388


>gi|110635074|ref|YP_675282.1| lytic murein transglycosylase [Mesorhizobium sp. BNC1]
 gi|110286058|gb|ABG64117.1| lytic murein transglycosylase [Chelativorans sp. BNC1]
          Length = 407

 Score = 36.4 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            L++RL   G  +      V        A++ FQ R GL   G      L  +
Sbjct: 354 ELQKRLGTLGYYEGEIDGKVG--QASREAIRAFQSRMGLAQDGHPSKEVLNVL 404


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.157    0.510 

Lambda     K      H
   0.267   0.0477    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,373,497,837
Number of Sequences: 14124377
Number of extensions: 459855841
Number of successful extensions: 1159478
Number of sequences better than 10.0: 4355
Number of HSP's better than 10.0 without gapping: 3413
Number of HSP's successfully gapped in prelim test: 1840
Number of HSP's that attempted gapping in prelim test: 1146866
Number of HSP's gapped (non-prelim): 7213
length of query: 431
length of database: 4,842,793,630
effective HSP length: 142
effective length of query: 289
effective length of database: 2,837,132,096
effective search space: 819931175744
effective search space used: 819931175744
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 83 (36.4 bits)